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IMP Reference Guide
develop.7bfed8c07c,2024/04/27
The Integrative Modeling Platform
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This is the complete list of members for IMP::npctransport::LinearInteractionPairScore, including all inherited members.
| Argument typedef (defined in IMP::PairScore) | IMP::PairScore | |
| clear_caches() | IMP::Object | virtual |
| create_current_decomposition(Model *m, const ParticleIndexPair &vt) const | IMP::PairScore | |
| do_create_current_decomposition(Model *m, const ParticleIndexPair &vt) const | IMP::PairScore | protectedvirtual |
| do_destroy() | IMP::Object | protectedvirtual |
| do_get_inputs(Model *m, const ParticleIndexes &pis) const override | IMP::npctransport::LinearInteractionPairScore | virtual |
| evaluate_if_good_index(Model *m, const ParticleIndexPairs &p, DerivativeAccumulator *da, double max, unsigned int lower_bound, unsigned int upper_bound) const (defined in IMP::npctransport::LinearInteractionPairScore) | IMP::npctransport::LinearInteractionPairScore | |
| IMP::PairScore::evaluate_if_good_index(Model *m, const ParticleIndexPair &vt, DerivativeAccumulator *da, double max) const | IMP::PairScore | virtual |
| evaluate_if_good_indexes(Model *m, const ParticleIndexPairs &o, DerivativeAccumulator *da, double max, unsigned int lower_bound, unsigned int upper_bound) const | IMP::PairScore | virtual |
| evaluate_index(algebra::Sphere3D const &s0, algebra::Sphere3D const &s1, algebra::Sphere3D &ds0, algebra::Sphere3D &ds1, DerivativeAccumulator *da) const | IMP::npctransport::LinearInteractionPairScore | protected |
| IMP::PairScore::evaluate_index(Model *m, const ParticleIndexPair &vt, DerivativeAccumulator *da) const =0 | IMP::PairScore | pure virtual |
| evaluate_indexes(Model *m, const ParticleIndexPairs &pips, DerivativeAccumulator *da, unsigned int lower_bound, unsigned int upper_bound) const override | IMP::npctransport::LinearInteractionPairScore | virtual |
| evaluate_indexes_delta(Model *m, const ParticleIndexPairs &o, DerivativeAccumulator *da, const std::vector< unsigned > &indexes, std::vector< double > &score) const | IMP::PairScore | virtual |
| evaluate_indexes_scores(Model *m, const ParticleIndexPairs &o, DerivativeAccumulator *da, unsigned int lower_bound, unsigned int upper_bound, std::vector< double > &score) const | IMP::PairScore | virtual |
| get_check_level() const (defined in IMP::Object) | IMP::Object | |
| get_evaluation_cache() const (defined in IMP::npctransport::LinearInteractionPairScore) | IMP::npctransport::LinearInteractionPairScore | |
| get_inputs(Model *m, const ParticleIndexes &pis) const | IMP::ParticleInputs | |
| get_k_attraction() const | IMP::npctransport::LinearInteractionPairScore | |
| get_k_repulsion() const | IMP::npctransport::LinearInteractionPairScore | |
| get_log_level() const (defined in IMP::Object) | IMP::Object | |
| get_name() const (defined in IMP::Object) | IMP::Object | |
| get_range_attraction() const | IMP::npctransport::LinearInteractionPairScore | |
| get_type_name() const override (defined in IMP::npctransport::LinearInteractionPairScore) | IMP::npctransport::LinearInteractionPairScore | virtual |
| get_version_info() const override | IMP::npctransport::LinearInteractionPairScore | virtual |
| IndexArgument typedef (defined in IMP::PairScore) | IMP::PairScore | |
| LinearInteractionPairScore(double k_rep, double range_attr, double k_attr, std::string name="LinearIDPairScore%1%") | IMP::npctransport::LinearInteractionPairScore | |
| Modifier typedef (defined in IMP::PairScore) | IMP::PairScore | |
| NonCopyable() (defined in IMP::NonCopyable) | IMP::NonCopyable | protected |
| Object(std::string name) | IMP::Object | protected |
| PairScore(std::string name="PairScore %1%") (defined in IMP::PairScore) | IMP::PairScore | |
| PassArgument typedef (defined in IMP::PairScore) | IMP::PairScore | |
| PassIndexArgument typedef (defined in IMP::PairScore) | IMP::PairScore | |
| set_check_level(CheckLevel l) | IMP::Object | |
| set_k_attraction(double k_attr) | IMP::npctransport::LinearInteractionPairScore | |
| set_k_repulsion(double k_rep) | IMP::npctransport::LinearInteractionPairScore | |
| set_log_level(LogLevel l) | IMP::Object | |
| set_name(std::string name) (defined in IMP::Object) | IMP::Object | |
| set_was_used(bool tf) const | IMP::Object | |
| show(std::ostream &out=std::cout) const (defined in IMP::Object) | IMP::Object | |
| ~LinearInteractionPairScore() (defined in IMP::npctransport::LinearInteractionPairScore) | IMP::npctransport::LinearInteractionPairScore | virtual |
| ~Object() (defined in IMP::Object) | IMP::Object | virtual |
| ~ParticleInputs() (defined in IMP::ParticleInputs) | IMP::ParticleInputs | protectedvirtual |