symmetry/__init__.py

# This file was automatically generated by SWIG (https://www.swig.org).
# Version 4.3.1
#
# Do not make changes to this file unless you know what you are doing - modify
# the SWIG interface file instead.


# This wrapper is part of IMP,
# Copyright 2007-2025 IMP Inventors. All rights reserved.




from sys import version_info as _swig_python_version_info
import _IMP_symmetry

try:
    import builtins as __builtin__
except ImportError:
    import __builtin__

def _swig_repr(self):
    try:
        strthis = "proxy of " + self.this.__repr__()
    except __builtin__.Exception:
        strthis = ""
    return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)


def _swig_setattr_nondynamic_instance_variable(set):
    def set_instance_attr(self, name, value):
        if name == "this":
            set(self, name, value)
        elif name == "thisown":
            self.this.own(value)
        elif hasattr(self, name) and isinstance(getattr(type(self), name), property):
            set(self, name, value)
        else:
            raise AttributeError("You cannot add instance attributes to %s" % self)
    return set_instance_attr


def _swig_setattr_nondynamic_class_variable(set):
    def set_class_attr(cls, name, value):
        if hasattr(cls, name) and not isinstance(getattr(cls, name), property):
            set(cls, name, value)
        else:
            raise AttributeError("You cannot add class attributes to %s" % cls)
    return set_class_attr


def _swig_add_metaclass(metaclass):
    """Class decorator for adding a metaclass to a SWIG wrapped class - a slimmed down version of six.add_metaclass"""
    def wrapper(cls):
        return metaclass(cls.__name__, cls.__bases__, cls.__dict__.copy())
    return wrapper


class _SwigNonDynamicMeta(type):
    """Meta class to enforce nondynamic attributes (no new attributes) for a class"""
    __setattr__ = _swig_setattr_nondynamic_class_variable(type.__setattr__)


import weakref

class IMP_SYMMETRY_SwigPyIterator(object):
    r"""Proxy of C++ swig::IMP_SYMMETRY_SwigPyIterator class."""

    thisown = property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc="The membership flag")

    def __init__(self, *args, **kwargs):
        raise AttributeError("No constructor defined - class is abstract")
    __repr__ = _swig_repr
    __swig_destroy__ = _IMP_symmetry.delete_IMP_SYMMETRY_SwigPyIterator

    def value(self):
        r"""value(IMP_SYMMETRY_SwigPyIterator self) -> PyObject *"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator_value(self)

    def incr(self, n=1):
        r"""incr(IMP_SYMMETRY_SwigPyIterator self, size_t n=1) -> IMP_SYMMETRY_SwigPyIterator"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator_incr(self, n)

    def decr(self, n=1):
        r"""decr(IMP_SYMMETRY_SwigPyIterator self, size_t n=1) -> IMP_SYMMETRY_SwigPyIterator"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator_decr(self, n)

    def distance(self, x):
        r"""distance(IMP_SYMMETRY_SwigPyIterator self, IMP_SYMMETRY_SwigPyIterator x) -> ptrdiff_t"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator_distance(self, x)

    def equal(self, x):
        r"""equal(IMP_SYMMETRY_SwigPyIterator self, IMP_SYMMETRY_SwigPyIterator x) -> bool"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator_equal(self, x)

    def copy(self):
        r"""copy(IMP_SYMMETRY_SwigPyIterator self) -> IMP_SYMMETRY_SwigPyIterator"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator_copy(self)

    def next(self):
        r"""next(IMP_SYMMETRY_SwigPyIterator self) -> PyObject *"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator_next(self)

    def __next__(self):
        r"""__next__(IMP_SYMMETRY_SwigPyIterator self) -> PyObject *"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator___next__(self)

    def previous(self):
        r"""previous(IMP_SYMMETRY_SwigPyIterator self) -> PyObject *"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator_previous(self)

    def advance(self, n):
        r"""advance(IMP_SYMMETRY_SwigPyIterator self, ptrdiff_t n) -> IMP_SYMMETRY_SwigPyIterator"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator_advance(self, n)

    def __eq__(self, x):
        r"""__eq__(IMP_SYMMETRY_SwigPyIterator self, IMP_SYMMETRY_SwigPyIterator x) -> bool"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator___eq__(self, x)

    def __ne__(self, x):
        r"""__ne__(IMP_SYMMETRY_SwigPyIterator self, IMP_SYMMETRY_SwigPyIterator x) -> bool"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator___ne__(self, x)

    def __iadd__(self, n):
        r"""__iadd__(IMP_SYMMETRY_SwigPyIterator self, ptrdiff_t n) -> IMP_SYMMETRY_SwigPyIterator"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator___iadd__(self, n)

    def __isub__(self, n):
        r"""__isub__(IMP_SYMMETRY_SwigPyIterator self, ptrdiff_t n) -> IMP_SYMMETRY_SwigPyIterator"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator___isub__(self, n)

    def __add__(self, n):
        r"""__add__(IMP_SYMMETRY_SwigPyIterator self, ptrdiff_t n) -> IMP_SYMMETRY_SwigPyIterator"""
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator___add__(self, n)

    def __sub__(self, *args):
        r"""
        __sub__(IMP_SYMMETRY_SwigPyIterator self, ptrdiff_t n) -> IMP_SYMMETRY_SwigPyIterator
        __sub__(IMP_SYMMETRY_SwigPyIterator self, IMP_SYMMETRY_SwigPyIterator x) -> ptrdiff_t
        """
        return _IMP_symmetry.IMP_SYMMETRY_SwigPyIterator___sub__(self, *args)
    def __iter__(self):
        return self

# Register IMP_SYMMETRY_SwigPyIterator in _IMP_symmetry:
_IMP_symmetry.IMP_SYMMETRY_SwigPyIterator_swigregister(IMP_SYMMETRY_SwigPyIterator)

_value_types=[]
_object_types=[]
_raii_types=[]
_plural_types=[]

IMP_DEBUG = _IMP_symmetry.IMP_DEBUG

IMP_RELEASE = _IMP_symmetry.IMP_RELEASE

IMP_SILENT = _IMP_symmetry.IMP_SILENT

IMP_PROGRESS = _IMP_symmetry.IMP_PROGRESS

IMP_TERSE = _IMP_symmetry.IMP_TERSE

IMP_VERBOSE = _IMP_symmetry.IMP_VERBOSE

IMP_MEMORY = _IMP_symmetry.IMP_MEMORY

IMP_NONE = _IMP_symmetry.IMP_NONE

IMP_USAGE = _IMP_symmetry.IMP_USAGE

IMP_INTERNAL = _IMP_symmetry.IMP_INTERNAL

IMP_KERNEL_HAS_LOG4CXX = _IMP_symmetry.IMP_KERNEL_HAS_LOG4CXX

IMP_COMPILER_HAS_CEREAL_RAW_POINTER = _IMP_symmetry.IMP_COMPILER_HAS_CEREAL_RAW_POINTER

IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_symmetry.IMP_COMPILER_HAS_DEBUG_VECTOR

IMP_COMPILER_HAS_RANDOM_SHUFFLE = _IMP_symmetry.IMP_COMPILER_HAS_RANDOM_SHUFFLE

IMP_COMPILER_HAS_THREE_WAY = _IMP_symmetry.IMP_COMPILER_HAS_THREE_WAY

IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_symmetry.IMP_KERNEL_HAS_BOOST_RANDOM

IMP_KERNEL_HAS_NUMPY = _IMP_symmetry.IMP_KERNEL_HAS_NUMPY

IMP_KERNEL_HAS_BOOST_SYSTEM = _IMP_symmetry.IMP_KERNEL_HAS_BOOST_SYSTEM

IMP_KERNEL_HAS_GPERFTOOLS = _IMP_symmetry.IMP_KERNEL_HAS_GPERFTOOLS

IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_symmetry.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER

IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_symmetry.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER

IMPKERNEL_SHOW_WARNINGS = _IMP_symmetry.IMPKERNEL_SHOW_WARNINGS


import sys
class _DirectorObjects:
    """@internal Simple class to keep references to director objects
       to prevent premature deletion."""
    def __init__(self):
        self._objects = []
    def register(self, obj):
        """Take a reference to a director object; will only work for
           refcounted C++ classes"""
        if hasattr(obj, 'get_ref_count'):
            self._objects.append(obj)
    def cleanup(self):
        """Only drop our reference and allow cleanup by Python if no other
           Python references exist (we hold 3 references: one in self._objects,
           one in x, and one in the argument list for getrefcount) *and* no
           other C++ references exist (the Python object always holds one)"""
        objs = [x for x in self._objects if sys.getrefcount(x) > 3 \
                                         or x.get_ref_count() > 1]
# Do in two steps so the references are kept until the end of the
# function (deleting references may trigger a fresh call to this method)
        self._objects = objs
    def get_object_count(self):
        """Get number of director objects (useful for testing only)"""
        return len(self._objects)
_director_objects = _DirectorObjects()

class _ostream(object):
    r"""Proxy of C++ std::ostream class."""

    thisown = property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc="The membership flag")

    def __init__(self, *args, **kwargs):
        raise AttributeError("No constructor defined")
    __repr__ = _swig_repr

    def write(self, osa_buf):
        r"""write(_ostream self, char const * osa_buf)"""
        return _IMP_symmetry._ostream_write(self, osa_buf)

# Register _ostream in _IMP_symmetry:
_IMP_symmetry._ostream_swigregister(_ostream)
IMP_C_OPEN_BINARY = _IMP_symmetry.IMP_C_OPEN_BINARY

import IMP
IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_symmetry.IMP_CGAL_HAS_BOOST_FILESYSTEM

IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_symmetry.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS

IMP_CGAL_HAS_BOOST_RANDOM = _IMP_symmetry.IMP_CGAL_HAS_BOOST_RANDOM

IMP_CGAL_HAS_NUMPY = _IMP_symmetry.IMP_CGAL_HAS_NUMPY

IMPCGAL_SHOW_WARNINGS = _IMP_symmetry.IMPCGAL_SHOW_WARNINGS

import IMP.cgal
IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_symmetry.IMP_ALGEBRA_HAS_IMP_CGAL

IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_symmetry.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM

IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_symmetry.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS

IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_symmetry.IMP_ALGEBRA_HAS_BOOST_RANDOM

IMP_ALGEBRA_HAS_CGAL = _IMP_symmetry.IMP_ALGEBRA_HAS_CGAL

IMP_ALGEBRA_HAS_NUMPY = _IMP_symmetry.IMP_ALGEBRA_HAS_NUMPY

IMP_ALGEBRA_HAS_ANN = _IMP_symmetry.IMP_ALGEBRA_HAS_ANN

IMPALGEBRA_SHOW_WARNINGS = _IMP_symmetry.IMPALGEBRA_SHOW_WARNINGS

import IMP.algebra
IMP_DISPLAY_HAS_IMP_CGAL = _IMP_symmetry.IMP_DISPLAY_HAS_IMP_CGAL

IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_symmetry.IMP_DISPLAY_HAS_BOOST_FILESYSTEM

IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_symmetry.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS

IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_symmetry.IMP_DISPLAY_HAS_BOOST_RANDOM

IMP_DISPLAY_HAS_CGAL = _IMP_symmetry.IMP_DISPLAY_HAS_CGAL

IMP_DISPLAY_HAS_NUMPY = _IMP_symmetry.IMP_DISPLAY_HAS_NUMPY

IMPDISPLAY_SHOW_WARNINGS = _IMP_symmetry.IMPDISPLAY_SHOW_WARNINGS

import IMP.display
IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_symmetry.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL

IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_symmetry.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM

IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_symmetry.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS

IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_symmetry.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM

IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_symmetry.IMP_SCORE_FUNCTOR_HAS_CGAL

IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_symmetry.IMP_SCORE_FUNCTOR_HAS_HDF5

IMP_SCORE_FUNCTOR_HAS_NUMPY = _IMP_symmetry.IMP_SCORE_FUNCTOR_HAS_NUMPY

IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_symmetry.IMPSCOREFUNCTOR_SHOW_WARNINGS

import IMP.score_functor
IMP_CORE_HAS_IMP_CGAL = _IMP_symmetry.IMP_CORE_HAS_IMP_CGAL

IMP_CORE_HAS_IMP_KERNEL = _IMP_symmetry.IMP_CORE_HAS_IMP_KERNEL

IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_symmetry.IMP_CORE_HAS_BOOST_FILESYSTEM

IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_symmetry.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS

IMP_CORE_HAS_BOOST_RANDOM = _IMP_symmetry.IMP_CORE_HAS_BOOST_RANDOM

IMP_CORE_HAS_CGAL = _IMP_symmetry.IMP_CORE_HAS_CGAL

IMP_CORE_HAS_HDF5 = _IMP_symmetry.IMP_CORE_HAS_HDF5

IMP_CORE_HAS_NUMPY = _IMP_symmetry.IMP_CORE_HAS_NUMPY

IMPCORE_SHOW_WARNINGS = _IMP_symmetry.IMPCORE_SHOW_WARNINGS

import IMP.core
IMP_SYMMETRY_HAS_IMP_CGAL = _IMP_symmetry.IMP_SYMMETRY_HAS_IMP_CGAL

IMP_SYMMETRY_HAS_IMP_DISPLAY = _IMP_symmetry.IMP_SYMMETRY_HAS_IMP_DISPLAY

IMP_SYMMETRY_HAS_IMP_KERNEL = _IMP_symmetry.IMP_SYMMETRY_HAS_IMP_KERNEL

IMP_SYMMETRY_HAS_IMP_SCORE_FUNCTOR = _IMP_symmetry.IMP_SYMMETRY_HAS_IMP_SCORE_FUNCTOR

IMP_SYMMETRY_HAS_BOOST_FILESYSTEM = _IMP_symmetry.IMP_SYMMETRY_HAS_BOOST_FILESYSTEM

IMP_SYMMETRY_HAS_BOOST_PROGRAMOPTIONS = _IMP_symmetry.IMP_SYMMETRY_HAS_BOOST_PROGRAMOPTIONS

IMP_SYMMETRY_HAS_BOOST_RANDOM = _IMP_symmetry.IMP_SYMMETRY_HAS_BOOST_RANDOM

IMP_SYMMETRY_HAS_CGAL = _IMP_symmetry.IMP_SYMMETRY_HAS_CGAL

IMP_SYMMETRY_HAS_HDF5 = _IMP_symmetry.IMP_SYMMETRY_HAS_HDF5

IMP_SYMMETRY_HAS_NUMPY = _IMP_symmetry.IMP_SYMMETRY_HAS_NUMPY

IMP_SYMMETRY_HAS_PYTHON_IHM = _IMP_symmetry.IMP_SYMMETRY_HAS_PYTHON_IHM

IMPSYMMETRY_SHOW_WARNINGS = _IMP_symmetry.IMPSYMMETRY_SHOW_WARNINGS


_object_types.append("BallMover")


_object_types.append("RigidBodyMover")

class BallMover(IMP.core.MonteCarloMover):
    r"""Proxy of C++ IMP::symmetry::BallMover class."""

    thisown = property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc="The membership flag")

    def __init__(self, p, ps, max_tr, ctrs, trs):
        r"""__init__(BallMover self, Particle p, IMP::Particles ps, IMP::Float max_tr, IMP::algebra::Vector3Ds ctrs, IMP::algebra::Transformation3Ds trs) -> BallMover"""
        _IMP_symmetry.BallMover_swiginit(self, _IMP_symmetry.new_BallMover(p, ps, max_tr, ctrs, trs))

    def get_version_info(self):
        r"""get_version_info(BallMover self) -> VersionInfo"""
        return _IMP_symmetry.BallMover_get_version_info(self)
    __swig_destroy__ = _IMP_symmetry.delete_BallMover

    def __str__(self):
        r"""__str__(BallMover self) -> std::string"""
        return _IMP_symmetry.BallMover___str__(self)

    def __repr__(self):
        r"""__repr__(BallMover self) -> std::string"""
        return _IMP_symmetry.BallMover___repr__(self)

    @staticmethod
    def get_from(o):
       return _object_cast_to_BallMover(o)


# Register BallMover in _IMP_symmetry:
_IMP_symmetry.BallMover_swigregister(BallMover)
class RigidBodyMover(IMP.core.MonteCarloMover):
    r"""Proxy of C++ IMP::symmetry::RigidBodyMover class."""

    thisown = property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc="The membership flag")

    def __init__(self, d, ps, max_tr, max_ang, ctrs, trs):
        r"""__init__(RigidBodyMover self, RigidBody d, IMP::Particles ps, IMP::Float max_tr, IMP::Float max_ang, IMP::algebra::Vector3Ds ctrs, IMP::algebra::Transformation3Ds trs) -> RigidBodyMover"""
        _IMP_symmetry.RigidBodyMover_swiginit(self, _IMP_symmetry.new_RigidBodyMover(d, ps, max_tr, max_ang, ctrs, trs))

    def get_version_info(self):
        r"""get_version_info(RigidBodyMover self) -> VersionInfo"""
        return _IMP_symmetry.RigidBodyMover_get_version_info(self)
    __swig_destroy__ = _IMP_symmetry.delete_RigidBodyMover

    def __str__(self):
        r"""__str__(RigidBodyMover self) -> std::string"""
        return _IMP_symmetry.RigidBodyMover___str__(self)

    def __repr__(self):
        r"""__repr__(RigidBodyMover self) -> std::string"""
        return _IMP_symmetry.RigidBodyMover___repr__(self)

    @staticmethod
    def get_from(o):
       return _object_cast_to_RigidBodyMover(o)


# Register RigidBodyMover in _IMP_symmetry:
_IMP_symmetry.RigidBodyMover_swigregister(RigidBodyMover)

def get_module_name():
    r"""get_module_name() -> std::string const"""
    return _IMP_symmetry.get_module_name()

def get_module_version():
    r"""get_module_version() -> std::string const"""
    return _IMP_symmetry.get_module_version()

def get_example_path(fname):
    r"""get_example_path(std::string fname) -> std::string"""
    return _IMP_symmetry.get_example_path(fname)

def get_data_path(fname):
    r"""get_data_path(std::string fname) -> std::string"""
    return _IMP_symmetry.get_data_path(fname)

from . import _version_check
_version_check.check_version(get_module_version())
__version__ = get_module_version()