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IMP Reference Guide  develop.4390929e3e,2024/11/11
The Integrative Modeling Platform
density_map_volumetrics.h File Reference

Classes and functions to handle volumetric properties in Density maps. More...

#include <IMP/em/em_config.h>
#include <IMP/em/DensityMap.h>
#include <IMP/base_types.h>
#include <IMP/atom/estimates.h>
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Go to the source code of this file.

Namespaces

 IMP
 Base functionality and abstract base classes for representation, scoring and sampling.
 
 IMP::em
 Basic utilities for handling cryo-electron microscopy 3D density maps.
 

Functions

Float IMP::em::get_molecular_mass_at_threshold (DensityMap *m, Float threshold, atom::ProteinDensityReference ref=atom::HARPAZ)
 Compute an approximate molecular mass. More...
 
Float IMP::em::get_threshold_for_approximate_mass (DensityMap *m, Float desired_mass, atom::ProteinDensityReference ref=atom::HARPAZ)
 Computes the threshold to consider in an EM map to get a desired mass. More...
 
Float IMP::em::get_threshold_for_approximate_volume (DensityMap *m, Float desired_volume)
 Computes the threshold consider in an EM map to get a desired volume. More...
 
Float IMP::em::get_volume_at_threshold (DensityMap *m, Float threshold)
 Compute an approximate volume. More...
 

Detailed Description

Classes and functions to handle volumetric properties in Density maps.

Definition in file density_map_volumetrics.h.