14 from sys
import version_info
as _swig_python_version_info
18 import builtins
as __builtin__
24 strthis =
"proxy of " + self.this.__repr__()
25 except __builtin__.Exception:
27 return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
30 def _swig_setattr_nondynamic_instance_variable(set):
31 def set_instance_attr(self, name, value):
33 set(self, name, value)
34 elif name ==
"thisown":
36 elif hasattr(self, name)
and isinstance(getattr(type(self), name), property):
37 set(self, name, value)
39 raise AttributeError(
"You cannot add instance attributes to %s" % self)
40 return set_instance_attr
43 def _swig_setattr_nondynamic_class_variable(set):
44 def set_class_attr(cls, name, value):
45 if hasattr(cls, name)
and not isinstance(getattr(cls, name), property):
48 raise AttributeError(
"You cannot add class attributes to %s" % cls)
52 def _swig_add_metaclass(metaclass):
53 """Class decorator for adding a metaclass to a SWIG wrapped class - a slimmed down version of six.add_metaclass"""
55 return metaclass(cls.__name__, cls.__bases__, cls.__dict__.copy())
59 class _SwigNonDynamicMeta(type):
60 """Meta class to enforce nondynamic attributes (no new attributes) for a class"""
61 __setattr__ = _swig_setattr_nondynamic_class_variable(type.__setattr__)
66 class IMP_ALGEBRA_SwigPyIterator(object):
67 r"""Proxy of C++ swig::IMP_ALGEBRA_SwigPyIterator class."""
69 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
71 def __init__(self, *args, **kwargs):
72 raise AttributeError(
"No constructor defined - class is abstract")
74 __swig_destroy__ = _IMP_algebra.delete_IMP_ALGEBRA_SwigPyIterator
77 r"""value(IMP_ALGEBRA_SwigPyIterator self) -> PyObject *"""
78 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_value(self)
81 r"""incr(IMP_ALGEBRA_SwigPyIterator self, size_t n=1) -> IMP_ALGEBRA_SwigPyIterator"""
82 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_incr(self, n)
85 r"""decr(IMP_ALGEBRA_SwigPyIterator self, size_t n=1) -> IMP_ALGEBRA_SwigPyIterator"""
86 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_decr(self, n)
88 def distance(self, x):
89 r"""distance(IMP_ALGEBRA_SwigPyIterator self, IMP_ALGEBRA_SwigPyIterator x) -> ptrdiff_t"""
90 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_distance(self, x)
93 r"""equal(IMP_ALGEBRA_SwigPyIterator self, IMP_ALGEBRA_SwigPyIterator x) -> bool"""
94 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_equal(self, x)
97 r"""copy(IMP_ALGEBRA_SwigPyIterator self) -> IMP_ALGEBRA_SwigPyIterator"""
98 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_copy(self)
101 r"""next(IMP_ALGEBRA_SwigPyIterator self) -> PyObject *"""
102 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_next(self)
105 r"""__next__(IMP_ALGEBRA_SwigPyIterator self) -> PyObject *"""
106 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___next__(self)
109 r"""previous(IMP_ALGEBRA_SwigPyIterator self) -> PyObject *"""
110 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_previous(self)
112 def advance(self, n):
113 r"""advance(IMP_ALGEBRA_SwigPyIterator self, ptrdiff_t n) -> IMP_ALGEBRA_SwigPyIterator"""
114 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_advance(self, n)
117 r"""__eq__(IMP_ALGEBRA_SwigPyIterator self, IMP_ALGEBRA_SwigPyIterator x) -> bool"""
118 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___eq__(self, x)
121 r"""__ne__(IMP_ALGEBRA_SwigPyIterator self, IMP_ALGEBRA_SwigPyIterator x) -> bool"""
122 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___ne__(self, x)
124 def __iadd__(self, n):
125 r"""__iadd__(IMP_ALGEBRA_SwigPyIterator self, ptrdiff_t n) -> IMP_ALGEBRA_SwigPyIterator"""
126 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___iadd__(self, n)
128 def __isub__(self, n):
129 r"""__isub__(IMP_ALGEBRA_SwigPyIterator self, ptrdiff_t n) -> IMP_ALGEBRA_SwigPyIterator"""
130 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___isub__(self, n)
132 def __add__(self, n):
133 r"""__add__(IMP_ALGEBRA_SwigPyIterator self, ptrdiff_t n) -> IMP_ALGEBRA_SwigPyIterator"""
134 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___add__(self, n)
136 def __sub__(self, *args):
138 __sub__(IMP_ALGEBRA_SwigPyIterator self, ptrdiff_t n) -> IMP_ALGEBRA_SwigPyIterator
139 __sub__(IMP_ALGEBRA_SwigPyIterator self, IMP_ALGEBRA_SwigPyIterator x) -> ptrdiff_t
141 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___sub__(self, *args)
146 _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_swigregister(IMP_ALGEBRA_SwigPyIterator)
153 IMP_DEBUG = _IMP_algebra.IMP_DEBUG
155 IMP_RELEASE = _IMP_algebra.IMP_RELEASE
157 IMP_SILENT = _IMP_algebra.IMP_SILENT
159 IMP_PROGRESS = _IMP_algebra.IMP_PROGRESS
161 IMP_TERSE = _IMP_algebra.IMP_TERSE
163 IMP_VERBOSE = _IMP_algebra.IMP_VERBOSE
165 IMP_MEMORY = _IMP_algebra.IMP_MEMORY
167 IMP_NONE = _IMP_algebra.IMP_NONE
169 IMP_USAGE = _IMP_algebra.IMP_USAGE
171 IMP_INTERNAL = _IMP_algebra.IMP_INTERNAL
173 IMP_KERNEL_HAS_LOG4CXX = _IMP_algebra.IMP_KERNEL_HAS_LOG4CXX
175 IMP_COMPILER_HAS_CEREAL_RAW_POINTER = _IMP_algebra.IMP_COMPILER_HAS_CEREAL_RAW_POINTER
177 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_algebra.IMP_COMPILER_HAS_DEBUG_VECTOR
179 IMP_COMPILER_HAS_RANDOM_SHUFFLE = _IMP_algebra.IMP_COMPILER_HAS_RANDOM_SHUFFLE
181 IMP_COMPILER_HAS_THREE_WAY = _IMP_algebra.IMP_COMPILER_HAS_THREE_WAY
183 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_algebra.IMP_KERNEL_HAS_BOOST_RANDOM
185 IMP_KERNEL_HAS_NUMPY = _IMP_algebra.IMP_KERNEL_HAS_NUMPY
187 IMP_KERNEL_HAS_BOOST_SYSTEM = _IMP_algebra.IMP_KERNEL_HAS_BOOST_SYSTEM
189 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_algebra.IMP_KERNEL_HAS_GPERFTOOLS
191 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_algebra.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
193 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_algebra.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
195 IMPKERNEL_SHOW_WARNINGS = _IMP_algebra.IMPKERNEL_SHOW_WARNINGS
199 class _DirectorObjects:
200 """@internal Simple class to keep references to director objects
201 to prevent premature deletion."""
204 def register(self, obj):
205 """Take a reference to a director object; will only work for
206 refcounted C++ classes"""
207 if hasattr(obj,
'get_ref_count'):
208 self._objects.append(obj)
210 """Only drop our reference and allow cleanup by Python if no other
211 Python references exist (we hold 3 references: one in self._objects,
212 one in x, and one in the argument list for getrefcount) *and* no
213 other C++ references exist (the Python object always holds one)"""
214 objs = [x
for x
in self._objects
if sys.getrefcount(x) > 3 \
215 or x.get_ref_count() > 1]
219 def get_object_count(self):
220 """Get number of director objects (useful for testing only)"""
221 return len(self._objects)
222 _director_objects = _DirectorObjects()
224 class _ostream(object):
225 r"""Proxy of C++ std::ostream class."""
227 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
229 def __init__(self, *args, **kwargs):
230 raise AttributeError(
"No constructor defined")
231 __repr__ = _swig_repr
233 def write(self, osa_buf):
234 r"""write(_ostream self, char const * osa_buf)"""
235 return _IMP_algebra._ostream_write(self, osa_buf)
238 _IMP_algebra._ostream_swigregister(_ostream)
239 IMP_C_OPEN_BINARY = _IMP_algebra.IMP_C_OPEN_BINARY
242 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_algebra.IMP_CGAL_HAS_BOOST_FILESYSTEM
244 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_algebra.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
246 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_algebra.IMP_CGAL_HAS_BOOST_RANDOM
248 IMP_CGAL_HAS_NUMPY = _IMP_algebra.IMP_CGAL_HAS_NUMPY
250 IMPCGAL_SHOW_WARNINGS = _IMP_algebra.IMPCGAL_SHOW_WARNINGS
253 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_algebra.IMP_ALGEBRA_HAS_IMP_CGAL
255 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_algebra.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
257 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_algebra.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
259 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_algebra.IMP_ALGEBRA_HAS_BOOST_RANDOM
261 IMP_ALGEBRA_HAS_CGAL = _IMP_algebra.IMP_ALGEBRA_HAS_CGAL
263 IMP_ALGEBRA_HAS_NUMPY = _IMP_algebra.IMP_ALGEBRA_HAS_NUMPY
265 IMP_ALGEBRA_HAS_ANN = _IMP_algebra.IMP_ALGEBRA_HAS_ANN
267 IMPALGEBRA_SHOW_WARNINGS = _IMP_algebra.IMPALGEBRA_SHOW_WARNINGS
272 return v.get_coordinates()
277 return v.get_sphere()
282 _object_types.append(
"VectorKDMetric")
285 def _object_cast_to_VectorKDMetric(o):
286 r"""_object_cast_to_VectorKDMetric(Object o) -> VectorKDMetric"""
287 return _IMP_algebra._object_cast_to_VectorKDMetric(o)
289 _object_types.append(
"EuclideanVectorKDMetric")
292 def _object_cast_to_EuclideanVectorKDMetric(o):
293 r"""_object_cast_to_EuclideanVectorKDMetric(Object o) -> EuclideanVectorKDMetric"""
294 return _IMP_algebra._object_cast_to_EuclideanVectorKDMetric(o)
296 _object_types.append(
"MaxVectorKDMetric")
299 def _object_cast_to_MaxVectorKDMetric(o):
300 r"""_object_cast_to_MaxVectorKDMetric(Object o) -> MaxVectorKDMetric"""
301 return _IMP_algebra._object_cast_to_MaxVectorKDMetric(o)
303 _object_types.append(
"DynamicNearestNeighbor3D")
306 def _object_cast_to_DynamicNearestNeighbor3D(o):
307 r"""_object_cast_to_DynamicNearestNeighbor3D(Object o) -> DynamicNearestNeighbor3D"""
308 return _IMP_algebra._object_cast_to_DynamicNearestNeighbor3D(o)
311 _plural_types.append(
"Rotation2Ds")
312 _value_types.append(
"Rotation2D")
316 _plural_types.append(
"Rotation3Ds")
317 _value_types.append(
"Rotation3D")
321 _plural_types.append(
"Reflection3Ds")
322 _value_types.append(
"Reflection3D")
325 Transformation2Ds=list
326 _plural_types.append(
"Transformation2Ds")
327 _value_types.append(
"Transformation2D")
330 Transformation3Ds=list
331 _plural_types.append(
"Transformation3Ds")
332 _value_types.append(
"Transformation3D")
335 SphericalVector3Ds=list
336 _plural_types.append(
"SphericalVector3Ds")
337 _value_types.append(
"SphericalVector3D")
341 _plural_types.append(
"Triangle3Ds")
342 _value_types.append(
"Triangle3D")
346 _plural_types.append(
"Cone3Ds")
347 _value_types.append(
"Cone3D")
351 _plural_types.append(
"Cylinder3Ds")
352 _value_types.append(
"Cylinder3D")
356 _plural_types.append(
"Ellipsoid3Ds")
357 _value_types.append(
"Ellipsoid3D")
361 _plural_types.append(
"Line3Ds")
362 _value_types.append(
"Line3D")
366 _plural_types.append(
"Plane3Ds")
367 _value_types.append(
"Plane3D")
371 _plural_types.append(
"Segment3Ds")
372 _value_types.append(
"Segment3D")
376 _plural_types.append(
"SpherePatch3Ds")
377 _value_types.append(
"SpherePatch3D")
380 ConnollySurfacePoints=list
381 _plural_types.append(
"ConnollySurfacePoints")
382 _value_types.append(
"ConnollySurfacePoint")
386 _plural_types.append(
"Sphere1Ds")
387 _value_types.append(
"Sphere1D")
391 _plural_types.append(
"Sphere2Ds")
392 _value_types.append(
"Sphere2D")
396 _plural_types.append(
"Sphere3Ds")
397 _value_types.append(
"Sphere3D")
401 _plural_types.append(
"Sphere4Ds")
402 _value_types.append(
"Sphere4D")
406 _plural_types.append(
"Sphere5Ds")
407 _value_types.append(
"Sphere5D")
411 _plural_types.append(
"Sphere6Ds")
412 _value_types.append(
"Sphere6D")
416 _plural_types.append(
"Sphere1Ds")
417 _value_types.append(
"SphereD<1>")
421 _plural_types.append(
"Sphere2Ds")
422 _value_types.append(
"SphereD<2>")
426 _plural_types.append(
"Sphere3Ds")
427 _value_types.append(
"SphereD<3>")
431 _plural_types.append(
"Sphere4Ds")
432 _value_types.append(
"SphereD<4>")
436 _plural_types.append(
"Sphere5Ds")
437 _value_types.append(
"SphereD<5>")
441 _plural_types.append(
"Sphere6Ds")
442 _value_types.append(
"SphereD<6>")
446 _plural_types.append(
"SphereKDs")
447 _value_types.append(
"SphereKD")
451 _plural_types.append(
"SphereKDs")
452 _value_types.append(
"SphereD<-1>")
456 _plural_types.append(
"UnitSimplex1Ds")
457 _value_types.append(
"UnitSimplex1D")
461 _plural_types.append(
"UnitSimplex2Ds")
462 _value_types.append(
"UnitSimplex2D")
466 _plural_types.append(
"UnitSimplex3Ds")
467 _value_types.append(
"UnitSimplex3D")
471 _plural_types.append(
"UnitSimplex4Ds")
472 _value_types.append(
"UnitSimplex4D")
476 _plural_types.append(
"UnitSimplex5Ds")
477 _value_types.append(
"UnitSimplex5D")
481 _plural_types.append(
"UnitSimplex6Ds")
482 _value_types.append(
"UnitSimplex6D")
486 _plural_types.append(
"UnitSimplex1Ds")
487 _value_types.append(
"UnitSimplexD<1>")
491 _plural_types.append(
"UnitSimplex2Ds")
492 _value_types.append(
"UnitSimplexD<2>")
496 _plural_types.append(
"UnitSimplex3Ds")
497 _value_types.append(
"UnitSimplexD<3>")
501 _plural_types.append(
"UnitSimplex4Ds")
502 _value_types.append(
"UnitSimplexD<4>")
506 _plural_types.append(
"UnitSimplex5Ds")
507 _value_types.append(
"UnitSimplexD<5>")
511 _plural_types.append(
"UnitSimplex6Ds")
512 _value_types.append(
"UnitSimplexD<6>")
516 _plural_types.append(
"UnitSimplexKDs")
517 _value_types.append(
"UnitSimplexKD")
521 _plural_types.append(
"UnitSimplexKDs")
522 _value_types.append(
"UnitSimplexD<-1>")
526 _plural_types.append(
"BoundingBox1Ds")
527 _value_types.append(
"BoundingBox1D")
531 _plural_types.append(
"BoundingBox2Ds")
532 _value_types.append(
"BoundingBox2D")
536 _plural_types.append(
"BoundingBox3Ds")
537 _value_types.append(
"BoundingBox3D")
541 _plural_types.append(
"BoundingBox4Ds")
542 _value_types.append(
"BoundingBox4D")
546 _plural_types.append(
"BoundingBox5Ds")
547 _value_types.append(
"BoundingBox5D")
551 _plural_types.append(
"BoundingBox6Ds")
552 _value_types.append(
"BoundingBox6D")
556 _plural_types.append(
"BoundingBox1Ds")
557 _value_types.append(
"BoundingBoxD<1>")
561 _plural_types.append(
"BoundingBox2Ds")
562 _value_types.append(
"BoundingBoxD<2>")
566 _plural_types.append(
"BoundingBox3Ds")
567 _value_types.append(
"BoundingBoxD<3>")
571 _plural_types.append(
"BoundingBox4Ds")
572 _value_types.append(
"BoundingBoxD<4>")
576 _plural_types.append(
"BoundingBox5Ds")
577 _value_types.append(
"BoundingBoxD<5>")
581 _plural_types.append(
"BoundingBox6Ds")
582 _value_types.append(
"BoundingBoxD<6>")
586 _plural_types.append(
"BoundingBoxKDs")
587 _value_types.append(
"BoundingBoxKD")
591 _plural_types.append(
"BoundingBoxKDs")
592 _value_types.append(
"BoundingBoxD<-1>")
595 PrincipalComponentAnalysis1Ds=list
596 _plural_types.append(
"PrincipalComponentAnalysis1Ds")
597 _value_types.append(
"PrincipalComponentAnalysis1D")
600 PrincipalComponentAnalysis2Ds=list
601 _plural_types.append(
"PrincipalComponentAnalysis2Ds")
602 _value_types.append(
"PrincipalComponentAnalysis2D")
605 PrincipalComponentAnalysis3Ds=list
606 _plural_types.append(
"PrincipalComponentAnalysis3Ds")
607 _value_types.append(
"PrincipalComponentAnalysis3D")
610 PrincipalComponentAnalysis4Ds=list
611 _plural_types.append(
"PrincipalComponentAnalysis4Ds")
612 _value_types.append(
"PrincipalComponentAnalysis4D")
615 PrincipalComponentAnalysis5Ds=list
616 _plural_types.append(
"PrincipalComponentAnalysis5Ds")
617 _value_types.append(
"PrincipalComponentAnalysis5D")
620 PrincipalComponentAnalysis6Ds=list
621 _plural_types.append(
"PrincipalComponentAnalysis6Ds")
622 _value_types.append(
"PrincipalComponentAnalysis6D")
625 PrincipalComponentAnalysis1Ds=list
626 _plural_types.append(
"PrincipalComponentAnalysis1Ds")
627 _value_types.append(
"PrincipalComponentAnalysisD<1>")
630 PrincipalComponentAnalysis2Ds=list
631 _plural_types.append(
"PrincipalComponentAnalysis2Ds")
632 _value_types.append(
"PrincipalComponentAnalysisD<2>")
635 PrincipalComponentAnalysis3Ds=list
636 _plural_types.append(
"PrincipalComponentAnalysis3Ds")
637 _value_types.append(
"PrincipalComponentAnalysisD<3>")
640 PrincipalComponentAnalysis4Ds=list
641 _plural_types.append(
"PrincipalComponentAnalysis4Ds")
642 _value_types.append(
"PrincipalComponentAnalysisD<4>")
645 PrincipalComponentAnalysis5Ds=list
646 _plural_types.append(
"PrincipalComponentAnalysis5Ds")
647 _value_types.append(
"PrincipalComponentAnalysisD<5>")
650 PrincipalComponentAnalysis6Ds=list
651 _plural_types.append(
"PrincipalComponentAnalysis6Ds")
652 _value_types.append(
"PrincipalComponentAnalysisD<6>")
655 PrincipalComponentAnalysisKDs=list
656 _plural_types.append(
"PrincipalComponentAnalysisKDs")
657 _value_types.append(
"PrincipalComponentAnalysisKD")
660 PrincipalComponentAnalysisKDs=list
661 _plural_types.append(
"PrincipalComponentAnalysisKDs")
662 _value_types.append(
"PrincipalComponentAnalysisD<-1>")
665 _object_types.append(
"NearestNeighbor1D")
668 def _object_cast_to_NearestNeighbor1D(o):
669 r"""_object_cast_to_NearestNeighbor1D(Object o) -> NearestNeighbor1D"""
670 return _IMP_algebra._object_cast_to_NearestNeighbor1D(o)
672 _object_types.append(
"NearestNeighbor2D")
675 def _object_cast_to_NearestNeighbor2D(o):
676 r"""_object_cast_to_NearestNeighbor2D(Object o) -> NearestNeighbor2D"""
677 return _IMP_algebra._object_cast_to_NearestNeighbor2D(o)
679 _object_types.append(
"NearestNeighbor3D")
682 def _object_cast_to_NearestNeighbor3D(o):
683 r"""_object_cast_to_NearestNeighbor3D(Object o) -> NearestNeighbor3D"""
684 return _IMP_algebra._object_cast_to_NearestNeighbor3D(o)
686 _object_types.append(
"NearestNeighbor4D")
689 def _object_cast_to_NearestNeighbor4D(o):
690 r"""_object_cast_to_NearestNeighbor4D(Object o) -> NearestNeighbor4D"""
691 return _IMP_algebra._object_cast_to_NearestNeighbor4D(o)
693 _object_types.append(
"NearestNeighbor5D")
696 def _object_cast_to_NearestNeighbor5D(o):
697 r"""_object_cast_to_NearestNeighbor5D(Object o) -> NearestNeighbor5D"""
698 return _IMP_algebra._object_cast_to_NearestNeighbor5D(o)
700 _object_types.append(
"NearestNeighbor6D")
703 def _object_cast_to_NearestNeighbor6D(o):
704 r"""_object_cast_to_NearestNeighbor6D(Object o) -> NearestNeighbor6D"""
705 return _IMP_algebra._object_cast_to_NearestNeighbor6D(o)
707 _object_types.append(
"NearestNeighborKD")
710 def _object_cast_to_NearestNeighborKD(o):
711 r"""_object_cast_to_NearestNeighborKD(Object o) -> NearestNeighborKD"""
712 return _IMP_algebra._object_cast_to_NearestNeighborKD(o)
714 ReferenceFrame3Ds=list
715 _plural_types.append(
"ReferenceFrame3Ds")
716 _value_types.append(
"ReferenceFrame3D")
720 _plural_types.append(
"Gaussian3Ds")
721 _value_types.append(
"Gaussian3D")
724 DefaultEmbedding1Ds=list
725 _plural_types.append(
"DefaultEmbedding1Ds")
726 _value_types.append(
"DefaultEmbedding1D")
729 DefaultEmbedding2Ds=list
730 _plural_types.append(
"DefaultEmbedding2Ds")
731 _value_types.append(
"DefaultEmbedding2D")
734 DefaultEmbedding3Ds=list
735 _plural_types.append(
"DefaultEmbedding3Ds")
736 _value_types.append(
"DefaultEmbedding3D")
739 DefaultEmbedding4Ds=list
740 _plural_types.append(
"DefaultEmbedding4Ds")
741 _value_types.append(
"DefaultEmbedding4D")
744 DefaultEmbedding5Ds=list
745 _plural_types.append(
"DefaultEmbedding5Ds")
746 _value_types.append(
"DefaultEmbedding5D")
749 DefaultEmbedding6Ds=list
750 _plural_types.append(
"DefaultEmbedding6Ds")
751 _value_types.append(
"DefaultEmbedding6D")
754 DefaultEmbedding1Ds=list
755 _plural_types.append(
"DefaultEmbedding1Ds")
756 _value_types.append(
"DefaultEmbeddingD<1>")
759 DefaultEmbedding2Ds=list
760 _plural_types.append(
"DefaultEmbedding2Ds")
761 _value_types.append(
"DefaultEmbeddingD<2>")
764 DefaultEmbedding3Ds=list
765 _plural_types.append(
"DefaultEmbedding3Ds")
766 _value_types.append(
"DefaultEmbeddingD<3>")
769 DefaultEmbedding4Ds=list
770 _plural_types.append(
"DefaultEmbedding4Ds")
771 _value_types.append(
"DefaultEmbeddingD<4>")
774 DefaultEmbedding5Ds=list
775 _plural_types.append(
"DefaultEmbedding5Ds")
776 _value_types.append(
"DefaultEmbeddingD<5>")
779 DefaultEmbedding6Ds=list
780 _plural_types.append(
"DefaultEmbedding6Ds")
781 _value_types.append(
"DefaultEmbeddingD<6>")
784 DefaultEmbeddingKDs=list
785 _plural_types.append(
"DefaultEmbeddingKDs")
786 _value_types.append(
"DefaultEmbeddingKD")
789 DefaultEmbeddingKDs=list
790 _plural_types.append(
"DefaultEmbeddingKDs")
791 _value_types.append(
"DefaultEmbeddingD<-1>")
795 _plural_types.append(
"LogEmbedding1Ds")
796 _value_types.append(
"LogEmbedding1D")
800 _plural_types.append(
"LogEmbedding2Ds")
801 _value_types.append(
"LogEmbedding2D")
805 _plural_types.append(
"LogEmbedding3Ds")
806 _value_types.append(
"LogEmbedding3D")
810 _plural_types.append(
"LogEmbedding4Ds")
811 _value_types.append(
"LogEmbedding4D")
815 _plural_types.append(
"LogEmbedding5Ds")
816 _value_types.append(
"LogEmbedding5D")
820 _plural_types.append(
"LogEmbedding6Ds")
821 _value_types.append(
"LogEmbedding6D")
825 _plural_types.append(
"LogEmbedding1Ds")
826 _value_types.append(
"LogEmbeddingD<1>")
830 _plural_types.append(
"LogEmbedding2Ds")
831 _value_types.append(
"LogEmbeddingD<2>")
835 _plural_types.append(
"LogEmbedding3Ds")
836 _value_types.append(
"LogEmbeddingD<3>")
840 _plural_types.append(
"LogEmbedding4Ds")
841 _value_types.append(
"LogEmbeddingD<4>")
845 _plural_types.append(
"LogEmbedding5Ds")
846 _value_types.append(
"LogEmbeddingD<5>")
850 _plural_types.append(
"LogEmbedding6Ds")
851 _value_types.append(
"LogEmbeddingD<6>")
855 _plural_types.append(
"LogEmbeddingKDs")
856 _value_types.append(
"LogEmbeddingKD")
860 _plural_types.append(
"LogEmbeddingKDs")
861 _value_types.append(
"LogEmbeddingD<-1>")
865 _plural_types.append(
"GridIndex1Ds")
866 _value_types.append(
"GridIndex1D")
870 _plural_types.append(
"GridIndex2Ds")
871 _value_types.append(
"GridIndex2D")
875 _plural_types.append(
"GridIndex3Ds")
876 _value_types.append(
"GridIndex3D")
880 _plural_types.append(
"GridIndex4Ds")
881 _value_types.append(
"GridIndex4D")
885 _plural_types.append(
"GridIndex5Ds")
886 _value_types.append(
"GridIndex5D")
890 _plural_types.append(
"GridIndex6Ds")
891 _value_types.append(
"GridIndex6D")
895 _plural_types.append(
"GridIndex1Ds")
896 _value_types.append(
"GridIndexD<1>")
900 _plural_types.append(
"GridIndex2Ds")
901 _value_types.append(
"GridIndexD<2>")
905 _plural_types.append(
"GridIndex3Ds")
906 _value_types.append(
"GridIndexD<3>")
910 _plural_types.append(
"GridIndex4Ds")
911 _value_types.append(
"GridIndexD<4>")
915 _plural_types.append(
"GridIndex5Ds")
916 _value_types.append(
"GridIndexD<5>")
920 _plural_types.append(
"GridIndex6Ds")
921 _value_types.append(
"GridIndexD<6>")
925 _plural_types.append(
"GridIndexKDs")
926 _value_types.append(
"GridIndexKD")
930 _plural_types.append(
"GridIndexKDs")
931 _value_types.append(
"GridIndexD<-1>")
934 ExtendedGridIndex1Ds=list
935 _plural_types.append(
"ExtendedGridIndex1Ds")
936 _value_types.append(
"ExtendedGridIndex1D")
939 ExtendedGridIndex2Ds=list
940 _plural_types.append(
"ExtendedGridIndex2Ds")
941 _value_types.append(
"ExtendedGridIndex2D")
944 ExtendedGridIndex3Ds=list
945 _plural_types.append(
"ExtendedGridIndex3Ds")
946 _value_types.append(
"ExtendedGridIndex3D")
949 ExtendedGridIndex4Ds=list
950 _plural_types.append(
"ExtendedGridIndex4Ds")
951 _value_types.append(
"ExtendedGridIndex4D")
954 ExtendedGridIndex5Ds=list
955 _plural_types.append(
"ExtendedGridIndex5Ds")
956 _value_types.append(
"ExtendedGridIndex5D")
959 ExtendedGridIndex6Ds=list
960 _plural_types.append(
"ExtendedGridIndex6Ds")
961 _value_types.append(
"ExtendedGridIndex6D")
964 ExtendedGridIndex1Ds=list
965 _plural_types.append(
"ExtendedGridIndex1Ds")
966 _value_types.append(
"ExtendedGridIndexD<1>")
969 ExtendedGridIndex2Ds=list
970 _plural_types.append(
"ExtendedGridIndex2Ds")
971 _value_types.append(
"ExtendedGridIndexD<2>")
974 ExtendedGridIndex3Ds=list
975 _plural_types.append(
"ExtendedGridIndex3Ds")
976 _value_types.append(
"ExtendedGridIndexD<3>")
979 ExtendedGridIndex4Ds=list
980 _plural_types.append(
"ExtendedGridIndex4Ds")
981 _value_types.append(
"ExtendedGridIndexD<4>")
984 ExtendedGridIndex5Ds=list
985 _plural_types.append(
"ExtendedGridIndex5Ds")
986 _value_types.append(
"ExtendedGridIndexD<5>")
989 ExtendedGridIndex6Ds=list
990 _plural_types.append(
"ExtendedGridIndex6Ds")
991 _value_types.append(
"ExtendedGridIndexD<6>")
994 ExtendedGridIndexKDs=list
995 _plural_types.append(
"ExtendedGridIndexKDs")
996 _value_types.append(
"ExtendedGridIndexKD")
999 ExtendedGridIndexKDs=list
1000 _plural_types.append(
"ExtendedGridIndexKDs")
1001 _value_types.append(
"ExtendedGridIndexD<-1>")
1004 BoundedGridRange1Ds=list
1005 _plural_types.append(
"BoundedGridRange1Ds")
1006 _value_types.append(
"BoundedGridRange1D")
1009 BoundedGridRange2Ds=list
1010 _plural_types.append(
"BoundedGridRange2Ds")
1011 _value_types.append(
"BoundedGridRange2D")
1014 BoundedGridRange3Ds=list
1015 _plural_types.append(
"BoundedGridRange3Ds")
1016 _value_types.append(
"BoundedGridRange3D")
1019 BoundedGridRange4Ds=list
1020 _plural_types.append(
"BoundedGridRange4Ds")
1021 _value_types.append(
"BoundedGridRange4D")
1024 BoundedGridRange5Ds=list
1025 _plural_types.append(
"BoundedGridRange5Ds")
1026 _value_types.append(
"BoundedGridRange5D")
1029 BoundedGridRange6Ds=list
1030 _plural_types.append(
"BoundedGridRange6Ds")
1031 _value_types.append(
"BoundedGridRange6D")
1034 BoundedGridRange1Ds=list
1035 _plural_types.append(
"BoundedGridRange1Ds")
1036 _value_types.append(
"BoundedGridRangeD<1>")
1039 BoundedGridRange2Ds=list
1040 _plural_types.append(
"BoundedGridRange2Ds")
1041 _value_types.append(
"BoundedGridRangeD<2>")
1044 BoundedGridRange3Ds=list
1045 _plural_types.append(
"BoundedGridRange3Ds")
1046 _value_types.append(
"BoundedGridRangeD<3>")
1049 BoundedGridRange4Ds=list
1050 _plural_types.append(
"BoundedGridRange4Ds")
1051 _value_types.append(
"BoundedGridRangeD<4>")
1054 BoundedGridRange5Ds=list
1055 _plural_types.append(
"BoundedGridRange5Ds")
1056 _value_types.append(
"BoundedGridRangeD<5>")
1059 BoundedGridRange6Ds=list
1060 _plural_types.append(
"BoundedGridRange6Ds")
1061 _value_types.append(
"BoundedGridRangeD<6>")
1064 BoundedGridRangeKDs=list
1065 _plural_types.append(
"BoundedGridRangeKDs")
1066 _value_types.append(
"BoundedGridRangeKD")
1069 BoundedGridRangeKDs=list
1070 _plural_types.append(
"BoundedGridRangeKDs")
1071 _value_types.append(
"BoundedGridRangeD<-1>")
1074 UnboundedGridRange1Ds=list
1075 _plural_types.append(
"UnboundedGridRange1Ds")
1076 _value_types.append(
"UnboundedGridRange1D")
1079 UnboundedGridRange2Ds=list
1080 _plural_types.append(
"UnboundedGridRange2Ds")
1081 _value_types.append(
"UnboundedGridRange2D")
1084 UnboundedGridRange3Ds=list
1085 _plural_types.append(
"UnboundedGridRange3Ds")
1086 _value_types.append(
"UnboundedGridRange3D")
1089 UnboundedGridRange4Ds=list
1090 _plural_types.append(
"UnboundedGridRange4Ds")
1091 _value_types.append(
"UnboundedGridRange4D")
1094 UnboundedGridRange5Ds=list
1095 _plural_types.append(
"UnboundedGridRange5Ds")
1096 _value_types.append(
"UnboundedGridRange5D")
1099 UnboundedGridRange6Ds=list
1100 _plural_types.append(
"UnboundedGridRange6Ds")
1101 _value_types.append(
"UnboundedGridRange6D")
1104 UnboundedGridRange1Ds=list
1105 _plural_types.append(
"UnboundedGridRange1Ds")
1106 _value_types.append(
"UnboundedGridRangeD<1>")
1109 UnboundedGridRange2Ds=list
1110 _plural_types.append(
"UnboundedGridRange2Ds")
1111 _value_types.append(
"UnboundedGridRangeD<2>")
1114 UnboundedGridRange3Ds=list
1115 _plural_types.append(
"UnboundedGridRange3Ds")
1116 _value_types.append(
"UnboundedGridRangeD<3>")
1119 UnboundedGridRange4Ds=list
1120 _plural_types.append(
"UnboundedGridRange4Ds")
1121 _value_types.append(
"UnboundedGridRangeD<4>")
1124 UnboundedGridRange5Ds=list
1125 _plural_types.append(
"UnboundedGridRange5Ds")
1126 _value_types.append(
"UnboundedGridRangeD<5>")
1129 UnboundedGridRange6Ds=list
1130 _plural_types.append(
"UnboundedGridRange6Ds")
1131 _value_types.append(
"UnboundedGridRangeD<6>")
1134 UnboundedGridRangeKDs=list
1135 _plural_types.append(
"UnboundedGridRangeKDs")
1136 _value_types.append(
"UnboundedGridRangeKD")
1139 UnboundedGridRangeKDs=list
1140 _plural_types.append(
"UnboundedGridRangeKDs")
1141 _value_types.append(
"UnboundedGridRangeD<-1>")
1145 _plural_types.append(
"LinearFit2Ds")
1146 _value_types.append(
"LinearFit2D")
1149 ParabolicFit2Ds=list
1150 _plural_types.append(
"ParabolicFit2Ds")
1151 _value_types.append(
"ParabolicFit2D")
1155 _plural_types.append(
"FixedXYZs")
1156 _value_types.append(
"FixedXYZ")
1158 class _GeometricPrimitive1D(object):
1159 r"""Proxy of C++ IMP::algebra::GeometricPrimitiveD< 1 > class."""
1161 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1163 def __init__(self, *args, **kwargs):
1164 raise AttributeError(
"No constructor defined")
1165 __repr__ = _swig_repr
1166 __swig_destroy__ = _IMP_algebra.delete__GeometricPrimitive1D
1169 _IMP_algebra._GeometricPrimitive1D_swigregister(_GeometricPrimitive1D)
1170 class _GeometricPrimitive2D(object):
1171 r"""Proxy of C++ IMP::algebra::GeometricPrimitiveD< 2 > class."""
1173 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1175 def __init__(self, *args, **kwargs):
1176 raise AttributeError(
"No constructor defined")
1177 __repr__ = _swig_repr
1178 __swig_destroy__ = _IMP_algebra.delete__GeometricPrimitive2D
1181 _IMP_algebra._GeometricPrimitive2D_swigregister(_GeometricPrimitive2D)
1182 class _GeometricPrimitive3D(object):
1183 r"""Proxy of C++ IMP::algebra::GeometricPrimitiveD< 3 > class."""
1185 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1187 def __init__(self, *args, **kwargs):
1188 raise AttributeError(
"No constructor defined")
1189 __repr__ = _swig_repr
1190 __swig_destroy__ = _IMP_algebra.delete__GeometricPrimitive3D
1193 _IMP_algebra._GeometricPrimitive3D_swigregister(_GeometricPrimitive3D)
1194 class _GeometricPrimitive4D(object):
1195 r"""Proxy of C++ IMP::algebra::GeometricPrimitiveD< 4 > class."""
1197 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1199 def __init__(self, *args, **kwargs):
1200 raise AttributeError(
"No constructor defined")
1201 __repr__ = _swig_repr
1202 __swig_destroy__ = _IMP_algebra.delete__GeometricPrimitive4D
1205 _IMP_algebra._GeometricPrimitive4D_swigregister(_GeometricPrimitive4D)
1206 class _GeometricPrimitive5D(object):
1207 r"""Proxy of C++ IMP::algebra::GeometricPrimitiveD< 5 > class."""
1209 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1211 def __init__(self, *args, **kwargs):
1212 raise AttributeError(
"No constructor defined")
1213 __repr__ = _swig_repr
1214 __swig_destroy__ = _IMP_algebra.delete__GeometricPrimitive5D
1217 _IMP_algebra._GeometricPrimitive5D_swigregister(_GeometricPrimitive5D)
1218 class _GeometricPrimitive6D(object):
1219 r"""Proxy of C++ IMP::algebra::GeometricPrimitiveD< 6 > class."""
1221 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1223 def __init__(self, *args, **kwargs):
1224 raise AttributeError(
"No constructor defined")
1225 __repr__ = _swig_repr
1226 __swig_destroy__ = _IMP_algebra.delete__GeometricPrimitive6D
1229 _IMP_algebra._GeometricPrimitive6D_swigregister(_GeometricPrimitive6D)
1230 class _GeometricPrimitiveKD(object):
1231 r"""Proxy of C++ IMP::algebra::GeometricPrimitiveD< -1 > class."""
1233 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1235 def __init__(self, *args, **kwargs):
1236 raise AttributeError(
"No constructor defined")
1237 __repr__ = _swig_repr
1238 __swig_destroy__ = _IMP_algebra.delete__GeometricPrimitiveKD
1241 _IMP_algebra._GeometricPrimitiveKD_swigregister(_GeometricPrimitiveKD)
1244 _plural_types.append(
"Vector1Ds")
1245 _value_types.append(
"Vector1D")
1249 _plural_types.append(
"Vector2Ds")
1250 _value_types.append(
"Vector2D")
1254 _plural_types.append(
"Vector3Ds")
1255 _value_types.append(
"Vector3D")
1259 _plural_types.append(
"Vector4Ds")
1260 _value_types.append(
"Vector4D")
1264 _plural_types.append(
"Vector5Ds")
1265 _value_types.append(
"Vector5D")
1269 _plural_types.append(
"Vector6Ds")
1270 _value_types.append(
"Vector6D")
1274 _plural_types.append(
"Vector1Ds")
1275 _value_types.append(
"VectorD<1>")
1279 _plural_types.append(
"Vector2Ds")
1280 _value_types.append(
"VectorD<2>")
1284 _plural_types.append(
"Vector3Ds")
1285 _value_types.append(
"VectorD<3>")
1289 _plural_types.append(
"Vector4Ds")
1290 _value_types.append(
"VectorD<4>")
1294 _plural_types.append(
"Vector5Ds")
1295 _value_types.append(
"VectorD<5>")
1299 _plural_types.append(
"Vector6Ds")
1300 _value_types.append(
"VectorD<6>")
1304 _plural_types.append(
"VectorKDs")
1305 _value_types.append(
"VectorKD")
1309 _plural_types.append(
"VectorKDs")
1310 _value_types.append(
"VectorD<-1>")
1312 class _VectorBaseKD(_GeometricPrimitiveKD):
1313 r"""Proxy of C++ IMP::algebra::VectorBaseD< -1 > class."""
1315 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1316 __repr__ = _swig_repr
1319 r"""__init__(_VectorBaseKD self) -> _VectorBaseKD"""
1320 _IMP_algebra._VectorBaseKD_swiginit(self, _IMP_algebra.new__VectorBaseKD())
1322 def get_scalar_product(self, o):
1323 r"""get_scalar_product(_VectorBaseKD self, _VectorBaseKD o) -> double"""
1324 return _IMP_algebra._VectorBaseKD_get_scalar_product(self, o)
1326 def get_squared_magnitude(self):
1327 r"""get_squared_magnitude(_VectorBaseKD self) -> double"""
1328 return _IMP_algebra._VectorBaseKD_get_squared_magnitude(self)
1330 def get_magnitude(self):
1331 r"""get_magnitude(_VectorBaseKD self) -> double"""
1332 return _IMP_algebra._VectorBaseKD_get_magnitude(self)
1335 r"""get_distance(_VectorBaseKD self, _VectorBaseKD o) -> double"""
1336 return _IMP_algebra._VectorBaseKD_get_distance(self, o)
1338 def __mul__(self, o):
1339 r"""__mul__(_VectorBaseKD self, _VectorBaseKD o) -> double"""
1340 return _IMP_algebra._VectorBaseKD___mul__(self, o)
1342 def __iadd__(self, o):
1343 r"""__iadd__(_VectorBaseKD self, _VectorBaseKD o) -> _VectorBaseKD"""
1344 return _IMP_algebra._VectorBaseKD___iadd__(self, o)
1346 def __isub__(self, o):
1347 r"""__isub__(_VectorBaseKD self, _VectorBaseKD o) -> _VectorBaseKD"""
1348 return _IMP_algebra._VectorBaseKD___isub__(self, o)
1350 def __itruediv__(self, *args):
1351 return _IMP_algebra._VectorBaseKD___itruediv__(self, *args)
1352 __idiv__ = __itruediv__
1356 def __imul__(self, f):
1357 r"""__imul__(_VectorBaseKD self, double f) -> _VectorBaseKD"""
1358 return _IMP_algebra._VectorBaseKD___imul__(self, f)
1360 def show(self, *args):
1362 show(_VectorBaseKD self, _ostream out, std::string delim, bool parens=True)
1363 show(_VectorBaseKD self, _ostream out=std::cout)
1365 return _IMP_algebra._VectorBaseKD_show(self, *args)
1367 def get_dimension(self):
1368 r"""get_dimension(_VectorBaseKD self) -> unsigned int"""
1369 return _IMP_algebra._VectorBaseKD_get_dimension(self)
1370 __swig_destroy__ = _IMP_algebra.delete__VectorBaseKD
1373 _IMP_algebra._VectorBaseKD_swigregister(_VectorBaseKD)
1374 class _VectorBase1D(_GeometricPrimitive1D):
1375 r"""Proxy of C++ IMP::algebra::VectorBaseD< 1 > class."""
1377 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1378 __repr__ = _swig_repr
1381 r"""__init__(_VectorBase1D self) -> _VectorBase1D"""
1382 _IMP_algebra._VectorBase1D_swiginit(self, _IMP_algebra.new__VectorBase1D())
1384 def get_scalar_product(self, o):
1385 r"""get_scalar_product(_VectorBase1D self, _VectorBase1D o) -> double"""
1386 return _IMP_algebra._VectorBase1D_get_scalar_product(self, o)
1388 def get_squared_magnitude(self):
1389 r"""get_squared_magnitude(_VectorBase1D self) -> double"""
1390 return _IMP_algebra._VectorBase1D_get_squared_magnitude(self)
1392 def get_magnitude(self):
1393 r"""get_magnitude(_VectorBase1D self) -> double"""
1394 return _IMP_algebra._VectorBase1D_get_magnitude(self)
1397 r"""get_distance(_VectorBase1D self, _VectorBase1D o) -> double"""
1398 return _IMP_algebra._VectorBase1D_get_distance(self, o)
1400 def __mul__(self, o):
1401 r"""__mul__(_VectorBase1D self, _VectorBase1D o) -> double"""
1402 return _IMP_algebra._VectorBase1D___mul__(self, o)
1404 def __iadd__(self, o):
1405 r"""__iadd__(_VectorBase1D self, _VectorBase1D o) -> _VectorBase1D"""
1406 return _IMP_algebra._VectorBase1D___iadd__(self, o)
1408 def __isub__(self, o):
1409 r"""__isub__(_VectorBase1D self, _VectorBase1D o) -> _VectorBase1D"""
1410 return _IMP_algebra._VectorBase1D___isub__(self, o)
1412 def __itruediv__(self, *args):
1413 return _IMP_algebra._VectorBase1D___itruediv__(self, *args)
1414 __idiv__ = __itruediv__
1418 def __imul__(self, f):
1419 r"""__imul__(_VectorBase1D self, double f) -> _VectorBase1D"""
1420 return _IMP_algebra._VectorBase1D___imul__(self, f)
1422 def show(self, *args):
1424 show(_VectorBase1D self, _ostream out, std::string delim, bool parens=True)
1425 show(_VectorBase1D self, _ostream out=std::cout)
1427 return _IMP_algebra._VectorBase1D_show(self, *args)
1429 def get_dimension(self):
1430 r"""get_dimension(_VectorBase1D self) -> unsigned int"""
1431 return _IMP_algebra._VectorBase1D_get_dimension(self)
1432 __swig_destroy__ = _IMP_algebra.delete__VectorBase1D
1435 _IMP_algebra._VectorBase1D_swigregister(_VectorBase1D)
1436 class _VectorBase2D(_GeometricPrimitive2D):
1437 r"""Proxy of C++ IMP::algebra::VectorBaseD< 2 > class."""
1439 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1440 __repr__ = _swig_repr
1443 r"""__init__(_VectorBase2D self) -> _VectorBase2D"""
1444 _IMP_algebra._VectorBase2D_swiginit(self, _IMP_algebra.new__VectorBase2D())
1446 def get_scalar_product(self, o):
1447 r"""get_scalar_product(_VectorBase2D self, _VectorBase2D o) -> double"""
1448 return _IMP_algebra._VectorBase2D_get_scalar_product(self, o)
1450 def get_squared_magnitude(self):
1451 r"""get_squared_magnitude(_VectorBase2D self) -> double"""
1452 return _IMP_algebra._VectorBase2D_get_squared_magnitude(self)
1454 def get_magnitude(self):
1455 r"""get_magnitude(_VectorBase2D self) -> double"""
1456 return _IMP_algebra._VectorBase2D_get_magnitude(self)
1459 r"""get_distance(_VectorBase2D self, _VectorBase2D o) -> double"""
1460 return _IMP_algebra._VectorBase2D_get_distance(self, o)
1462 def __mul__(self, o):
1463 r"""__mul__(_VectorBase2D self, _VectorBase2D o) -> double"""
1464 return _IMP_algebra._VectorBase2D___mul__(self, o)
1466 def __iadd__(self, o):
1467 r"""__iadd__(_VectorBase2D self, _VectorBase2D o) -> _VectorBase2D"""
1468 return _IMP_algebra._VectorBase2D___iadd__(self, o)
1470 def __isub__(self, o):
1471 r"""__isub__(_VectorBase2D self, _VectorBase2D o) -> _VectorBase2D"""
1472 return _IMP_algebra._VectorBase2D___isub__(self, o)
1474 def __itruediv__(self, *args):
1475 return _IMP_algebra._VectorBase2D___itruediv__(self, *args)
1476 __idiv__ = __itruediv__
1480 def __imul__(self, f):
1481 r"""__imul__(_VectorBase2D self, double f) -> _VectorBase2D"""
1482 return _IMP_algebra._VectorBase2D___imul__(self, f)
1484 def show(self, *args):
1486 show(_VectorBase2D self, _ostream out, std::string delim, bool parens=True)
1487 show(_VectorBase2D self, _ostream out=std::cout)
1489 return _IMP_algebra._VectorBase2D_show(self, *args)
1491 def get_dimension(self):
1492 r"""get_dimension(_VectorBase2D self) -> unsigned int"""
1493 return _IMP_algebra._VectorBase2D_get_dimension(self)
1494 __swig_destroy__ = _IMP_algebra.delete__VectorBase2D
1497 _IMP_algebra._VectorBase2D_swigregister(_VectorBase2D)
1498 class _VectorBase3D(_GeometricPrimitive3D):
1499 r"""Proxy of C++ IMP::algebra::VectorBaseD< 3 > class."""
1501 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1502 __repr__ = _swig_repr
1505 r"""__init__(_VectorBase3D self) -> _VectorBase3D"""
1506 _IMP_algebra._VectorBase3D_swiginit(self, _IMP_algebra.new__VectorBase3D())
1508 def get_scalar_product(self, o):
1509 r"""get_scalar_product(_VectorBase3D self, _VectorBase3D o) -> double"""
1510 return _IMP_algebra._VectorBase3D_get_scalar_product(self, o)
1512 def get_squared_magnitude(self):
1513 r"""get_squared_magnitude(_VectorBase3D self) -> double"""
1514 return _IMP_algebra._VectorBase3D_get_squared_magnitude(self)
1516 def get_magnitude(self):
1517 r"""get_magnitude(_VectorBase3D self) -> double"""
1518 return _IMP_algebra._VectorBase3D_get_magnitude(self)
1521 r"""get_distance(_VectorBase3D self, _VectorBase3D o) -> double"""
1522 return _IMP_algebra._VectorBase3D_get_distance(self, o)
1524 def __mul__(self, o):
1525 r"""__mul__(_VectorBase3D self, _VectorBase3D o) -> double"""
1526 return _IMP_algebra._VectorBase3D___mul__(self, o)
1528 def __iadd__(self, o):
1529 r"""__iadd__(_VectorBase3D self, _VectorBase3D o) -> _VectorBase3D"""
1530 return _IMP_algebra._VectorBase3D___iadd__(self, o)
1532 def __isub__(self, o):
1533 r"""__isub__(_VectorBase3D self, _VectorBase3D o) -> _VectorBase3D"""
1534 return _IMP_algebra._VectorBase3D___isub__(self, o)
1536 def __itruediv__(self, *args):
1537 return _IMP_algebra._VectorBase3D___itruediv__(self, *args)
1538 __idiv__ = __itruediv__
1542 def __imul__(self, f):
1543 r"""__imul__(_VectorBase3D self, double f) -> _VectorBase3D"""
1544 return _IMP_algebra._VectorBase3D___imul__(self, f)
1546 def show(self, *args):
1548 show(_VectorBase3D self, _ostream out, std::string delim, bool parens=True)
1549 show(_VectorBase3D self, _ostream out=std::cout)
1551 return _IMP_algebra._VectorBase3D_show(self, *args)
1553 def get_dimension(self):
1554 r"""get_dimension(_VectorBase3D self) -> unsigned int"""
1555 return _IMP_algebra._VectorBase3D_get_dimension(self)
1556 __swig_destroy__ = _IMP_algebra.delete__VectorBase3D
1559 _IMP_algebra._VectorBase3D_swigregister(_VectorBase3D)
1560 class _VectorBase4D(_GeometricPrimitive4D):
1561 r"""Proxy of C++ IMP::algebra::VectorBaseD< 4 > class."""
1563 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1564 __repr__ = _swig_repr
1567 r"""__init__(_VectorBase4D self) -> _VectorBase4D"""
1568 _IMP_algebra._VectorBase4D_swiginit(self, _IMP_algebra.new__VectorBase4D())
1570 def get_scalar_product(self, o):
1571 r"""get_scalar_product(_VectorBase4D self, _VectorBase4D o) -> double"""
1572 return _IMP_algebra._VectorBase4D_get_scalar_product(self, o)
1574 def get_squared_magnitude(self):
1575 r"""get_squared_magnitude(_VectorBase4D self) -> double"""
1576 return _IMP_algebra._VectorBase4D_get_squared_magnitude(self)
1578 def get_magnitude(self):
1579 r"""get_magnitude(_VectorBase4D self) -> double"""
1580 return _IMP_algebra._VectorBase4D_get_magnitude(self)
1583 r"""get_distance(_VectorBase4D self, _VectorBase4D o) -> double"""
1584 return _IMP_algebra._VectorBase4D_get_distance(self, o)
1586 def __mul__(self, o):
1587 r"""__mul__(_VectorBase4D self, _VectorBase4D o) -> double"""
1588 return _IMP_algebra._VectorBase4D___mul__(self, o)
1590 def __iadd__(self, o):
1591 r"""__iadd__(_VectorBase4D self, _VectorBase4D o) -> _VectorBase4D"""
1592 return _IMP_algebra._VectorBase4D___iadd__(self, o)
1594 def __isub__(self, o):
1595 r"""__isub__(_VectorBase4D self, _VectorBase4D o) -> _VectorBase4D"""
1596 return _IMP_algebra._VectorBase4D___isub__(self, o)
1598 def __itruediv__(self, *args):
1599 return _IMP_algebra._VectorBase4D___itruediv__(self, *args)
1600 __idiv__ = __itruediv__
1604 def __imul__(self, f):
1605 r"""__imul__(_VectorBase4D self, double f) -> _VectorBase4D"""
1606 return _IMP_algebra._VectorBase4D___imul__(self, f)
1608 def show(self, *args):
1610 show(_VectorBase4D self, _ostream out, std::string delim, bool parens=True)
1611 show(_VectorBase4D self, _ostream out=std::cout)
1613 return _IMP_algebra._VectorBase4D_show(self, *args)
1615 def get_dimension(self):
1616 r"""get_dimension(_VectorBase4D self) -> unsigned int"""
1617 return _IMP_algebra._VectorBase4D_get_dimension(self)
1618 __swig_destroy__ = _IMP_algebra.delete__VectorBase4D
1621 _IMP_algebra._VectorBase4D_swigregister(_VectorBase4D)
1622 class _VectorBase5D(_GeometricPrimitive5D):
1623 r"""Proxy of C++ IMP::algebra::VectorBaseD< 5 > class."""
1625 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1626 __repr__ = _swig_repr
1629 r"""__init__(_VectorBase5D self) -> _VectorBase5D"""
1630 _IMP_algebra._VectorBase5D_swiginit(self, _IMP_algebra.new__VectorBase5D())
1632 def get_scalar_product(self, o):
1633 r"""get_scalar_product(_VectorBase5D self, _VectorBase5D o) -> double"""
1634 return _IMP_algebra._VectorBase5D_get_scalar_product(self, o)
1636 def get_squared_magnitude(self):
1637 r"""get_squared_magnitude(_VectorBase5D self) -> double"""
1638 return _IMP_algebra._VectorBase5D_get_squared_magnitude(self)
1640 def get_magnitude(self):
1641 r"""get_magnitude(_VectorBase5D self) -> double"""
1642 return _IMP_algebra._VectorBase5D_get_magnitude(self)
1645 r"""get_distance(_VectorBase5D self, _VectorBase5D o) -> double"""
1646 return _IMP_algebra._VectorBase5D_get_distance(self, o)
1648 def __mul__(self, o):
1649 r"""__mul__(_VectorBase5D self, _VectorBase5D o) -> double"""
1650 return _IMP_algebra._VectorBase5D___mul__(self, o)
1652 def __iadd__(self, o):
1653 r"""__iadd__(_VectorBase5D self, _VectorBase5D o) -> _VectorBase5D"""
1654 return _IMP_algebra._VectorBase5D___iadd__(self, o)
1656 def __isub__(self, o):
1657 r"""__isub__(_VectorBase5D self, _VectorBase5D o) -> _VectorBase5D"""
1658 return _IMP_algebra._VectorBase5D___isub__(self, o)
1660 def __itruediv__(self, *args):
1661 return _IMP_algebra._VectorBase5D___itruediv__(self, *args)
1662 __idiv__ = __itruediv__
1666 def __imul__(self, f):
1667 r"""__imul__(_VectorBase5D self, double f) -> _VectorBase5D"""
1668 return _IMP_algebra._VectorBase5D___imul__(self, f)
1670 def show(self, *args):
1672 show(_VectorBase5D self, _ostream out, std::string delim, bool parens=True)
1673 show(_VectorBase5D self, _ostream out=std::cout)
1675 return _IMP_algebra._VectorBase5D_show(self, *args)
1677 def get_dimension(self):
1678 r"""get_dimension(_VectorBase5D self) -> unsigned int"""
1679 return _IMP_algebra._VectorBase5D_get_dimension(self)
1680 __swig_destroy__ = _IMP_algebra.delete__VectorBase5D
1683 _IMP_algebra._VectorBase5D_swigregister(_VectorBase5D)
1684 class _VectorBase6D(_GeometricPrimitive6D):
1685 r"""Proxy of C++ IMP::algebra::VectorBaseD< 6 > class."""
1687 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1688 __repr__ = _swig_repr
1691 r"""__init__(_VectorBase6D self) -> _VectorBase6D"""
1692 _IMP_algebra._VectorBase6D_swiginit(self, _IMP_algebra.new__VectorBase6D())
1694 def get_scalar_product(self, o):
1695 r"""get_scalar_product(_VectorBase6D self, _VectorBase6D o) -> double"""
1696 return _IMP_algebra._VectorBase6D_get_scalar_product(self, o)
1698 def get_squared_magnitude(self):
1699 r"""get_squared_magnitude(_VectorBase6D self) -> double"""
1700 return _IMP_algebra._VectorBase6D_get_squared_magnitude(self)
1702 def get_magnitude(self):
1703 r"""get_magnitude(_VectorBase6D self) -> double"""
1704 return _IMP_algebra._VectorBase6D_get_magnitude(self)
1707 r"""get_distance(_VectorBase6D self, _VectorBase6D o) -> double"""
1708 return _IMP_algebra._VectorBase6D_get_distance(self, o)
1710 def __mul__(self, o):
1711 r"""__mul__(_VectorBase6D self, _VectorBase6D o) -> double"""
1712 return _IMP_algebra._VectorBase6D___mul__(self, o)
1714 def __iadd__(self, o):
1715 r"""__iadd__(_VectorBase6D self, _VectorBase6D o) -> _VectorBase6D"""
1716 return _IMP_algebra._VectorBase6D___iadd__(self, o)
1718 def __isub__(self, o):
1719 r"""__isub__(_VectorBase6D self, _VectorBase6D o) -> _VectorBase6D"""
1720 return _IMP_algebra._VectorBase6D___isub__(self, o)
1722 def __itruediv__(self, *args):
1723 return _IMP_algebra._VectorBase6D___itruediv__(self, *args)
1724 __idiv__ = __itruediv__
1728 def __imul__(self, f):
1729 r"""__imul__(_VectorBase6D self, double f) -> _VectorBase6D"""
1730 return _IMP_algebra._VectorBase6D___imul__(self, f)
1732 def show(self, *args):
1734 show(_VectorBase6D self, _ostream out, std::string delim, bool parens=True)
1735 show(_VectorBase6D self, _ostream out=std::cout)
1737 return _IMP_algebra._VectorBase6D_show(self, *args)
1739 def get_dimension(self):
1740 r"""get_dimension(_VectorBase6D self) -> unsigned int"""
1741 return _IMP_algebra._VectorBase6D_get_dimension(self)
1742 __swig_destroy__ = _IMP_algebra.delete__VectorBase6D
1745 _IMP_algebra._VectorBase6D_swigregister(_VectorBase6D)
1748 r"""get_basis_vector_kd(int D, unsigned int coordinate) -> VectorKD"""
1749 return _IMP_algebra.get_basis_vector_kd(D, coordinate)
1752 r"""get_zero_vector_kd(int D) -> VectorKD"""
1753 return _IMP_algebra.get_zero_vector_kd(D)
1756 r"""get_ones_vector_kd(unsigned int D, double v=1) -> VectorKD"""
1757 return _IMP_algebra.get_ones_vector_kd(D, v)
1760 r"""get_vector_product(Vector3D p1, Vector3D p2) -> Vector3D"""
1761 return _IMP_algebra.get_vector_product(p1, p2)
1764 r"""get_orthogonal_vector(Vector3D v) -> Vector3D"""
1765 return _IMP_algebra.get_orthogonal_vector(v)
1768 r"""get_centroid(IMP::algebra::Vector3Ds const & ps) -> Vector3D"""
1769 return _IMP_algebra.get_centroid(ps)
1772 r"""get_radius_of_gyration(IMP::algebra::Vector3Ds const & ps) -> double"""
1773 return _IMP_algebra.get_radius_of_gyration(ps)
1774 class Rotation3D(_GeometricPrimitive3D):
1775 r"""Proxy of C++ IMP::algebra::Rotation3D class."""
1777 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1779 def __init__(self, *args):
1781 __init__(Rotation3D self, Rotation3D rot) -> Rotation3D
1782 __init__(Rotation3D self, Vector4D v, bool assume_normalized=False) -> Rotation3D
1783 __init__(Rotation3D self) -> Rotation3D
1784 __init__(Rotation3D self, double a, double b, double c, double d) -> Rotation3D
1786 _IMP_algebra.Rotation3D_swiginit(self, _IMP_algebra.new_Rotation3D(*args))
1787 __swig_destroy__ = _IMP_algebra.delete_Rotation3D
1789 def get_rotated_no_cache(self, o):
1790 r"""get_rotated_no_cache(Rotation3D self, Vector3D o) -> Vector3D"""
1791 return _IMP_algebra.Rotation3D_get_rotated_no_cache(self, o)
1793 def get_rotated_one_coordinate_no_cache(self, o, coord):
1794 r"""get_rotated_one_coordinate_no_cache(Rotation3D self, Vector3D o, unsigned int coord) -> double"""
1795 return _IMP_algebra.Rotation3D_get_rotated_one_coordinate_no_cache(self, o, coord)
1797 def get_rotated(self, o):
1798 r"""get_rotated(Rotation3D self, Vector3D o) -> Vector3D"""
1799 return _IMP_algebra.Rotation3D_get_rotated(self, o)
1801 def get_rotated_adjoint(self, v, Dw):
1802 r"""get_rotated_adjoint(Rotation3D self, Vector3D v, Vector3D Dw) -> _RotatedVector3DAdjoint"""
1803 return _IMP_algebra.Rotation3D_get_rotated_adjoint(self, v, Dw)
1805 def get_rotated_one_coordinate(self, o, coord):
1806 r"""get_rotated_one_coordinate(Rotation3D self, Vector3D o, unsigned int coord) -> double"""
1807 return _IMP_algebra.Rotation3D_get_rotated_one_coordinate(self, o, coord)
1809 def get_rotation_matrix_row(self, i):
1810 r"""get_rotation_matrix_row(Rotation3D self, int i) -> Vector3D"""
1811 return _IMP_algebra.Rotation3D_get_rotation_matrix_row(self, i)
1813 def show(self, *args):
1814 r"""show(Rotation3D self, _ostream out=std::cout)"""
1815 return _IMP_algebra.Rotation3D_show(self, *args)
1817 def get_inverse(self):
1818 r"""get_inverse(Rotation3D self) -> Rotation3D"""
1819 return _IMP_algebra.Rotation3D_get_inverse(self)
1821 def get_quaternion(self):
1822 r"""get_quaternion(Rotation3D self) -> Vector4D"""
1823 return _IMP_algebra.Rotation3D_get_quaternion(self)
1825 def __mul__(self, *args):
1827 __mul__(Rotation3D self, Vector3D v) -> Vector3D
1828 __mul__(Rotation3D self, Rotation3D q) -> Rotation3D
1830 return _IMP_algebra.Rotation3D___mul__(self, *args)
1832 def __truediv__(self, *args):
1833 return _IMP_algebra.Rotation3D___truediv__(self, *args)
1834 __div__ = __truediv__
1838 def get_gradient_of_rotated(self, v, i, wrt_unnorm=False):
1839 r"""get_gradient_of_rotated(Rotation3D self, Vector3D v, unsigned int i, bool wrt_unnorm=False) -> Vector3D"""
1840 return _IMP_algebra.Rotation3D_get_gradient_of_rotated(self, v, i, wrt_unnorm)
1842 def get_jacobian_of_rotated(self, v, wrt_unnorm=False):
1843 r"""get_jacobian_of_rotated(Rotation3D self, Eigen::Vector3d const & v, bool wrt_unnorm=False) -> Eigen::MatrixXd"""
1844 return _IMP_algebra.Rotation3D_get_jacobian_of_rotated(self, v, wrt_unnorm)
1846 def get_is_valid(self):
1847 r"""get_is_valid(Rotation3D self) -> bool"""
1848 return _IMP_algebra.Rotation3D_get_is_valid(self)
1851 r"""__str__(Rotation3D self) -> std::string"""
1852 return _IMP_algebra.Rotation3D___str__(self)
1855 r"""__repr__(Rotation3D self) -> std::string"""
1856 return _IMP_algebra.Rotation3D___repr__(self)
1858 def _get_as_binary(self):
1859 r"""_get_as_binary(Rotation3D self) -> PyObject *"""
1860 return _IMP_algebra.Rotation3D__get_as_binary(self)
1862 def _set_from_binary(self, p):
1863 r"""_set_from_binary(Rotation3D self, PyObject * p)"""
1864 return _IMP_algebra.Rotation3D__set_from_binary(self, p)
1866 def __getstate__(self):
1867 p = self._get_as_binary()
1868 if len(self.__dict__) > 1:
1869 d = self.__dict__.copy()
1874 def __setstate__(self, p):
1875 if not hasattr(self,
'this'):
1877 if isinstance(p, tuple):
1879 self.__dict__.update(d)
1880 return self._set_from_binary(p)
1883 __truediv__ = __div__
1887 _IMP_algebra.Rotation3D_swigregister(Rotation3D)
1890 r"""get_jacobian_of_composed_wrt_first(Rotation3D q, Rotation3D p, bool wrt_unnorm=False) -> Eigen::MatrixXd"""
1891 return _IMP_algebra.get_jacobian_of_composed_wrt_first(q, p, wrt_unnorm)
1894 r"""get_jacobian_of_composed_wrt_second(Rotation3D q, Rotation3D p, bool wrt_unnorm=False) -> Eigen::MatrixXd"""
1895 return _IMP_algebra.get_jacobian_of_composed_wrt_second(q, p, wrt_unnorm)
1898 r"""get_identity_rotation_3d() -> Rotation3D"""
1899 return _IMP_algebra.get_identity_rotation_3d()
1902 r"""get_rotation_about_normalized_axis(Vector3D axis_norm, double angle) -> Rotation3D"""
1903 return _IMP_algebra.get_rotation_about_normalized_axis(axis_norm, angle)
1906 r"""get_rotation_about_axis(Vector3D axis, double angle) -> Rotation3D"""
1907 return _IMP_algebra.get_rotation_about_axis(axis, angle)
1910 r"""get_rotation_taking_first_to_second(Vector3D v1, Vector3D v2) -> Rotation3D"""
1911 return _IMP_algebra.get_rotation_taking_first_to_second(v1, v2)
1915 get_rotation_from_matrix(double m00, double m01, double m02, double m10, double m11, double m12, double m20, double m21, double m22) -> Rotation3D
1916 get_rotation_from_matrix(Eigen::Matrix3d m) -> Rotation3D
1918 return _IMP_algebra.get_rotation_from_matrix(*args)
1922 get_random_rotation_3d() -> Rotation3D
1923 get_random_rotation_3d(Rotation3D center, double distance) -> Rotation3D
1925 return _IMP_algebra.get_random_rotation_3d(*args)
1928 r"""get_uniform_cover_rotations_3d(unsigned int num_points) -> IMP::algebra::Rotation3Ds"""
1929 return _IMP_algebra.get_uniform_cover_rotations_3d(num_points)
1932 r"""get_uniformly_sampled_rotations(double delta) -> IMP::algebra::Rotation3Ds"""
1933 return _IMP_algebra.get_uniformly_sampled_rotations(delta)
1936 r"""get_rotation_from_vector4d(Vector4D v) -> Rotation3D"""
1937 return _IMP_algebra.get_rotation_from_vector4d(v)
1940 r"""get_rotation_from_fixed_xyz(double xr, double yr, double zr) -> Rotation3D"""
1941 return _IMP_algebra.get_rotation_from_fixed_xyz(xr, yr, zr)
1944 r"""get_rotation_from_fixed_zxz(double phi, double theta, double psi) -> Rotation3D"""
1945 return _IMP_algebra.get_rotation_from_fixed_zxz(phi, theta, psi)
1948 r"""get_rotation_from_fixed_zyz(double Rot, double Tilt, double Psi) -> Rotation3D"""
1949 return _IMP_algebra.get_rotation_from_fixed_zyz(Rot, Tilt, Psi)
1950 class FixedXYZ(_GeometricPrimitive3D):
1951 r"""Proxy of C++ IMP::algebra::FixedXYZ class."""
1953 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1955 def __init__(self, *args):
1957 __init__(FixedXYZ self) -> FixedXYZ
1958 __init__(FixedXYZ self, double x, double y, double z) -> FixedXYZ
1960 _IMP_algebra.FixedXYZ_swiginit(self, _IMP_algebra.new_FixedXYZ(*args))
1963 r"""get_x(FixedXYZ self) -> double"""
1964 return _IMP_algebra.FixedXYZ_get_x(self)
1967 r"""get_y(FixedXYZ self) -> double"""
1968 return _IMP_algebra.FixedXYZ_get_y(self)
1971 r"""get_z(FixedXYZ self) -> double"""
1972 return _IMP_algebra.FixedXYZ_get_z(self)
1974 def show(self, *args):
1975 r"""show(FixedXYZ self, _ostream out=std::cout)"""
1976 return _IMP_algebra.FixedXYZ_show(self, *args)
1979 r"""__str__(FixedXYZ self) -> std::string"""
1980 return _IMP_algebra.FixedXYZ___str__(self)
1983 r"""__repr__(FixedXYZ self) -> std::string"""
1984 return _IMP_algebra.FixedXYZ___repr__(self)
1986 def _get_as_binary(self):
1987 r"""_get_as_binary(FixedXYZ self) -> PyObject *"""
1988 return _IMP_algebra.FixedXYZ__get_as_binary(self)
1990 def _set_from_binary(self, p):
1991 r"""_set_from_binary(FixedXYZ self, PyObject * p)"""
1992 return _IMP_algebra.FixedXYZ__set_from_binary(self, p)
1994 def __getstate__(self):
1995 p = self._get_as_binary()
1996 if len(self.__dict__) > 1:
1997 d = self.__dict__.copy()
2002 def __setstate__(self, p):
2003 if not hasattr(self,
'this'):
2005 if isinstance(p, tuple):
2007 self.__dict__.update(d)
2008 return self._set_from_binary(p)
2010 __swig_destroy__ = _IMP_algebra.delete_FixedXYZ
2013 _IMP_algebra.FixedXYZ_swigregister(FixedXYZ)
2016 r"""get_fixed_xyz_from_rotation(Rotation3D r) -> FixedXYZ"""
2017 return _IMP_algebra.get_fixed_xyz_from_rotation(r)
2020 r"""get_interpolated(Rotation3D a, Rotation3D b, double f) -> Rotation3D"""
2021 return _IMP_algebra.get_interpolated(a, b, f)
2024 r"""get_rotation_from_x_y_axes(Vector3D x, Vector3D y) -> Rotation3D"""
2025 return _IMP_algebra.get_rotation_from_x_y_axes(x, y)
2028 r"""get_axis_and_angle(Rotation3D rot) -> _AxisAnglePair"""
2029 return _IMP_algebra.get_axis_and_angle(rot)
2032 r"""get_unit_bounding_box_kd(unsigned int d) -> BoundingBoxKD"""
2033 return _IMP_algebra.get_unit_bounding_box_kd(d)
2036 r"""get_cube_kd(unsigned int d, double radius) -> BoundingBoxKD"""
2037 return _IMP_algebra.get_cube_kd(d, radius)
2040 r"""get_edges(BoundingBox3D arg1) -> IMP::IntPairs"""
2041 return _IMP_algebra.get_edges(arg1)
2042 class Transformation3D(_GeometricPrimitive3D):
2043 r"""Proxy of C++ IMP::algebra::Transformation3D class."""
2045 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2047 def __init__(self, *args):
2049 __init__(Transformation3D self, Transformation3D arg2) -> Transformation3D
2050 __init__(Transformation3D self) -> Transformation3D
2051 __init__(Transformation3D self, Rotation3D r, Vector3D t=IMP::algebra::Vector3D(0, 0, 0)) -> Transformation3D
2052 __init__(Transformation3D self, Vector3D t) -> Transformation3D
2054 _IMP_algebra.Transformation3D_swiginit(self, _IMP_algebra.new_Transformation3D(*args))
2055 __swig_destroy__ = _IMP_algebra.delete_Transformation3D
2057 def get_transformed(self, o):
2058 r"""get_transformed(Transformation3D self, Vector3D o) -> Vector3D"""
2059 return _IMP_algebra.Transformation3D_get_transformed(self, o)
2061 def get_transformed_adjoint(self, v, Dw):
2062 r"""get_transformed_adjoint(Transformation3D self, Vector3D v, Vector3D Dw) -> _TransformedVector3DAdjoint"""
2063 return _IMP_algebra.Transformation3D_get_transformed_adjoint(self, v, Dw)
2065 def __mul__(self, *args):
2067 __mul__(Transformation3D self, Vector3D v) -> Vector3D
2068 __mul__(Transformation3D self, Transformation3D tr) -> Transformation3D
2070 return _IMP_algebra.Transformation3D___mul__(self, *args)
2072 def __truediv__(self, *args):
2073 return _IMP_algebra.Transformation3D___truediv__(self, *args)
2074 __div__ = __truediv__
2078 def get_rotation(self):
2079 r"""get_rotation(Transformation3D self) -> Rotation3D"""
2080 return _IMP_algebra.Transformation3D_get_rotation(self)
2082 def get_translation(self):
2083 r"""get_translation(Transformation3D self) -> Vector3D"""
2084 return _IMP_algebra.Transformation3D_get_translation(self)
2086 def show(self, *args):
2087 r"""show(Transformation3D self, _ostream out=std::cout)"""
2088 return _IMP_algebra.Transformation3D_show(self, *args)
2090 def get_inverse(self):
2091 r"""get_inverse(Transformation3D self) -> Transformation3D"""
2092 return _IMP_algebra.Transformation3D_get_inverse(self)
2094 def get_is_valid(self):
2095 r"""get_is_valid(Transformation3D self) -> bool"""
2096 return _IMP_algebra.Transformation3D_get_is_valid(self)
2099 r"""__str__(Transformation3D self) -> std::string"""
2100 return _IMP_algebra.Transformation3D___str__(self)
2103 r"""__repr__(Transformation3D self) -> std::string"""
2104 return _IMP_algebra.Transformation3D___repr__(self)
2106 def _get_as_binary(self):
2107 r"""_get_as_binary(Transformation3D self) -> PyObject *"""
2108 return _IMP_algebra.Transformation3D__get_as_binary(self)
2110 def _set_from_binary(self, p):
2111 r"""_set_from_binary(Transformation3D self, PyObject * p)"""
2112 return _IMP_algebra.Transformation3D__set_from_binary(self, p)
2114 def __getstate__(self):
2115 p = self._get_as_binary()
2116 if len(self.__dict__) > 1:
2117 d = self.__dict__.copy()
2122 def __setstate__(self, p):
2123 if not hasattr(self,
'this'):
2125 if isinstance(p, tuple):
2127 self.__dict__.update(d)
2128 return self._set_from_binary(p)
2131 __truediv__ = __div__
2135 _IMP_algebra.Transformation3D_swigregister(Transformation3D)
2138 r"""get_identity_transformation_3d() -> Transformation3D"""
2139 return _IMP_algebra.get_identity_transformation_3d()
2143 compose_adjoint(Rotation3D A, Rotation3D B, Vector4D DC) -> _ComposeRotation3DAdjoint
2144 compose_adjoint(Transformation3D TA, Transformation3D TB, _Transformation3DAdjoint DTC) -> _ComposeTransformation3DAdjoint
2146 return _IMP_algebra.compose_adjoint(*args)
2149 r"""get_transformation_3d(Transformation2D t2d) -> Transformation3D"""
2150 return _IMP_algebra.get_transformation_3d(t2d)
2153 r"""get_random_local_transformation(Vector3D origin, double max_translation=5., double max_angle_in_rad=0.26) -> Transformation3D"""
2154 return _IMP_algebra.get_random_local_transformation(origin, max_translation, max_angle_in_rad)
2155 class Rotation2D(_GeometricPrimitive2D):
2156 r"""Proxy of C++ IMP::algebra::Rotation2D class."""
2158 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2160 def __init__(self, *args):
2162 __init__(Rotation2D self) -> Rotation2D
2163 __init__(Rotation2D self, double angle) -> Rotation2D
2165 _IMP_algebra.Rotation2D_swiginit(self, _IMP_algebra.new_Rotation2D(*args))
2167 def get_rotated(self, *args):
2169 get_rotated(Rotation2D self, Vector2D o) -> Vector2D
2170 get_rotated(Rotation2D self, double const x, double const y) -> Vector2D
2172 return _IMP_algebra.Rotation2D_get_rotated(self, *args)
2174 def get_inverse(self):
2175 r"""get_inverse(Rotation2D self) -> Rotation2D"""
2176 return _IMP_algebra.Rotation2D_get_inverse(self)
2178 def set_angle(self, angle):
2179 r"""set_angle(Rotation2D self, double angle)"""
2180 return _IMP_algebra.Rotation2D_set_angle(self, angle)
2183 r"""get_angle(Rotation2D self) -> double"""
2184 return _IMP_algebra.Rotation2D_get_angle(self)
2186 def show(self, *args):
2187 r"""show(Rotation2D self, _ostream out=std::cout)"""
2188 return _IMP_algebra.Rotation2D_show(self, *args)
2191 r"""__str__(Rotation2D self) -> std::string"""
2192 return _IMP_algebra.Rotation2D___str__(self)
2195 r"""__repr__(Rotation2D self) -> std::string"""
2196 return _IMP_algebra.Rotation2D___repr__(self)
2198 def _get_as_binary(self):
2199 r"""_get_as_binary(Rotation2D self) -> PyObject *"""
2200 return _IMP_algebra.Rotation2D__get_as_binary(self)
2202 def _set_from_binary(self, p):
2203 r"""_set_from_binary(Rotation2D self, PyObject * p)"""
2204 return _IMP_algebra.Rotation2D__set_from_binary(self, p)
2206 def __getstate__(self):
2207 p = self._get_as_binary()
2208 if len(self.__dict__) > 1:
2209 d = self.__dict__.copy()
2214 def __setstate__(self, p):
2215 if not hasattr(self,
'this'):
2217 if isinstance(p, tuple):
2219 self.__dict__.update(d)
2220 return self._set_from_binary(p)
2222 __swig_destroy__ = _IMP_algebra.delete_Rotation2D
2225 _IMP_algebra.Rotation2D_swigregister(Rotation2D)
2228 r"""get_identity_rotation_2d() -> Rotation2D"""
2229 return _IMP_algebra.get_identity_rotation_2d()
2232 r"""get_random_rotation_2d() -> Rotation2D"""
2233 return _IMP_algebra.get_random_rotation_2d()
2236 r"""get_rotation_to_x_axis(Vector2D v) -> Rotation2D"""
2237 return _IMP_algebra.get_rotation_to_x_axis(v)
2238 class Transformation2D(_GeometricPrimitive2D):
2239 r"""Proxy of C++ IMP::algebra::Transformation2D class."""
2241 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2243 def __init__(self, *args):
2245 __init__(Transformation2D self, Transformation2D arg2) -> Transformation2D
2246 __init__(Transformation2D self) -> Transformation2D
2247 __init__(Transformation2D self, Rotation2D r, Vector2D t=IMP::algebra::Vector2D(0.0, 0.0)) -> Transformation2D
2248 __init__(Transformation2D self, Vector2D t) -> Transformation2D
2250 _IMP_algebra.Transformation2D_swiginit(self, _IMP_algebra.new_Transformation2D(*args))
2251 __swig_destroy__ = _IMP_algebra.delete_Transformation2D
2253 def get_transformed(self, o):
2254 r"""get_transformed(Transformation2D self, Vector2D o) -> Vector2D"""
2255 return _IMP_algebra.Transformation2D_get_transformed(self, o)
2257 def __mul__(self, *args):
2259 __mul__(Transformation2D self, Vector2D v) -> Vector2D
2260 __mul__(Transformation2D self, Transformation2D tr) -> Transformation2D
2262 return _IMP_algebra.Transformation2D___mul__(self, *args)
2264 def __truediv__(self, *args):
2265 return _IMP_algebra.Transformation2D___truediv__(self, *args)
2266 __div__ = __truediv__
2270 def get_rotation(self):
2271 r"""get_rotation(Transformation2D self) -> Rotation2D"""
2272 return _IMP_algebra.Transformation2D_get_rotation(self)
2274 def set_rotation(self, angle):
2275 r"""set_rotation(Transformation2D self, double angle)"""
2276 return _IMP_algebra.Transformation2D_set_rotation(self, angle)
2278 def get_translation(self):
2279 r"""get_translation(Transformation2D self) -> Vector2D"""
2280 return _IMP_algebra.Transformation2D_get_translation(self)
2282 def set_translation(self, v):
2283 r"""set_translation(Transformation2D self, Vector2D v)"""
2284 return _IMP_algebra.Transformation2D_set_translation(self, v)
2286 def show(self, *args):
2287 r"""show(Transformation2D self, _ostream out=std::cout)"""
2288 return _IMP_algebra.Transformation2D_show(self, *args)
2290 def get_inverse(self):
2291 r"""get_inverse(Transformation2D self) -> Transformation2D"""
2292 return _IMP_algebra.Transformation2D_get_inverse(self)
2295 r"""__str__(Transformation2D self) -> std::string"""
2296 return _IMP_algebra.Transformation2D___str__(self)
2299 r"""__repr__(Transformation2D self) -> std::string"""
2300 return _IMP_algebra.Transformation2D___repr__(self)
2302 def _get_as_binary(self):
2303 r"""_get_as_binary(Transformation2D self) -> PyObject *"""
2304 return _IMP_algebra.Transformation2D__get_as_binary(self)
2306 def _set_from_binary(self, p):
2307 r"""_set_from_binary(Transformation2D self, PyObject * p)"""
2308 return _IMP_algebra.Transformation2D__set_from_binary(self, p)
2310 def __getstate__(self):
2311 p = self._get_as_binary()
2312 if len(self.__dict__) > 1:
2313 d = self.__dict__.copy()
2318 def __setstate__(self, p):
2319 if not hasattr(self,
'this'):
2321 if isinstance(p, tuple):
2323 self.__dict__.update(d)
2324 return self._set_from_binary(p)
2327 __truediv__ = __div__
2331 _IMP_algebra.Transformation2D_swigregister(Transformation2D)
2334 r"""get_identity_transformation_2d() -> Transformation2D"""
2335 return _IMP_algebra.get_identity_transformation_2d()
2339 get_rotation_about_point(Vector3D point, Rotation3D rotation) -> Transformation3D
2340 get_rotation_about_point(Vector2D point, Rotation2D rotation) -> Transformation2D
2342 return _IMP_algebra.get_rotation_about_point(*args)
2346 compose(Rotation3D a, Rotation3D b) -> Rotation3D
2347 compose(Transformation3D a, Transformation3D b) -> Transformation3D
2348 compose(Rotation2D a, Rotation2D b) -> Rotation2D
2349 compose(Transformation2D a, Transformation2D b) -> Transformation2D
2351 return _IMP_algebra.compose(*args)
2353 def get_unit_sphere_kd(d):
2354 r"""get_unit_sphere_kd(unsigned int d) -> SphereKD"""
2355 return _IMP_algebra.get_unit_sphere_kd(d)
2359 get_enclosing_sphere(IMP::algebra::Sphere3Ds const & ss) -> Sphere3D
2360 get_enclosing_sphere(IMP::algebra::Vector3Ds const & ss) -> Sphere3D
2362 return _IMP_algebra.get_enclosing_sphere(*args)
2365 r"""get_ball_radius_from_volume_3d(double volume) -> double"""
2366 return _IMP_algebra.get_ball_radius_from_volume_3d(volume)
2369 r"""get_surface_area_and_volume(IMP::algebra::Sphere3Ds const & ss) -> IMP::FloatPair"""
2370 return _IMP_algebra.get_surface_area_and_volume(ss)
2373 r"""get_simplified_from_volume(IMP::algebra::Sphere3Ds _in, double maximum_allowed_error_angstroms) -> IMP::algebra::Sphere3Ds"""
2374 return _IMP_algebra.get_simplified_from_volume(_in, maximum_allowed_error_angstroms)
2376 def get_triangle_3d(s):
2377 r"""get_triangle_3d(UnitSimplex3D s) -> Triangle3D"""
2378 return _IMP_algebra.get_triangle_3d(s)
2379 class _UnitSimplexBaseKD(_GeometricPrimitiveKD):
2380 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< -1 > class."""
2382 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2384 def __init__(self, *args, **kwargs):
2385 raise AttributeError(
"No constructor defined - class is abstract")
2386 __repr__ = _swig_repr
2388 def get_dimension(self):
2389 r"""get_dimension(_UnitSimplexBaseKD self) -> int"""
2390 return _IMP_algebra._UnitSimplexBaseKD_get_dimension(self)
2392 def get_barycenter(self):
2393 r"""get_barycenter(_UnitSimplexBaseKD self) -> VectorKD"""
2394 return _IMP_algebra._UnitSimplexBaseKD_get_barycenter(self)
2396 def get_contains(self, *args):
2397 r"""get_contains(_UnitSimplexBaseKD self, VectorKD p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
2398 return _IMP_algebra._UnitSimplexBaseKD_get_contains(self, *args)
2399 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBaseKD
2402 _IMP_algebra._UnitSimplexBaseKD_swigregister(_UnitSimplexBaseKD)
2403 class _UnitSimplexBase1D(_GeometricPrimitive1D):
2404 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 1 > class."""
2406 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2408 def __init__(self, *args, **kwargs):
2409 raise AttributeError(
"No constructor defined - class is abstract")
2410 __repr__ = _swig_repr
2412 def get_dimension(self):
2413 r"""get_dimension(_UnitSimplexBase1D self) -> int"""
2414 return _IMP_algebra._UnitSimplexBase1D_get_dimension(self)
2416 def get_barycenter(self):
2417 r"""get_barycenter(_UnitSimplexBase1D self) -> Vector1D"""
2418 return _IMP_algebra._UnitSimplexBase1D_get_barycenter(self)
2420 def get_contains(self, *args):
2421 r"""get_contains(_UnitSimplexBase1D self, Vector1D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
2422 return _IMP_algebra._UnitSimplexBase1D_get_contains(self, *args)
2423 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase1D
2426 _IMP_algebra._UnitSimplexBase1D_swigregister(_UnitSimplexBase1D)
2427 class _UnitSimplexBase2D(_GeometricPrimitive2D):
2428 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 2 > class."""
2430 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2432 def __init__(self, *args, **kwargs):
2433 raise AttributeError(
"No constructor defined - class is abstract")
2434 __repr__ = _swig_repr
2436 def get_dimension(self):
2437 r"""get_dimension(_UnitSimplexBase2D self) -> int"""
2438 return _IMP_algebra._UnitSimplexBase2D_get_dimension(self)
2440 def get_barycenter(self):
2441 r"""get_barycenter(_UnitSimplexBase2D self) -> Vector2D"""
2442 return _IMP_algebra._UnitSimplexBase2D_get_barycenter(self)
2444 def get_contains(self, *args):
2445 r"""get_contains(_UnitSimplexBase2D self, Vector2D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
2446 return _IMP_algebra._UnitSimplexBase2D_get_contains(self, *args)
2447 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase2D
2450 _IMP_algebra._UnitSimplexBase2D_swigregister(_UnitSimplexBase2D)
2451 class _UnitSimplexBase3D(_GeometricPrimitive3D):
2452 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 3 > class."""
2454 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2456 def __init__(self, *args, **kwargs):
2457 raise AttributeError(
"No constructor defined - class is abstract")
2458 __repr__ = _swig_repr
2460 def get_dimension(self):
2461 r"""get_dimension(_UnitSimplexBase3D self) -> int"""
2462 return _IMP_algebra._UnitSimplexBase3D_get_dimension(self)
2464 def get_barycenter(self):
2465 r"""get_barycenter(_UnitSimplexBase3D self) -> Vector3D"""
2466 return _IMP_algebra._UnitSimplexBase3D_get_barycenter(self)
2468 def get_contains(self, *args):
2469 r"""get_contains(_UnitSimplexBase3D self, Vector3D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
2470 return _IMP_algebra._UnitSimplexBase3D_get_contains(self, *args)
2471 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase3D
2474 _IMP_algebra._UnitSimplexBase3D_swigregister(_UnitSimplexBase3D)
2475 class _UnitSimplexBase4D(_GeometricPrimitive4D):
2476 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 4 > class."""
2478 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2480 def __init__(self, *args, **kwargs):
2481 raise AttributeError(
"No constructor defined - class is abstract")
2482 __repr__ = _swig_repr
2484 def get_dimension(self):
2485 r"""get_dimension(_UnitSimplexBase4D self) -> int"""
2486 return _IMP_algebra._UnitSimplexBase4D_get_dimension(self)
2488 def get_barycenter(self):
2489 r"""get_barycenter(_UnitSimplexBase4D self) -> Vector4D"""
2490 return _IMP_algebra._UnitSimplexBase4D_get_barycenter(self)
2492 def get_contains(self, *args):
2493 r"""get_contains(_UnitSimplexBase4D self, Vector4D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
2494 return _IMP_algebra._UnitSimplexBase4D_get_contains(self, *args)
2495 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase4D
2498 _IMP_algebra._UnitSimplexBase4D_swigregister(_UnitSimplexBase4D)
2499 class _UnitSimplexBase5D(_GeometricPrimitive5D):
2500 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 5 > class."""
2502 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2504 def __init__(self, *args, **kwargs):
2505 raise AttributeError(
"No constructor defined - class is abstract")
2506 __repr__ = _swig_repr
2508 def get_dimension(self):
2509 r"""get_dimension(_UnitSimplexBase5D self) -> int"""
2510 return _IMP_algebra._UnitSimplexBase5D_get_dimension(self)
2512 def get_barycenter(self):
2513 r"""get_barycenter(_UnitSimplexBase5D self) -> Vector5D"""
2514 return _IMP_algebra._UnitSimplexBase5D_get_barycenter(self)
2516 def get_contains(self, *args):
2517 r"""get_contains(_UnitSimplexBase5D self, Vector5D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
2518 return _IMP_algebra._UnitSimplexBase5D_get_contains(self, *args)
2519 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase5D
2522 _IMP_algebra._UnitSimplexBase5D_swigregister(_UnitSimplexBase5D)
2523 class _UnitSimplexBase6D(_GeometricPrimitive6D):
2524 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 6 > class."""
2526 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2528 def __init__(self, *args, **kwargs):
2529 raise AttributeError(
"No constructor defined - class is abstract")
2530 __repr__ = _swig_repr
2532 def get_dimension(self):
2533 r"""get_dimension(_UnitSimplexBase6D self) -> int"""
2534 return _IMP_algebra._UnitSimplexBase6D_get_dimension(self)
2536 def get_barycenter(self):
2537 r"""get_barycenter(_UnitSimplexBase6D self) -> Vector6D"""
2538 return _IMP_algebra._UnitSimplexBase6D_get_barycenter(self)
2540 def get_contains(self, *args):
2541 r"""get_contains(_UnitSimplexBase6D self, Vector6D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
2542 return _IMP_algebra._UnitSimplexBase6D_get_contains(self, *args)
2543 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase6D
2546 _IMP_algebra._UnitSimplexBase6D_swigregister(_UnitSimplexBase6D)
2548 r"""Proxy of C++ IMP::algebra::VectorD< 1 > class."""
2550 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2553 r"""get_unit_vector(Vector1D self) -> Vector1D"""
2554 return _IMP_algebra.Vector1D_get_unit_vector(self)
2556 def __truediv__(self, *args):
2557 return _IMP_algebra.Vector1D___truediv__(self, *args)
2558 __div__ = __truediv__
2563 r"""__neg__(Vector1D self) -> Vector1D"""
2564 return _IMP_algebra.Vector1D___neg__(self)
2566 def __sub__(self, o):
2567 r"""__sub__(Vector1D self, Vector1D o) -> Vector1D"""
2568 return _IMP_algebra.Vector1D___sub__(self, o)
2570 def __add__(self, ret):
2571 r"""__add__(Vector1D self, Vector1D ret) -> Vector1D"""
2572 return _IMP_algebra.Vector1D___add__(self, ret)
2574 def __mul__(self, *args):
2576 __mul__(Vector1D self, double s) -> Vector1D
2577 __mul__(Vector1D self, Vector1D o) -> double
2579 return _IMP_algebra.Vector1D___mul__(self, *args)
2581 def __init__(self, *args):
2583 __init__(Vector1D self, IMP::Floats const & f) -> Vector1D
2584 __init__(Vector1D self) -> Vector1D
2585 __init__(Vector1D self, double x) -> Vector1D
2587 _IMP_algebra.Vector1D_swiginit(self, _IMP_algebra.new_Vector1D(*args))
2589 def __iadd__(self, *args):
2590 _IMP_algebra.Vector1D___iadd__(self, *args)
2595 def __imul__(self, *args):
2596 _IMP_algebra.Vector1D___imul__(self, *args)
2601 def __idiv__(self, *args):
2602 _IMP_algebra.Vector1D___idiv__(self, *args)
2607 def __isub__(self, *args):
2608 _IMP_algebra.Vector1D___isub__(self, *args)
2614 r"""__len__(Vector1D self) -> unsigned int"""
2615 return _IMP_algebra.Vector1D___len__(self)
2617 def __rmul__(self, f):
2618 r"""__rmul__(Vector1D self, double f) -> Vector1D"""
2619 return _IMP_algebra.Vector1D___rmul__(self, f)
2622 r"""__str__(Vector1D self) -> std::string"""
2623 return _IMP_algebra.Vector1D___str__(self)
2626 r"""__repr__(Vector1D self) -> std::string"""
2627 return _IMP_algebra.Vector1D___repr__(self)
2629 def __cmp__(self, arg2):
2630 r"""__cmp__(Vector1D self, Vector1D arg2) -> int"""
2631 return _IMP_algebra.Vector1D___cmp__(self, arg2)
2633 def __eq__(self, arg2):
2634 r"""__eq__(Vector1D self, Vector1D arg2) -> bool"""
2635 return _IMP_algebra.Vector1D___eq__(self, arg2)
2637 __truediv__ = __div__
2638 __itruediv__ = __idiv__
2641 def _get_as_binary(self):
2642 r"""_get_as_binary(Vector1D self) -> PyObject *"""
2643 return _IMP_algebra.Vector1D__get_as_binary(self)
2645 def _set_from_binary(self, p):
2646 r"""_set_from_binary(Vector1D self, PyObject * p)"""
2647 return _IMP_algebra.Vector1D__set_from_binary(self, p)
2649 def __getstate__(self):
2650 p = self._get_as_binary()
2651 if len(self.__dict__) > 1:
2652 d = self.__dict__.copy()
2657 def __setstate__(self, p):
2658 if not hasattr(self,
'this'):
2660 if isinstance(p, tuple):
2662 self.__dict__.update(d)
2663 return self._set_from_binary(p)
2666 def __getitem__(self, index):
2667 r"""__getitem__(Vector1D self, int index) -> double"""
2668 return _IMP_algebra.Vector1D___getitem__(self, index)
2670 def __setitem__(self, index, val):
2671 r"""__setitem__(Vector1D self, int index, double val)"""
2672 return _IMP_algebra.Vector1D___setitem__(self, index, val)
2673 __swig_destroy__ = _IMP_algebra.delete_Vector1D
2676 _IMP_algebra.Vector1D_swigregister(Vector1D)
2678 r"""Proxy of C++ IMP::algebra::VectorD< 2 > class."""
2680 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2683 r"""get_unit_vector(Vector2D self) -> Vector2D"""
2684 return _IMP_algebra.Vector2D_get_unit_vector(self)
2686 def __truediv__(self, *args):
2687 return _IMP_algebra.Vector2D___truediv__(self, *args)
2688 __div__ = __truediv__
2693 r"""__neg__(Vector2D self) -> Vector2D"""
2694 return _IMP_algebra.Vector2D___neg__(self)
2696 def __sub__(self, o):
2697 r"""__sub__(Vector2D self, Vector2D o) -> Vector2D"""
2698 return _IMP_algebra.Vector2D___sub__(self, o)
2700 def __add__(self, ret):
2701 r"""__add__(Vector2D self, Vector2D ret) -> Vector2D"""
2702 return _IMP_algebra.Vector2D___add__(self, ret)
2704 def __mul__(self, *args):
2706 __mul__(Vector2D self, double s) -> Vector2D
2707 __mul__(Vector2D self, Vector2D o) -> double
2709 return _IMP_algebra.Vector2D___mul__(self, *args)
2711 def __init__(self, *args):
2713 __init__(Vector2D self, IMP::Floats const & f) -> Vector2D
2714 __init__(Vector2D self) -> Vector2D
2715 __init__(Vector2D self, double x, double y) -> Vector2D
2717 _IMP_algebra.Vector2D_swiginit(self, _IMP_algebra.new_Vector2D(*args))
2719 def __iadd__(self, *args):
2720 _IMP_algebra.Vector2D___iadd__(self, *args)
2725 def __imul__(self, *args):
2726 _IMP_algebra.Vector2D___imul__(self, *args)
2731 def __idiv__(self, *args):
2732 _IMP_algebra.Vector2D___idiv__(self, *args)
2737 def __isub__(self, *args):
2738 _IMP_algebra.Vector2D___isub__(self, *args)
2744 r"""__len__(Vector2D self) -> unsigned int"""
2745 return _IMP_algebra.Vector2D___len__(self)
2747 def __rmul__(self, f):
2748 r"""__rmul__(Vector2D self, double f) -> Vector2D"""
2749 return _IMP_algebra.Vector2D___rmul__(self, f)
2752 r"""__str__(Vector2D self) -> std::string"""
2753 return _IMP_algebra.Vector2D___str__(self)
2756 r"""__repr__(Vector2D self) -> std::string"""
2757 return _IMP_algebra.Vector2D___repr__(self)
2759 def __cmp__(self, arg2):
2760 r"""__cmp__(Vector2D self, Vector2D arg2) -> int"""
2761 return _IMP_algebra.Vector2D___cmp__(self, arg2)
2763 def __eq__(self, arg2):
2764 r"""__eq__(Vector2D self, Vector2D arg2) -> bool"""
2765 return _IMP_algebra.Vector2D___eq__(self, arg2)
2767 __truediv__ = __div__
2768 __itruediv__ = __idiv__
2771 def _get_as_binary(self):
2772 r"""_get_as_binary(Vector2D self) -> PyObject *"""
2773 return _IMP_algebra.Vector2D__get_as_binary(self)
2775 def _set_from_binary(self, p):
2776 r"""_set_from_binary(Vector2D self, PyObject * p)"""
2777 return _IMP_algebra.Vector2D__set_from_binary(self, p)
2779 def __getstate__(self):
2780 p = self._get_as_binary()
2781 if len(self.__dict__) > 1:
2782 d = self.__dict__.copy()
2787 def __setstate__(self, p):
2788 if not hasattr(self,
'this'):
2790 if isinstance(p, tuple):
2792 self.__dict__.update(d)
2793 return self._set_from_binary(p)
2796 def __getitem__(self, index):
2797 r"""__getitem__(Vector2D self, int index) -> double"""
2798 return _IMP_algebra.Vector2D___getitem__(self, index)
2800 def __setitem__(self, index, val):
2801 r"""__setitem__(Vector2D self, int index, double val)"""
2802 return _IMP_algebra.Vector2D___setitem__(self, index, val)
2803 __swig_destroy__ = _IMP_algebra.delete_Vector2D
2806 _IMP_algebra.Vector2D_swigregister(Vector2D)
2808 r"""Proxy of C++ IMP::algebra::VectorD< 3 > class."""
2810 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2813 r"""get_unit_vector(Vector3D self) -> Vector3D"""
2814 return _IMP_algebra.Vector3D_get_unit_vector(self)
2816 def __truediv__(self, *args):
2817 return _IMP_algebra.Vector3D___truediv__(self, *args)
2818 __div__ = __truediv__
2823 r"""__neg__(Vector3D self) -> Vector3D"""
2824 return _IMP_algebra.Vector3D___neg__(self)
2826 def __sub__(self, o):
2827 r"""__sub__(Vector3D self, Vector3D o) -> Vector3D"""
2828 return _IMP_algebra.Vector3D___sub__(self, o)
2830 def __add__(self, ret):
2831 r"""__add__(Vector3D self, Vector3D ret) -> Vector3D"""
2832 return _IMP_algebra.Vector3D___add__(self, ret)
2834 def __mul__(self, *args):
2836 __mul__(Vector3D self, double s) -> Vector3D
2837 __mul__(Vector3D self, Vector3D o) -> double
2839 return _IMP_algebra.Vector3D___mul__(self, *args)
2841 def __init__(self, *args):
2843 __init__(Vector3D self, IMP::Floats const & f) -> Vector3D
2844 __init__(Vector3D self) -> Vector3D
2845 __init__(Vector3D self, double x, double y, double z) -> Vector3D
2847 _IMP_algebra.Vector3D_swiginit(self, _IMP_algebra.new_Vector3D(*args))
2849 def __iadd__(self, *args):
2850 _IMP_algebra.Vector3D___iadd__(self, *args)
2855 def __imul__(self, *args):
2856 _IMP_algebra.Vector3D___imul__(self, *args)
2861 def __idiv__(self, *args):
2862 _IMP_algebra.Vector3D___idiv__(self, *args)
2867 def __isub__(self, *args):
2868 _IMP_algebra.Vector3D___isub__(self, *args)
2874 r"""__len__(Vector3D self) -> unsigned int"""
2875 return _IMP_algebra.Vector3D___len__(self)
2877 def __rmul__(self, f):
2878 r"""__rmul__(Vector3D self, double f) -> Vector3D"""
2879 return _IMP_algebra.Vector3D___rmul__(self, f)
2882 r"""__str__(Vector3D self) -> std::string"""
2883 return _IMP_algebra.Vector3D___str__(self)
2886 r"""__repr__(Vector3D self) -> std::string"""
2887 return _IMP_algebra.Vector3D___repr__(self)
2889 def __cmp__(self, arg2):
2890 r"""__cmp__(Vector3D self, Vector3D arg2) -> int"""
2891 return _IMP_algebra.Vector3D___cmp__(self, arg2)
2893 def __eq__(self, arg2):
2894 r"""__eq__(Vector3D self, Vector3D arg2) -> bool"""
2895 return _IMP_algebra.Vector3D___eq__(self, arg2)
2897 __truediv__ = __div__
2898 __itruediv__ = __idiv__
2901 def _get_as_binary(self):
2902 r"""_get_as_binary(Vector3D self) -> PyObject *"""
2903 return _IMP_algebra.Vector3D__get_as_binary(self)
2905 def _set_from_binary(self, p):
2906 r"""_set_from_binary(Vector3D self, PyObject * p)"""
2907 return _IMP_algebra.Vector3D__set_from_binary(self, p)
2909 def __getstate__(self):
2910 p = self._get_as_binary()
2911 if len(self.__dict__) > 1:
2912 d = self.__dict__.copy()
2917 def __setstate__(self, p):
2918 if not hasattr(self,
'this'):
2920 if isinstance(p, tuple):
2922 self.__dict__.update(d)
2923 return self._set_from_binary(p)
2926 def __getitem__(self, index):
2927 r"""__getitem__(Vector3D self, int index) -> double"""
2928 return _IMP_algebra.Vector3D___getitem__(self, index)
2930 def __setitem__(self, index, val):
2931 r"""__setitem__(Vector3D self, int index, double val)"""
2932 return _IMP_algebra.Vector3D___setitem__(self, index, val)
2933 __swig_destroy__ = _IMP_algebra.delete_Vector3D
2936 _IMP_algebra.Vector3D_swigregister(Vector3D)
2938 r"""Proxy of C++ IMP::algebra::VectorD< 4 > class."""
2940 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2943 r"""get_unit_vector(Vector4D self) -> Vector4D"""
2944 return _IMP_algebra.Vector4D_get_unit_vector(self)
2946 def __truediv__(self, *args):
2947 return _IMP_algebra.Vector4D___truediv__(self, *args)
2948 __div__ = __truediv__
2953 r"""__neg__(Vector4D self) -> Vector4D"""
2954 return _IMP_algebra.Vector4D___neg__(self)
2956 def __sub__(self, o):
2957 r"""__sub__(Vector4D self, Vector4D o) -> Vector4D"""
2958 return _IMP_algebra.Vector4D___sub__(self, o)
2960 def __add__(self, ret):
2961 r"""__add__(Vector4D self, Vector4D ret) -> Vector4D"""
2962 return _IMP_algebra.Vector4D___add__(self, ret)
2964 def __mul__(self, *args):
2966 __mul__(Vector4D self, double s) -> Vector4D
2967 __mul__(Vector4D self, Vector4D o) -> double
2969 return _IMP_algebra.Vector4D___mul__(self, *args)
2971 def __init__(self, *args):
2973 __init__(Vector4D self, IMP::Floats const & f) -> Vector4D
2974 __init__(Vector4D self) -> Vector4D
2975 __init__(Vector4D self, double x0, double x1, double x2, double x3) -> Vector4D
2977 _IMP_algebra.Vector4D_swiginit(self, _IMP_algebra.new_Vector4D(*args))
2979 def __iadd__(self, *args):
2980 _IMP_algebra.Vector4D___iadd__(self, *args)
2985 def __imul__(self, *args):
2986 _IMP_algebra.Vector4D___imul__(self, *args)
2991 def __idiv__(self, *args):
2992 _IMP_algebra.Vector4D___idiv__(self, *args)
2997 def __isub__(self, *args):
2998 _IMP_algebra.Vector4D___isub__(self, *args)
3004 r"""__len__(Vector4D self) -> unsigned int"""
3005 return _IMP_algebra.Vector4D___len__(self)
3007 def __rmul__(self, f):
3008 r"""__rmul__(Vector4D self, double f) -> Vector4D"""
3009 return _IMP_algebra.Vector4D___rmul__(self, f)
3012 r"""__str__(Vector4D self) -> std::string"""
3013 return _IMP_algebra.Vector4D___str__(self)
3016 r"""__repr__(Vector4D self) -> std::string"""
3017 return _IMP_algebra.Vector4D___repr__(self)
3019 def __cmp__(self, arg2):
3020 r"""__cmp__(Vector4D self, Vector4D arg2) -> int"""
3021 return _IMP_algebra.Vector4D___cmp__(self, arg2)
3023 def __eq__(self, arg2):
3024 r"""__eq__(Vector4D self, Vector4D arg2) -> bool"""
3025 return _IMP_algebra.Vector4D___eq__(self, arg2)
3027 __truediv__ = __div__
3028 __itruediv__ = __idiv__
3031 def _get_as_binary(self):
3032 r"""_get_as_binary(Vector4D self) -> PyObject *"""
3033 return _IMP_algebra.Vector4D__get_as_binary(self)
3035 def _set_from_binary(self, p):
3036 r"""_set_from_binary(Vector4D self, PyObject * p)"""
3037 return _IMP_algebra.Vector4D__set_from_binary(self, p)
3039 def __getstate__(self):
3040 p = self._get_as_binary()
3041 if len(self.__dict__) > 1:
3042 d = self.__dict__.copy()
3047 def __setstate__(self, p):
3048 if not hasattr(self,
'this'):
3050 if isinstance(p, tuple):
3052 self.__dict__.update(d)
3053 return self._set_from_binary(p)
3056 def __getitem__(self, index):
3057 r"""__getitem__(Vector4D self, int index) -> double"""
3058 return _IMP_algebra.Vector4D___getitem__(self, index)
3060 def __setitem__(self, index, val):
3061 r"""__setitem__(Vector4D self, int index, double val)"""
3062 return _IMP_algebra.Vector4D___setitem__(self, index, val)
3063 __swig_destroy__ = _IMP_algebra.delete_Vector4D
3066 _IMP_algebra.Vector4D_swigregister(Vector4D)
3068 r"""Proxy of C++ IMP::algebra::VectorD< 5 > class."""
3070 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3073 r"""get_unit_vector(Vector5D self) -> Vector5D"""
3074 return _IMP_algebra.Vector5D_get_unit_vector(self)
3076 def __truediv__(self, *args):
3077 return _IMP_algebra.Vector5D___truediv__(self, *args)
3078 __div__ = __truediv__
3083 r"""__neg__(Vector5D self) -> Vector5D"""
3084 return _IMP_algebra.Vector5D___neg__(self)
3086 def __sub__(self, o):
3087 r"""__sub__(Vector5D self, Vector5D o) -> Vector5D"""
3088 return _IMP_algebra.Vector5D___sub__(self, o)
3090 def __add__(self, ret):
3091 r"""__add__(Vector5D self, Vector5D ret) -> Vector5D"""
3092 return _IMP_algebra.Vector5D___add__(self, ret)
3094 def __mul__(self, *args):
3096 __mul__(Vector5D self, double s) -> Vector5D
3097 __mul__(Vector5D self, Vector5D o) -> double
3099 return _IMP_algebra.Vector5D___mul__(self, *args)
3101 def __init__(self, *args):
3103 __init__(Vector5D self, IMP::Floats const & f) -> Vector5D
3104 __init__(Vector5D self) -> Vector5D
3105 __init__(Vector5D self, double x0, double x1, double x2, double x3, double x4) -> Vector5D
3107 _IMP_algebra.Vector5D_swiginit(self, _IMP_algebra.new_Vector5D(*args))
3109 def __iadd__(self, *args):
3110 _IMP_algebra.Vector5D___iadd__(self, *args)
3115 def __imul__(self, *args):
3116 _IMP_algebra.Vector5D___imul__(self, *args)
3121 def __idiv__(self, *args):
3122 _IMP_algebra.Vector5D___idiv__(self, *args)
3127 def __isub__(self, *args):
3128 _IMP_algebra.Vector5D___isub__(self, *args)
3134 r"""__len__(Vector5D self) -> unsigned int"""
3135 return _IMP_algebra.Vector5D___len__(self)
3137 def __rmul__(self, f):
3138 r"""__rmul__(Vector5D self, double f) -> Vector5D"""
3139 return _IMP_algebra.Vector5D___rmul__(self, f)
3142 r"""__str__(Vector5D self) -> std::string"""
3143 return _IMP_algebra.Vector5D___str__(self)
3146 r"""__repr__(Vector5D self) -> std::string"""
3147 return _IMP_algebra.Vector5D___repr__(self)
3149 def __cmp__(self, arg2):
3150 r"""__cmp__(Vector5D self, Vector5D arg2) -> int"""
3151 return _IMP_algebra.Vector5D___cmp__(self, arg2)
3153 def __eq__(self, arg2):
3154 r"""__eq__(Vector5D self, Vector5D arg2) -> bool"""
3155 return _IMP_algebra.Vector5D___eq__(self, arg2)
3157 __truediv__ = __div__
3158 __itruediv__ = __idiv__
3161 def _get_as_binary(self):
3162 r"""_get_as_binary(Vector5D self) -> PyObject *"""
3163 return _IMP_algebra.Vector5D__get_as_binary(self)
3165 def _set_from_binary(self, p):
3166 r"""_set_from_binary(Vector5D self, PyObject * p)"""
3167 return _IMP_algebra.Vector5D__set_from_binary(self, p)
3169 def __getstate__(self):
3170 p = self._get_as_binary()
3171 if len(self.__dict__) > 1:
3172 d = self.__dict__.copy()
3177 def __setstate__(self, p):
3178 if not hasattr(self,
'this'):
3180 if isinstance(p, tuple):
3182 self.__dict__.update(d)
3183 return self._set_from_binary(p)
3186 def __getitem__(self, index):
3187 r"""__getitem__(Vector5D self, int index) -> double"""
3188 return _IMP_algebra.Vector5D___getitem__(self, index)
3190 def __setitem__(self, index, val):
3191 r"""__setitem__(Vector5D self, int index, double val)"""
3192 return _IMP_algebra.Vector5D___setitem__(self, index, val)
3193 __swig_destroy__ = _IMP_algebra.delete_Vector5D
3196 _IMP_algebra.Vector5D_swigregister(Vector5D)
3198 r"""Proxy of C++ IMP::algebra::VectorD< 6 > class."""
3200 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3203 r"""get_unit_vector(Vector6D self) -> Vector6D"""
3204 return _IMP_algebra.Vector6D_get_unit_vector(self)
3206 def __truediv__(self, *args):
3207 return _IMP_algebra.Vector6D___truediv__(self, *args)
3208 __div__ = __truediv__
3213 r"""__neg__(Vector6D self) -> Vector6D"""
3214 return _IMP_algebra.Vector6D___neg__(self)
3216 def __sub__(self, o):
3217 r"""__sub__(Vector6D self, Vector6D o) -> Vector6D"""
3218 return _IMP_algebra.Vector6D___sub__(self, o)
3220 def __add__(self, ret):
3221 r"""__add__(Vector6D self, Vector6D ret) -> Vector6D"""
3222 return _IMP_algebra.Vector6D___add__(self, ret)
3224 def __mul__(self, *args):
3226 __mul__(Vector6D self, double s) -> Vector6D
3227 __mul__(Vector6D self, Vector6D o) -> double
3229 return _IMP_algebra.Vector6D___mul__(self, *args)
3231 def __init__(self, *args):
3233 __init__(Vector6D self, IMP::Floats const & f) -> Vector6D
3234 __init__(Vector6D self) -> Vector6D
3235 __init__(Vector6D self, double x0, double x1, double x2, double x3, double x4, double x5) -> Vector6D
3237 _IMP_algebra.Vector6D_swiginit(self, _IMP_algebra.new_Vector6D(*args))
3239 def __iadd__(self, *args):
3240 _IMP_algebra.Vector6D___iadd__(self, *args)
3245 def __imul__(self, *args):
3246 _IMP_algebra.Vector6D___imul__(self, *args)
3251 def __idiv__(self, *args):
3252 _IMP_algebra.Vector6D___idiv__(self, *args)
3257 def __isub__(self, *args):
3258 _IMP_algebra.Vector6D___isub__(self, *args)
3264 r"""__len__(Vector6D self) -> unsigned int"""
3265 return _IMP_algebra.Vector6D___len__(self)
3267 def __rmul__(self, f):
3268 r"""__rmul__(Vector6D self, double f) -> Vector6D"""
3269 return _IMP_algebra.Vector6D___rmul__(self, f)
3272 r"""__str__(Vector6D self) -> std::string"""
3273 return _IMP_algebra.Vector6D___str__(self)
3276 r"""__repr__(Vector6D self) -> std::string"""
3277 return _IMP_algebra.Vector6D___repr__(self)
3279 def __cmp__(self, arg2):
3280 r"""__cmp__(Vector6D self, Vector6D arg2) -> int"""
3281 return _IMP_algebra.Vector6D___cmp__(self, arg2)
3283 def __eq__(self, arg2):
3284 r"""__eq__(Vector6D self, Vector6D arg2) -> bool"""
3285 return _IMP_algebra.Vector6D___eq__(self, arg2)
3287 __truediv__ = __div__
3288 __itruediv__ = __idiv__
3291 def _get_as_binary(self):
3292 r"""_get_as_binary(Vector6D self) -> PyObject *"""
3293 return _IMP_algebra.Vector6D__get_as_binary(self)
3295 def _set_from_binary(self, p):
3296 r"""_set_from_binary(Vector6D self, PyObject * p)"""
3297 return _IMP_algebra.Vector6D__set_from_binary(self, p)
3299 def __getstate__(self):
3300 p = self._get_as_binary()
3301 if len(self.__dict__) > 1:
3302 d = self.__dict__.copy()
3307 def __setstate__(self, p):
3308 if not hasattr(self,
'this'):
3310 if isinstance(p, tuple):
3312 self.__dict__.update(d)
3313 return self._set_from_binary(p)
3316 def __getitem__(self, index):
3317 r"""__getitem__(Vector6D self, int index) -> double"""
3318 return _IMP_algebra.Vector6D___getitem__(self, index)
3320 def __setitem__(self, index, val):
3321 r"""__setitem__(Vector6D self, int index, double val)"""
3322 return _IMP_algebra.Vector6D___setitem__(self, index, val)
3323 __swig_destroy__ = _IMP_algebra.delete_Vector6D
3326 _IMP_algebra.Vector6D_swigregister(Vector6D)
3328 r"""Proxy of C++ IMP::algebra::VectorD< -1 > class."""
3330 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3333 r"""get_unit_vector(VectorKD self) -> VectorKD"""
3334 return _IMP_algebra.VectorKD_get_unit_vector(self)
3336 def __truediv__(self, *args):
3337 return _IMP_algebra.VectorKD___truediv__(self, *args)
3338 __div__ = __truediv__
3343 r"""__neg__(VectorKD self) -> VectorKD"""
3344 return _IMP_algebra.VectorKD___neg__(self)
3346 def __sub__(self, o):
3347 r"""__sub__(VectorKD self, VectorKD o) -> VectorKD"""
3348 return _IMP_algebra.VectorKD___sub__(self, o)
3350 def __add__(self, ret):
3351 r"""__add__(VectorKD self, VectorKD ret) -> VectorKD"""
3352 return _IMP_algebra.VectorKD___add__(self, ret)
3354 def __mul__(self, *args):
3356 __mul__(VectorKD self, double s) -> VectorKD
3357 __mul__(VectorKD self, VectorKD o) -> double
3359 return _IMP_algebra.VectorKD___mul__(self, *args)
3361 def __init__(self, *args):
3363 __init__(VectorKD self, IMP::Floats const & f) -> VectorKD
3364 __init__(VectorKD self) -> VectorKD
3365 __init__(VectorKD self, double x0, double x1=std::numeric_limits< double >::max(), double x2=std::numeric_limits< double >::max(), double x3=std::numeric_limits< double >::max(), double x4=std::numeric_limits< double >::max(), double x5=std::numeric_limits< double >::max()) -> VectorKD
3367 _IMP_algebra.VectorKD_swiginit(self, _IMP_algebra.new_VectorKD(*args))
3369 def __iadd__(self, *args):
3370 _IMP_algebra.VectorKD___iadd__(self, *args)
3375 def __imul__(self, *args):
3376 _IMP_algebra.VectorKD___imul__(self, *args)
3381 def __idiv__(self, *args):
3382 _IMP_algebra.VectorKD___idiv__(self, *args)
3387 def __isub__(self, *args):
3388 _IMP_algebra.VectorKD___isub__(self, *args)
3394 r"""__len__(VectorKD self) -> unsigned int"""
3395 return _IMP_algebra.VectorKD___len__(self)
3397 def __rmul__(self, f):
3398 r"""__rmul__(VectorKD self, double f) -> VectorKD"""
3399 return _IMP_algebra.VectorKD___rmul__(self, f)
3402 r"""__str__(VectorKD self) -> std::string"""
3403 return _IMP_algebra.VectorKD___str__(self)
3406 r"""__repr__(VectorKD self) -> std::string"""
3407 return _IMP_algebra.VectorKD___repr__(self)
3409 def __cmp__(self, arg2):
3410 r"""__cmp__(VectorKD self, VectorKD arg2) -> int"""
3411 return _IMP_algebra.VectorKD___cmp__(self, arg2)
3413 def __eq__(self, arg2):
3414 r"""__eq__(VectorKD self, VectorKD arg2) -> bool"""
3415 return _IMP_algebra.VectorKD___eq__(self, arg2)
3417 __truediv__ = __div__
3418 __itruediv__ = __idiv__
3421 def _get_as_binary(self):
3422 r"""_get_as_binary(VectorKD self) -> PyObject *"""
3423 return _IMP_algebra.VectorKD__get_as_binary(self)
3425 def _set_from_binary(self, p):
3426 r"""_set_from_binary(VectorKD self, PyObject * p)"""
3427 return _IMP_algebra.VectorKD__set_from_binary(self, p)
3429 def __getstate__(self):
3430 p = self._get_as_binary()
3431 if len(self.__dict__) > 1:
3432 d = self.__dict__.copy()
3437 def __setstate__(self, p):
3438 if not hasattr(self,
'this'):
3440 if isinstance(p, tuple):
3442 self.__dict__.update(d)
3443 return self._set_from_binary(p)
3446 def __getitem__(self, index):
3447 r"""__getitem__(VectorKD self, int index) -> double"""
3448 return _IMP_algebra.VectorKD___getitem__(self, index)
3450 def __setitem__(self, index, val):
3451 r"""__setitem__(VectorKD self, int index, double val)"""
3452 return _IMP_algebra.VectorKD___setitem__(self, index, val)
3453 __swig_destroy__ = _IMP_algebra.delete_VectorKD
3456 _IMP_algebra.VectorKD_swigregister(VectorKD)
3458 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 1 > class."""
3460 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3462 def get_dimension(self):
3463 r"""get_dimension(BoundingBox1D self) -> unsigned int"""
3464 return _IMP_algebra.BoundingBox1D_get_dimension(self)
3466 def get_corner(self, i):
3467 r"""get_corner(BoundingBox1D self, unsigned int i) -> Vector1D"""
3468 return _IMP_algebra.BoundingBox1D_get_corner(self, i)
3470 def get_contains(self, *args):
3472 get_contains(BoundingBox1D self, Vector1D o) -> bool
3473 get_contains(BoundingBox1D self, BoundingBox1D bb) -> bool
3475 return _IMP_algebra.BoundingBox1D_get_contains(self, *args)
3477 def show(self, *args):
3478 r"""show(BoundingBox1D self, _ostream out=std::cout)"""
3479 return _IMP_algebra.BoundingBox1D_show(self, *args)
3482 r"""__str__(BoundingBox1D self) -> std::string"""
3483 return _IMP_algebra.BoundingBox1D___str__(self)
3486 r"""__repr__(BoundingBox1D self) -> std::string"""
3487 return _IMP_algebra.BoundingBox1D___repr__(self)
3489 def __cmp__(self, arg2):
3490 r"""__cmp__(BoundingBox1D self, BoundingBox1D arg2) -> int"""
3491 return _IMP_algebra.BoundingBox1D___cmp__(self, arg2)
3493 def __eq__(self, arg2):
3494 r"""__eq__(BoundingBox1D self, BoundingBox1D arg2) -> bool"""
3495 return _IMP_algebra.BoundingBox1D___eq__(self, arg2)
3497 def __init__(self, *args):
3499 __init__(BoundingBox1D self, unsigned int d) -> BoundingBox1D
3500 __init__(BoundingBox1D self, Vector1D lb, Vector1D ub) -> BoundingBox1D
3501 __init__(BoundingBox1D self, Vector1D v) -> BoundingBox1D
3502 __init__(BoundingBox1D self, IMP::Vector< IMP::algebra::VectorD< 1 > > const & points) -> BoundingBox1D
3503 __init__(BoundingBox1D self) -> BoundingBox1D
3505 _IMP_algebra.BoundingBox1D_swiginit(self, _IMP_algebra.new_BoundingBox1D(*args))
3507 def __getitem__(self, index):
3508 r"""__getitem__(BoundingBox1D self, unsigned int index) -> Vector1D"""
3509 return _IMP_algebra.BoundingBox1D___getitem__(self, index)
3511 def __iadd__(self, *args):
3512 _IMP_algebra.BoundingBox1D___iadd__(self, *args)
3518 r"""__len__(BoundingBox1D self) -> unsigned int"""
3519 return _IMP_algebra.BoundingBox1D___len__(self)
3521 def __add__(self, *args):
3523 __add__(BoundingBox1D self, BoundingBox1D o) -> BoundingBox1D
3524 __add__(BoundingBox1D self, Vector1D o) -> BoundingBox1D
3525 __add__(BoundingBox1D self, double o) -> BoundingBox1D
3527 return _IMP_algebra.BoundingBox1D___add__(self, *args)
3529 def _get_as_binary(self):
3530 r"""_get_as_binary(BoundingBox1D self) -> PyObject *"""
3531 return _IMP_algebra.BoundingBox1D__get_as_binary(self)
3533 def _set_from_binary(self, p):
3534 r"""_set_from_binary(BoundingBox1D self, PyObject * p)"""
3535 return _IMP_algebra.BoundingBox1D__set_from_binary(self, p)
3537 def __getstate__(self):
3538 p = self._get_as_binary()
3539 if len(self.__dict__) > 1:
3540 d = self.__dict__.copy()
3545 def __setstate__(self, p):
3546 if not hasattr(self,
'this'):
3548 if isinstance(p, tuple):
3550 self.__dict__.update(d)
3551 return self._set_from_binary(p)
3553 __swig_destroy__ = _IMP_algebra.delete_BoundingBox1D
3556 _IMP_algebra.BoundingBox1D_swigregister(BoundingBox1D)
3558 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 2 > class."""
3560 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3562 def get_dimension(self):
3563 r"""get_dimension(BoundingBox2D self) -> unsigned int"""
3564 return _IMP_algebra.BoundingBox2D_get_dimension(self)
3566 def get_corner(self, i):
3567 r"""get_corner(BoundingBox2D self, unsigned int i) -> Vector2D"""
3568 return _IMP_algebra.BoundingBox2D_get_corner(self, i)
3570 def get_contains(self, *args):
3572 get_contains(BoundingBox2D self, Vector2D o) -> bool
3573 get_contains(BoundingBox2D self, BoundingBox2D bb) -> bool
3575 return _IMP_algebra.BoundingBox2D_get_contains(self, *args)
3577 def show(self, *args):
3578 r"""show(BoundingBox2D self, _ostream out=std::cout)"""
3579 return _IMP_algebra.BoundingBox2D_show(self, *args)
3582 r"""__str__(BoundingBox2D self) -> std::string"""
3583 return _IMP_algebra.BoundingBox2D___str__(self)
3586 r"""__repr__(BoundingBox2D self) -> std::string"""
3587 return _IMP_algebra.BoundingBox2D___repr__(self)
3589 def __cmp__(self, arg2):
3590 r"""__cmp__(BoundingBox2D self, BoundingBox2D arg2) -> int"""
3591 return _IMP_algebra.BoundingBox2D___cmp__(self, arg2)
3593 def __eq__(self, arg2):
3594 r"""__eq__(BoundingBox2D self, BoundingBox2D arg2) -> bool"""
3595 return _IMP_algebra.BoundingBox2D___eq__(self, arg2)
3597 def __init__(self, *args):
3599 __init__(BoundingBox2D self, unsigned int d) -> BoundingBox2D
3600 __init__(BoundingBox2D self, Vector2D lb, Vector2D ub) -> BoundingBox2D
3601 __init__(BoundingBox2D self, Vector2D v) -> BoundingBox2D
3602 __init__(BoundingBox2D self, IMP::Vector< IMP::algebra::VectorD< 2 > > const & points) -> BoundingBox2D
3603 __init__(BoundingBox2D self) -> BoundingBox2D
3605 _IMP_algebra.BoundingBox2D_swiginit(self, _IMP_algebra.new_BoundingBox2D(*args))
3607 def __getitem__(self, index):
3608 r"""__getitem__(BoundingBox2D self, unsigned int index) -> Vector2D"""
3609 return _IMP_algebra.BoundingBox2D___getitem__(self, index)
3611 def __iadd__(self, *args):
3612 _IMP_algebra.BoundingBox2D___iadd__(self, *args)
3618 r"""__len__(BoundingBox2D self) -> unsigned int"""
3619 return _IMP_algebra.BoundingBox2D___len__(self)
3621 def __add__(self, *args):
3623 __add__(BoundingBox2D self, BoundingBox2D o) -> BoundingBox2D
3624 __add__(BoundingBox2D self, Vector2D o) -> BoundingBox2D
3625 __add__(BoundingBox2D self, double o) -> BoundingBox2D
3627 return _IMP_algebra.BoundingBox2D___add__(self, *args)
3629 def _get_as_binary(self):
3630 r"""_get_as_binary(BoundingBox2D self) -> PyObject *"""
3631 return _IMP_algebra.BoundingBox2D__get_as_binary(self)
3633 def _set_from_binary(self, p):
3634 r"""_set_from_binary(BoundingBox2D self, PyObject * p)"""
3635 return _IMP_algebra.BoundingBox2D__set_from_binary(self, p)
3637 def __getstate__(self):
3638 p = self._get_as_binary()
3639 if len(self.__dict__) > 1:
3640 d = self.__dict__.copy()
3645 def __setstate__(self, p):
3646 if not hasattr(self,
'this'):
3648 if isinstance(p, tuple):
3650 self.__dict__.update(d)
3651 return self._set_from_binary(p)
3653 __swig_destroy__ = _IMP_algebra.delete_BoundingBox2D
3656 _IMP_algebra.BoundingBox2D_swigregister(BoundingBox2D)
3658 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 3 > class."""
3660 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3662 def get_dimension(self):
3663 r"""get_dimension(BoundingBox3D self) -> unsigned int"""
3664 return _IMP_algebra.BoundingBox3D_get_dimension(self)
3666 def get_corner(self, i):
3667 r"""get_corner(BoundingBox3D self, unsigned int i) -> Vector3D"""
3668 return _IMP_algebra.BoundingBox3D_get_corner(self, i)
3670 def get_contains(self, *args):
3672 get_contains(BoundingBox3D self, Vector3D o) -> bool
3673 get_contains(BoundingBox3D self, BoundingBox3D bb) -> bool
3675 return _IMP_algebra.BoundingBox3D_get_contains(self, *args)
3677 def show(self, *args):
3678 r"""show(BoundingBox3D self, _ostream out=std::cout)"""
3679 return _IMP_algebra.BoundingBox3D_show(self, *args)
3682 r"""__str__(BoundingBox3D self) -> std::string"""
3683 return _IMP_algebra.BoundingBox3D___str__(self)
3686 r"""__repr__(BoundingBox3D self) -> std::string"""
3687 return _IMP_algebra.BoundingBox3D___repr__(self)
3689 def __cmp__(self, arg2):
3690 r"""__cmp__(BoundingBox3D self, BoundingBox3D arg2) -> int"""
3691 return _IMP_algebra.BoundingBox3D___cmp__(self, arg2)
3693 def __eq__(self, arg2):
3694 r"""__eq__(BoundingBox3D self, BoundingBox3D arg2) -> bool"""
3695 return _IMP_algebra.BoundingBox3D___eq__(self, arg2)
3697 def __init__(self, *args):
3699 __init__(BoundingBox3D self, unsigned int d) -> BoundingBox3D
3700 __init__(BoundingBox3D self, Vector3D lb, Vector3D ub) -> BoundingBox3D
3701 __init__(BoundingBox3D self, Vector3D v) -> BoundingBox3D
3702 __init__(BoundingBox3D self, IMP::Vector< IMP::algebra::VectorD< 3 > > const & points) -> BoundingBox3D
3703 __init__(BoundingBox3D self) -> BoundingBox3D
3705 _IMP_algebra.BoundingBox3D_swiginit(self, _IMP_algebra.new_BoundingBox3D(*args))
3707 def __getitem__(self, index):
3708 r"""__getitem__(BoundingBox3D self, unsigned int index) -> Vector3D"""
3709 return _IMP_algebra.BoundingBox3D___getitem__(self, index)
3711 def __iadd__(self, *args):
3712 _IMP_algebra.BoundingBox3D___iadd__(self, *args)
3718 r"""__len__(BoundingBox3D self) -> unsigned int"""
3719 return _IMP_algebra.BoundingBox3D___len__(self)
3721 def __add__(self, *args):
3723 __add__(BoundingBox3D self, BoundingBox3D o) -> BoundingBox3D
3724 __add__(BoundingBox3D self, Vector3D o) -> BoundingBox3D
3725 __add__(BoundingBox3D self, double o) -> BoundingBox3D
3727 return _IMP_algebra.BoundingBox3D___add__(self, *args)
3729 def _get_as_binary(self):
3730 r"""_get_as_binary(BoundingBox3D self) -> PyObject *"""
3731 return _IMP_algebra.BoundingBox3D__get_as_binary(self)
3733 def _set_from_binary(self, p):
3734 r"""_set_from_binary(BoundingBox3D self, PyObject * p)"""
3735 return _IMP_algebra.BoundingBox3D__set_from_binary(self, p)
3737 def __getstate__(self):
3738 p = self._get_as_binary()
3739 if len(self.__dict__) > 1:
3740 d = self.__dict__.copy()
3745 def __setstate__(self, p):
3746 if not hasattr(self,
'this'):
3748 if isinstance(p, tuple):
3750 self.__dict__.update(d)
3751 return self._set_from_binary(p)
3753 __swig_destroy__ = _IMP_algebra.delete_BoundingBox3D
3756 _IMP_algebra.BoundingBox3D_swigregister(BoundingBox3D)
3758 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 4 > class."""
3760 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3762 def get_dimension(self):
3763 r"""get_dimension(BoundingBox4D self) -> unsigned int"""
3764 return _IMP_algebra.BoundingBox4D_get_dimension(self)
3766 def get_corner(self, i):
3767 r"""get_corner(BoundingBox4D self, unsigned int i) -> Vector4D"""
3768 return _IMP_algebra.BoundingBox4D_get_corner(self, i)
3770 def get_contains(self, *args):
3772 get_contains(BoundingBox4D self, Vector4D o) -> bool
3773 get_contains(BoundingBox4D self, BoundingBox4D bb) -> bool
3775 return _IMP_algebra.BoundingBox4D_get_contains(self, *args)
3777 def show(self, *args):
3778 r"""show(BoundingBox4D self, _ostream out=std::cout)"""
3779 return _IMP_algebra.BoundingBox4D_show(self, *args)
3782 r"""__str__(BoundingBox4D self) -> std::string"""
3783 return _IMP_algebra.BoundingBox4D___str__(self)
3786 r"""__repr__(BoundingBox4D self) -> std::string"""
3787 return _IMP_algebra.BoundingBox4D___repr__(self)
3789 def __cmp__(self, arg2):
3790 r"""__cmp__(BoundingBox4D self, BoundingBox4D arg2) -> int"""
3791 return _IMP_algebra.BoundingBox4D___cmp__(self, arg2)
3793 def __eq__(self, arg2):
3794 r"""__eq__(BoundingBox4D self, BoundingBox4D arg2) -> bool"""
3795 return _IMP_algebra.BoundingBox4D___eq__(self, arg2)
3797 def __init__(self, *args):
3799 __init__(BoundingBox4D self, unsigned int d) -> BoundingBox4D
3800 __init__(BoundingBox4D self, Vector4D lb, Vector4D ub) -> BoundingBox4D
3801 __init__(BoundingBox4D self, Vector4D v) -> BoundingBox4D
3802 __init__(BoundingBox4D self, IMP::Vector< IMP::algebra::VectorD< 4 > > const & points) -> BoundingBox4D
3803 __init__(BoundingBox4D self) -> BoundingBox4D
3805 _IMP_algebra.BoundingBox4D_swiginit(self, _IMP_algebra.new_BoundingBox4D(*args))
3807 def __getitem__(self, index):
3808 r"""__getitem__(BoundingBox4D self, unsigned int index) -> Vector4D"""
3809 return _IMP_algebra.BoundingBox4D___getitem__(self, index)
3811 def __iadd__(self, *args):
3812 _IMP_algebra.BoundingBox4D___iadd__(self, *args)
3818 r"""__len__(BoundingBox4D self) -> unsigned int"""
3819 return _IMP_algebra.BoundingBox4D___len__(self)
3821 def __add__(self, *args):
3823 __add__(BoundingBox4D self, BoundingBox4D o) -> BoundingBox4D
3824 __add__(BoundingBox4D self, Vector4D o) -> BoundingBox4D
3825 __add__(BoundingBox4D self, double o) -> BoundingBox4D
3827 return _IMP_algebra.BoundingBox4D___add__(self, *args)
3829 def _get_as_binary(self):
3830 r"""_get_as_binary(BoundingBox4D self) -> PyObject *"""
3831 return _IMP_algebra.BoundingBox4D__get_as_binary(self)
3833 def _set_from_binary(self, p):
3834 r"""_set_from_binary(BoundingBox4D self, PyObject * p)"""
3835 return _IMP_algebra.BoundingBox4D__set_from_binary(self, p)
3837 def __getstate__(self):
3838 p = self._get_as_binary()
3839 if len(self.__dict__) > 1:
3840 d = self.__dict__.copy()
3845 def __setstate__(self, p):
3846 if not hasattr(self,
'this'):
3848 if isinstance(p, tuple):
3850 self.__dict__.update(d)
3851 return self._set_from_binary(p)
3853 __swig_destroy__ = _IMP_algebra.delete_BoundingBox4D
3856 _IMP_algebra.BoundingBox4D_swigregister(BoundingBox4D)
3858 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 5 > class."""
3860 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3862 def get_dimension(self):
3863 r"""get_dimension(BoundingBox5D self) -> unsigned int"""
3864 return _IMP_algebra.BoundingBox5D_get_dimension(self)
3866 def get_corner(self, i):
3867 r"""get_corner(BoundingBox5D self, unsigned int i) -> Vector5D"""
3868 return _IMP_algebra.BoundingBox5D_get_corner(self, i)
3870 def get_contains(self, *args):
3872 get_contains(BoundingBox5D self, Vector5D o) -> bool
3873 get_contains(BoundingBox5D self, BoundingBox5D bb) -> bool
3875 return _IMP_algebra.BoundingBox5D_get_contains(self, *args)
3877 def show(self, *args):
3878 r"""show(BoundingBox5D self, _ostream out=std::cout)"""
3879 return _IMP_algebra.BoundingBox5D_show(self, *args)
3882 r"""__str__(BoundingBox5D self) -> std::string"""
3883 return _IMP_algebra.BoundingBox5D___str__(self)
3886 r"""__repr__(BoundingBox5D self) -> std::string"""
3887 return _IMP_algebra.BoundingBox5D___repr__(self)
3889 def __cmp__(self, arg2):
3890 r"""__cmp__(BoundingBox5D self, BoundingBox5D arg2) -> int"""
3891 return _IMP_algebra.BoundingBox5D___cmp__(self, arg2)
3893 def __eq__(self, arg2):
3894 r"""__eq__(BoundingBox5D self, BoundingBox5D arg2) -> bool"""
3895 return _IMP_algebra.BoundingBox5D___eq__(self, arg2)
3897 def __init__(self, *args):
3899 __init__(BoundingBox5D self, unsigned int d) -> BoundingBox5D
3900 __init__(BoundingBox5D self, Vector5D lb, Vector5D ub) -> BoundingBox5D
3901 __init__(BoundingBox5D self, Vector5D v) -> BoundingBox5D
3902 __init__(BoundingBox5D self, IMP::Vector< IMP::algebra::VectorD< 5 > > const & points) -> BoundingBox5D
3903 __init__(BoundingBox5D self) -> BoundingBox5D
3905 _IMP_algebra.BoundingBox5D_swiginit(self, _IMP_algebra.new_BoundingBox5D(*args))
3907 def __getitem__(self, index):
3908 r"""__getitem__(BoundingBox5D self, unsigned int index) -> Vector5D"""
3909 return _IMP_algebra.BoundingBox5D___getitem__(self, index)
3911 def __iadd__(self, *args):
3912 _IMP_algebra.BoundingBox5D___iadd__(self, *args)
3918 r"""__len__(BoundingBox5D self) -> unsigned int"""
3919 return _IMP_algebra.BoundingBox5D___len__(self)
3921 def __add__(self, *args):
3923 __add__(BoundingBox5D self, BoundingBox5D o) -> BoundingBox5D
3924 __add__(BoundingBox5D self, Vector5D o) -> BoundingBox5D
3925 __add__(BoundingBox5D self, double o) -> BoundingBox5D
3927 return _IMP_algebra.BoundingBox5D___add__(self, *args)
3929 def _get_as_binary(self):
3930 r"""_get_as_binary(BoundingBox5D self) -> PyObject *"""
3931 return _IMP_algebra.BoundingBox5D__get_as_binary(self)
3933 def _set_from_binary(self, p):
3934 r"""_set_from_binary(BoundingBox5D self, PyObject * p)"""
3935 return _IMP_algebra.BoundingBox5D__set_from_binary(self, p)
3937 def __getstate__(self):
3938 p = self._get_as_binary()
3939 if len(self.__dict__) > 1:
3940 d = self.__dict__.copy()
3945 def __setstate__(self, p):
3946 if not hasattr(self,
'this'):
3948 if isinstance(p, tuple):
3950 self.__dict__.update(d)
3951 return self._set_from_binary(p)
3953 __swig_destroy__ = _IMP_algebra.delete_BoundingBox5D
3956 _IMP_algebra.BoundingBox5D_swigregister(BoundingBox5D)
3958 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 6 > class."""
3960 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3962 def get_dimension(self):
3963 r"""get_dimension(BoundingBox6D self) -> unsigned int"""
3964 return _IMP_algebra.BoundingBox6D_get_dimension(self)
3966 def get_corner(self, i):
3967 r"""get_corner(BoundingBox6D self, unsigned int i) -> Vector6D"""
3968 return _IMP_algebra.BoundingBox6D_get_corner(self, i)
3970 def get_contains(self, *args):
3972 get_contains(BoundingBox6D self, Vector6D o) -> bool
3973 get_contains(BoundingBox6D self, BoundingBox6D bb) -> bool
3975 return _IMP_algebra.BoundingBox6D_get_contains(self, *args)
3977 def show(self, *args):
3978 r"""show(BoundingBox6D self, _ostream out=std::cout)"""
3979 return _IMP_algebra.BoundingBox6D_show(self, *args)
3982 r"""__str__(BoundingBox6D self) -> std::string"""
3983 return _IMP_algebra.BoundingBox6D___str__(self)
3986 r"""__repr__(BoundingBox6D self) -> std::string"""
3987 return _IMP_algebra.BoundingBox6D___repr__(self)
3989 def __cmp__(self, arg2):
3990 r"""__cmp__(BoundingBox6D self, BoundingBox6D arg2) -> int"""
3991 return _IMP_algebra.BoundingBox6D___cmp__(self, arg2)
3993 def __eq__(self, arg2):
3994 r"""__eq__(BoundingBox6D self, BoundingBox6D arg2) -> bool"""
3995 return _IMP_algebra.BoundingBox6D___eq__(self, arg2)
3997 def __init__(self, *args):
3999 __init__(BoundingBox6D self, unsigned int d) -> BoundingBox6D
4000 __init__(BoundingBox6D self, Vector6D lb, Vector6D ub) -> BoundingBox6D
4001 __init__(BoundingBox6D self, Vector6D v) -> BoundingBox6D
4002 __init__(BoundingBox6D self, IMP::Vector< IMP::algebra::VectorD< 6 > > const & points) -> BoundingBox6D
4003 __init__(BoundingBox6D self) -> BoundingBox6D
4005 _IMP_algebra.BoundingBox6D_swiginit(self, _IMP_algebra.new_BoundingBox6D(*args))
4007 def __getitem__(self, index):
4008 r"""__getitem__(BoundingBox6D self, unsigned int index) -> Vector6D"""
4009 return _IMP_algebra.BoundingBox6D___getitem__(self, index)
4011 def __iadd__(self, *args):
4012 _IMP_algebra.BoundingBox6D___iadd__(self, *args)
4018 r"""__len__(BoundingBox6D self) -> unsigned int"""
4019 return _IMP_algebra.BoundingBox6D___len__(self)
4021 def __add__(self, *args):
4023 __add__(BoundingBox6D self, BoundingBox6D o) -> BoundingBox6D
4024 __add__(BoundingBox6D self, Vector6D o) -> BoundingBox6D
4025 __add__(BoundingBox6D self, double o) -> BoundingBox6D
4027 return _IMP_algebra.BoundingBox6D___add__(self, *args)
4029 def _get_as_binary(self):
4030 r"""_get_as_binary(BoundingBox6D self) -> PyObject *"""
4031 return _IMP_algebra.BoundingBox6D__get_as_binary(self)
4033 def _set_from_binary(self, p):
4034 r"""_set_from_binary(BoundingBox6D self, PyObject * p)"""
4035 return _IMP_algebra.BoundingBox6D__set_from_binary(self, p)
4037 def __getstate__(self):
4038 p = self._get_as_binary()
4039 if len(self.__dict__) > 1:
4040 d = self.__dict__.copy()
4045 def __setstate__(self, p):
4046 if not hasattr(self,
'this'):
4048 if isinstance(p, tuple):
4050 self.__dict__.update(d)
4051 return self._set_from_binary(p)
4053 __swig_destroy__ = _IMP_algebra.delete_BoundingBox6D
4056 _IMP_algebra.BoundingBox6D_swigregister(BoundingBox6D)
4058 r"""Proxy of C++ IMP::algebra::BoundingBoxD< -1 > class."""
4060 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4062 def get_dimension(self):
4063 r"""get_dimension(BoundingBoxKD self) -> unsigned int"""
4064 return _IMP_algebra.BoundingBoxKD_get_dimension(self)
4066 def get_corner(self, i):
4067 r"""get_corner(BoundingBoxKD self, unsigned int i) -> VectorKD"""
4068 return _IMP_algebra.BoundingBoxKD_get_corner(self, i)
4070 def get_contains(self, *args):
4072 get_contains(BoundingBoxKD self, VectorKD o) -> bool
4073 get_contains(BoundingBoxKD self, BoundingBoxKD bb) -> bool
4075 return _IMP_algebra.BoundingBoxKD_get_contains(self, *args)
4077 def show(self, *args):
4078 r"""show(BoundingBoxKD self, _ostream out=std::cout)"""
4079 return _IMP_algebra.BoundingBoxKD_show(self, *args)
4082 r"""__str__(BoundingBoxKD self) -> std::string"""
4083 return _IMP_algebra.BoundingBoxKD___str__(self)
4086 r"""__repr__(BoundingBoxKD self) -> std::string"""
4087 return _IMP_algebra.BoundingBoxKD___repr__(self)
4089 def __cmp__(self, arg2):
4090 r"""__cmp__(BoundingBoxKD self, BoundingBoxKD arg2) -> int"""
4091 return _IMP_algebra.BoundingBoxKD___cmp__(self, arg2)
4093 def __eq__(self, arg2):
4094 r"""__eq__(BoundingBoxKD self, BoundingBoxKD arg2) -> bool"""
4095 return _IMP_algebra.BoundingBoxKD___eq__(self, arg2)
4097 def __init__(self, *args):
4099 __init__(BoundingBoxKD self, unsigned int d) -> BoundingBoxKD
4100 __init__(BoundingBoxKD self, VectorKD lb, VectorKD ub) -> BoundingBoxKD
4101 __init__(BoundingBoxKD self, VectorKD v) -> BoundingBoxKD
4102 __init__(BoundingBoxKD self, IMP::Vector< IMP::algebra::VectorD< -1 > > const & points) -> BoundingBoxKD
4103 __init__(BoundingBoxKD self) -> BoundingBoxKD
4105 _IMP_algebra.BoundingBoxKD_swiginit(self, _IMP_algebra.new_BoundingBoxKD(*args))
4107 def __getitem__(self, index):
4108 r"""__getitem__(BoundingBoxKD self, unsigned int index) -> VectorKD"""
4109 return _IMP_algebra.BoundingBoxKD___getitem__(self, index)
4111 def __iadd__(self, *args):
4112 _IMP_algebra.BoundingBoxKD___iadd__(self, *args)
4118 r"""__len__(BoundingBoxKD self) -> unsigned int"""
4119 return _IMP_algebra.BoundingBoxKD___len__(self)
4121 def __add__(self, *args):
4123 __add__(BoundingBoxKD self, BoundingBoxKD o) -> BoundingBoxKD
4124 __add__(BoundingBoxKD self, VectorKD o) -> BoundingBoxKD
4125 __add__(BoundingBoxKD self, double o) -> BoundingBoxKD
4127 return _IMP_algebra.BoundingBoxKD___add__(self, *args)
4129 def _get_as_binary(self):
4130 r"""_get_as_binary(BoundingBoxKD self) -> PyObject *"""
4131 return _IMP_algebra.BoundingBoxKD__get_as_binary(self)
4133 def _set_from_binary(self, p):
4134 r"""_set_from_binary(BoundingBoxKD self, PyObject * p)"""
4135 return _IMP_algebra.BoundingBoxKD__set_from_binary(self, p)
4137 def __getstate__(self):
4138 p = self._get_as_binary()
4139 if len(self.__dict__) > 1:
4140 d = self.__dict__.copy()
4145 def __setstate__(self, p):
4146 if not hasattr(self,
'this'):
4148 if isinstance(p, tuple):
4150 self.__dict__.update(d)
4151 return self._set_from_binary(p)
4153 __swig_destroy__ = _IMP_algebra.delete_BoundingBoxKD
4156 _IMP_algebra.BoundingBoxKD_swigregister(BoundingBoxKD)
4157 class Sphere1D(_GeometricPrimitive1D):
4158 r"""Proxy of C++ IMP::algebra::SphereD< 1 > class."""
4160 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4162 def __init__(self, *args):
4164 __init__(Sphere1D self) -> Sphere1D
4165 __init__(Sphere1D self, Vector1D center, double radius) -> Sphere1D
4167 _IMP_algebra.Sphere1D_swiginit(self, _IMP_algebra.new_Sphere1D(*args))
4169 def get_radius(self):
4170 r"""get_radius(Sphere1D self) -> double"""
4171 return _IMP_algebra.Sphere1D_get_radius(self)
4173 def get_center(self):
4174 r"""get_center(Sphere1D self) -> Vector1D"""
4175 return _IMP_algebra.Sphere1D_get_center(self)
4177 def get_contains(self, *args):
4179 get_contains(Sphere1D self, Sphere1D o) -> bool
4180 get_contains(Sphere1D self, Vector1D p) -> bool
4182 return _IMP_algebra.Sphere1D_get_contains(self, *args)
4184 def show(self, *args):
4185 r"""show(Sphere1D self, _ostream out=std::cout)"""
4186 return _IMP_algebra.Sphere1D_show(self, *args)
4188 def get_dimension(self):
4189 r"""get_dimension(Sphere1D self) -> unsigned int"""
4190 return _IMP_algebra.Sphere1D_get_dimension(self)
4193 r"""__str__(Sphere1D self) -> std::string"""
4194 return _IMP_algebra.Sphere1D___str__(self)
4197 r"""__repr__(Sphere1D self) -> std::string"""
4198 return _IMP_algebra.Sphere1D___repr__(self)
4200 def __cmp__(self, arg2):
4201 r"""__cmp__(Sphere1D self, Sphere1D arg2) -> int"""
4202 return _IMP_algebra.Sphere1D___cmp__(self, arg2)
4204 def __eq__(self, arg2):
4205 r"""__eq__(Sphere1D self, Sphere1D arg2) -> bool"""
4206 return _IMP_algebra.Sphere1D___eq__(self, arg2)
4208 def _get_as_binary(self):
4209 r"""_get_as_binary(Sphere1D self) -> PyObject *"""
4210 return _IMP_algebra.Sphere1D__get_as_binary(self)
4212 def _set_from_binary(self, p):
4213 r"""_set_from_binary(Sphere1D self, PyObject * p)"""
4214 return _IMP_algebra.Sphere1D__set_from_binary(self, p)
4216 def __getstate__(self):
4217 p = self._get_as_binary()
4218 if len(self.__dict__) > 1:
4219 d = self.__dict__.copy()
4224 def __setstate__(self, p):
4225 if not hasattr(self,
'this'):
4227 if isinstance(p, tuple):
4229 self.__dict__.update(d)
4230 return self._set_from_binary(p)
4232 __swig_destroy__ = _IMP_algebra.delete_Sphere1D
4235 _IMP_algebra.Sphere1D_swigregister(Sphere1D)
4236 class Sphere2D(_GeometricPrimitive2D):
4237 r"""Proxy of C++ IMP::algebra::SphereD< 2 > class."""
4239 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4241 def __init__(self, *args):
4243 __init__(Sphere2D self) -> Sphere2D
4244 __init__(Sphere2D self, Vector2D center, double radius) -> Sphere2D
4246 _IMP_algebra.Sphere2D_swiginit(self, _IMP_algebra.new_Sphere2D(*args))
4248 def get_radius(self):
4249 r"""get_radius(Sphere2D self) -> double"""
4250 return _IMP_algebra.Sphere2D_get_radius(self)
4252 def get_center(self):
4253 r"""get_center(Sphere2D self) -> Vector2D"""
4254 return _IMP_algebra.Sphere2D_get_center(self)
4256 def get_contains(self, *args):
4258 get_contains(Sphere2D self, Sphere2D o) -> bool
4259 get_contains(Sphere2D self, Vector2D p) -> bool
4261 return _IMP_algebra.Sphere2D_get_contains(self, *args)
4263 def show(self, *args):
4264 r"""show(Sphere2D self, _ostream out=std::cout)"""
4265 return _IMP_algebra.Sphere2D_show(self, *args)
4267 def get_dimension(self):
4268 r"""get_dimension(Sphere2D self) -> unsigned int"""
4269 return _IMP_algebra.Sphere2D_get_dimension(self)
4272 r"""__str__(Sphere2D self) -> std::string"""
4273 return _IMP_algebra.Sphere2D___str__(self)
4276 r"""__repr__(Sphere2D self) -> std::string"""
4277 return _IMP_algebra.Sphere2D___repr__(self)
4279 def __cmp__(self, arg2):
4280 r"""__cmp__(Sphere2D self, Sphere2D arg2) -> int"""
4281 return _IMP_algebra.Sphere2D___cmp__(self, arg2)
4283 def __eq__(self, arg2):
4284 r"""__eq__(Sphere2D self, Sphere2D arg2) -> bool"""
4285 return _IMP_algebra.Sphere2D___eq__(self, arg2)
4287 def _get_as_binary(self):
4288 r"""_get_as_binary(Sphere2D self) -> PyObject *"""
4289 return _IMP_algebra.Sphere2D__get_as_binary(self)
4291 def _set_from_binary(self, p):
4292 r"""_set_from_binary(Sphere2D self, PyObject * p)"""
4293 return _IMP_algebra.Sphere2D__set_from_binary(self, p)
4295 def __getstate__(self):
4296 p = self._get_as_binary()
4297 if len(self.__dict__) > 1:
4298 d = self.__dict__.copy()
4303 def __setstate__(self, p):
4304 if not hasattr(self,
'this'):
4306 if isinstance(p, tuple):
4308 self.__dict__.update(d)
4309 return self._set_from_binary(p)
4311 __swig_destroy__ = _IMP_algebra.delete_Sphere2D
4314 _IMP_algebra.Sphere2D_swigregister(Sphere2D)
4315 class Sphere3D(_GeometricPrimitive3D):
4316 r"""Proxy of C++ IMP::algebra::SphereD< 3 > class."""
4318 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4320 def __init__(self, *args):
4322 __init__(Sphere3D self) -> Sphere3D
4323 __init__(Sphere3D self, Vector3D center, double radius) -> Sphere3D
4325 _IMP_algebra.Sphere3D_swiginit(self, _IMP_algebra.new_Sphere3D(*args))
4327 def get_radius(self):
4328 r"""get_radius(Sphere3D self) -> double"""
4329 return _IMP_algebra.Sphere3D_get_radius(self)
4331 def get_center(self):
4332 r"""get_center(Sphere3D self) -> Vector3D"""
4333 return _IMP_algebra.Sphere3D_get_center(self)
4335 def get_contains(self, *args):
4337 get_contains(Sphere3D self, Sphere3D o) -> bool
4338 get_contains(Sphere3D self, Vector3D p) -> bool
4340 return _IMP_algebra.Sphere3D_get_contains(self, *args)
4342 def show(self, *args):
4343 r"""show(Sphere3D self, _ostream out=std::cout)"""
4344 return _IMP_algebra.Sphere3D_show(self, *args)
4346 def get_dimension(self):
4347 r"""get_dimension(Sphere3D self) -> unsigned int"""
4348 return _IMP_algebra.Sphere3D_get_dimension(self)
4351 r"""__str__(Sphere3D self) -> std::string"""
4352 return _IMP_algebra.Sphere3D___str__(self)
4355 r"""__repr__(Sphere3D self) -> std::string"""
4356 return _IMP_algebra.Sphere3D___repr__(self)
4358 def __cmp__(self, arg2):
4359 r"""__cmp__(Sphere3D self, Sphere3D arg2) -> int"""
4360 return _IMP_algebra.Sphere3D___cmp__(self, arg2)
4362 def __eq__(self, arg2):
4363 r"""__eq__(Sphere3D self, Sphere3D arg2) -> bool"""
4364 return _IMP_algebra.Sphere3D___eq__(self, arg2)
4366 def _get_as_binary(self):
4367 r"""_get_as_binary(Sphere3D self) -> PyObject *"""
4368 return _IMP_algebra.Sphere3D__get_as_binary(self)
4370 def _set_from_binary(self, p):
4371 r"""_set_from_binary(Sphere3D self, PyObject * p)"""
4372 return _IMP_algebra.Sphere3D__set_from_binary(self, p)
4374 def __getstate__(self):
4375 p = self._get_as_binary()
4376 if len(self.__dict__) > 1:
4377 d = self.__dict__.copy()
4382 def __setstate__(self, p):
4383 if not hasattr(self,
'this'):
4385 if isinstance(p, tuple):
4387 self.__dict__.update(d)
4388 return self._set_from_binary(p)
4390 __swig_destroy__ = _IMP_algebra.delete_Sphere3D
4393 _IMP_algebra.Sphere3D_swigregister(Sphere3D)
4394 class Sphere4D(_GeometricPrimitive4D):
4395 r"""Proxy of C++ IMP::algebra::SphereD< 4 > class."""
4397 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4399 def __init__(self, *args):
4401 __init__(Sphere4D self) -> Sphere4D
4402 __init__(Sphere4D self, Vector4D center, double radius) -> Sphere4D
4404 _IMP_algebra.Sphere4D_swiginit(self, _IMP_algebra.new_Sphere4D(*args))
4406 def get_radius(self):
4407 r"""get_radius(Sphere4D self) -> double"""
4408 return _IMP_algebra.Sphere4D_get_radius(self)
4410 def get_center(self):
4411 r"""get_center(Sphere4D self) -> Vector4D"""
4412 return _IMP_algebra.Sphere4D_get_center(self)
4414 def get_contains(self, *args):
4416 get_contains(Sphere4D self, Sphere4D o) -> bool
4417 get_contains(Sphere4D self, Vector4D p) -> bool
4419 return _IMP_algebra.Sphere4D_get_contains(self, *args)
4421 def show(self, *args):
4422 r"""show(Sphere4D self, _ostream out=std::cout)"""
4423 return _IMP_algebra.Sphere4D_show(self, *args)
4425 def get_dimension(self):
4426 r"""get_dimension(Sphere4D self) -> unsigned int"""
4427 return _IMP_algebra.Sphere4D_get_dimension(self)
4430 r"""__str__(Sphere4D self) -> std::string"""
4431 return _IMP_algebra.Sphere4D___str__(self)
4434 r"""__repr__(Sphere4D self) -> std::string"""
4435 return _IMP_algebra.Sphere4D___repr__(self)
4437 def __cmp__(self, arg2):
4438 r"""__cmp__(Sphere4D self, Sphere4D arg2) -> int"""
4439 return _IMP_algebra.Sphere4D___cmp__(self, arg2)
4441 def __eq__(self, arg2):
4442 r"""__eq__(Sphere4D self, Sphere4D arg2) -> bool"""
4443 return _IMP_algebra.Sphere4D___eq__(self, arg2)
4445 def _get_as_binary(self):
4446 r"""_get_as_binary(Sphere4D self) -> PyObject *"""
4447 return _IMP_algebra.Sphere4D__get_as_binary(self)
4449 def _set_from_binary(self, p):
4450 r"""_set_from_binary(Sphere4D self, PyObject * p)"""
4451 return _IMP_algebra.Sphere4D__set_from_binary(self, p)
4453 def __getstate__(self):
4454 p = self._get_as_binary()
4455 if len(self.__dict__) > 1:
4456 d = self.__dict__.copy()
4461 def __setstate__(self, p):
4462 if not hasattr(self,
'this'):
4464 if isinstance(p, tuple):
4466 self.__dict__.update(d)
4467 return self._set_from_binary(p)
4469 __swig_destroy__ = _IMP_algebra.delete_Sphere4D
4472 _IMP_algebra.Sphere4D_swigregister(Sphere4D)
4473 class Sphere5D(_GeometricPrimitive5D):
4474 r"""Proxy of C++ IMP::algebra::SphereD< 5 > class."""
4476 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4478 def __init__(self, *args):
4480 __init__(Sphere5D self) -> Sphere5D
4481 __init__(Sphere5D self, Vector5D center, double radius) -> Sphere5D
4483 _IMP_algebra.Sphere5D_swiginit(self, _IMP_algebra.new_Sphere5D(*args))
4485 def get_radius(self):
4486 r"""get_radius(Sphere5D self) -> double"""
4487 return _IMP_algebra.Sphere5D_get_radius(self)
4489 def get_center(self):
4490 r"""get_center(Sphere5D self) -> Vector5D"""
4491 return _IMP_algebra.Sphere5D_get_center(self)
4493 def get_contains(self, *args):
4495 get_contains(Sphere5D self, Sphere5D o) -> bool
4496 get_contains(Sphere5D self, Vector5D p) -> bool
4498 return _IMP_algebra.Sphere5D_get_contains(self, *args)
4500 def show(self, *args):
4501 r"""show(Sphere5D self, _ostream out=std::cout)"""
4502 return _IMP_algebra.Sphere5D_show(self, *args)
4504 def get_dimension(self):
4505 r"""get_dimension(Sphere5D self) -> unsigned int"""
4506 return _IMP_algebra.Sphere5D_get_dimension(self)
4509 r"""__str__(Sphere5D self) -> std::string"""
4510 return _IMP_algebra.Sphere5D___str__(self)
4513 r"""__repr__(Sphere5D self) -> std::string"""
4514 return _IMP_algebra.Sphere5D___repr__(self)
4516 def __cmp__(self, arg2):
4517 r"""__cmp__(Sphere5D self, Sphere5D arg2) -> int"""
4518 return _IMP_algebra.Sphere5D___cmp__(self, arg2)
4520 def __eq__(self, arg2):
4521 r"""__eq__(Sphere5D self, Sphere5D arg2) -> bool"""
4522 return _IMP_algebra.Sphere5D___eq__(self, arg2)
4524 def _get_as_binary(self):
4525 r"""_get_as_binary(Sphere5D self) -> PyObject *"""
4526 return _IMP_algebra.Sphere5D__get_as_binary(self)
4528 def _set_from_binary(self, p):
4529 r"""_set_from_binary(Sphere5D self, PyObject * p)"""
4530 return _IMP_algebra.Sphere5D__set_from_binary(self, p)
4532 def __getstate__(self):
4533 p = self._get_as_binary()
4534 if len(self.__dict__) > 1:
4535 d = self.__dict__.copy()
4540 def __setstate__(self, p):
4541 if not hasattr(self,
'this'):
4543 if isinstance(p, tuple):
4545 self.__dict__.update(d)
4546 return self._set_from_binary(p)
4548 __swig_destroy__ = _IMP_algebra.delete_Sphere5D
4551 _IMP_algebra.Sphere5D_swigregister(Sphere5D)
4552 class Sphere6D(_GeometricPrimitive6D):
4553 r"""Proxy of C++ IMP::algebra::SphereD< 6 > class."""
4555 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4557 def __init__(self, *args):
4559 __init__(Sphere6D self) -> Sphere6D
4560 __init__(Sphere6D self, Vector6D center, double radius) -> Sphere6D
4562 _IMP_algebra.Sphere6D_swiginit(self, _IMP_algebra.new_Sphere6D(*args))
4564 def get_radius(self):
4565 r"""get_radius(Sphere6D self) -> double"""
4566 return _IMP_algebra.Sphere6D_get_radius(self)
4568 def get_center(self):
4569 r"""get_center(Sphere6D self) -> Vector6D"""
4570 return _IMP_algebra.Sphere6D_get_center(self)
4572 def get_contains(self, *args):
4574 get_contains(Sphere6D self, Sphere6D o) -> bool
4575 get_contains(Sphere6D self, Vector6D p) -> bool
4577 return _IMP_algebra.Sphere6D_get_contains(self, *args)
4579 def show(self, *args):
4580 r"""show(Sphere6D self, _ostream out=std::cout)"""
4581 return _IMP_algebra.Sphere6D_show(self, *args)
4583 def get_dimension(self):
4584 r"""get_dimension(Sphere6D self) -> unsigned int"""
4585 return _IMP_algebra.Sphere6D_get_dimension(self)
4588 r"""__str__(Sphere6D self) -> std::string"""
4589 return _IMP_algebra.Sphere6D___str__(self)
4592 r"""__repr__(Sphere6D self) -> std::string"""
4593 return _IMP_algebra.Sphere6D___repr__(self)
4595 def __cmp__(self, arg2):
4596 r"""__cmp__(Sphere6D self, Sphere6D arg2) -> int"""
4597 return _IMP_algebra.Sphere6D___cmp__(self, arg2)
4599 def __eq__(self, arg2):
4600 r"""__eq__(Sphere6D self, Sphere6D arg2) -> bool"""
4601 return _IMP_algebra.Sphere6D___eq__(self, arg2)
4603 def _get_as_binary(self):
4604 r"""_get_as_binary(Sphere6D self) -> PyObject *"""
4605 return _IMP_algebra.Sphere6D__get_as_binary(self)
4607 def _set_from_binary(self, p):
4608 r"""_set_from_binary(Sphere6D self, PyObject * p)"""
4609 return _IMP_algebra.Sphere6D__set_from_binary(self, p)
4611 def __getstate__(self):
4612 p = self._get_as_binary()
4613 if len(self.__dict__) > 1:
4614 d = self.__dict__.copy()
4619 def __setstate__(self, p):
4620 if not hasattr(self,
'this'):
4622 if isinstance(p, tuple):
4624 self.__dict__.update(d)
4625 return self._set_from_binary(p)
4627 __swig_destroy__ = _IMP_algebra.delete_Sphere6D
4630 _IMP_algebra.Sphere6D_swigregister(Sphere6D)
4631 class SphereKD(_GeometricPrimitiveKD):
4632 r"""Proxy of C++ IMP::algebra::SphereD< -1 > class."""
4634 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4636 def __init__(self, *args):
4638 __init__(SphereKD self) -> SphereKD
4639 __init__(SphereKD self, VectorKD center, double radius) -> SphereKD
4641 _IMP_algebra.SphereKD_swiginit(self, _IMP_algebra.new_SphereKD(*args))
4643 def get_radius(self):
4644 r"""get_radius(SphereKD self) -> double"""
4645 return _IMP_algebra.SphereKD_get_radius(self)
4647 def get_center(self):
4648 r"""get_center(SphereKD self) -> VectorKD"""
4649 return _IMP_algebra.SphereKD_get_center(self)
4651 def get_contains(self, *args):
4653 get_contains(SphereKD self, SphereKD o) -> bool
4654 get_contains(SphereKD self, VectorKD p) -> bool
4656 return _IMP_algebra.SphereKD_get_contains(self, *args)
4658 def show(self, *args):
4659 r"""show(SphereKD self, _ostream out=std::cout)"""
4660 return _IMP_algebra.SphereKD_show(self, *args)
4662 def get_dimension(self):
4663 r"""get_dimension(SphereKD self) -> unsigned int"""
4664 return _IMP_algebra.SphereKD_get_dimension(self)
4667 r"""__str__(SphereKD self) -> std::string"""
4668 return _IMP_algebra.SphereKD___str__(self)
4671 r"""__repr__(SphereKD self) -> std::string"""
4672 return _IMP_algebra.SphereKD___repr__(self)
4674 def __cmp__(self, arg2):
4675 r"""__cmp__(SphereKD self, SphereKD arg2) -> int"""
4676 return _IMP_algebra.SphereKD___cmp__(self, arg2)
4678 def __eq__(self, arg2):
4679 r"""__eq__(SphereKD self, SphereKD arg2) -> bool"""
4680 return _IMP_algebra.SphereKD___eq__(self, arg2)
4682 def _get_as_binary(self):
4683 r"""_get_as_binary(SphereKD self) -> PyObject *"""
4684 return _IMP_algebra.SphereKD__get_as_binary(self)
4686 def _set_from_binary(self, p):
4687 r"""_set_from_binary(SphereKD self, PyObject * p)"""
4688 return _IMP_algebra.SphereKD__set_from_binary(self, p)
4690 def __getstate__(self):
4691 p = self._get_as_binary()
4692 if len(self.__dict__) > 1:
4693 d = self.__dict__.copy()
4698 def __setstate__(self, p):
4699 if not hasattr(self,
'this'):
4701 if isinstance(p, tuple):
4703 self.__dict__.update(d)
4704 return self._set_from_binary(p)
4706 __swig_destroy__ = _IMP_algebra.delete_SphereKD
4709 _IMP_algebra.SphereKD_swigregister(SphereKD)
4710 class UnitSimplex1D(_UnitSimplexBase1D):
4711 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 1 > class."""
4713 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4716 r"""__init__(UnitSimplex1D self) -> UnitSimplex1D"""
4717 _IMP_algebra.UnitSimplex1D_swiginit(self, _IMP_algebra.new_UnitSimplex1D())
4719 def show(self, *args):
4720 r"""show(UnitSimplex1D self, _ostream out=std::cout)"""
4721 return _IMP_algebra.UnitSimplex1D_show(self, *args)
4724 r"""__str__(UnitSimplex1D self) -> std::string"""
4725 return _IMP_algebra.UnitSimplex1D___str__(self)
4728 r"""__repr__(UnitSimplex1D self) -> std::string"""
4729 return _IMP_algebra.UnitSimplex1D___repr__(self)
4731 def __cmp__(self, arg2):
4732 r"""__cmp__(UnitSimplex1D self, UnitSimplex1D arg2) -> int"""
4733 return _IMP_algebra.UnitSimplex1D___cmp__(self, arg2)
4735 def __eq__(self, arg2):
4736 r"""__eq__(UnitSimplex1D self, UnitSimplex1D arg2) -> bool"""
4737 return _IMP_algebra.UnitSimplex1D___eq__(self, arg2)
4739 def _get_as_binary(self):
4740 r"""_get_as_binary(UnitSimplex1D self) -> PyObject *"""
4741 return _IMP_algebra.UnitSimplex1D__get_as_binary(self)
4743 def _set_from_binary(self, p):
4744 r"""_set_from_binary(UnitSimplex1D self, PyObject * p)"""
4745 return _IMP_algebra.UnitSimplex1D__set_from_binary(self, p)
4747 def __getstate__(self):
4748 p = self._get_as_binary()
4749 if len(self.__dict__) > 1:
4750 d = self.__dict__.copy()
4755 def __setstate__(self, p):
4756 if not hasattr(self,
'this'):
4758 if isinstance(p, tuple):
4760 self.__dict__.update(d)
4761 return self._set_from_binary(p)
4763 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex1D
4766 _IMP_algebra.UnitSimplex1D_swigregister(UnitSimplex1D)
4767 class UnitSimplex2D(_UnitSimplexBase2D):
4768 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 2 > class."""
4770 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4773 r"""__init__(UnitSimplex2D self) -> UnitSimplex2D"""
4774 _IMP_algebra.UnitSimplex2D_swiginit(self, _IMP_algebra.new_UnitSimplex2D())
4776 def show(self, *args):
4777 r"""show(UnitSimplex2D self, _ostream out=std::cout)"""
4778 return _IMP_algebra.UnitSimplex2D_show(self, *args)
4781 r"""__str__(UnitSimplex2D self) -> std::string"""
4782 return _IMP_algebra.UnitSimplex2D___str__(self)
4785 r"""__repr__(UnitSimplex2D self) -> std::string"""
4786 return _IMP_algebra.UnitSimplex2D___repr__(self)
4788 def __cmp__(self, arg2):
4789 r"""__cmp__(UnitSimplex2D self, UnitSimplex2D arg2) -> int"""
4790 return _IMP_algebra.UnitSimplex2D___cmp__(self, arg2)
4792 def __eq__(self, arg2):
4793 r"""__eq__(UnitSimplex2D self, UnitSimplex2D arg2) -> bool"""
4794 return _IMP_algebra.UnitSimplex2D___eq__(self, arg2)
4796 def _get_as_binary(self):
4797 r"""_get_as_binary(UnitSimplex2D self) -> PyObject *"""
4798 return _IMP_algebra.UnitSimplex2D__get_as_binary(self)
4800 def _set_from_binary(self, p):
4801 r"""_set_from_binary(UnitSimplex2D self, PyObject * p)"""
4802 return _IMP_algebra.UnitSimplex2D__set_from_binary(self, p)
4804 def __getstate__(self):
4805 p = self._get_as_binary()
4806 if len(self.__dict__) > 1:
4807 d = self.__dict__.copy()
4812 def __setstate__(self, p):
4813 if not hasattr(self,
'this'):
4815 if isinstance(p, tuple):
4817 self.__dict__.update(d)
4818 return self._set_from_binary(p)
4820 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex2D
4823 _IMP_algebra.UnitSimplex2D_swigregister(UnitSimplex2D)
4824 class UnitSimplex3D(_UnitSimplexBase3D):
4825 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 3 > class."""
4827 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4830 r"""__init__(UnitSimplex3D self) -> UnitSimplex3D"""
4831 _IMP_algebra.UnitSimplex3D_swiginit(self, _IMP_algebra.new_UnitSimplex3D())
4833 def show(self, *args):
4834 r"""show(UnitSimplex3D self, _ostream out=std::cout)"""
4835 return _IMP_algebra.UnitSimplex3D_show(self, *args)
4838 r"""__str__(UnitSimplex3D self) -> std::string"""
4839 return _IMP_algebra.UnitSimplex3D___str__(self)
4842 r"""__repr__(UnitSimplex3D self) -> std::string"""
4843 return _IMP_algebra.UnitSimplex3D___repr__(self)
4845 def __cmp__(self, arg2):
4846 r"""__cmp__(UnitSimplex3D self, UnitSimplex3D arg2) -> int"""
4847 return _IMP_algebra.UnitSimplex3D___cmp__(self, arg2)
4849 def __eq__(self, arg2):
4850 r"""__eq__(UnitSimplex3D self, UnitSimplex3D arg2) -> bool"""
4851 return _IMP_algebra.UnitSimplex3D___eq__(self, arg2)
4853 def _get_as_binary(self):
4854 r"""_get_as_binary(UnitSimplex3D self) -> PyObject *"""
4855 return _IMP_algebra.UnitSimplex3D__get_as_binary(self)
4857 def _set_from_binary(self, p):
4858 r"""_set_from_binary(UnitSimplex3D self, PyObject * p)"""
4859 return _IMP_algebra.UnitSimplex3D__set_from_binary(self, p)
4861 def __getstate__(self):
4862 p = self._get_as_binary()
4863 if len(self.__dict__) > 1:
4864 d = self.__dict__.copy()
4869 def __setstate__(self, p):
4870 if not hasattr(self,
'this'):
4872 if isinstance(p, tuple):
4874 self.__dict__.update(d)
4875 return self._set_from_binary(p)
4877 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex3D
4880 _IMP_algebra.UnitSimplex3D_swigregister(UnitSimplex3D)
4881 class UnitSimplex4D(_UnitSimplexBase4D):
4882 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 4 > class."""
4884 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4887 r"""__init__(UnitSimplex4D self) -> UnitSimplex4D"""
4888 _IMP_algebra.UnitSimplex4D_swiginit(self, _IMP_algebra.new_UnitSimplex4D())
4890 def show(self, *args):
4891 r"""show(UnitSimplex4D self, _ostream out=std::cout)"""
4892 return _IMP_algebra.UnitSimplex4D_show(self, *args)
4895 r"""__str__(UnitSimplex4D self) -> std::string"""
4896 return _IMP_algebra.UnitSimplex4D___str__(self)
4899 r"""__repr__(UnitSimplex4D self) -> std::string"""
4900 return _IMP_algebra.UnitSimplex4D___repr__(self)
4902 def __cmp__(self, arg2):
4903 r"""__cmp__(UnitSimplex4D self, UnitSimplex4D arg2) -> int"""
4904 return _IMP_algebra.UnitSimplex4D___cmp__(self, arg2)
4906 def __eq__(self, arg2):
4907 r"""__eq__(UnitSimplex4D self, UnitSimplex4D arg2) -> bool"""
4908 return _IMP_algebra.UnitSimplex4D___eq__(self, arg2)
4910 def _get_as_binary(self):
4911 r"""_get_as_binary(UnitSimplex4D self) -> PyObject *"""
4912 return _IMP_algebra.UnitSimplex4D__get_as_binary(self)
4914 def _set_from_binary(self, p):
4915 r"""_set_from_binary(UnitSimplex4D self, PyObject * p)"""
4916 return _IMP_algebra.UnitSimplex4D__set_from_binary(self, p)
4918 def __getstate__(self):
4919 p = self._get_as_binary()
4920 if len(self.__dict__) > 1:
4921 d = self.__dict__.copy()
4926 def __setstate__(self, p):
4927 if not hasattr(self,
'this'):
4929 if isinstance(p, tuple):
4931 self.__dict__.update(d)
4932 return self._set_from_binary(p)
4934 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex4D
4937 _IMP_algebra.UnitSimplex4D_swigregister(UnitSimplex4D)
4938 class UnitSimplex5D(_UnitSimplexBase5D):
4939 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 5 > class."""
4941 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4944 r"""__init__(UnitSimplex5D self) -> UnitSimplex5D"""
4945 _IMP_algebra.UnitSimplex5D_swiginit(self, _IMP_algebra.new_UnitSimplex5D())
4947 def show(self, *args):
4948 r"""show(UnitSimplex5D self, _ostream out=std::cout)"""
4949 return _IMP_algebra.UnitSimplex5D_show(self, *args)
4952 r"""__str__(UnitSimplex5D self) -> std::string"""
4953 return _IMP_algebra.UnitSimplex5D___str__(self)
4956 r"""__repr__(UnitSimplex5D self) -> std::string"""
4957 return _IMP_algebra.UnitSimplex5D___repr__(self)
4959 def __cmp__(self, arg2):
4960 r"""__cmp__(UnitSimplex5D self, UnitSimplex5D arg2) -> int"""
4961 return _IMP_algebra.UnitSimplex5D___cmp__(self, arg2)
4963 def __eq__(self, arg2):
4964 r"""__eq__(UnitSimplex5D self, UnitSimplex5D arg2) -> bool"""
4965 return _IMP_algebra.UnitSimplex5D___eq__(self, arg2)
4967 def _get_as_binary(self):
4968 r"""_get_as_binary(UnitSimplex5D self) -> PyObject *"""
4969 return _IMP_algebra.UnitSimplex5D__get_as_binary(self)
4971 def _set_from_binary(self, p):
4972 r"""_set_from_binary(UnitSimplex5D self, PyObject * p)"""
4973 return _IMP_algebra.UnitSimplex5D__set_from_binary(self, p)
4975 def __getstate__(self):
4976 p = self._get_as_binary()
4977 if len(self.__dict__) > 1:
4978 d = self.__dict__.copy()
4983 def __setstate__(self, p):
4984 if not hasattr(self,
'this'):
4986 if isinstance(p, tuple):
4988 self.__dict__.update(d)
4989 return self._set_from_binary(p)
4991 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex5D
4994 _IMP_algebra.UnitSimplex5D_swigregister(UnitSimplex5D)
4995 class UnitSimplex6D(_UnitSimplexBase6D):
4996 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 6 > class."""
4998 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5001 r"""__init__(UnitSimplex6D self) -> UnitSimplex6D"""
5002 _IMP_algebra.UnitSimplex6D_swiginit(self, _IMP_algebra.new_UnitSimplex6D())
5004 def show(self, *args):
5005 r"""show(UnitSimplex6D self, _ostream out=std::cout)"""
5006 return _IMP_algebra.UnitSimplex6D_show(self, *args)
5009 r"""__str__(UnitSimplex6D self) -> std::string"""
5010 return _IMP_algebra.UnitSimplex6D___str__(self)
5013 r"""__repr__(UnitSimplex6D self) -> std::string"""
5014 return _IMP_algebra.UnitSimplex6D___repr__(self)
5016 def __cmp__(self, arg2):
5017 r"""__cmp__(UnitSimplex6D self, UnitSimplex6D arg2) -> int"""
5018 return _IMP_algebra.UnitSimplex6D___cmp__(self, arg2)
5020 def __eq__(self, arg2):
5021 r"""__eq__(UnitSimplex6D self, UnitSimplex6D arg2) -> bool"""
5022 return _IMP_algebra.UnitSimplex6D___eq__(self, arg2)
5024 def _get_as_binary(self):
5025 r"""_get_as_binary(UnitSimplex6D self) -> PyObject *"""
5026 return _IMP_algebra.UnitSimplex6D__get_as_binary(self)
5028 def _set_from_binary(self, p):
5029 r"""_set_from_binary(UnitSimplex6D self, PyObject * p)"""
5030 return _IMP_algebra.UnitSimplex6D__set_from_binary(self, p)
5032 def __getstate__(self):
5033 p = self._get_as_binary()
5034 if len(self.__dict__) > 1:
5035 d = self.__dict__.copy()
5040 def __setstate__(self, p):
5041 if not hasattr(self,
'this'):
5043 if isinstance(p, tuple):
5045 self.__dict__.update(d)
5046 return self._set_from_binary(p)
5048 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex6D
5051 _IMP_algebra.UnitSimplex6D_swigregister(UnitSimplex6D)
5052 class UnitSimplexKD(_UnitSimplexBaseKD):
5053 r"""Proxy of C++ IMP::algebra::UnitSimplexD< -1 > class."""
5055 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5056 __repr__ = _swig_repr
5058 def __init__(self, d=1):
5059 r"""__init__(UnitSimplexKD self, int d=1) -> UnitSimplexKD"""
5060 _IMP_algebra.UnitSimplexKD_swiginit(self, _IMP_algebra.new_UnitSimplexKD(d))
5062 def show(self, *args):
5063 r"""show(UnitSimplexKD self, _ostream out=std::cout)"""
5064 return _IMP_algebra.UnitSimplexKD_show(self, *args)
5066 def _get_as_binary(self):
5067 r"""_get_as_binary(UnitSimplexKD self) -> PyObject *"""
5068 return _IMP_algebra.UnitSimplexKD__get_as_binary(self)
5070 def _set_from_binary(self, p):
5071 r"""_set_from_binary(UnitSimplexKD self, PyObject * p)"""
5072 return _IMP_algebra.UnitSimplexKD__set_from_binary(self, p)
5074 def __getstate__(self):
5075 p = self._get_as_binary()
5076 if len(self.__dict__) > 1:
5077 d = self.__dict__.copy()
5082 def __setstate__(self, p):
5083 if not hasattr(self,
'this'):
5085 if isinstance(p, tuple):
5087 self.__dict__.update(d)
5088 return self._set_from_binary(p)
5090 __swig_destroy__ = _IMP_algebra.delete_UnitSimplexKD
5093 _IMP_algebra.UnitSimplexKD_swigregister(UnitSimplexKD)
5094 class ReferenceFrame3D(object):
5095 r"""Proxy of C++ IMP::algebra::ReferenceFrame3D class."""
5097 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5099 def __init__(self, *args):
5101 __init__(ReferenceFrame3D self, ReferenceFrame3D arg2) -> ReferenceFrame3D
5102 __init__(ReferenceFrame3D self) -> ReferenceFrame3D
5103 __init__(ReferenceFrame3D self, Transformation3D tr) -> ReferenceFrame3D
5105 _IMP_algebra.ReferenceFrame3D_swiginit(self, _IMP_algebra.new_ReferenceFrame3D(*args))
5106 __swig_destroy__ = _IMP_algebra.delete_ReferenceFrame3D
5108 def get_transformation_to(self):
5109 r"""get_transformation_to(ReferenceFrame3D self) -> Transformation3D"""
5110 return _IMP_algebra.ReferenceFrame3D_get_transformation_to(self)
5112 def get_transformation_from(self):
5113 r"""get_transformation_from(ReferenceFrame3D self) -> Transformation3D"""
5114 return _IMP_algebra.ReferenceFrame3D_get_transformation_from(self)
5116 def get_global_coordinates(self, v):
5117 r"""get_global_coordinates(ReferenceFrame3D self, Vector3D v) -> Vector3D"""
5118 return _IMP_algebra.ReferenceFrame3D_get_global_coordinates(self, v)
5120 def get_local_coordinates(self, v):
5121 r"""get_local_coordinates(ReferenceFrame3D self, Vector3D v) -> Vector3D"""
5122 return _IMP_algebra.ReferenceFrame3D_get_local_coordinates(self, v)
5124 def get_global_reference_frame(self, v):
5125 r"""get_global_reference_frame(ReferenceFrame3D self, ReferenceFrame3D v) -> ReferenceFrame3D"""
5126 return _IMP_algebra.ReferenceFrame3D_get_global_reference_frame(self, v)
5128 def get_local_reference_frame(self, v):
5129 r"""get_local_reference_frame(ReferenceFrame3D self, ReferenceFrame3D v) -> ReferenceFrame3D"""
5130 return _IMP_algebra.ReferenceFrame3D_get_local_reference_frame(self, v)
5132 def show(self, *args):
5133 r"""show(ReferenceFrame3D self, _ostream out=std::cout)"""
5134 return _IMP_algebra.ReferenceFrame3D_show(self, *args)
5137 r"""__str__(ReferenceFrame3D self) -> std::string"""
5138 return _IMP_algebra.ReferenceFrame3D___str__(self)
5141 r"""__repr__(ReferenceFrame3D self) -> std::string"""
5142 return _IMP_algebra.ReferenceFrame3D___repr__(self)
5144 def _get_as_binary(self):
5145 r"""_get_as_binary(ReferenceFrame3D self) -> PyObject *"""
5146 return _IMP_algebra.ReferenceFrame3D__get_as_binary(self)
5148 def _set_from_binary(self, p):
5149 r"""_set_from_binary(ReferenceFrame3D self, PyObject * p)"""
5150 return _IMP_algebra.ReferenceFrame3D__set_from_binary(self, p)
5152 def __getstate__(self):
5153 p = self._get_as_binary()
5154 if len(self.__dict__) > 1:
5155 d = self.__dict__.copy()
5160 def __setstate__(self, p):
5161 if not hasattr(self,
'this'):
5163 if isinstance(p, tuple):
5165 self.__dict__.update(d)
5166 return self._set_from_binary(p)
5170 _IMP_algebra.ReferenceFrame3D_swigregister(ReferenceFrame3D)
5172 def get_transformed(*args):
5174 get_transformed(BoundingBox3D bb, Transformation3D tr) -> BoundingBox3D
5175 get_transformed(Line3D l, Transformation3D tr) -> Line3D
5176 get_transformed(ReferenceFrame3D rf, Transformation3D tr) -> ReferenceFrame3D
5178 return _IMP_algebra.get_transformed(*args)
5180 def get_transformation_from_first_to_second(a, b):
5181 r"""get_transformation_from_first_to_second(ReferenceFrame3D a, ReferenceFrame3D b) -> Transformation3D"""
5182 return _IMP_algebra.get_transformation_from_first_to_second(a, b)
5183 class SphericalVector3D(_GeometricPrimitive3D):
5184 r"""Proxy of C++ IMP::algebra::SphericalVector3D class."""
5186 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5188 def __init__(self, *args):
5190 __init__(SphericalVector3D self) -> SphericalVector3D
5191 __init__(SphericalVector3D self, Vector3D v) -> SphericalVector3D
5192 __init__(SphericalVector3D self, double r, double theta, double psi, bool apply_check=True) -> SphericalVector3D
5194 _IMP_algebra.SphericalVector3D_swiginit(self, _IMP_algebra.new_SphericalVector3D(*args))
5196 def get_cartesian_coordinates(self):
5197 r"""get_cartesian_coordinates(SphericalVector3D self) -> Vector3D"""
5198 return _IMP_algebra.SphericalVector3D_get_cartesian_coordinates(self)
5200 def show(self, *args):
5201 r"""show(SphericalVector3D self, _ostream out=std::cout)"""
5202 return _IMP_algebra.SphericalVector3D_show(self, *args)
5205 r"""__str__(SphericalVector3D self) -> std::string"""
5206 return _IMP_algebra.SphericalVector3D___str__(self)
5209 r"""__repr__(SphericalVector3D self) -> std::string"""
5210 return _IMP_algebra.SphericalVector3D___repr__(self)
5212 def _get_as_binary(self):
5213 r"""_get_as_binary(SphericalVector3D self) -> PyObject *"""
5214 return _IMP_algebra.SphericalVector3D__get_as_binary(self)
5216 def _set_from_binary(self, p):
5217 r"""_set_from_binary(SphericalVector3D self, PyObject * p)"""
5218 return _IMP_algebra.SphericalVector3D__set_from_binary(self, p)
5220 def __getstate__(self):
5221 p = self._get_as_binary()
5222 if len(self.__dict__) > 1:
5223 d = self.__dict__.copy()
5228 def __setstate__(self, p):
5229 if not hasattr(self,
'this'):
5231 if isinstance(p, tuple):
5233 self.__dict__.update(d)
5234 return self._set_from_binary(p)
5237 def __getitem__(self, index):
5238 r"""__getitem__(SphericalVector3D self, unsigned int index) -> double"""
5239 return _IMP_algebra.SphericalVector3D___getitem__(self, index)
5241 def __setitem__(self, index, val):
5242 r"""__setitem__(SphericalVector3D self, unsigned int index, double val)"""
5243 return _IMP_algebra.SphericalVector3D___setitem__(self, index, val)
5244 __swig_destroy__ = _IMP_algebra.delete_SphericalVector3D
5247 _IMP_algebra.SphericalVector3D_swigregister(SphericalVector3D)
5250 r"""get_alignments_from_first_to_second(PrincipalComponentAnalysis3D pca1, PrincipalComponentAnalysis3D pca2) -> IMP::algebra::Transformation3Ds"""
5251 return _IMP_algebra.get_alignments_from_first_to_second(pca1, pca2)
5252 class Line3D(_GeometricPrimitive3D):
5253 r"""Proxy of C++ IMP::algebra::Line3D class."""
5255 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5257 def __init__(self, *args):
5259 __init__(Line3D self) -> Line3D
5260 __init__(Line3D self, Vector3D direction, Vector3D point_on_line) -> Line3D
5261 __init__(Line3D self, Segment3D s) -> Line3D
5263 _IMP_algebra.Line3D_swiginit(self, _IMP_algebra.new_Line3D(*args))
5265 def get_direction(self):
5266 r"""get_direction(Line3D self) -> Vector3D"""
5267 return _IMP_algebra.Line3D_get_direction(self)
5269 def get_point_on_line(self):
5270 r"""get_point_on_line(Line3D self) -> Vector3D"""
5271 return _IMP_algebra.Line3D_get_point_on_line(self)
5273 def get_moment(self, *args):
5275 get_moment(Line3D self) -> Vector3D
5276 get_moment(Line3D self, Vector3D v) -> Vector3D
5278 return _IMP_algebra.Line3D_get_moment(self, *args)
5280 def get_reciprocal_product(self, l):
5281 r"""get_reciprocal_product(Line3D self, Line3D l) -> double"""
5282 return _IMP_algebra.Line3D_get_reciprocal_product(self, l)
5284 def get_opposite(self):
5285 r"""get_opposite(Line3D self) -> Line3D"""
5286 return _IMP_algebra.Line3D_get_opposite(self)
5288 def get_segment_starting_at(self, v, d):
5289 r"""get_segment_starting_at(Line3D self, Vector3D v, double d) -> Segment3D"""
5290 return _IMP_algebra.Line3D_get_segment_starting_at(self, v, d)
5292 def show(self, *args):
5293 r"""show(Line3D self, _ostream out=std::cout)"""
5294 return _IMP_algebra.Line3D_show(self, *args)
5297 r"""__str__(Line3D self) -> std::string"""
5298 return _IMP_algebra.Line3D___str__(self)
5301 r"""__repr__(Line3D self) -> std::string"""
5302 return _IMP_algebra.Line3D___repr__(self)
5304 def _get_as_binary(self):
5305 r"""_get_as_binary(Line3D self) -> PyObject *"""
5306 return _IMP_algebra.Line3D__get_as_binary(self)
5308 def _set_from_binary(self, p):
5309 r"""_set_from_binary(Line3D self, PyObject * p)"""
5310 return _IMP_algebra.Line3D__set_from_binary(self, p)
5312 def __getstate__(self):
5313 p = self._get_as_binary()
5314 if len(self.__dict__) > 1:
5315 d = self.__dict__.copy()
5320 def __setstate__(self, p):
5321 if not hasattr(self,
'this'):
5323 if isinstance(p, tuple):
5325 self.__dict__.update(d)
5326 return self._set_from_binary(p)
5328 __swig_destroy__ = _IMP_algebra.delete_Line3D
5331 _IMP_algebra.Line3D_swigregister(Line3D)
5333 def get_line_3d_geometry(g):
5334 r"""get_line_3d_geometry(Line3D g) -> Line3D"""
5335 return _IMP_algebra.get_line_3d_geometry(g)
5338 r"""get_angle(Line3D a, Line3D b) -> double"""
5339 return _IMP_algebra.get_angle(a, b)
5342 r"""get_segment_connecting_first_to_second(Line3D a, Line3D b) -> Segment3D"""
5343 return _IMP_algebra.get_segment_connecting_first_to_second(a, b)
5344 class Segment3D(_GeometricPrimitive3D):
5345 r"""Proxy of C++ IMP::algebra::Segment3D class."""
5347 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5349 def __init__(self, *args):
5351 __init__(Segment3D self) -> Segment3D
5352 __init__(Segment3D self, Vector3D start, Vector3D end) -> Segment3D
5354 _IMP_algebra.Segment3D_swiginit(self, _IMP_algebra.new_Segment3D(*args))
5356 def get_point(self, i):
5359 return _IMP_algebra.Segment3D_get_point(self, i)
5363 def get_middle_point(self):
5364 r"""get_middle_point(Segment3D self) -> Vector3D"""
5365 return _IMP_algebra.Segment3D_get_middle_point(self)
5367 def get_direction(self):
5368 r"""get_direction(Segment3D self) -> Vector3D"""
5369 return _IMP_algebra.Segment3D_get_direction(self)
5371 def get_length(self):
5372 r"""get_length(Segment3D self) -> double"""
5373 return _IMP_algebra.Segment3D_get_length(self)
5375 def show(self, *args):
5376 r"""show(Segment3D self, _ostream out=std::cout)"""
5377 return _IMP_algebra.Segment3D_show(self, *args)
5380 r"""__str__(Segment3D self) -> std::string"""
5381 return _IMP_algebra.Segment3D___str__(self)
5384 r"""__repr__(Segment3D self) -> std::string"""
5385 return _IMP_algebra.Segment3D___repr__(self)
5387 def _get_as_binary(self):
5388 r"""_get_as_binary(Segment3D self) -> PyObject *"""
5389 return _IMP_algebra.Segment3D__get_as_binary(self)
5391 def _set_from_binary(self, p):
5392 r"""_set_from_binary(Segment3D self, PyObject * p)"""
5393 return _IMP_algebra.Segment3D__set_from_binary(self, p)
5395 def __getstate__(self):
5396 p = self._get_as_binary()
5397 if len(self.__dict__) > 1:
5398 d = self.__dict__.copy()
5403 def __setstate__(self, p):
5404 if not hasattr(self,
'this'):
5406 if isinstance(p, tuple):
5408 self.__dict__.update(d)
5409 return self._set_from_binary(p)
5411 __swig_destroy__ = _IMP_algebra.delete_Segment3D
5414 _IMP_algebra.Segment3D_swigregister(Segment3D)
5416 def get_segment_3d_geometry(g):
5417 r"""get_segment_3d_geometry(Segment3D g) -> Segment3D"""
5418 return _IMP_algebra.get_segment_3d_geometry(g)
5421 r"""get_relative_projection_on_segment(Segment3D s, Vector3D p) -> double"""
5422 return _IMP_algebra.get_relative_projection_on_segment(s, p)
5423 class Triangle3D(_GeometricPrimitive3D):
5424 r"""Proxy of C++ IMP::algebra::Triangle3D class."""
5426 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5428 def __init__(self, *args):
5430 __init__(Triangle3D self) -> Triangle3D
5431 __init__(Triangle3D self, Vector3D p1, Vector3D p2, Vector3D p3) -> Triangle3D
5433 _IMP_algebra.Triangle3D_swiginit(self, _IMP_algebra.new_Triangle3D(*args))
5435 def get_point(self, i):
5436 r"""get_point(Triangle3D self, unsigned int i) -> Vector3D"""
5437 return _IMP_algebra.Triangle3D_get_point(self, i)
5439 def show(self, *args):
5440 r"""show(Triangle3D self, _ostream out=std::cout)"""
5441 return _IMP_algebra.Triangle3D_show(self, *args)
5443 def get_edge_lengths(self):
5444 r"""get_edge_lengths(Triangle3D self) -> IMP::Floats"""
5445 return _IMP_algebra.Triangle3D_get_edge_lengths(self)
5448 r"""__str__(Triangle3D self) -> std::string"""
5449 return _IMP_algebra.Triangle3D___str__(self)
5452 r"""__repr__(Triangle3D self) -> std::string"""
5453 return _IMP_algebra.Triangle3D___repr__(self)
5455 def _get_as_binary(self):
5456 r"""_get_as_binary(Triangle3D self) -> PyObject *"""
5457 return _IMP_algebra.Triangle3D__get_as_binary(self)
5459 def _set_from_binary(self, p):
5460 r"""_set_from_binary(Triangle3D self, PyObject * p)"""
5461 return _IMP_algebra.Triangle3D__set_from_binary(self, p)
5463 def __getstate__(self):
5464 p = self._get_as_binary()
5465 if len(self.__dict__) > 1:
5466 d = self.__dict__.copy()
5471 def __setstate__(self, p):
5472 if not hasattr(self,
'this'):
5474 if isinstance(p, tuple):
5476 self.__dict__.update(d)
5477 return self._set_from_binary(p)
5479 __swig_destroy__ = _IMP_algebra.delete_Triangle3D
5482 _IMP_algebra.Triangle3D_swigregister(Triangle3D)
5485 r"""get_largest_triangle(IMP::algebra::Vector3Ds const & points) -> Triangle3D"""
5486 return _IMP_algebra.get_largest_triangle(points)
5489 r"""get_transformation_from_first_triangle_to_second(Triangle3D first_tri, Triangle3D second_tri) -> Transformation3D"""
5490 return _IMP_algebra.get_transformation_from_first_triangle_to_second(first_tri, second_tri)
5493 r"""get_are_colinear(Vector3D p1, Vector3D p2, Vector3D p3) -> bool"""
5494 return _IMP_algebra.get_are_colinear(p1, p2, p3)
5495 class LinearFit2D(_GeometricPrimitive2D):
5496 r"""Proxy of C++ IMP::algebra::LinearFit2D class."""
5498 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5500 def __init__(self, *args):
5502 __init__(LinearFit2D self) -> LinearFit2D
5503 __init__(LinearFit2D self, IMP::algebra::Vector2Ds const & data, IMP::Floats const & error_bars=IMP::Floats()) -> LinearFit2D
5505 _IMP_algebra.LinearFit2D_swiginit(self, _IMP_algebra.new_LinearFit2D(*args))
5507 def get_fit_error(self):
5508 r"""get_fit_error(LinearFit2D self) -> double"""
5509 return _IMP_algebra.LinearFit2D_get_fit_error(self)
5512 r"""get_a(LinearFit2D self) -> double"""
5513 return _IMP_algebra.LinearFit2D_get_a(self)
5516 r"""get_b(LinearFit2D self) -> double"""
5517 return _IMP_algebra.LinearFit2D_get_b(self)
5519 def show(self, *args):
5520 r"""show(LinearFit2D self, _ostream out=std::cout)"""
5521 return _IMP_algebra.LinearFit2D_show(self, *args)
5524 r"""__str__(LinearFit2D self) -> std::string"""
5525 return _IMP_algebra.LinearFit2D___str__(self)
5528 r"""__repr__(LinearFit2D self) -> std::string"""
5529 return _IMP_algebra.LinearFit2D___repr__(self)
5531 def _get_as_binary(self):
5532 r"""_get_as_binary(LinearFit2D self) -> PyObject *"""
5533 return _IMP_algebra.LinearFit2D__get_as_binary(self)
5535 def _set_from_binary(self, p):
5536 r"""_set_from_binary(LinearFit2D self, PyObject * p)"""
5537 return _IMP_algebra.LinearFit2D__set_from_binary(self, p)
5539 def __getstate__(self):
5540 p = self._get_as_binary()
5541 if len(self.__dict__) > 1:
5542 d = self.__dict__.copy()
5547 def __setstate__(self, p):
5548 if not hasattr(self,
'this'):
5550 if isinstance(p, tuple):
5552 self.__dict__.update(d)
5553 return self._set_from_binary(p)
5555 __swig_destroy__ = _IMP_algebra.delete_LinearFit2D
5558 _IMP_algebra.LinearFit2D_swigregister(LinearFit2D)
5559 class ParabolicFit2D(_GeometricPrimitive2D):
5560 r"""Proxy of C++ IMP::algebra::ParabolicFit2D class."""
5562 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5564 def __init__(self, *args):
5566 __init__(ParabolicFit2D self) -> ParabolicFit2D
5567 __init__(ParabolicFit2D self, IMP::algebra::Vector2Ds const & data) -> ParabolicFit2D
5569 _IMP_algebra.ParabolicFit2D_swiginit(self, _IMP_algebra.new_ParabolicFit2D(*args))
5571 def get_fit_error(self):
5572 r"""get_fit_error(ParabolicFit2D self) -> double"""
5573 return _IMP_algebra.ParabolicFit2D_get_fit_error(self)
5576 r"""get_a(ParabolicFit2D self) -> double"""
5577 return _IMP_algebra.ParabolicFit2D_get_a(self)
5580 r"""get_b(ParabolicFit2D self) -> double"""
5581 return _IMP_algebra.ParabolicFit2D_get_b(self)
5584 r"""get_c(ParabolicFit2D self) -> double"""
5585 return _IMP_algebra.ParabolicFit2D_get_c(self)
5587 def show(self, *args):
5588 r"""show(ParabolicFit2D self, _ostream out=std::cout)"""
5589 return _IMP_algebra.ParabolicFit2D_show(self, *args)
5592 r"""__str__(ParabolicFit2D self) -> std::string"""
5593 return _IMP_algebra.ParabolicFit2D___str__(self)
5596 r"""__repr__(ParabolicFit2D self) -> std::string"""
5597 return _IMP_algebra.ParabolicFit2D___repr__(self)
5599 def _get_as_binary(self):
5600 r"""_get_as_binary(ParabolicFit2D self) -> PyObject *"""
5601 return _IMP_algebra.ParabolicFit2D__get_as_binary(self)
5603 def _set_from_binary(self, p):
5604 r"""_set_from_binary(ParabolicFit2D self, PyObject * p)"""
5605 return _IMP_algebra.ParabolicFit2D__set_from_binary(self, p)
5607 def __getstate__(self):
5608 p = self._get_as_binary()
5609 if len(self.__dict__) > 1:
5610 d = self.__dict__.copy()
5615 def __setstate__(self, p):
5616 if not hasattr(self,
'this'):
5618 if isinstance(p, tuple):
5620 self.__dict__.update(d)
5621 return self._set_from_binary(p)
5623 __swig_destroy__ = _IMP_algebra.delete_ParabolicFit2D
5626 _IMP_algebra.ParabolicFit2D_swigregister(ParabolicFit2D)
5627 class Plane3D(_GeometricPrimitive3D):
5628 r"""Proxy of C++ IMP::algebra::Plane3D class."""
5630 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5632 def __init__(self, *args):
5634 __init__(Plane3D self) -> Plane3D
5635 __init__(Plane3D self, Vector3D point_on_plane, Vector3D normal_to_plane) -> Plane3D
5636 __init__(Plane3D self, double distance_to_plane, Vector3D normal_to_plane) -> Plane3D
5638 _IMP_algebra.Plane3D_swiginit(self, _IMP_algebra.new_Plane3D(*args))
5640 def get_point_on_plane(self):
5641 r"""get_point_on_plane(Plane3D self) -> Vector3D"""
5642 return _IMP_algebra.Plane3D_get_point_on_plane(self)
5644 def get_normal(self):
5645 r"""get_normal(Plane3D self) -> Vector3D"""
5646 return _IMP_algebra.Plane3D_get_normal(self)
5649 r"""get_projected(Plane3D self, Vector3D p) -> Vector3D"""
5650 return _IMP_algebra.Plane3D_get_projected(self, p)
5652 def get_is_above(self, p):
5653 r"""get_is_above(Plane3D self, Vector3D p) -> bool"""
5654 return _IMP_algebra.Plane3D_get_is_above(self, p)
5656 def get_is_below(self, p):
5657 r"""get_is_below(Plane3D self, Vector3D p) -> bool"""
5658 return _IMP_algebra.Plane3D_get_is_below(self, p)
5661 r"""get_height(Plane3D self, Vector3D p) -> double"""
5662 return _IMP_algebra.Plane3D_get_height(self, p)
5664 def show(self, *args):
5665 r"""show(Plane3D self, _ostream out=std::cout)"""
5666 return _IMP_algebra.Plane3D_show(self, *args)
5668 def get_opposite(self):
5669 r"""get_opposite(Plane3D self) -> Plane3D"""
5670 return _IMP_algebra.Plane3D_get_opposite(self)
5672 def get_distance_from_origin(self):
5673 r"""get_distance_from_origin(Plane3D self) -> double"""
5674 return _IMP_algebra.Plane3D_get_distance_from_origin(self)
5677 r"""__str__(Plane3D self) -> std::string"""
5678 return _IMP_algebra.Plane3D___str__(self)
5681 r"""__repr__(Plane3D self) -> std::string"""
5682 return _IMP_algebra.Plane3D___repr__(self)
5684 def _get_as_binary(self):
5685 r"""_get_as_binary(Plane3D self) -> PyObject *"""
5686 return _IMP_algebra.Plane3D__get_as_binary(self)
5688 def _set_from_binary(self, p):
5689 r"""_set_from_binary(Plane3D self, PyObject * p)"""
5690 return _IMP_algebra.Plane3D__set_from_binary(self, p)
5692 def __getstate__(self):
5693 p = self._get_as_binary()
5694 if len(self.__dict__) > 1:
5695 d = self.__dict__.copy()
5700 def __setstate__(self, p):
5701 if not hasattr(self,
'this'):
5703 if isinstance(p, tuple):
5705 self.__dict__.update(d)
5706 return self._set_from_binary(p)
5708 __swig_destroy__ = _IMP_algebra.delete_Plane3D
5711 _IMP_algebra.Plane3D_swigregister(Plane3D)
5714 r"""get_reflected(Plane3D pln, Vector3D p) -> Vector3D"""
5715 return _IMP_algebra.get_reflected(pln, p)
5717 def get_plane_3d_geometry(g):
5718 r"""get_plane_3d_geometry(Plane3D g) -> Plane3D"""
5719 return _IMP_algebra.get_plane_3d_geometry(g)
5720 class Reflection3D(_GeometricPrimitive3D):
5721 r"""Proxy of C++ IMP::algebra::Reflection3D class."""
5723 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5725 def __init__(self, *args):
5727 __init__(Reflection3D self) -> Reflection3D
5728 __init__(Reflection3D self, Plane3D pl) -> Reflection3D
5730 _IMP_algebra.Reflection3D_swiginit(self, _IMP_algebra.new_Reflection3D(*args))
5733 r"""get_reflected(Reflection3D self, Vector3D v) -> Vector3D"""
5734 return _IMP_algebra.Reflection3D_get_reflected(self, v)
5736 def show(self, *args):
5737 r"""show(Reflection3D self, _ostream out=std::cout)"""
5738 return _IMP_algebra.Reflection3D_show(self, *args)
5741 r"""__str__(Reflection3D self) -> std::string"""
5742 return _IMP_algebra.Reflection3D___str__(self)
5745 r"""__repr__(Reflection3D self) -> std::string"""
5746 return _IMP_algebra.Reflection3D___repr__(self)
5748 def _get_as_binary(self):
5749 r"""_get_as_binary(Reflection3D self) -> PyObject *"""
5750 return _IMP_algebra.Reflection3D__get_as_binary(self)
5752 def _set_from_binary(self, p):
5753 r"""_set_from_binary(Reflection3D self, PyObject * p)"""
5754 return _IMP_algebra.Reflection3D__set_from_binary(self, p)
5756 def __getstate__(self):
5757 p = self._get_as_binary()
5758 if len(self.__dict__) > 1:
5759 d = self.__dict__.copy()
5764 def __setstate__(self, p):
5765 if not hasattr(self,
'this'):
5767 if isinstance(p, tuple):
5769 self.__dict__.update(d)
5770 return self._set_from_binary(p)
5772 __swig_destroy__ = _IMP_algebra.delete_Reflection3D
5775 _IMP_algebra.Reflection3D_swigregister(Reflection3D)
5776 class Cylinder3D(_GeometricPrimitive3D):
5777 r"""Proxy of C++ IMP::algebra::Cylinder3D class."""
5779 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5781 def __init__(self, *args):
5783 __init__(Cylinder3D self) -> Cylinder3D
5784 __init__(Cylinder3D self, Segment3D s, double radius) -> Cylinder3D
5786 _IMP_algebra.Cylinder3D_swiginit(self, _IMP_algebra.new_Cylinder3D(*args))
5788 def get_radius(self):
5789 r"""get_radius(Cylinder3D self) -> double"""
5790 return _IMP_algebra.Cylinder3D_get_radius(self)
5793 r"""get_segment(Cylinder3D self) -> Segment3D"""
5794 return _IMP_algebra.Cylinder3D_get_segment(self)
5796 def get_surface_point_at(self, relative_height, angle):
5797 r"""get_surface_point_at(Cylinder3D self, double relative_height, double angle) -> Vector3D"""
5798 return _IMP_algebra.Cylinder3D_get_surface_point_at(self, relative_height, angle)
5800 def get_inner_point_at(self, relative_height, relative_radius, angle):
5801 r"""get_inner_point_at(Cylinder3D self, double relative_height, double relative_radius, double angle) -> Vector3D"""
5802 return _IMP_algebra.Cylinder3D_get_inner_point_at(self, relative_height, relative_radius, angle)
5804 def show(self, *args):
5805 r"""show(Cylinder3D self, _ostream out=std::cout)"""
5806 return _IMP_algebra.Cylinder3D_show(self, *args)
5809 r"""__str__(Cylinder3D self) -> std::string"""
5810 return _IMP_algebra.Cylinder3D___str__(self)
5813 r"""__repr__(Cylinder3D self) -> std::string"""
5814 return _IMP_algebra.Cylinder3D___repr__(self)
5816 def _get_as_binary(self):
5817 r"""_get_as_binary(Cylinder3D self) -> PyObject *"""
5818 return _IMP_algebra.Cylinder3D__get_as_binary(self)
5820 def _set_from_binary(self, p):
5821 r"""_set_from_binary(Cylinder3D self, PyObject * p)"""
5822 return _IMP_algebra.Cylinder3D__set_from_binary(self, p)
5824 def __getstate__(self):
5825 p = self._get_as_binary()
5826 if len(self.__dict__) > 1:
5827 d = self.__dict__.copy()
5832 def __setstate__(self, p):
5833 if not hasattr(self,
'this'):
5835 if isinstance(p, tuple):
5837 self.__dict__.update(d)
5838 return self._set_from_binary(p)
5840 __swig_destroy__ = _IMP_algebra.delete_Cylinder3D
5843 _IMP_algebra.Cylinder3D_swigregister(Cylinder3D)
5845 def get_cylinder_3d_geometry(g):
5846 r"""get_cylinder_3d_geometry(Cylinder3D g) -> Cylinder3D"""
5847 return _IMP_algebra.get_cylinder_3d_geometry(g)
5848 class Ellipsoid3D(_GeometricPrimitive3D):
5849 r"""Proxy of C++ IMP::algebra::Ellipsoid3D class."""
5851 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5853 def __init__(self, *args):
5855 __init__(Ellipsoid3D self) -> Ellipsoid3D
5856 __init__(Ellipsoid3D self, ReferenceFrame3D rf, Vector3D radii) -> Ellipsoid3D
5857 __init__(Ellipsoid3D self, Vector3D center, double radius_x, double radius_y, double radius_z, Rotation3D rot) -> Ellipsoid3D
5859 _IMP_algebra.Ellipsoid3D_swiginit(self, _IMP_algebra.new_Ellipsoid3D(*args))
5861 def get_radii(self):
5862 r"""get_radii(Ellipsoid3D self) -> Vector3D"""
5863 return _IMP_algebra.Ellipsoid3D_get_radii(self)
5865 def get_reference_frame(self):
5866 r"""get_reference_frame(Ellipsoid3D self) -> ReferenceFrame3D"""
5867 return _IMP_algebra.Ellipsoid3D_get_reference_frame(self)
5869 def show(self, *args):
5870 r"""show(Ellipsoid3D self, _ostream out=std::cout)"""
5871 return _IMP_algebra.Ellipsoid3D_show(self, *args)
5874 r"""__str__(Ellipsoid3D self) -> std::string"""
5875 return _IMP_algebra.Ellipsoid3D___str__(self)
5878 r"""__repr__(Ellipsoid3D self) -> std::string"""
5879 return _IMP_algebra.Ellipsoid3D___repr__(self)
5881 def _get_as_binary(self):
5882 r"""_get_as_binary(Ellipsoid3D self) -> PyObject *"""
5883 return _IMP_algebra.Ellipsoid3D__get_as_binary(self)
5885 def _set_from_binary(self, p):
5886 r"""_set_from_binary(Ellipsoid3D self, PyObject * p)"""
5887 return _IMP_algebra.Ellipsoid3D__set_from_binary(self, p)
5889 def __getstate__(self):
5890 p = self._get_as_binary()
5891 if len(self.__dict__) > 1:
5892 d = self.__dict__.copy()
5897 def __setstate__(self, p):
5898 if not hasattr(self,
'this'):
5900 if isinstance(p, tuple):
5902 self.__dict__.update(d)
5903 return self._set_from_binary(p)
5905 __swig_destroy__ = _IMP_algebra.delete_Ellipsoid3D
5908 _IMP_algebra.Ellipsoid3D_swigregister(Ellipsoid3D)
5910 def get_ellipsoid_3d_geometry(g):
5911 r"""get_ellipsoid_3d_geometry(Ellipsoid3D g) -> Ellipsoid3D"""
5912 return _IMP_algebra.get_ellipsoid_3d_geometry(g)
5913 class ConnollySurfacePoint(object):
5914 r"""Proxy of C++ IMP::algebra::ConnollySurfacePoint class."""
5916 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5918 def __init__(self, *args):
5920 __init__(ConnollySurfacePoint self) -> ConnollySurfacePoint
5921 __init__(ConnollySurfacePoint self, int a0, int a1, int a2, Vector3D sp, float a, Vector3D n) -> ConnollySurfacePoint
5923 _IMP_algebra.ConnollySurfacePoint_swiginit(self, _IMP_algebra.new_ConnollySurfacePoint(*args))
5926 r"""get_atom(ConnollySurfacePoint self, unsigned int i) -> int"""
5927 return _IMP_algebra.ConnollySurfacePoint_get_atom(self, i)
5929 def get_surface_point(self):
5930 r"""get_surface_point(ConnollySurfacePoint self) -> Vector3D"""
5931 return _IMP_algebra.ConnollySurfacePoint_get_surface_point(self)
5934 r"""get_area(ConnollySurfacePoint self) -> double"""
5935 return _IMP_algebra.ConnollySurfacePoint_get_area(self)
5937 def get_normal(self):
5938 r"""get_normal(ConnollySurfacePoint self) -> Vector3D"""
5939 return _IMP_algebra.ConnollySurfacePoint_get_normal(self)
5941 def show(self, *args):
5942 r"""show(ConnollySurfacePoint self, _ostream out=std::cout)"""
5943 return _IMP_algebra.ConnollySurfacePoint_show(self, *args)
5946 r"""__str__(ConnollySurfacePoint self) -> std::string"""
5947 return _IMP_algebra.ConnollySurfacePoint___str__(self)
5950 r"""__repr__(ConnollySurfacePoint self) -> std::string"""
5951 return _IMP_algebra.ConnollySurfacePoint___repr__(self)
5953 def _get_as_binary(self):
5954 r"""_get_as_binary(ConnollySurfacePoint self) -> PyObject *"""
5955 return _IMP_algebra.ConnollySurfacePoint__get_as_binary(self)
5957 def _set_from_binary(self, p):
5958 r"""_set_from_binary(ConnollySurfacePoint self, PyObject * p)"""
5959 return _IMP_algebra.ConnollySurfacePoint__set_from_binary(self, p)
5961 def __getstate__(self):
5962 p = self._get_as_binary()
5963 if len(self.__dict__) > 1:
5964 d = self.__dict__.copy()
5969 def __setstate__(self, p):
5970 if not hasattr(self,
'this'):
5972 if isinstance(p, tuple):
5974 self.__dict__.update(d)
5975 return self._set_from_binary(p)
5977 __swig_destroy__ = _IMP_algebra.delete_ConnollySurfacePoint
5980 _IMP_algebra.ConnollySurfacePoint_swigregister(ConnollySurfacePoint)
5983 r"""get_connolly_surface(IMP::algebra::Sphere3Ds const & spheres, double density, double probe_radius) -> IMP::algebra::ConnollySurfacePoints"""
5984 return _IMP_algebra.get_connolly_surface(spheres, density, probe_radius)
5985 class LogEmbedding3D(object):
5986 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 3 > class."""
5988 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5990 def __init__(self, *args):
5992 __init__(LogEmbedding3D self, Vector3D origin, Vector3D cell, Vector3D base) -> LogEmbedding3D
5993 __init__(LogEmbedding3D self, BoundingBox3D bb, Vector3D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding3D
5994 __init__(LogEmbedding3D self, Vector3D arg2, Vector3D arg3) -> LogEmbedding3D
5995 __init__(LogEmbedding3D self) -> LogEmbedding3D
5997 _IMP_algebra.LogEmbedding3D_swiginit(self, _IMP_algebra.new_LogEmbedding3D(*args))
5999 def set_origin(self, o):
6000 r"""set_origin(LogEmbedding3D self, Vector3D o)"""
6001 return _IMP_algebra.LogEmbedding3D_set_origin(self, o)
6003 def get_origin(self):
6004 r"""get_origin(LogEmbedding3D self) -> Vector3D"""
6005 return _IMP_algebra.LogEmbedding3D_get_origin(self)
6007 def get_dimension(self):
6008 r"""get_dimension(LogEmbedding3D self) -> unsigned int"""
6009 return _IMP_algebra.LogEmbedding3D_get_dimension(self)
6011 def set_unit_cell(self, *args):
6013 set_unit_cell(LogEmbedding3D self, Vector3D o, Vector3D base)
6014 set_unit_cell(LogEmbedding3D self, Vector3D o)
6016 return _IMP_algebra.LogEmbedding3D_set_unit_cell(self, *args)
6018 def get_unit_cell(self):
6019 r"""get_unit_cell(LogEmbedding3D self) -> Vector3D"""
6020 return _IMP_algebra.LogEmbedding3D_get_unit_cell(self)
6022 def get_extended_index(self, o):
6023 r"""get_extended_index(LogEmbedding3D self, Vector3D o) -> ExtendedGridIndex3D"""
6024 return _IMP_algebra.LogEmbedding3D_get_extended_index(self, o)
6027 r"""get_index(LogEmbedding3D self, Vector3D o) -> GridIndex3D"""
6028 return _IMP_algebra.LogEmbedding3D_get_index(self, o)
6030 def get_center(self, *args):
6032 get_center(LogEmbedding3D self, ExtendedGridIndex3D ei) -> Vector3D
6033 get_center(LogEmbedding3D self, GridIndex3D ei) -> Vector3D
6035 return _IMP_algebra.LogEmbedding3D_get_center(self, *args)
6037 def get_bounding_box(self, *args):
6039 get_bounding_box(LogEmbedding3D self, ExtendedGridIndex3D ei) -> BoundingBox3D
6040 get_bounding_box(LogEmbedding3D self, GridIndex3D ei) -> BoundingBox3D
6042 return _IMP_algebra.LogEmbedding3D_get_bounding_box(self, *args)
6044 def show(self, *args):
6045 r"""show(LogEmbedding3D self, _ostream out=std::cout)"""
6046 return _IMP_algebra.LogEmbedding3D_show(self, *args)
6049 r"""__str__(LogEmbedding3D self) -> std::string"""
6050 return _IMP_algebra.LogEmbedding3D___str__(self)
6053 r"""__repr__(LogEmbedding3D self) -> std::string"""
6054 return _IMP_algebra.LogEmbedding3D___repr__(self)
6056 def __cmp__(self, arg2):
6057 r"""__cmp__(LogEmbedding3D self, LogEmbedding3D arg2) -> int"""
6058 return _IMP_algebra.LogEmbedding3D___cmp__(self, arg2)
6060 def __eq__(self, arg2):
6061 r"""__eq__(LogEmbedding3D self, LogEmbedding3D arg2) -> bool"""
6062 return _IMP_algebra.LogEmbedding3D___eq__(self, arg2)
6064 def _get_as_binary(self):
6065 r"""_get_as_binary(LogEmbedding3D self) -> PyObject *"""
6066 return _IMP_algebra.LogEmbedding3D__get_as_binary(self)
6068 def _set_from_binary(self, p):
6069 r"""_set_from_binary(LogEmbedding3D self, PyObject * p)"""
6070 return _IMP_algebra.LogEmbedding3D__set_from_binary(self, p)
6072 def __getstate__(self):
6073 p = self._get_as_binary()
6074 if len(self.__dict__) > 1:
6075 d = self.__dict__.copy()
6080 def __setstate__(self, p):
6081 if not hasattr(self,
'this'):
6083 if isinstance(p, tuple):
6085 self.__dict__.update(d)
6086 return self._set_from_binary(p)
6088 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding3D
6091 _IMP_algebra.LogEmbedding3D_swigregister(LogEmbedding3D)
6092 class LogEmbeddingKD(object):
6093 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< -1 > class."""
6095 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6097 def __init__(self, *args):
6099 __init__(LogEmbeddingKD self, VectorKD origin, VectorKD cell, VectorKD base) -> LogEmbeddingKD
6100 __init__(LogEmbeddingKD self, BoundingBoxKD bb, VectorKD bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbeddingKD
6101 __init__(LogEmbeddingKD self, VectorKD arg2, VectorKD arg3) -> LogEmbeddingKD
6102 __init__(LogEmbeddingKD self) -> LogEmbeddingKD
6104 _IMP_algebra.LogEmbeddingKD_swiginit(self, _IMP_algebra.new_LogEmbeddingKD(*args))
6106 def set_origin(self, o):
6107 r"""set_origin(LogEmbeddingKD self, VectorKD o)"""
6108 return _IMP_algebra.LogEmbeddingKD_set_origin(self, o)
6110 def get_origin(self):
6111 r"""get_origin(LogEmbeddingKD self) -> VectorKD"""
6112 return _IMP_algebra.LogEmbeddingKD_get_origin(self)
6114 def get_dimension(self):
6115 r"""get_dimension(LogEmbeddingKD self) -> unsigned int"""
6116 return _IMP_algebra.LogEmbeddingKD_get_dimension(self)
6118 def set_unit_cell(self, *args):
6120 set_unit_cell(LogEmbeddingKD self, VectorKD o, VectorKD base)
6121 set_unit_cell(LogEmbeddingKD self, VectorKD o)
6123 return _IMP_algebra.LogEmbeddingKD_set_unit_cell(self, *args)
6125 def get_unit_cell(self):
6126 r"""get_unit_cell(LogEmbeddingKD self) -> VectorKD"""
6127 return _IMP_algebra.LogEmbeddingKD_get_unit_cell(self)
6129 def get_extended_index(self, o):
6130 r"""get_extended_index(LogEmbeddingKD self, VectorKD o) -> ExtendedGridIndexKD"""
6131 return _IMP_algebra.LogEmbeddingKD_get_extended_index(self, o)
6134 r"""get_index(LogEmbeddingKD self, VectorKD o) -> GridIndexKD"""
6135 return _IMP_algebra.LogEmbeddingKD_get_index(self, o)
6137 def get_center(self, *args):
6139 get_center(LogEmbeddingKD self, ExtendedGridIndexKD ei) -> VectorKD
6140 get_center(LogEmbeddingKD self, GridIndexKD ei) -> VectorKD
6142 return _IMP_algebra.LogEmbeddingKD_get_center(self, *args)
6144 def get_bounding_box(self, *args):
6146 get_bounding_box(LogEmbeddingKD self, ExtendedGridIndexKD ei) -> BoundingBoxKD
6147 get_bounding_box(LogEmbeddingKD self, GridIndexKD ei) -> BoundingBoxKD
6149 return _IMP_algebra.LogEmbeddingKD_get_bounding_box(self, *args)
6151 def show(self, *args):
6152 r"""show(LogEmbeddingKD self, _ostream out=std::cout)"""
6153 return _IMP_algebra.LogEmbeddingKD_show(self, *args)
6156 r"""__str__(LogEmbeddingKD self) -> std::string"""
6157 return _IMP_algebra.LogEmbeddingKD___str__(self)
6160 r"""__repr__(LogEmbeddingKD self) -> std::string"""
6161 return _IMP_algebra.LogEmbeddingKD___repr__(self)
6163 def __cmp__(self, arg2):
6164 r"""__cmp__(LogEmbeddingKD self, LogEmbeddingKD arg2) -> int"""
6165 return _IMP_algebra.LogEmbeddingKD___cmp__(self, arg2)
6167 def __eq__(self, arg2):
6168 r"""__eq__(LogEmbeddingKD self, LogEmbeddingKD arg2) -> bool"""
6169 return _IMP_algebra.LogEmbeddingKD___eq__(self, arg2)
6171 def _get_as_binary(self):
6172 r"""_get_as_binary(LogEmbeddingKD self) -> PyObject *"""
6173 return _IMP_algebra.LogEmbeddingKD__get_as_binary(self)
6175 def _set_from_binary(self, p):
6176 r"""_set_from_binary(LogEmbeddingKD self, PyObject * p)"""
6177 return _IMP_algebra.LogEmbeddingKD__set_from_binary(self, p)
6179 def __getstate__(self):
6180 p = self._get_as_binary()
6181 if len(self.__dict__) > 1:
6182 d = self.__dict__.copy()
6187 def __setstate__(self, p):
6188 if not hasattr(self,
'this'):
6190 if isinstance(p, tuple):
6192 self.__dict__.update(d)
6193 return self._set_from_binary(p)
6195 __swig_destroy__ = _IMP_algebra.delete_LogEmbeddingKD
6198 _IMP_algebra.LogEmbeddingKD_swigregister(LogEmbeddingKD)
6199 class DenseFloatLogGridKD(object):
6200 r"""Proxy of C++ IMP::algebra::DenseFloatLogGridKD class."""
6202 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6204 def __init__(self, sz, le):
6205 r"""__init__(DenseFloatLogGridKD self, IMP::Ints const & sz, LogEmbeddingKD le) -> DenseFloatLogGridKD"""
6206 _IMP_algebra.DenseFloatLogGridKD_swiginit(self, _IMP_algebra.new_DenseFloatLogGridKD(sz, le))
6208 def add_voxel(self, i, q):
6209 r"""add_voxel(DenseFloatLogGridKD self, ExtendedGridIndexKD i, float const & q) -> GridIndexKD"""
6210 return _IMP_algebra.DenseFloatLogGridKD_add_voxel(self, i, q)
6212 def __getitem__(self, *args):
6214 __getitem__(DenseFloatLogGridKD self, GridIndexKD i) -> float
6215 __getitem__(DenseFloatLogGridKD self, VectorKD i) -> float
6217 return _IMP_algebra.DenseFloatLogGridKD___getitem__(self, *args)
6219 def __setitem__(self, *args):
6221 __setitem__(DenseFloatLogGridKD self, GridIndexKD i, float const & q)
6222 __setitem__(DenseFloatLogGridKD self, VectorKD i, float const & q)
6224 return _IMP_algebra.DenseFloatLogGridKD___setitem__(self, *args)
6226 def get_bounding_box(self, *args):
6228 get_bounding_box(DenseFloatLogGridKD self, ExtendedGridIndexKD v) -> BoundingBoxKD
6229 get_bounding_box(DenseFloatLogGridKD self) -> BoundingBoxKD
6231 return _IMP_algebra.DenseFloatLogGridKD_get_bounding_box(self, *args)
6235 get_indexes(DenseFloatLogGridKD self, BoundingBoxKD bb) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >
6236 get_indexes(DenseFloatLogGridKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >
6238 return _IMP_algebra.DenseFloatLogGridKD_get_indexes(self, *args)
6240 def get_all_indexes(self):
6241 r"""get_all_indexes(DenseFloatLogGridKD self) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >"""
6242 return _IMP_algebra.DenseFloatLogGridKD_get_all_indexes(self)
6244 def get_extended_indexes(self, *args):
6246 get_extended_indexes(DenseFloatLogGridKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 >,std::allocator< IMP::algebra::ExtendedGridIndexD< -1 > > >
6247 get_extended_indexes(DenseFloatLogGridKD self, BoundingBoxKD bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 >,std::allocator< IMP::algebra::ExtendedGridIndexD< -1 > > >
6249 return _IMP_algebra.DenseFloatLogGridKD_get_extended_indexes(self, *args)
6251 def get_center(self, *args):
6253 get_center(DenseFloatLogGridKD self, ExtendedGridIndexKD ei) -> VectorKD
6254 get_center(DenseFloatLogGridKD self, GridIndexKD ei) -> VectorKD
6256 return _IMP_algebra.DenseFloatLogGridKD_get_center(self, *args)
6258 def get_extended_index(self, v):
6259 r"""get_extended_index(DenseFloatLogGridKD self, VectorKD v) -> ExtendedGridIndexKD"""
6260 return _IMP_algebra.DenseFloatLogGridKD_get_extended_index(self, v)
6263 r"""get_index(DenseFloatLogGridKD self, ExtendedGridIndexKD v) -> GridIndexKD"""
6264 return _IMP_algebra.DenseFloatLogGridKD_get_index(self, v)
6266 def get_origin(self):
6267 r"""get_origin(DenseFloatLogGridKD self) -> VectorKD"""
6268 return _IMP_algebra.DenseFloatLogGridKD_get_origin(self)
6270 def get_dimension(self):
6271 r"""get_dimension(DenseFloatLogGridKD self) -> unsigned int"""
6272 return _IMP_algebra.DenseFloatLogGridKD_get_dimension(self)
6274 def get_unit_cell(self):
6275 r"""get_unit_cell(DenseFloatLogGridKD self) -> VectorKD"""
6276 return _IMP_algebra.DenseFloatLogGridKD_get_unit_cell(self)
6278 def get_has_index(self, v):
6279 r"""get_has_index(DenseFloatLogGridKD self, ExtendedGridIndexKD v) -> bool"""
6280 return _IMP_algebra.DenseFloatLogGridKD_get_has_index(self, v)
6283 r"""__str__(DenseFloatLogGridKD self) -> std::string"""
6284 return _IMP_algebra.DenseFloatLogGridKD___str__(self)
6287 r"""__repr__(DenseFloatLogGridKD self) -> std::string"""
6288 return _IMP_algebra.DenseFloatLogGridKD___repr__(self)
6290 def show(self, *args):
6291 r"""show(DenseFloatLogGridKD self, _ostream out=std::cout)"""
6292 return _IMP_algebra.DenseFloatLogGridKD_show(self, *args)
6293 __swig_destroy__ = _IMP_algebra.delete_DenseFloatLogGridKD
6296 _IMP_algebra.DenseFloatLogGridKD_swigregister(DenseFloatLogGridKD)
6297 class DenseIntLogGrid3D(object):
6298 r"""Proxy of C++ IMP::algebra::DenseIntLogGrid3D class."""
6300 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6302 def __init__(self, sz, le):
6303 r"""__init__(DenseIntLogGrid3D self, IMP::Ints const & sz, LogEmbedding3D le) -> DenseIntLogGrid3D"""
6304 _IMP_algebra.DenseIntLogGrid3D_swiginit(self, _IMP_algebra.new_DenseIntLogGrid3D(sz, le))
6306 def add_voxel(self, i, q):
6307 r"""add_voxel(DenseIntLogGrid3D self, ExtendedGridIndex3D i, int const & q) -> GridIndex3D"""
6308 return _IMP_algebra.DenseIntLogGrid3D_add_voxel(self, i, q)
6310 def __getitem__(self, *args):
6312 __getitem__(DenseIntLogGrid3D self, GridIndex3D i) -> int
6313 __getitem__(DenseIntLogGrid3D self, Vector3D i) -> int
6315 return _IMP_algebra.DenseIntLogGrid3D___getitem__(self, *args)
6317 def __setitem__(self, *args):
6319 __setitem__(DenseIntLogGrid3D self, GridIndex3D i, int const & q)
6320 __setitem__(DenseIntLogGrid3D self, Vector3D i, int const & q)
6322 return _IMP_algebra.DenseIntLogGrid3D___setitem__(self, *args)
6324 def get_bounding_box(self, *args):
6326 get_bounding_box(DenseIntLogGrid3D self, ExtendedGridIndex3D v) -> BoundingBox3D
6327 get_bounding_box(DenseIntLogGrid3D self) -> BoundingBox3D
6329 return _IMP_algebra.DenseIntLogGrid3D_get_bounding_box(self, *args)
6333 get_indexes(DenseIntLogGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
6334 get_indexes(DenseIntLogGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
6336 return _IMP_algebra.DenseIntLogGrid3D_get_indexes(self, *args)
6338 def get_all_indexes(self):
6339 r"""get_all_indexes(DenseIntLogGrid3D self) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >"""
6340 return _IMP_algebra.DenseIntLogGrid3D_get_all_indexes(self)
6342 def get_extended_indexes(self, *args):
6344 get_extended_indexes(DenseIntLogGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
6345 get_extended_indexes(DenseIntLogGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
6347 return _IMP_algebra.DenseIntLogGrid3D_get_extended_indexes(self, *args)
6349 def get_center(self, *args):
6351 get_center(DenseIntLogGrid3D self, ExtendedGridIndex3D ei) -> Vector3D
6352 get_center(DenseIntLogGrid3D self, GridIndex3D ei) -> Vector3D
6354 return _IMP_algebra.DenseIntLogGrid3D_get_center(self, *args)
6356 def get_extended_index(self, v):
6357 r"""get_extended_index(DenseIntLogGrid3D self, Vector3D v) -> ExtendedGridIndex3D"""
6358 return _IMP_algebra.DenseIntLogGrid3D_get_extended_index(self, v)
6361 r"""get_index(DenseIntLogGrid3D self, ExtendedGridIndex3D v) -> GridIndex3D"""
6362 return _IMP_algebra.DenseIntLogGrid3D_get_index(self, v)
6364 def get_origin(self):
6365 r"""get_origin(DenseIntLogGrid3D self) -> Vector3D"""
6366 return _IMP_algebra.DenseIntLogGrid3D_get_origin(self)
6368 def get_dimension(self):
6369 r"""get_dimension(DenseIntLogGrid3D self) -> unsigned int"""
6370 return _IMP_algebra.DenseIntLogGrid3D_get_dimension(self)
6372 def get_unit_cell(self):
6373 r"""get_unit_cell(DenseIntLogGrid3D self) -> Vector3D"""
6374 return _IMP_algebra.DenseIntLogGrid3D_get_unit_cell(self)
6376 def get_has_index(self, v):
6377 r"""get_has_index(DenseIntLogGrid3D self, ExtendedGridIndex3D v) -> bool"""
6378 return _IMP_algebra.DenseIntLogGrid3D_get_has_index(self, v)
6381 r"""__str__(DenseIntLogGrid3D self) -> std::string"""
6382 return _IMP_algebra.DenseIntLogGrid3D___str__(self)
6385 r"""__repr__(DenseIntLogGrid3D self) -> std::string"""
6386 return _IMP_algebra.DenseIntLogGrid3D___repr__(self)
6388 def show(self, *args):
6389 r"""show(DenseIntLogGrid3D self, _ostream out=std::cout)"""
6390 return _IMP_algebra.DenseIntLogGrid3D_show(self, *args)
6391 __swig_destroy__ = _IMP_algebra.delete_DenseIntLogGrid3D
6394 _IMP_algebra.DenseIntLogGrid3D_swigregister(DenseIntLogGrid3D)
6396 r"""Proxy of C++ IMP::algebra::DenseGrid3D< double > class."""
6398 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6400 def __init__(self, *args):
6402 __init__(DenseDoubleGrid3D self, double side, BoundingBox3D bb, double _def=double()) -> DenseDoubleGrid3D
6403 __init__(DenseDoubleGrid3D self) -> DenseDoubleGrid3D
6405 _IMP_algebra.DenseDoubleGrid3D_swiginit(self, _IMP_algebra.new_DenseDoubleGrid3D(*args))
6407 def add_voxel(self, i, q):
6408 r"""add_voxel(DenseDoubleGrid3D self, ExtendedGridIndex3D i, double const & q) -> GridIndex3D"""
6409 return _IMP_algebra.DenseDoubleGrid3D_add_voxel(self, i, q)
6411 def __getitem__(self, *args):
6413 __getitem__(DenseDoubleGrid3D self, GridIndex3D i) -> double
6414 __getitem__(DenseDoubleGrid3D self, Vector3D i) -> double
6416 return _IMP_algebra.DenseDoubleGrid3D___getitem__(self, *args)
6418 def __setitem__(self, *args):
6420 __setitem__(DenseDoubleGrid3D self, GridIndex3D i, double const & q)
6421 __setitem__(DenseDoubleGrid3D self, Vector3D i, double const & q)
6423 return _IMP_algebra.DenseDoubleGrid3D___setitem__(self, *args)
6425 def get_bounding_box(self, *args):
6427 get_bounding_box(DenseDoubleGrid3D self, ExtendedGridIndex3D v) -> BoundingBox3D
6428 get_bounding_box(DenseDoubleGrid3D self) -> BoundingBox3D
6430 return _IMP_algebra.DenseDoubleGrid3D_get_bounding_box(self, *args)
6434 get_indexes(DenseDoubleGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
6435 get_indexes(DenseDoubleGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
6437 return _IMP_algebra.DenseDoubleGrid3D_get_indexes(self, *args)
6439 def get_all_indexes(self):
6440 r"""get_all_indexes(DenseDoubleGrid3D self) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >"""
6441 return _IMP_algebra.DenseDoubleGrid3D_get_all_indexes(self)
6443 def get_extended_indexes(self, *args):
6445 get_extended_indexes(DenseDoubleGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
6446 get_extended_indexes(DenseDoubleGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
6448 return _IMP_algebra.DenseDoubleGrid3D_get_extended_indexes(self, *args)
6450 def get_center(self, *args):
6452 get_center(DenseDoubleGrid3D self, ExtendedGridIndex3D ei) -> Vector3D
6453 get_center(DenseDoubleGrid3D self, GridIndex3D ei) -> Vector3D
6455 return _IMP_algebra.DenseDoubleGrid3D_get_center(self, *args)
6457 def get_extended_index(self, v):
6458 r"""get_extended_index(DenseDoubleGrid3D self, Vector3D v) -> ExtendedGridIndex3D"""
6459 return _IMP_algebra.DenseDoubleGrid3D_get_extended_index(self, v)
6462 r"""get_index(DenseDoubleGrid3D self, ExtendedGridIndex3D v) -> GridIndex3D"""
6463 return _IMP_algebra.DenseDoubleGrid3D_get_index(self, v)
6465 def get_origin(self):
6466 r"""get_origin(DenseDoubleGrid3D self) -> Vector3D"""
6467 return _IMP_algebra.DenseDoubleGrid3D_get_origin(self)
6469 def get_dimension(self):
6470 r"""get_dimension(DenseDoubleGrid3D self) -> unsigned int"""
6471 return _IMP_algebra.DenseDoubleGrid3D_get_dimension(self)
6473 def get_unit_cell(self):
6474 r"""get_unit_cell(DenseDoubleGrid3D self) -> Vector3D"""
6475 return _IMP_algebra.DenseDoubleGrid3D_get_unit_cell(self)
6477 def get_has_index(self, v):
6478 r"""get_has_index(DenseDoubleGrid3D self, ExtendedGridIndex3D v) -> bool"""
6479 return _IMP_algebra.DenseDoubleGrid3D_get_has_index(self, v)
6482 r"""__str__(DenseDoubleGrid3D self) -> std::string"""
6483 return _IMP_algebra.DenseDoubleGrid3D___str__(self)
6486 r"""__repr__(DenseDoubleGrid3D self) -> std::string"""
6487 return _IMP_algebra.DenseDoubleGrid3D___repr__(self)
6489 def show(self, *args):
6490 r"""show(DenseDoubleGrid3D self, _ostream out=std::cout)"""
6491 return _IMP_algebra.DenseDoubleGrid3D_show(self, *args)
6492 __swig_destroy__ = _IMP_algebra.delete_DenseDoubleGrid3D
6495 _IMP_algebra.DenseDoubleGrid3D_swigregister(DenseDoubleGrid3D)
6497 r"""Proxy of C++ IMP::algebra::DenseGrid3D< float > class."""
6499 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6501 def __init__(self, *args):
6503 __init__(DenseFloatGrid3D self, double side, BoundingBox3D bb, float _def=float()) -> DenseFloatGrid3D
6504 __init__(DenseFloatGrid3D self) -> DenseFloatGrid3D
6506 _IMP_algebra.DenseFloatGrid3D_swiginit(self, _IMP_algebra.new_DenseFloatGrid3D(*args))
6508 def add_voxel(self, i, q):
6509 r"""add_voxel(DenseFloatGrid3D self, ExtendedGridIndex3D i, float const & q) -> GridIndex3D"""
6510 return _IMP_algebra.DenseFloatGrid3D_add_voxel(self, i, q)
6512 def __getitem__(self, *args):
6514 __getitem__(DenseFloatGrid3D self, GridIndex3D i) -> float
6515 __getitem__(DenseFloatGrid3D self, Vector3D i) -> float
6517 return _IMP_algebra.DenseFloatGrid3D___getitem__(self, *args)
6519 def __setitem__(self, *args):
6521 __setitem__(DenseFloatGrid3D self, GridIndex3D i, float const & q)
6522 __setitem__(DenseFloatGrid3D self, Vector3D i, float const & q)
6524 return _IMP_algebra.DenseFloatGrid3D___setitem__(self, *args)
6526 def get_bounding_box(self, *args):
6528 get_bounding_box(DenseFloatGrid3D self, ExtendedGridIndex3D v) -> BoundingBox3D
6529 get_bounding_box(DenseFloatGrid3D self) -> BoundingBox3D
6531 return _IMP_algebra.DenseFloatGrid3D_get_bounding_box(self, *args)
6535 get_indexes(DenseFloatGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
6536 get_indexes(DenseFloatGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
6538 return _IMP_algebra.DenseFloatGrid3D_get_indexes(self, *args)
6540 def get_all_indexes(self):
6541 r"""get_all_indexes(DenseFloatGrid3D self) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >"""
6542 return _IMP_algebra.DenseFloatGrid3D_get_all_indexes(self)
6544 def get_extended_indexes(self, *args):
6546 get_extended_indexes(DenseFloatGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
6547 get_extended_indexes(DenseFloatGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
6549 return _IMP_algebra.DenseFloatGrid3D_get_extended_indexes(self, *args)
6551 def get_center(self, *args):
6553 get_center(DenseFloatGrid3D self, ExtendedGridIndex3D ei) -> Vector3D
6554 get_center(DenseFloatGrid3D self, GridIndex3D ei) -> Vector3D
6556 return _IMP_algebra.DenseFloatGrid3D_get_center(self, *args)
6558 def get_extended_index(self, v):
6559 r"""get_extended_index(DenseFloatGrid3D self, Vector3D v) -> ExtendedGridIndex3D"""
6560 return _IMP_algebra.DenseFloatGrid3D_get_extended_index(self, v)
6563 r"""get_index(DenseFloatGrid3D self, ExtendedGridIndex3D v) -> GridIndex3D"""
6564 return _IMP_algebra.DenseFloatGrid3D_get_index(self, v)
6566 def get_origin(self):
6567 r"""get_origin(DenseFloatGrid3D self) -> Vector3D"""
6568 return _IMP_algebra.DenseFloatGrid3D_get_origin(self)
6570 def get_dimension(self):
6571 r"""get_dimension(DenseFloatGrid3D self) -> unsigned int"""
6572 return _IMP_algebra.DenseFloatGrid3D_get_dimension(self)
6574 def get_unit_cell(self):
6575 r"""get_unit_cell(DenseFloatGrid3D self) -> Vector3D"""
6576 return _IMP_algebra.DenseFloatGrid3D_get_unit_cell(self)
6578 def get_has_index(self, v):
6579 r"""get_has_index(DenseFloatGrid3D self, ExtendedGridIndex3D v) -> bool"""
6580 return _IMP_algebra.DenseFloatGrid3D_get_has_index(self, v)
6583 r"""__str__(DenseFloatGrid3D self) -> std::string"""
6584 return _IMP_algebra.DenseFloatGrid3D___str__(self)
6587 r"""__repr__(DenseFloatGrid3D self) -> std::string"""
6588 return _IMP_algebra.DenseFloatGrid3D___repr__(self)
6590 def show(self, *args):
6591 r"""show(DenseFloatGrid3D self, _ostream out=std::cout)"""
6592 return _IMP_algebra.DenseFloatGrid3D_show(self, *args)
6593 __swig_destroy__ = _IMP_algebra.delete_DenseFloatGrid3D
6596 _IMP_algebra.DenseFloatGrid3D_swigregister(DenseFloatGrid3D)
6598 r"""Proxy of C++ IMP::algebra::SparseUnboundedGrid3D< int > class."""
6600 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6602 def __init__(self, *args):
6604 __init__(SparseUnboundedIntGrid3D self, double side, Vector3D origin, int _def=int()) -> SparseUnboundedIntGrid3D
6605 __init__(SparseUnboundedIntGrid3D self, Vector3D sides, Vector3D origin, int _def=int()) -> SparseUnboundedIntGrid3D
6606 __init__(SparseUnboundedIntGrid3D self) -> SparseUnboundedIntGrid3D
6608 _IMP_algebra.SparseUnboundedIntGrid3D_swiginit(self, _IMP_algebra.new_SparseUnboundedIntGrid3D(*args))
6610 def add_voxel(self, i, q):
6611 r"""add_voxel(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D i, int const & q) -> GridIndex3D"""
6612 return _IMP_algebra.SparseUnboundedIntGrid3D_add_voxel(self, i, q)
6614 def __getitem__(self, *args):
6616 __getitem__(SparseUnboundedIntGrid3D self, GridIndex3D i) -> int
6617 __getitem__(SparseUnboundedIntGrid3D self, Vector3D i) -> int
6619 return _IMP_algebra.SparseUnboundedIntGrid3D___getitem__(self, *args)
6621 def __setitem__(self, *args):
6623 __setitem__(SparseUnboundedIntGrid3D self, GridIndex3D i, int const & q)
6624 __setitem__(SparseUnboundedIntGrid3D self, Vector3D i, int const & q)
6626 return _IMP_algebra.SparseUnboundedIntGrid3D___setitem__(self, *args)
6628 def get_bounding_box(self, *args):
6630 get_bounding_box(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D v) -> BoundingBox3D
6631 get_bounding_box(SparseUnboundedIntGrid3D self) -> BoundingBox3D
6633 return _IMP_algebra.SparseUnboundedIntGrid3D_get_bounding_box(self, *args)
6637 get_indexes(SparseUnboundedIntGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
6638 get_indexes(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
6640 return _IMP_algebra.SparseUnboundedIntGrid3D_get_indexes(self, *args)
6642 def get_all_indexes(self):
6643 r"""get_all_indexes(SparseUnboundedIntGrid3D self) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >"""
6644 return _IMP_algebra.SparseUnboundedIntGrid3D_get_all_indexes(self)
6646 def get_extended_indexes(self, *args):
6648 get_extended_indexes(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
6649 get_extended_indexes(SparseUnboundedIntGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
6651 return _IMP_algebra.SparseUnboundedIntGrid3D_get_extended_indexes(self, *args)
6653 def get_center(self, *args):
6655 get_center(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D ei) -> Vector3D
6656 get_center(SparseUnboundedIntGrid3D self, GridIndex3D ei) -> Vector3D
6658 return _IMP_algebra.SparseUnboundedIntGrid3D_get_center(self, *args)
6660 def get_extended_index(self, v):
6661 r"""get_extended_index(SparseUnboundedIntGrid3D self, Vector3D v) -> ExtendedGridIndex3D"""
6662 return _IMP_algebra.SparseUnboundedIntGrid3D_get_extended_index(self, v)
6665 r"""get_index(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D v) -> GridIndex3D"""
6666 return _IMP_algebra.SparseUnboundedIntGrid3D_get_index(self, v)
6668 def get_origin(self):
6669 r"""get_origin(SparseUnboundedIntGrid3D self) -> Vector3D"""
6670 return _IMP_algebra.SparseUnboundedIntGrid3D_get_origin(self)
6672 def get_dimension(self):
6673 r"""get_dimension(SparseUnboundedIntGrid3D self) -> unsigned int"""
6674 return _IMP_algebra.SparseUnboundedIntGrid3D_get_dimension(self)
6676 def get_unit_cell(self):
6677 r"""get_unit_cell(SparseUnboundedIntGrid3D self) -> Vector3D"""
6678 return _IMP_algebra.SparseUnboundedIntGrid3D_get_unit_cell(self)
6680 def get_has_index(self, v):
6681 r"""get_has_index(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D v) -> bool"""
6682 return _IMP_algebra.SparseUnboundedIntGrid3D_get_has_index(self, v)
6685 r"""__str__(SparseUnboundedIntGrid3D self) -> std::string"""
6686 return _IMP_algebra.SparseUnboundedIntGrid3D___str__(self)
6689 r"""__repr__(SparseUnboundedIntGrid3D self) -> std::string"""
6690 return _IMP_algebra.SparseUnboundedIntGrid3D___repr__(self)
6692 def show(self, *args):
6693 r"""show(SparseUnboundedIntGrid3D self, _ostream out=std::cout)"""
6694 return _IMP_algebra.SparseUnboundedIntGrid3D_show(self, *args)
6695 __swig_destroy__ = _IMP_algebra.delete_SparseUnboundedIntGrid3D
6698 _IMP_algebra.SparseUnboundedIntGrid3D_swigregister(SparseUnboundedIntGrid3D)
6699 class SparseUnboundedIntGridKD(object):
6700 r"""Proxy of C++ IMP::algebra::SparseUnboundedGridD< -1,int > class."""
6702 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6704 def __init__(self, *args):
6706 __init__(SparseUnboundedIntGridKD self, double side, VectorKD origin, int _def=int()) -> SparseUnboundedIntGridKD
6707 __init__(SparseUnboundedIntGridKD self) -> SparseUnboundedIntGridKD
6709 _IMP_algebra.SparseUnboundedIntGridKD_swiginit(self, _IMP_algebra.new_SparseUnboundedIntGridKD(*args))
6711 def add_voxel(self, i, q):
6712 r"""add_voxel(SparseUnboundedIntGridKD self, ExtendedGridIndexKD i, int const & q) -> GridIndexKD"""
6713 return _IMP_algebra.SparseUnboundedIntGridKD_add_voxel(self, i, q)
6715 def __getitem__(self, *args):
6717 __getitem__(SparseUnboundedIntGridKD self, GridIndexKD i) -> int
6718 __getitem__(SparseUnboundedIntGridKD self, VectorKD i) -> int
6720 return _IMP_algebra.SparseUnboundedIntGridKD___getitem__(self, *args)
6722 def __setitem__(self, *args):
6724 __setitem__(SparseUnboundedIntGridKD self, GridIndexKD i, int const & q)
6725 __setitem__(SparseUnboundedIntGridKD self, VectorKD i, int const & q)
6727 return _IMP_algebra.SparseUnboundedIntGridKD___setitem__(self, *args)
6729 def get_bounding_box(self, *args):
6731 get_bounding_box(SparseUnboundedIntGridKD self, ExtendedGridIndexKD v) -> BoundingBoxKD
6732 get_bounding_box(SparseUnboundedIntGridKD self) -> BoundingBoxKD
6734 return _IMP_algebra.SparseUnboundedIntGridKD_get_bounding_box(self, *args)
6738 get_indexes(SparseUnboundedIntGridKD self, BoundingBoxKD bb) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >
6739 get_indexes(SparseUnboundedIntGridKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >
6741 return _IMP_algebra.SparseUnboundedIntGridKD_get_indexes(self, *args)
6743 def get_all_indexes(self):
6744 r"""get_all_indexes(SparseUnboundedIntGridKD self) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >"""
6745 return _IMP_algebra.SparseUnboundedIntGridKD_get_all_indexes(self)
6747 def get_extended_indexes(self, *args):
6749 get_extended_indexes(SparseUnboundedIntGridKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 >,std::allocator< IMP::algebra::ExtendedGridIndexD< -1 > > >
6750 get_extended_indexes(SparseUnboundedIntGridKD self, BoundingBoxKD bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 >,std::allocator< IMP::algebra::ExtendedGridIndexD< -1 > > >
6752 return _IMP_algebra.SparseUnboundedIntGridKD_get_extended_indexes(self, *args)
6754 def get_center(self, *args):
6756 get_center(SparseUnboundedIntGridKD self, ExtendedGridIndexKD ei) -> VectorKD
6757 get_center(SparseUnboundedIntGridKD self, GridIndexKD ei) -> VectorKD
6759 return _IMP_algebra.SparseUnboundedIntGridKD_get_center(self, *args)
6761 def get_extended_index(self, v):
6762 r"""get_extended_index(SparseUnboundedIntGridKD self, VectorKD v) -> ExtendedGridIndexKD"""
6763 return _IMP_algebra.SparseUnboundedIntGridKD_get_extended_index(self, v)
6766 r"""get_index(SparseUnboundedIntGridKD self, ExtendedGridIndexKD v) -> GridIndexKD"""
6767 return _IMP_algebra.SparseUnboundedIntGridKD_get_index(self, v)
6769 def get_origin(self):
6770 r"""get_origin(SparseUnboundedIntGridKD self) -> VectorKD"""
6771 return _IMP_algebra.SparseUnboundedIntGridKD_get_origin(self)
6773 def get_dimension(self):
6774 r"""get_dimension(SparseUnboundedIntGridKD self) -> unsigned int"""
6775 return _IMP_algebra.SparseUnboundedIntGridKD_get_dimension(self)
6777 def get_unit_cell(self):
6778 r"""get_unit_cell(SparseUnboundedIntGridKD self) -> VectorKD"""
6779 return _IMP_algebra.SparseUnboundedIntGridKD_get_unit_cell(self)
6781 def get_has_index(self, v):
6782 r"""get_has_index(SparseUnboundedIntGridKD self, ExtendedGridIndexKD v) -> bool"""
6783 return _IMP_algebra.SparseUnboundedIntGridKD_get_has_index(self, v)
6786 r"""__str__(SparseUnboundedIntGridKD self) -> std::string"""
6787 return _IMP_algebra.SparseUnboundedIntGridKD___str__(self)
6790 r"""__repr__(SparseUnboundedIntGridKD self) -> std::string"""
6791 return _IMP_algebra.SparseUnboundedIntGridKD___repr__(self)
6793 def show(self, *args):
6794 r"""show(SparseUnboundedIntGridKD self, _ostream out=std::cout)"""
6795 return _IMP_algebra.SparseUnboundedIntGridKD_show(self, *args)
6796 __swig_destroy__ = _IMP_algebra.delete_SparseUnboundedIntGridKD
6799 _IMP_algebra.SparseUnboundedIntGridKD_swigregister(SparseUnboundedIntGridKD)
6800 class GridIndex1D(IMP._Value):
6801 r"""Proxy of C++ IMP::algebra::GridIndexD< 1 > class."""
6803 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6805 def __init__(self, *args):
6807 __init__(GridIndex1D self) -> GridIndex1D
6808 __init__(GridIndex1D self, int x) -> GridIndex1D
6809 __init__(GridIndex1D self, int x, int y) -> GridIndex1D
6810 __init__(GridIndex1D self, int x, int y, int z) -> GridIndex1D
6811 __init__(GridIndex1D self, int i, int j, int k, int l) -> GridIndex1D
6812 __init__(GridIndex1D self, int i, int j, int k, int l, int m) -> GridIndex1D
6813 __init__(GridIndex1D self, int i, int j, int k, int l, int m, int n) -> GridIndex1D
6815 _IMP_algebra.GridIndex1D_swiginit(self, _IMP_algebra.new_GridIndex1D(*args))
6817 def get_dimension(self):
6818 r"""get_dimension(GridIndex1D self) -> unsigned int"""
6819 return _IMP_algebra.GridIndex1D_get_dimension(self)
6821 def __getitem__(self, i):
6822 r"""__getitem__(GridIndex1D self, unsigned int i) -> int const &"""
6823 return _IMP_algebra.GridIndex1D___getitem__(self, i)
6825 def show(self, *args):
6826 r"""show(GridIndex1D self, _ostream out=std::cout)"""
6827 return _IMP_algebra.GridIndex1D_show(self, *args)
6830 r"""__len__(GridIndex1D self) -> unsigned int"""
6831 return _IMP_algebra.GridIndex1D___len__(self)
6833 def __cmp__(self, o):
6834 r"""__cmp__(GridIndex1D self, GridIndex1D o) -> int"""
6835 return _IMP_algebra.GridIndex1D___cmp__(self, o)
6837 def __eq__(self, o):
6838 r"""__eq__(GridIndex1D self, GridIndex1D o) -> bool"""
6839 return _IMP_algebra.GridIndex1D___eq__(self, o)
6841 def __ne__(self, o):
6842 r"""__ne__(GridIndex1D self, GridIndex1D o) -> bool"""
6843 return _IMP_algebra.GridIndex1D___ne__(self, o)
6845 def __lt__(self, o):
6846 r"""__lt__(GridIndex1D self, GridIndex1D o) -> bool"""
6847 return _IMP_algebra.GridIndex1D___lt__(self, o)
6849 def __gt__(self, o):
6850 r"""__gt__(GridIndex1D self, GridIndex1D o) -> bool"""
6851 return _IMP_algebra.GridIndex1D___gt__(self, o)
6853 def __ge__(self, o):
6854 r"""__ge__(GridIndex1D self, GridIndex1D o) -> bool"""
6855 return _IMP_algebra.GridIndex1D___ge__(self, o)
6857 def __le__(self, o):
6858 r"""__le__(GridIndex1D self, GridIndex1D o) -> bool"""
6859 return _IMP_algebra.GridIndex1D___le__(self, o)
6862 r"""__hash__(GridIndex1D self) -> std::size_t"""
6863 return _IMP_algebra.GridIndex1D___hash__(self)
6866 r"""__str__(GridIndex1D self) -> std::string"""
6867 return _IMP_algebra.GridIndex1D___str__(self)
6870 r"""__repr__(GridIndex1D self) -> std::string"""
6871 return _IMP_algebra.GridIndex1D___repr__(self)
6873 def _get_as_binary(self):
6874 r"""_get_as_binary(GridIndex1D self) -> PyObject *"""
6875 return _IMP_algebra.GridIndex1D__get_as_binary(self)
6877 def _set_from_binary(self, p):
6878 r"""_set_from_binary(GridIndex1D self, PyObject * p)"""
6879 return _IMP_algebra.GridIndex1D__set_from_binary(self, p)
6881 def __getstate__(self):
6882 p = self._get_as_binary()
6883 if len(self.__dict__) > 1:
6884 d = self.__dict__.copy()
6889 def __setstate__(self, p):
6890 if not hasattr(self,
'this'):
6892 if isinstance(p, tuple):
6894 self.__dict__.update(d)
6895 return self._set_from_binary(p)
6897 __swig_destroy__ = _IMP_algebra.delete_GridIndex1D
6900 _IMP_algebra.GridIndex1D_swigregister(GridIndex1D)
6901 class GridIndex2D(IMP._Value):
6902 r"""Proxy of C++ IMP::algebra::GridIndexD< 2 > class."""
6904 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6906 def __init__(self, *args):
6908 __init__(GridIndex2D self) -> GridIndex2D
6909 __init__(GridIndex2D self, int x) -> GridIndex2D
6910 __init__(GridIndex2D self, int x, int y) -> GridIndex2D
6911 __init__(GridIndex2D self, int x, int y, int z) -> GridIndex2D
6912 __init__(GridIndex2D self, int i, int j, int k, int l) -> GridIndex2D
6913 __init__(GridIndex2D self, int i, int j, int k, int l, int m) -> GridIndex2D
6914 __init__(GridIndex2D self, int i, int j, int k, int l, int m, int n) -> GridIndex2D
6916 _IMP_algebra.GridIndex2D_swiginit(self, _IMP_algebra.new_GridIndex2D(*args))
6918 def get_dimension(self):
6919 r"""get_dimension(GridIndex2D self) -> unsigned int"""
6920 return _IMP_algebra.GridIndex2D_get_dimension(self)
6922 def __getitem__(self, i):
6923 r"""__getitem__(GridIndex2D self, unsigned int i) -> int const &"""
6924 return _IMP_algebra.GridIndex2D___getitem__(self, i)
6926 def show(self, *args):
6927 r"""show(GridIndex2D self, _ostream out=std::cout)"""
6928 return _IMP_algebra.GridIndex2D_show(self, *args)
6931 r"""__len__(GridIndex2D self) -> unsigned int"""
6932 return _IMP_algebra.GridIndex2D___len__(self)
6934 def __cmp__(self, o):
6935 r"""__cmp__(GridIndex2D self, GridIndex2D o) -> int"""
6936 return _IMP_algebra.GridIndex2D___cmp__(self, o)
6938 def __eq__(self, o):
6939 r"""__eq__(GridIndex2D self, GridIndex2D o) -> bool"""
6940 return _IMP_algebra.GridIndex2D___eq__(self, o)
6942 def __ne__(self, o):
6943 r"""__ne__(GridIndex2D self, GridIndex2D o) -> bool"""
6944 return _IMP_algebra.GridIndex2D___ne__(self, o)
6946 def __lt__(self, o):
6947 r"""__lt__(GridIndex2D self, GridIndex2D o) -> bool"""
6948 return _IMP_algebra.GridIndex2D___lt__(self, o)
6950 def __gt__(self, o):
6951 r"""__gt__(GridIndex2D self, GridIndex2D o) -> bool"""
6952 return _IMP_algebra.GridIndex2D___gt__(self, o)
6954 def __ge__(self, o):
6955 r"""__ge__(GridIndex2D self, GridIndex2D o) -> bool"""
6956 return _IMP_algebra.GridIndex2D___ge__(self, o)
6958 def __le__(self, o):
6959 r"""__le__(GridIndex2D self, GridIndex2D o) -> bool"""
6960 return _IMP_algebra.GridIndex2D___le__(self, o)
6963 r"""__hash__(GridIndex2D self) -> std::size_t"""
6964 return _IMP_algebra.GridIndex2D___hash__(self)
6967 r"""__str__(GridIndex2D self) -> std::string"""
6968 return _IMP_algebra.GridIndex2D___str__(self)
6971 r"""__repr__(GridIndex2D self) -> std::string"""
6972 return _IMP_algebra.GridIndex2D___repr__(self)
6974 def _get_as_binary(self):
6975 r"""_get_as_binary(GridIndex2D self) -> PyObject *"""
6976 return _IMP_algebra.GridIndex2D__get_as_binary(self)
6978 def _set_from_binary(self, p):
6979 r"""_set_from_binary(GridIndex2D self, PyObject * p)"""
6980 return _IMP_algebra.GridIndex2D__set_from_binary(self, p)
6982 def __getstate__(self):
6983 p = self._get_as_binary()
6984 if len(self.__dict__) > 1:
6985 d = self.__dict__.copy()
6990 def __setstate__(self, p):
6991 if not hasattr(self,
'this'):
6993 if isinstance(p, tuple):
6995 self.__dict__.update(d)
6996 return self._set_from_binary(p)
6998 __swig_destroy__ = _IMP_algebra.delete_GridIndex2D
7001 _IMP_algebra.GridIndex2D_swigregister(GridIndex2D)
7002 class GridIndex3D(IMP._Value):
7003 r"""Proxy of C++ IMP::algebra::GridIndexD< 3 > class."""
7005 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7007 def __init__(self, *args):
7009 __init__(GridIndex3D self) -> GridIndex3D
7010 __init__(GridIndex3D self, int x) -> GridIndex3D
7011 __init__(GridIndex3D self, int x, int y) -> GridIndex3D
7012 __init__(GridIndex3D self, int x, int y, int z) -> GridIndex3D
7013 __init__(GridIndex3D self, int i, int j, int k, int l) -> GridIndex3D
7014 __init__(GridIndex3D self, int i, int j, int k, int l, int m) -> GridIndex3D
7015 __init__(GridIndex3D self, int i, int j, int k, int l, int m, int n) -> GridIndex3D
7017 _IMP_algebra.GridIndex3D_swiginit(self, _IMP_algebra.new_GridIndex3D(*args))
7019 def get_dimension(self):
7020 r"""get_dimension(GridIndex3D self) -> unsigned int"""
7021 return _IMP_algebra.GridIndex3D_get_dimension(self)
7023 def __getitem__(self, i):
7024 r"""__getitem__(GridIndex3D self, unsigned int i) -> int const &"""
7025 return _IMP_algebra.GridIndex3D___getitem__(self, i)
7027 def show(self, *args):
7028 r"""show(GridIndex3D self, _ostream out=std::cout)"""
7029 return _IMP_algebra.GridIndex3D_show(self, *args)
7032 r"""__len__(GridIndex3D self) -> unsigned int"""
7033 return _IMP_algebra.GridIndex3D___len__(self)
7035 def __cmp__(self, o):
7036 r"""__cmp__(GridIndex3D self, GridIndex3D o) -> int"""
7037 return _IMP_algebra.GridIndex3D___cmp__(self, o)
7039 def __eq__(self, o):
7040 r"""__eq__(GridIndex3D self, GridIndex3D o) -> bool"""
7041 return _IMP_algebra.GridIndex3D___eq__(self, o)
7043 def __ne__(self, o):
7044 r"""__ne__(GridIndex3D self, GridIndex3D o) -> bool"""
7045 return _IMP_algebra.GridIndex3D___ne__(self, o)
7047 def __lt__(self, o):
7048 r"""__lt__(GridIndex3D self, GridIndex3D o) -> bool"""
7049 return _IMP_algebra.GridIndex3D___lt__(self, o)
7051 def __gt__(self, o):
7052 r"""__gt__(GridIndex3D self, GridIndex3D o) -> bool"""
7053 return _IMP_algebra.GridIndex3D___gt__(self, o)
7055 def __ge__(self, o):
7056 r"""__ge__(GridIndex3D self, GridIndex3D o) -> bool"""
7057 return _IMP_algebra.GridIndex3D___ge__(self, o)
7059 def __le__(self, o):
7060 r"""__le__(GridIndex3D self, GridIndex3D o) -> bool"""
7061 return _IMP_algebra.GridIndex3D___le__(self, o)
7064 r"""__hash__(GridIndex3D self) -> std::size_t"""
7065 return _IMP_algebra.GridIndex3D___hash__(self)
7068 r"""__str__(GridIndex3D self) -> std::string"""
7069 return _IMP_algebra.GridIndex3D___str__(self)
7072 r"""__repr__(GridIndex3D self) -> std::string"""
7073 return _IMP_algebra.GridIndex3D___repr__(self)
7075 def _get_as_binary(self):
7076 r"""_get_as_binary(GridIndex3D self) -> PyObject *"""
7077 return _IMP_algebra.GridIndex3D__get_as_binary(self)
7079 def _set_from_binary(self, p):
7080 r"""_set_from_binary(GridIndex3D self, PyObject * p)"""
7081 return _IMP_algebra.GridIndex3D__set_from_binary(self, p)
7083 def __getstate__(self):
7084 p = self._get_as_binary()
7085 if len(self.__dict__) > 1:
7086 d = self.__dict__.copy()
7091 def __setstate__(self, p):
7092 if not hasattr(self,
'this'):
7094 if isinstance(p, tuple):
7096 self.__dict__.update(d)
7097 return self._set_from_binary(p)
7099 __swig_destroy__ = _IMP_algebra.delete_GridIndex3D
7102 _IMP_algebra.GridIndex3D_swigregister(GridIndex3D)
7103 class GridIndex4D(IMP._Value):
7104 r"""Proxy of C++ IMP::algebra::GridIndexD< 4 > class."""
7106 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7108 def __init__(self, *args):
7110 __init__(GridIndex4D self) -> GridIndex4D
7111 __init__(GridIndex4D self, int x) -> GridIndex4D
7112 __init__(GridIndex4D self, int x, int y) -> GridIndex4D
7113 __init__(GridIndex4D self, int x, int y, int z) -> GridIndex4D
7114 __init__(GridIndex4D self, int i, int j, int k, int l) -> GridIndex4D
7115 __init__(GridIndex4D self, int i, int j, int k, int l, int m) -> GridIndex4D
7116 __init__(GridIndex4D self, int i, int j, int k, int l, int m, int n) -> GridIndex4D
7118 _IMP_algebra.GridIndex4D_swiginit(self, _IMP_algebra.new_GridIndex4D(*args))
7120 def get_dimension(self):
7121 r"""get_dimension(GridIndex4D self) -> unsigned int"""
7122 return _IMP_algebra.GridIndex4D_get_dimension(self)
7124 def __getitem__(self, i):
7125 r"""__getitem__(GridIndex4D self, unsigned int i) -> int const &"""
7126 return _IMP_algebra.GridIndex4D___getitem__(self, i)
7128 def show(self, *args):
7129 r"""show(GridIndex4D self, _ostream out=std::cout)"""
7130 return _IMP_algebra.GridIndex4D_show(self, *args)
7133 r"""__len__(GridIndex4D self) -> unsigned int"""
7134 return _IMP_algebra.GridIndex4D___len__(self)
7136 def __cmp__(self, o):
7137 r"""__cmp__(GridIndex4D self, GridIndex4D o) -> int"""
7138 return _IMP_algebra.GridIndex4D___cmp__(self, o)
7140 def __eq__(self, o):
7141 r"""__eq__(GridIndex4D self, GridIndex4D o) -> bool"""
7142 return _IMP_algebra.GridIndex4D___eq__(self, o)
7144 def __ne__(self, o):
7145 r"""__ne__(GridIndex4D self, GridIndex4D o) -> bool"""
7146 return _IMP_algebra.GridIndex4D___ne__(self, o)
7148 def __lt__(self, o):
7149 r"""__lt__(GridIndex4D self, GridIndex4D o) -> bool"""
7150 return _IMP_algebra.GridIndex4D___lt__(self, o)
7152 def __gt__(self, o):
7153 r"""__gt__(GridIndex4D self, GridIndex4D o) -> bool"""
7154 return _IMP_algebra.GridIndex4D___gt__(self, o)
7156 def __ge__(self, o):
7157 r"""__ge__(GridIndex4D self, GridIndex4D o) -> bool"""
7158 return _IMP_algebra.GridIndex4D___ge__(self, o)
7160 def __le__(self, o):
7161 r"""__le__(GridIndex4D self, GridIndex4D o) -> bool"""
7162 return _IMP_algebra.GridIndex4D___le__(self, o)
7165 r"""__hash__(GridIndex4D self) -> std::size_t"""
7166 return _IMP_algebra.GridIndex4D___hash__(self)
7169 r"""__str__(GridIndex4D self) -> std::string"""
7170 return _IMP_algebra.GridIndex4D___str__(self)
7173 r"""__repr__(GridIndex4D self) -> std::string"""
7174 return _IMP_algebra.GridIndex4D___repr__(self)
7176 def _get_as_binary(self):
7177 r"""_get_as_binary(GridIndex4D self) -> PyObject *"""
7178 return _IMP_algebra.GridIndex4D__get_as_binary(self)
7180 def _set_from_binary(self, p):
7181 r"""_set_from_binary(GridIndex4D self, PyObject * p)"""
7182 return _IMP_algebra.GridIndex4D__set_from_binary(self, p)
7184 def __getstate__(self):
7185 p = self._get_as_binary()
7186 if len(self.__dict__) > 1:
7187 d = self.__dict__.copy()
7192 def __setstate__(self, p):
7193 if not hasattr(self,
'this'):
7195 if isinstance(p, tuple):
7197 self.__dict__.update(d)
7198 return self._set_from_binary(p)
7200 __swig_destroy__ = _IMP_algebra.delete_GridIndex4D
7203 _IMP_algebra.GridIndex4D_swigregister(GridIndex4D)
7204 class GridIndex5D(IMP._Value):
7205 r"""Proxy of C++ IMP::algebra::GridIndexD< 5 > class."""
7207 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7209 def __init__(self, *args):
7211 __init__(GridIndex5D self) -> GridIndex5D
7212 __init__(GridIndex5D self, int x) -> GridIndex5D
7213 __init__(GridIndex5D self, int x, int y) -> GridIndex5D
7214 __init__(GridIndex5D self, int x, int y, int z) -> GridIndex5D
7215 __init__(GridIndex5D self, int i, int j, int k, int l) -> GridIndex5D
7216 __init__(GridIndex5D self, int i, int j, int k, int l, int m) -> GridIndex5D
7217 __init__(GridIndex5D self, int i, int j, int k, int l, int m, int n) -> GridIndex5D
7219 _IMP_algebra.GridIndex5D_swiginit(self, _IMP_algebra.new_GridIndex5D(*args))
7221 def get_dimension(self):
7222 r"""get_dimension(GridIndex5D self) -> unsigned int"""
7223 return _IMP_algebra.GridIndex5D_get_dimension(self)
7225 def __getitem__(self, i):
7226 r"""__getitem__(GridIndex5D self, unsigned int i) -> int const &"""
7227 return _IMP_algebra.GridIndex5D___getitem__(self, i)
7229 def show(self, *args):
7230 r"""show(GridIndex5D self, _ostream out=std::cout)"""
7231 return _IMP_algebra.GridIndex5D_show(self, *args)
7234 r"""__len__(GridIndex5D self) -> unsigned int"""
7235 return _IMP_algebra.GridIndex5D___len__(self)
7237 def __cmp__(self, o):
7238 r"""__cmp__(GridIndex5D self, GridIndex5D o) -> int"""
7239 return _IMP_algebra.GridIndex5D___cmp__(self, o)
7241 def __eq__(self, o):
7242 r"""__eq__(GridIndex5D self, GridIndex5D o) -> bool"""
7243 return _IMP_algebra.GridIndex5D___eq__(self, o)
7245 def __ne__(self, o):
7246 r"""__ne__(GridIndex5D self, GridIndex5D o) -> bool"""
7247 return _IMP_algebra.GridIndex5D___ne__(self, o)
7249 def __lt__(self, o):
7250 r"""__lt__(GridIndex5D self, GridIndex5D o) -> bool"""
7251 return _IMP_algebra.GridIndex5D___lt__(self, o)
7253 def __gt__(self, o):
7254 r"""__gt__(GridIndex5D self, GridIndex5D o) -> bool"""
7255 return _IMP_algebra.GridIndex5D___gt__(self, o)
7257 def __ge__(self, o):
7258 r"""__ge__(GridIndex5D self, GridIndex5D o) -> bool"""
7259 return _IMP_algebra.GridIndex5D___ge__(self, o)
7261 def __le__(self, o):
7262 r"""__le__(GridIndex5D self, GridIndex5D o) -> bool"""
7263 return _IMP_algebra.GridIndex5D___le__(self, o)
7266 r"""__hash__(GridIndex5D self) -> std::size_t"""
7267 return _IMP_algebra.GridIndex5D___hash__(self)
7270 r"""__str__(GridIndex5D self) -> std::string"""
7271 return _IMP_algebra.GridIndex5D___str__(self)
7274 r"""__repr__(GridIndex5D self) -> std::string"""
7275 return _IMP_algebra.GridIndex5D___repr__(self)
7277 def _get_as_binary(self):
7278 r"""_get_as_binary(GridIndex5D self) -> PyObject *"""
7279 return _IMP_algebra.GridIndex5D__get_as_binary(self)
7281 def _set_from_binary(self, p):
7282 r"""_set_from_binary(GridIndex5D self, PyObject * p)"""
7283 return _IMP_algebra.GridIndex5D__set_from_binary(self, p)
7285 def __getstate__(self):
7286 p = self._get_as_binary()
7287 if len(self.__dict__) > 1:
7288 d = self.__dict__.copy()
7293 def __setstate__(self, p):
7294 if not hasattr(self,
'this'):
7296 if isinstance(p, tuple):
7298 self.__dict__.update(d)
7299 return self._set_from_binary(p)
7301 __swig_destroy__ = _IMP_algebra.delete_GridIndex5D
7304 _IMP_algebra.GridIndex5D_swigregister(GridIndex5D)
7305 class GridIndex6D(IMP._Value):
7306 r"""Proxy of C++ IMP::algebra::GridIndexD< 6 > class."""
7308 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7310 def __init__(self, *args):
7312 __init__(GridIndex6D self) -> GridIndex6D
7313 __init__(GridIndex6D self, int x) -> GridIndex6D
7314 __init__(GridIndex6D self, int x, int y) -> GridIndex6D
7315 __init__(GridIndex6D self, int x, int y, int z) -> GridIndex6D
7316 __init__(GridIndex6D self, int i, int j, int k, int l) -> GridIndex6D
7317 __init__(GridIndex6D self, int i, int j, int k, int l, int m) -> GridIndex6D
7318 __init__(GridIndex6D self, int i, int j, int k, int l, int m, int n) -> GridIndex6D
7320 _IMP_algebra.GridIndex6D_swiginit(self, _IMP_algebra.new_GridIndex6D(*args))
7322 def get_dimension(self):
7323 r"""get_dimension(GridIndex6D self) -> unsigned int"""
7324 return _IMP_algebra.GridIndex6D_get_dimension(self)
7326 def __getitem__(self, i):
7327 r"""__getitem__(GridIndex6D self, unsigned int i) -> int const &"""
7328 return _IMP_algebra.GridIndex6D___getitem__(self, i)
7330 def show(self, *args):
7331 r"""show(GridIndex6D self, _ostream out=std::cout)"""
7332 return _IMP_algebra.GridIndex6D_show(self, *args)
7335 r"""__len__(GridIndex6D self) -> unsigned int"""
7336 return _IMP_algebra.GridIndex6D___len__(self)
7338 def __cmp__(self, o):
7339 r"""__cmp__(GridIndex6D self, GridIndex6D o) -> int"""
7340 return _IMP_algebra.GridIndex6D___cmp__(self, o)
7342 def __eq__(self, o):
7343 r"""__eq__(GridIndex6D self, GridIndex6D o) -> bool"""
7344 return _IMP_algebra.GridIndex6D___eq__(self, o)
7346 def __ne__(self, o):
7347 r"""__ne__(GridIndex6D self, GridIndex6D o) -> bool"""
7348 return _IMP_algebra.GridIndex6D___ne__(self, o)
7350 def __lt__(self, o):
7351 r"""__lt__(GridIndex6D self, GridIndex6D o) -> bool"""
7352 return _IMP_algebra.GridIndex6D___lt__(self, o)
7354 def __gt__(self, o):
7355 r"""__gt__(GridIndex6D self, GridIndex6D o) -> bool"""
7356 return _IMP_algebra.GridIndex6D___gt__(self, o)
7358 def __ge__(self, o):
7359 r"""__ge__(GridIndex6D self, GridIndex6D o) -> bool"""
7360 return _IMP_algebra.GridIndex6D___ge__(self, o)
7362 def __le__(self, o):
7363 r"""__le__(GridIndex6D self, GridIndex6D o) -> bool"""
7364 return _IMP_algebra.GridIndex6D___le__(self, o)
7367 r"""__hash__(GridIndex6D self) -> std::size_t"""
7368 return _IMP_algebra.GridIndex6D___hash__(self)
7371 r"""__str__(GridIndex6D self) -> std::string"""
7372 return _IMP_algebra.GridIndex6D___str__(self)
7375 r"""__repr__(GridIndex6D self) -> std::string"""
7376 return _IMP_algebra.GridIndex6D___repr__(self)
7378 def _get_as_binary(self):
7379 r"""_get_as_binary(GridIndex6D self) -> PyObject *"""
7380 return _IMP_algebra.GridIndex6D__get_as_binary(self)
7382 def _set_from_binary(self, p):
7383 r"""_set_from_binary(GridIndex6D self, PyObject * p)"""
7384 return _IMP_algebra.GridIndex6D__set_from_binary(self, p)
7386 def __getstate__(self):
7387 p = self._get_as_binary()
7388 if len(self.__dict__) > 1:
7389 d = self.__dict__.copy()
7394 def __setstate__(self, p):
7395 if not hasattr(self,
'this'):
7397 if isinstance(p, tuple):
7399 self.__dict__.update(d)
7400 return self._set_from_binary(p)
7402 __swig_destroy__ = _IMP_algebra.delete_GridIndex6D
7405 _IMP_algebra.GridIndex6D_swigregister(GridIndex6D)
7406 class GridIndexKD(IMP._Value):
7407 r"""Proxy of C++ IMP::algebra::GridIndexD< -1 > class."""
7409 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7411 def __init__(self, *args):
7413 __init__(GridIndexKD self) -> GridIndexKD
7414 __init__(GridIndexKD self, int x) -> GridIndexKD
7415 __init__(GridIndexKD self, int x, int y) -> GridIndexKD
7416 __init__(GridIndexKD self, int x, int y, int z) -> GridIndexKD
7417 __init__(GridIndexKD self, int i, int j, int k, int l) -> GridIndexKD
7418 __init__(GridIndexKD self, int i, int j, int k, int l, int m) -> GridIndexKD
7419 __init__(GridIndexKD self, int i, int j, int k, int l, int m, int n) -> GridIndexKD
7421 _IMP_algebra.GridIndexKD_swiginit(self, _IMP_algebra.new_GridIndexKD(*args))
7423 def get_dimension(self):
7424 r"""get_dimension(GridIndexKD self) -> unsigned int"""
7425 return _IMP_algebra.GridIndexKD_get_dimension(self)
7427 def __getitem__(self, i):
7428 r"""__getitem__(GridIndexKD self, unsigned int i) -> int const &"""
7429 return _IMP_algebra.GridIndexKD___getitem__(self, i)
7431 def show(self, *args):
7432 r"""show(GridIndexKD self, _ostream out=std::cout)"""
7433 return _IMP_algebra.GridIndexKD_show(self, *args)
7436 r"""__len__(GridIndexKD self) -> unsigned int"""
7437 return _IMP_algebra.GridIndexKD___len__(self)
7439 def __cmp__(self, o):
7440 r"""__cmp__(GridIndexKD self, GridIndexKD o) -> int"""
7441 return _IMP_algebra.GridIndexKD___cmp__(self, o)
7443 def __eq__(self, o):
7444 r"""__eq__(GridIndexKD self, GridIndexKD o) -> bool"""
7445 return _IMP_algebra.GridIndexKD___eq__(self, o)
7447 def __ne__(self, o):
7448 r"""__ne__(GridIndexKD self, GridIndexKD o) -> bool"""
7449 return _IMP_algebra.GridIndexKD___ne__(self, o)
7451 def __lt__(self, o):
7452 r"""__lt__(GridIndexKD self, GridIndexKD o) -> bool"""
7453 return _IMP_algebra.GridIndexKD___lt__(self, o)
7455 def __gt__(self, o):
7456 r"""__gt__(GridIndexKD self, GridIndexKD o) -> bool"""
7457 return _IMP_algebra.GridIndexKD___gt__(self, o)
7459 def __ge__(self, o):
7460 r"""__ge__(GridIndexKD self, GridIndexKD o) -> bool"""
7461 return _IMP_algebra.GridIndexKD___ge__(self, o)
7463 def __le__(self, o):
7464 r"""__le__(GridIndexKD self, GridIndexKD o) -> bool"""
7465 return _IMP_algebra.GridIndexKD___le__(self, o)
7468 r"""__hash__(GridIndexKD self) -> std::size_t"""
7469 return _IMP_algebra.GridIndexKD___hash__(self)
7472 r"""__str__(GridIndexKD self) -> std::string"""
7473 return _IMP_algebra.GridIndexKD___str__(self)
7476 r"""__repr__(GridIndexKD self) -> std::string"""
7477 return _IMP_algebra.GridIndexKD___repr__(self)
7479 def _get_as_binary(self):
7480 r"""_get_as_binary(GridIndexKD self) -> PyObject *"""
7481 return _IMP_algebra.GridIndexKD__get_as_binary(self)
7483 def _set_from_binary(self, p):
7484 r"""_set_from_binary(GridIndexKD self, PyObject * p)"""
7485 return _IMP_algebra.GridIndexKD__set_from_binary(self, p)
7487 def __getstate__(self):
7488 p = self._get_as_binary()
7489 if len(self.__dict__) > 1:
7490 d = self.__dict__.copy()
7495 def __setstate__(self, p):
7496 if not hasattr(self,
'this'):
7498 if isinstance(p, tuple):
7500 self.__dict__.update(d)
7501 return self._set_from_binary(p)
7503 __swig_destroy__ = _IMP_algebra.delete_GridIndexKD
7506 _IMP_algebra.GridIndexKD_swigregister(GridIndexKD)
7507 class ExtendedGridIndex1D(IMP._Value):
7508 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 1 > class."""
7510 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7512 def __init__(self, *args):
7514 __init__(ExtendedGridIndex1D self, IMP::Ints vals) -> ExtendedGridIndex1D
7515 __init__(ExtendedGridIndex1D self, int x) -> ExtendedGridIndex1D
7516 __init__(ExtendedGridIndex1D self, int x, int y) -> ExtendedGridIndex1D
7517 __init__(ExtendedGridIndex1D self, int x, int y, int z) -> ExtendedGridIndex1D
7518 __init__(ExtendedGridIndex1D self, int i, int j, int k, int l) -> ExtendedGridIndex1D
7519 __init__(ExtendedGridIndex1D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex1D
7520 __init__(ExtendedGridIndex1D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex1D
7521 __init__(ExtendedGridIndex1D self) -> ExtendedGridIndex1D
7523 _IMP_algebra.ExtendedGridIndex1D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex1D(*args))
7525 def get_dimension(self):
7526 r"""get_dimension(ExtendedGridIndex1D self) -> unsigned int"""
7527 return _IMP_algebra.ExtendedGridIndex1D_get_dimension(self)
7529 def __cmp__(self, o):
7530 r"""__cmp__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> int"""
7531 return _IMP_algebra.ExtendedGridIndex1D___cmp__(self, o)
7533 def __eq__(self, o):
7534 r"""__eq__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
7535 return _IMP_algebra.ExtendedGridIndex1D___eq__(self, o)
7537 def __ne__(self, o):
7538 r"""__ne__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
7539 return _IMP_algebra.ExtendedGridIndex1D___ne__(self, o)
7541 def __lt__(self, o):
7542 r"""__lt__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
7543 return _IMP_algebra.ExtendedGridIndex1D___lt__(self, o)
7545 def __gt__(self, o):
7546 r"""__gt__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
7547 return _IMP_algebra.ExtendedGridIndex1D___gt__(self, o)
7549 def __ge__(self, o):
7550 r"""__ge__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
7551 return _IMP_algebra.ExtendedGridIndex1D___ge__(self, o)
7553 def __le__(self, o):
7554 r"""__le__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
7555 return _IMP_algebra.ExtendedGridIndex1D___le__(self, o)
7557 def __setitem__(self, i, v):
7558 r"""__setitem__(ExtendedGridIndex1D self, unsigned int i, int const & v)"""
7559 return _IMP_algebra.ExtendedGridIndex1D___setitem__(self, i, v)
7561 def __getitem__(self, i):
7562 r"""__getitem__(ExtendedGridIndex1D self, unsigned int i) -> int const &"""
7563 return _IMP_algebra.ExtendedGridIndex1D___getitem__(self, i)
7565 def show(self, *args):
7566 r"""show(ExtendedGridIndex1D self, _ostream out=std::cout)"""
7567 return _IMP_algebra.ExtendedGridIndex1D_show(self, *args)
7570 r"""__len__(ExtendedGridIndex1D self) -> unsigned int"""
7571 return _IMP_algebra.ExtendedGridIndex1D___len__(self)
7574 r"""__hash__(ExtendedGridIndex1D self) -> std::size_t"""
7575 return _IMP_algebra.ExtendedGridIndex1D___hash__(self)
7577 def get_uniform_offset(self, ii):
7578 r"""get_uniform_offset(ExtendedGridIndex1D self, int ii) -> ExtendedGridIndex1D"""
7579 return _IMP_algebra.ExtendedGridIndex1D_get_uniform_offset(self, ii)
7581 def get_offset(self, i, j, k):
7582 r"""get_offset(ExtendedGridIndex1D self, int i, int j, int k) -> ExtendedGridIndex1D"""
7583 return _IMP_algebra.ExtendedGridIndex1D_get_offset(self, i, j, k)
7586 r"""__str__(ExtendedGridIndex1D self) -> std::string"""
7587 return _IMP_algebra.ExtendedGridIndex1D___str__(self)
7590 r"""__repr__(ExtendedGridIndex1D self) -> std::string"""
7591 return _IMP_algebra.ExtendedGridIndex1D___repr__(self)
7593 def _get_as_binary(self):
7594 r"""_get_as_binary(ExtendedGridIndex1D self) -> PyObject *"""
7595 return _IMP_algebra.ExtendedGridIndex1D__get_as_binary(self)
7597 def _set_from_binary(self, p):
7598 r"""_set_from_binary(ExtendedGridIndex1D self, PyObject * p)"""
7599 return _IMP_algebra.ExtendedGridIndex1D__set_from_binary(self, p)
7601 def __getstate__(self):
7602 p = self._get_as_binary()
7603 if len(self.__dict__) > 1:
7604 d = self.__dict__.copy()
7609 def __setstate__(self, p):
7610 if not hasattr(self,
'this'):
7612 if isinstance(p, tuple):
7614 self.__dict__.update(d)
7615 return self._set_from_binary(p)
7617 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex1D
7620 _IMP_algebra.ExtendedGridIndex1D_swigregister(ExtendedGridIndex1D)
7621 class ExtendedGridIndex2D(IMP._Value):
7622 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 2 > class."""
7624 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7626 def __init__(self, *args):
7628 __init__(ExtendedGridIndex2D self, IMP::Ints vals) -> ExtendedGridIndex2D
7629 __init__(ExtendedGridIndex2D self, int x) -> ExtendedGridIndex2D
7630 __init__(ExtendedGridIndex2D self, int x, int y) -> ExtendedGridIndex2D
7631 __init__(ExtendedGridIndex2D self, int x, int y, int z) -> ExtendedGridIndex2D
7632 __init__(ExtendedGridIndex2D self, int i, int j, int k, int l) -> ExtendedGridIndex2D
7633 __init__(ExtendedGridIndex2D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex2D
7634 __init__(ExtendedGridIndex2D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex2D
7635 __init__(ExtendedGridIndex2D self) -> ExtendedGridIndex2D
7637 _IMP_algebra.ExtendedGridIndex2D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex2D(*args))
7639 def get_dimension(self):
7640 r"""get_dimension(ExtendedGridIndex2D self) -> unsigned int"""
7641 return _IMP_algebra.ExtendedGridIndex2D_get_dimension(self)
7643 def __cmp__(self, o):
7644 r"""__cmp__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> int"""
7645 return _IMP_algebra.ExtendedGridIndex2D___cmp__(self, o)
7647 def __eq__(self, o):
7648 r"""__eq__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
7649 return _IMP_algebra.ExtendedGridIndex2D___eq__(self, o)
7651 def __ne__(self, o):
7652 r"""__ne__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
7653 return _IMP_algebra.ExtendedGridIndex2D___ne__(self, o)
7655 def __lt__(self, o):
7656 r"""__lt__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
7657 return _IMP_algebra.ExtendedGridIndex2D___lt__(self, o)
7659 def __gt__(self, o):
7660 r"""__gt__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
7661 return _IMP_algebra.ExtendedGridIndex2D___gt__(self, o)
7663 def __ge__(self, o):
7664 r"""__ge__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
7665 return _IMP_algebra.ExtendedGridIndex2D___ge__(self, o)
7667 def __le__(self, o):
7668 r"""__le__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
7669 return _IMP_algebra.ExtendedGridIndex2D___le__(self, o)
7671 def __setitem__(self, i, v):
7672 r"""__setitem__(ExtendedGridIndex2D self, unsigned int i, int const & v)"""
7673 return _IMP_algebra.ExtendedGridIndex2D___setitem__(self, i, v)
7675 def __getitem__(self, i):
7676 r"""__getitem__(ExtendedGridIndex2D self, unsigned int i) -> int const &"""
7677 return _IMP_algebra.ExtendedGridIndex2D___getitem__(self, i)
7679 def show(self, *args):
7680 r"""show(ExtendedGridIndex2D self, _ostream out=std::cout)"""
7681 return _IMP_algebra.ExtendedGridIndex2D_show(self, *args)
7684 r"""__len__(ExtendedGridIndex2D self) -> unsigned int"""
7685 return _IMP_algebra.ExtendedGridIndex2D___len__(self)
7688 r"""__hash__(ExtendedGridIndex2D self) -> std::size_t"""
7689 return _IMP_algebra.ExtendedGridIndex2D___hash__(self)
7691 def get_uniform_offset(self, ii):
7692 r"""get_uniform_offset(ExtendedGridIndex2D self, int ii) -> ExtendedGridIndex2D"""
7693 return _IMP_algebra.ExtendedGridIndex2D_get_uniform_offset(self, ii)
7695 def get_offset(self, i, j, k):
7696 r"""get_offset(ExtendedGridIndex2D self, int i, int j, int k) -> ExtendedGridIndex2D"""
7697 return _IMP_algebra.ExtendedGridIndex2D_get_offset(self, i, j, k)
7700 r"""__str__(ExtendedGridIndex2D self) -> std::string"""
7701 return _IMP_algebra.ExtendedGridIndex2D___str__(self)
7704 r"""__repr__(ExtendedGridIndex2D self) -> std::string"""
7705 return _IMP_algebra.ExtendedGridIndex2D___repr__(self)
7707 def _get_as_binary(self):
7708 r"""_get_as_binary(ExtendedGridIndex2D self) -> PyObject *"""
7709 return _IMP_algebra.ExtendedGridIndex2D__get_as_binary(self)
7711 def _set_from_binary(self, p):
7712 r"""_set_from_binary(ExtendedGridIndex2D self, PyObject * p)"""
7713 return _IMP_algebra.ExtendedGridIndex2D__set_from_binary(self, p)
7715 def __getstate__(self):
7716 p = self._get_as_binary()
7717 if len(self.__dict__) > 1:
7718 d = self.__dict__.copy()
7723 def __setstate__(self, p):
7724 if not hasattr(self,
'this'):
7726 if isinstance(p, tuple):
7728 self.__dict__.update(d)
7729 return self._set_from_binary(p)
7731 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex2D
7734 _IMP_algebra.ExtendedGridIndex2D_swigregister(ExtendedGridIndex2D)
7735 class ExtendedGridIndex3D(IMP._Value):
7736 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 3 > class."""
7738 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7740 def __init__(self, *args):
7742 __init__(ExtendedGridIndex3D self, IMP::Ints vals) -> ExtendedGridIndex3D
7743 __init__(ExtendedGridIndex3D self, int x) -> ExtendedGridIndex3D
7744 __init__(ExtendedGridIndex3D self, int x, int y) -> ExtendedGridIndex3D
7745 __init__(ExtendedGridIndex3D self, int x, int y, int z) -> ExtendedGridIndex3D
7746 __init__(ExtendedGridIndex3D self, int i, int j, int k, int l) -> ExtendedGridIndex3D
7747 __init__(ExtendedGridIndex3D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex3D
7748 __init__(ExtendedGridIndex3D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex3D
7749 __init__(ExtendedGridIndex3D self) -> ExtendedGridIndex3D
7751 _IMP_algebra.ExtendedGridIndex3D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex3D(*args))
7753 def get_dimension(self):
7754 r"""get_dimension(ExtendedGridIndex3D self) -> unsigned int"""
7755 return _IMP_algebra.ExtendedGridIndex3D_get_dimension(self)
7757 def __cmp__(self, o):
7758 r"""__cmp__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> int"""
7759 return _IMP_algebra.ExtendedGridIndex3D___cmp__(self, o)
7761 def __eq__(self, o):
7762 r"""__eq__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
7763 return _IMP_algebra.ExtendedGridIndex3D___eq__(self, o)
7765 def __ne__(self, o):
7766 r"""__ne__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
7767 return _IMP_algebra.ExtendedGridIndex3D___ne__(self, o)
7769 def __lt__(self, o):
7770 r"""__lt__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
7771 return _IMP_algebra.ExtendedGridIndex3D___lt__(self, o)
7773 def __gt__(self, o):
7774 r"""__gt__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
7775 return _IMP_algebra.ExtendedGridIndex3D___gt__(self, o)
7777 def __ge__(self, o):
7778 r"""__ge__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
7779 return _IMP_algebra.ExtendedGridIndex3D___ge__(self, o)
7781 def __le__(self, o):
7782 r"""__le__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
7783 return _IMP_algebra.ExtendedGridIndex3D___le__(self, o)
7785 def __setitem__(self, i, v):
7786 r"""__setitem__(ExtendedGridIndex3D self, unsigned int i, int const & v)"""
7787 return _IMP_algebra.ExtendedGridIndex3D___setitem__(self, i, v)
7789 def __getitem__(self, i):
7790 r"""__getitem__(ExtendedGridIndex3D self, unsigned int i) -> int const &"""
7791 return _IMP_algebra.ExtendedGridIndex3D___getitem__(self, i)
7793 def show(self, *args):
7794 r"""show(ExtendedGridIndex3D self, _ostream out=std::cout)"""
7795 return _IMP_algebra.ExtendedGridIndex3D_show(self, *args)
7798 r"""__len__(ExtendedGridIndex3D self) -> unsigned int"""
7799 return _IMP_algebra.ExtendedGridIndex3D___len__(self)
7802 r"""__hash__(ExtendedGridIndex3D self) -> std::size_t"""
7803 return _IMP_algebra.ExtendedGridIndex3D___hash__(self)
7805 def get_uniform_offset(self, ii):
7806 r"""get_uniform_offset(ExtendedGridIndex3D self, int ii) -> ExtendedGridIndex3D"""
7807 return _IMP_algebra.ExtendedGridIndex3D_get_uniform_offset(self, ii)
7809 def get_offset(self, i, j, k):
7810 r"""get_offset(ExtendedGridIndex3D self, int i, int j, int k) -> ExtendedGridIndex3D"""
7811 return _IMP_algebra.ExtendedGridIndex3D_get_offset(self, i, j, k)
7814 r"""__str__(ExtendedGridIndex3D self) -> std::string"""
7815 return _IMP_algebra.ExtendedGridIndex3D___str__(self)
7818 r"""__repr__(ExtendedGridIndex3D self) -> std::string"""
7819 return _IMP_algebra.ExtendedGridIndex3D___repr__(self)
7821 def _get_as_binary(self):
7822 r"""_get_as_binary(ExtendedGridIndex3D self) -> PyObject *"""
7823 return _IMP_algebra.ExtendedGridIndex3D__get_as_binary(self)
7825 def _set_from_binary(self, p):
7826 r"""_set_from_binary(ExtendedGridIndex3D self, PyObject * p)"""
7827 return _IMP_algebra.ExtendedGridIndex3D__set_from_binary(self, p)
7829 def __getstate__(self):
7830 p = self._get_as_binary()
7831 if len(self.__dict__) > 1:
7832 d = self.__dict__.copy()
7837 def __setstate__(self, p):
7838 if not hasattr(self,
'this'):
7840 if isinstance(p, tuple):
7842 self.__dict__.update(d)
7843 return self._set_from_binary(p)
7845 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex3D
7848 _IMP_algebra.ExtendedGridIndex3D_swigregister(ExtendedGridIndex3D)
7849 class ExtendedGridIndex4D(IMP._Value):
7850 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 4 > class."""
7852 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7854 def __init__(self, *args):
7856 __init__(ExtendedGridIndex4D self, IMP::Ints vals) -> ExtendedGridIndex4D
7857 __init__(ExtendedGridIndex4D self, int x) -> ExtendedGridIndex4D
7858 __init__(ExtendedGridIndex4D self, int x, int y) -> ExtendedGridIndex4D
7859 __init__(ExtendedGridIndex4D self, int x, int y, int z) -> ExtendedGridIndex4D
7860 __init__(ExtendedGridIndex4D self, int i, int j, int k, int l) -> ExtendedGridIndex4D
7861 __init__(ExtendedGridIndex4D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex4D
7862 __init__(ExtendedGridIndex4D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex4D
7863 __init__(ExtendedGridIndex4D self) -> ExtendedGridIndex4D
7865 _IMP_algebra.ExtendedGridIndex4D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex4D(*args))
7867 def get_dimension(self):
7868 r"""get_dimension(ExtendedGridIndex4D self) -> unsigned int"""
7869 return _IMP_algebra.ExtendedGridIndex4D_get_dimension(self)
7871 def __cmp__(self, o):
7872 r"""__cmp__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> int"""
7873 return _IMP_algebra.ExtendedGridIndex4D___cmp__(self, o)
7875 def __eq__(self, o):
7876 r"""__eq__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
7877 return _IMP_algebra.ExtendedGridIndex4D___eq__(self, o)
7879 def __ne__(self, o):
7880 r"""__ne__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
7881 return _IMP_algebra.ExtendedGridIndex4D___ne__(self, o)
7883 def __lt__(self, o):
7884 r"""__lt__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
7885 return _IMP_algebra.ExtendedGridIndex4D___lt__(self, o)
7887 def __gt__(self, o):
7888 r"""__gt__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
7889 return _IMP_algebra.ExtendedGridIndex4D___gt__(self, o)
7891 def __ge__(self, o):
7892 r"""__ge__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
7893 return _IMP_algebra.ExtendedGridIndex4D___ge__(self, o)
7895 def __le__(self, o):
7896 r"""__le__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
7897 return _IMP_algebra.ExtendedGridIndex4D___le__(self, o)
7899 def __setitem__(self, i, v):
7900 r"""__setitem__(ExtendedGridIndex4D self, unsigned int i, int const & v)"""
7901 return _IMP_algebra.ExtendedGridIndex4D___setitem__(self, i, v)
7903 def __getitem__(self, i):
7904 r"""__getitem__(ExtendedGridIndex4D self, unsigned int i) -> int const &"""
7905 return _IMP_algebra.ExtendedGridIndex4D___getitem__(self, i)
7907 def show(self, *args):
7908 r"""show(ExtendedGridIndex4D self, _ostream out=std::cout)"""
7909 return _IMP_algebra.ExtendedGridIndex4D_show(self, *args)
7912 r"""__len__(ExtendedGridIndex4D self) -> unsigned int"""
7913 return _IMP_algebra.ExtendedGridIndex4D___len__(self)
7916 r"""__hash__(ExtendedGridIndex4D self) -> std::size_t"""
7917 return _IMP_algebra.ExtendedGridIndex4D___hash__(self)
7919 def get_uniform_offset(self, ii):
7920 r"""get_uniform_offset(ExtendedGridIndex4D self, int ii) -> ExtendedGridIndex4D"""
7921 return _IMP_algebra.ExtendedGridIndex4D_get_uniform_offset(self, ii)
7923 def get_offset(self, i, j, k):
7924 r"""get_offset(ExtendedGridIndex4D self, int i, int j, int k) -> ExtendedGridIndex4D"""
7925 return _IMP_algebra.ExtendedGridIndex4D_get_offset(self, i, j, k)
7928 r"""__str__(ExtendedGridIndex4D self) -> std::string"""
7929 return _IMP_algebra.ExtendedGridIndex4D___str__(self)
7932 r"""__repr__(ExtendedGridIndex4D self) -> std::string"""
7933 return _IMP_algebra.ExtendedGridIndex4D___repr__(self)
7935 def _get_as_binary(self):
7936 r"""_get_as_binary(ExtendedGridIndex4D self) -> PyObject *"""
7937 return _IMP_algebra.ExtendedGridIndex4D__get_as_binary(self)
7939 def _set_from_binary(self, p):
7940 r"""_set_from_binary(ExtendedGridIndex4D self, PyObject * p)"""
7941 return _IMP_algebra.ExtendedGridIndex4D__set_from_binary(self, p)
7943 def __getstate__(self):
7944 p = self._get_as_binary()
7945 if len(self.__dict__) > 1:
7946 d = self.__dict__.copy()
7951 def __setstate__(self, p):
7952 if not hasattr(self,
'this'):
7954 if isinstance(p, tuple):
7956 self.__dict__.update(d)
7957 return self._set_from_binary(p)
7959 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex4D
7962 _IMP_algebra.ExtendedGridIndex4D_swigregister(ExtendedGridIndex4D)
7963 class ExtendedGridIndex5D(IMP._Value):
7964 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 5 > class."""
7966 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7968 def __init__(self, *args):
7970 __init__(ExtendedGridIndex5D self, IMP::Ints vals) -> ExtendedGridIndex5D
7971 __init__(ExtendedGridIndex5D self, int x) -> ExtendedGridIndex5D
7972 __init__(ExtendedGridIndex5D self, int x, int y) -> ExtendedGridIndex5D
7973 __init__(ExtendedGridIndex5D self, int x, int y, int z) -> ExtendedGridIndex5D
7974 __init__(ExtendedGridIndex5D self, int i, int j, int k, int l) -> ExtendedGridIndex5D
7975 __init__(ExtendedGridIndex5D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex5D
7976 __init__(ExtendedGridIndex5D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex5D
7977 __init__(ExtendedGridIndex5D self) -> ExtendedGridIndex5D
7979 _IMP_algebra.ExtendedGridIndex5D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex5D(*args))
7981 def get_dimension(self):
7982 r"""get_dimension(ExtendedGridIndex5D self) -> unsigned int"""
7983 return _IMP_algebra.ExtendedGridIndex5D_get_dimension(self)
7985 def __cmp__(self, o):
7986 r"""__cmp__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> int"""
7987 return _IMP_algebra.ExtendedGridIndex5D___cmp__(self, o)
7989 def __eq__(self, o):
7990 r"""__eq__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
7991 return _IMP_algebra.ExtendedGridIndex5D___eq__(self, o)
7993 def __ne__(self, o):
7994 r"""__ne__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
7995 return _IMP_algebra.ExtendedGridIndex5D___ne__(self, o)
7997 def __lt__(self, o):
7998 r"""__lt__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
7999 return _IMP_algebra.ExtendedGridIndex5D___lt__(self, o)
8001 def __gt__(self, o):
8002 r"""__gt__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
8003 return _IMP_algebra.ExtendedGridIndex5D___gt__(self, o)
8005 def __ge__(self, o):
8006 r"""__ge__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
8007 return _IMP_algebra.ExtendedGridIndex5D___ge__(self, o)
8009 def __le__(self, o):
8010 r"""__le__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
8011 return _IMP_algebra.ExtendedGridIndex5D___le__(self, o)
8013 def __setitem__(self, i, v):
8014 r"""__setitem__(ExtendedGridIndex5D self, unsigned int i, int const & v)"""
8015 return _IMP_algebra.ExtendedGridIndex5D___setitem__(self, i, v)
8017 def __getitem__(self, i):
8018 r"""__getitem__(ExtendedGridIndex5D self, unsigned int i) -> int const &"""
8019 return _IMP_algebra.ExtendedGridIndex5D___getitem__(self, i)
8021 def show(self, *args):
8022 r"""show(ExtendedGridIndex5D self, _ostream out=std::cout)"""
8023 return _IMP_algebra.ExtendedGridIndex5D_show(self, *args)
8026 r"""__len__(ExtendedGridIndex5D self) -> unsigned int"""
8027 return _IMP_algebra.ExtendedGridIndex5D___len__(self)
8030 r"""__hash__(ExtendedGridIndex5D self) -> std::size_t"""
8031 return _IMP_algebra.ExtendedGridIndex5D___hash__(self)
8033 def get_uniform_offset(self, ii):
8034 r"""get_uniform_offset(ExtendedGridIndex5D self, int ii) -> ExtendedGridIndex5D"""
8035 return _IMP_algebra.ExtendedGridIndex5D_get_uniform_offset(self, ii)
8037 def get_offset(self, i, j, k):
8038 r"""get_offset(ExtendedGridIndex5D self, int i, int j, int k) -> ExtendedGridIndex5D"""
8039 return _IMP_algebra.ExtendedGridIndex5D_get_offset(self, i, j, k)
8042 r"""__str__(ExtendedGridIndex5D self) -> std::string"""
8043 return _IMP_algebra.ExtendedGridIndex5D___str__(self)
8046 r"""__repr__(ExtendedGridIndex5D self) -> std::string"""
8047 return _IMP_algebra.ExtendedGridIndex5D___repr__(self)
8049 def _get_as_binary(self):
8050 r"""_get_as_binary(ExtendedGridIndex5D self) -> PyObject *"""
8051 return _IMP_algebra.ExtendedGridIndex5D__get_as_binary(self)
8053 def _set_from_binary(self, p):
8054 r"""_set_from_binary(ExtendedGridIndex5D self, PyObject * p)"""
8055 return _IMP_algebra.ExtendedGridIndex5D__set_from_binary(self, p)
8057 def __getstate__(self):
8058 p = self._get_as_binary()
8059 if len(self.__dict__) > 1:
8060 d = self.__dict__.copy()
8065 def __setstate__(self, p):
8066 if not hasattr(self,
'this'):
8068 if isinstance(p, tuple):
8070 self.__dict__.update(d)
8071 return self._set_from_binary(p)
8073 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex5D
8076 _IMP_algebra.ExtendedGridIndex5D_swigregister(ExtendedGridIndex5D)
8077 class ExtendedGridIndex6D(IMP._Value):
8078 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 6 > class."""
8080 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8082 def __init__(self, *args):
8084 __init__(ExtendedGridIndex6D self, IMP::Ints vals) -> ExtendedGridIndex6D
8085 __init__(ExtendedGridIndex6D self, int x) -> ExtendedGridIndex6D
8086 __init__(ExtendedGridIndex6D self, int x, int y) -> ExtendedGridIndex6D
8087 __init__(ExtendedGridIndex6D self, int x, int y, int z) -> ExtendedGridIndex6D
8088 __init__(ExtendedGridIndex6D self, int i, int j, int k, int l) -> ExtendedGridIndex6D
8089 __init__(ExtendedGridIndex6D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex6D
8090 __init__(ExtendedGridIndex6D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex6D
8091 __init__(ExtendedGridIndex6D self) -> ExtendedGridIndex6D
8093 _IMP_algebra.ExtendedGridIndex6D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex6D(*args))
8095 def get_dimension(self):
8096 r"""get_dimension(ExtendedGridIndex6D self) -> unsigned int"""
8097 return _IMP_algebra.ExtendedGridIndex6D_get_dimension(self)
8099 def __cmp__(self, o):
8100 r"""__cmp__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> int"""
8101 return _IMP_algebra.ExtendedGridIndex6D___cmp__(self, o)
8103 def __eq__(self, o):
8104 r"""__eq__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
8105 return _IMP_algebra.ExtendedGridIndex6D___eq__(self, o)
8107 def __ne__(self, o):
8108 r"""__ne__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
8109 return _IMP_algebra.ExtendedGridIndex6D___ne__(self, o)
8111 def __lt__(self, o):
8112 r"""__lt__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
8113 return _IMP_algebra.ExtendedGridIndex6D___lt__(self, o)
8115 def __gt__(self, o):
8116 r"""__gt__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
8117 return _IMP_algebra.ExtendedGridIndex6D___gt__(self, o)
8119 def __ge__(self, o):
8120 r"""__ge__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
8121 return _IMP_algebra.ExtendedGridIndex6D___ge__(self, o)
8123 def __le__(self, o):
8124 r"""__le__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
8125 return _IMP_algebra.ExtendedGridIndex6D___le__(self, o)
8127 def __setitem__(self, i, v):
8128 r"""__setitem__(ExtendedGridIndex6D self, unsigned int i, int const & v)"""
8129 return _IMP_algebra.ExtendedGridIndex6D___setitem__(self, i, v)
8131 def __getitem__(self, i):
8132 r"""__getitem__(ExtendedGridIndex6D self, unsigned int i) -> int const &"""
8133 return _IMP_algebra.ExtendedGridIndex6D___getitem__(self, i)
8135 def show(self, *args):
8136 r"""show(ExtendedGridIndex6D self, _ostream out=std::cout)"""
8137 return _IMP_algebra.ExtendedGridIndex6D_show(self, *args)
8140 r"""__len__(ExtendedGridIndex6D self) -> unsigned int"""
8141 return _IMP_algebra.ExtendedGridIndex6D___len__(self)
8144 r"""__hash__(ExtendedGridIndex6D self) -> std::size_t"""
8145 return _IMP_algebra.ExtendedGridIndex6D___hash__(self)
8147 def get_uniform_offset(self, ii):
8148 r"""get_uniform_offset(ExtendedGridIndex6D self, int ii) -> ExtendedGridIndex6D"""
8149 return _IMP_algebra.ExtendedGridIndex6D_get_uniform_offset(self, ii)
8151 def get_offset(self, i, j, k):
8152 r"""get_offset(ExtendedGridIndex6D self, int i, int j, int k) -> ExtendedGridIndex6D"""
8153 return _IMP_algebra.ExtendedGridIndex6D_get_offset(self, i, j, k)
8156 r"""__str__(ExtendedGridIndex6D self) -> std::string"""
8157 return _IMP_algebra.ExtendedGridIndex6D___str__(self)
8160 r"""__repr__(ExtendedGridIndex6D self) -> std::string"""
8161 return _IMP_algebra.ExtendedGridIndex6D___repr__(self)
8163 def _get_as_binary(self):
8164 r"""_get_as_binary(ExtendedGridIndex6D self) -> PyObject *"""
8165 return _IMP_algebra.ExtendedGridIndex6D__get_as_binary(self)
8167 def _set_from_binary(self, p):
8168 r"""_set_from_binary(ExtendedGridIndex6D self, PyObject * p)"""
8169 return _IMP_algebra.ExtendedGridIndex6D__set_from_binary(self, p)
8171 def __getstate__(self):
8172 p = self._get_as_binary()
8173 if len(self.__dict__) > 1:
8174 d = self.__dict__.copy()
8179 def __setstate__(self, p):
8180 if not hasattr(self,
'this'):
8182 if isinstance(p, tuple):
8184 self.__dict__.update(d)
8185 return self._set_from_binary(p)
8187 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex6D
8190 _IMP_algebra.ExtendedGridIndex6D_swigregister(ExtendedGridIndex6D)
8191 class ExtendedGridIndexKD(IMP._Value):
8192 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< -1 > class."""
8194 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8196 def __init__(self, *args):
8198 __init__(ExtendedGridIndexKD self, IMP::Ints vals) -> ExtendedGridIndexKD
8199 __init__(ExtendedGridIndexKD self, int x) -> ExtendedGridIndexKD
8200 __init__(ExtendedGridIndexKD self, int x, int y) -> ExtendedGridIndexKD
8201 __init__(ExtendedGridIndexKD self, int x, int y, int z) -> ExtendedGridIndexKD
8202 __init__(ExtendedGridIndexKD self, int i, int j, int k, int l) -> ExtendedGridIndexKD
8203 __init__(ExtendedGridIndexKD self, int i, int j, int k, int l, int m) -> ExtendedGridIndexKD
8204 __init__(ExtendedGridIndexKD self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndexKD
8205 __init__(ExtendedGridIndexKD self) -> ExtendedGridIndexKD
8207 _IMP_algebra.ExtendedGridIndexKD_swiginit(self, _IMP_algebra.new_ExtendedGridIndexKD(*args))
8209 def get_dimension(self):
8210 r"""get_dimension(ExtendedGridIndexKD self) -> unsigned int"""
8211 return _IMP_algebra.ExtendedGridIndexKD_get_dimension(self)
8213 def __cmp__(self, o):
8214 r"""__cmp__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> int"""
8215 return _IMP_algebra.ExtendedGridIndexKD___cmp__(self, o)
8217 def __eq__(self, o):
8218 r"""__eq__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
8219 return _IMP_algebra.ExtendedGridIndexKD___eq__(self, o)
8221 def __ne__(self, o):
8222 r"""__ne__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
8223 return _IMP_algebra.ExtendedGridIndexKD___ne__(self, o)
8225 def __lt__(self, o):
8226 r"""__lt__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
8227 return _IMP_algebra.ExtendedGridIndexKD___lt__(self, o)
8229 def __gt__(self, o):
8230 r"""__gt__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
8231 return _IMP_algebra.ExtendedGridIndexKD___gt__(self, o)
8233 def __ge__(self, o):
8234 r"""__ge__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
8235 return _IMP_algebra.ExtendedGridIndexKD___ge__(self, o)
8237 def __le__(self, o):
8238 r"""__le__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
8239 return _IMP_algebra.ExtendedGridIndexKD___le__(self, o)
8241 def __setitem__(self, i, v):
8242 r"""__setitem__(ExtendedGridIndexKD self, unsigned int i, int const & v)"""
8243 return _IMP_algebra.ExtendedGridIndexKD___setitem__(self, i, v)
8245 def __getitem__(self, i):
8246 r"""__getitem__(ExtendedGridIndexKD self, unsigned int i) -> int const &"""
8247 return _IMP_algebra.ExtendedGridIndexKD___getitem__(self, i)
8249 def show(self, *args):
8250 r"""show(ExtendedGridIndexKD self, _ostream out=std::cout)"""
8251 return _IMP_algebra.ExtendedGridIndexKD_show(self, *args)
8254 r"""__len__(ExtendedGridIndexKD self) -> unsigned int"""
8255 return _IMP_algebra.ExtendedGridIndexKD___len__(self)
8258 r"""__hash__(ExtendedGridIndexKD self) -> std::size_t"""
8259 return _IMP_algebra.ExtendedGridIndexKD___hash__(self)
8261 def get_uniform_offset(self, ii):
8262 r"""get_uniform_offset(ExtendedGridIndexKD self, int ii) -> ExtendedGridIndexKD"""
8263 return _IMP_algebra.ExtendedGridIndexKD_get_uniform_offset(self, ii)
8265 def get_offset(self, i, j, k):
8266 r"""get_offset(ExtendedGridIndexKD self, int i, int j, int k) -> ExtendedGridIndexKD"""
8267 return _IMP_algebra.ExtendedGridIndexKD_get_offset(self, i, j, k)
8270 r"""__str__(ExtendedGridIndexKD self) -> std::string"""
8271 return _IMP_algebra.ExtendedGridIndexKD___str__(self)
8274 r"""__repr__(ExtendedGridIndexKD self) -> std::string"""
8275 return _IMP_algebra.ExtendedGridIndexKD___repr__(self)
8277 def _get_as_binary(self):
8278 r"""_get_as_binary(ExtendedGridIndexKD self) -> PyObject *"""
8279 return _IMP_algebra.ExtendedGridIndexKD__get_as_binary(self)
8281 def _set_from_binary(self, p):
8282 r"""_set_from_binary(ExtendedGridIndexKD self, PyObject * p)"""
8283 return _IMP_algebra.ExtendedGridIndexKD__set_from_binary(self, p)
8285 def __getstate__(self):
8286 p = self._get_as_binary()
8287 if len(self.__dict__) > 1:
8288 d = self.__dict__.copy()
8293 def __setstate__(self, p):
8294 if not hasattr(self,
'this'):
8296 if isinstance(p, tuple):
8298 self.__dict__.update(d)
8299 return self._set_from_binary(p)
8301 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndexKD
8304 _IMP_algebra.ExtendedGridIndexKD_swigregister(ExtendedGridIndexKD)
8305 class BoundedGridRange1D(object):
8306 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 1 > class."""
8308 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8311 def get_is_bounded():
8312 r"""get_is_bounded() -> bool"""
8313 return _IMP_algebra.BoundedGridRange1D_get_is_bounded()
8315 def __init__(self, *args):
8317 __init__(BoundedGridRange1D self) -> BoundedGridRange1D
8318 __init__(BoundedGridRange1D self, IMP::Ints const & counts) -> BoundedGridRange1D
8320 _IMP_algebra.BoundedGridRange1D_swiginit(self, _IMP_algebra.new_BoundedGridRange1D(*args))
8322 def get_number_of_voxels(self, *args):
8324 get_number_of_voxels(BoundedGridRange1D self, unsigned int i) -> unsigned int
8325 get_number_of_voxels(BoundedGridRange1D self) -> unsigned int
8327 return _IMP_algebra.BoundedGridRange1D_get_number_of_voxels(self, *args)
8329 def get_end_index(self):
8330 r"""get_end_index(BoundedGridRange1D self) -> ExtendedGridIndex1D"""
8331 return _IMP_algebra.BoundedGridRange1D_get_end_index(self)
8333 def show(self, *args):
8334 r"""show(BoundedGridRange1D self, _ostream out=std::cout)"""
8335 return _IMP_algebra.BoundedGridRange1D_show(self, *args)
8337 def get_all_indexes(self):
8338 r"""get_all_indexes(BoundedGridRange1D self) -> IMP::Vector< IMP::algebra::GridIndexD< 1 > >"""
8339 return _IMP_algebra.BoundedGridRange1D_get_all_indexes(self)
8342 r"""get_indexes(BoundedGridRange1D self, ExtendedGridIndex1D lb, ExtendedGridIndex1D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 1 > >"""
8343 return _IMP_algebra.BoundedGridRange1D_get_indexes(self, lb, ub)
8345 def get_extended_indexes(self, lb, ub):
8346 r"""get_extended_indexes(BoundedGridRange1D self, ExtendedGridIndex1D lb, ExtendedGridIndex1D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 1 > >"""
8347 return _IMP_algebra.BoundedGridRange1D_get_extended_indexes(self, lb, ub)
8350 r"""get_index(BoundedGridRange1D self, ExtendedGridIndex1D v) -> GridIndex1D"""
8351 return _IMP_algebra.BoundedGridRange1D_get_index(self, v)
8353 def get_has_index(self, v):
8354 r"""get_has_index(BoundedGridRange1D self, ExtendedGridIndex1D v) -> bool"""
8355 return _IMP_algebra.BoundedGridRange1D_get_has_index(self, v)
8357 def get_minimum_extended_index(self):
8358 r"""get_minimum_extended_index(BoundedGridRange1D self) -> ExtendedGridIndex1D"""
8359 return _IMP_algebra.BoundedGridRange1D_get_minimum_extended_index(self)
8361 def get_maximum_extended_index(self):
8362 r"""get_maximum_extended_index(BoundedGridRange1D self) -> ExtendedGridIndex1D"""
8363 return _IMP_algebra.BoundedGridRange1D_get_maximum_extended_index(self)
8366 r"""__str__(BoundedGridRange1D self) -> std::string"""
8367 return _IMP_algebra.BoundedGridRange1D___str__(self)
8370 r"""__repr__(BoundedGridRange1D self) -> std::string"""
8371 return _IMP_algebra.BoundedGridRange1D___repr__(self)
8373 def __cmp__(self, arg2):
8374 r"""__cmp__(BoundedGridRange1D self, BoundedGridRange1D arg2) -> int"""
8375 return _IMP_algebra.BoundedGridRange1D___cmp__(self, arg2)
8377 def __eq__(self, arg2):
8378 r"""__eq__(BoundedGridRange1D self, BoundedGridRange1D arg2) -> bool"""
8379 return _IMP_algebra.BoundedGridRange1D___eq__(self, arg2)
8381 def _get_as_binary(self):
8382 r"""_get_as_binary(BoundedGridRange1D self) -> PyObject *"""
8383 return _IMP_algebra.BoundedGridRange1D__get_as_binary(self)
8385 def _set_from_binary(self, p):
8386 r"""_set_from_binary(BoundedGridRange1D self, PyObject * p)"""
8387 return _IMP_algebra.BoundedGridRange1D__set_from_binary(self, p)
8389 def __getstate__(self):
8390 p = self._get_as_binary()
8391 if len(self.__dict__) > 1:
8392 d = self.__dict__.copy()
8397 def __setstate__(self, p):
8398 if not hasattr(self,
'this'):
8400 if isinstance(p, tuple):
8402 self.__dict__.update(d)
8403 return self._set_from_binary(p)
8405 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange1D
8408 _IMP_algebra.BoundedGridRange1D_swigregister(BoundedGridRange1D)
8409 class BoundedGridRange2D(object):
8410 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 2 > class."""
8412 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8415 def get_is_bounded():
8416 r"""get_is_bounded() -> bool"""
8417 return _IMP_algebra.BoundedGridRange2D_get_is_bounded()
8419 def __init__(self, *args):
8421 __init__(BoundedGridRange2D self) -> BoundedGridRange2D
8422 __init__(BoundedGridRange2D self, IMP::Ints const & counts) -> BoundedGridRange2D
8424 _IMP_algebra.BoundedGridRange2D_swiginit(self, _IMP_algebra.new_BoundedGridRange2D(*args))
8426 def get_number_of_voxels(self, *args):
8428 get_number_of_voxels(BoundedGridRange2D self, unsigned int i) -> unsigned int
8429 get_number_of_voxels(BoundedGridRange2D self) -> unsigned int
8431 return _IMP_algebra.BoundedGridRange2D_get_number_of_voxels(self, *args)
8433 def get_end_index(self):
8434 r"""get_end_index(BoundedGridRange2D self) -> ExtendedGridIndex2D"""
8435 return _IMP_algebra.BoundedGridRange2D_get_end_index(self)
8437 def show(self, *args):
8438 r"""show(BoundedGridRange2D self, _ostream out=std::cout)"""
8439 return _IMP_algebra.BoundedGridRange2D_show(self, *args)
8441 def get_all_indexes(self):
8442 r"""get_all_indexes(BoundedGridRange2D self) -> IMP::Vector< IMP::algebra::GridIndexD< 2 > >"""
8443 return _IMP_algebra.BoundedGridRange2D_get_all_indexes(self)
8446 r"""get_indexes(BoundedGridRange2D self, ExtendedGridIndex2D lb, ExtendedGridIndex2D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 2 > >"""
8447 return _IMP_algebra.BoundedGridRange2D_get_indexes(self, lb, ub)
8449 def get_extended_indexes(self, lb, ub):
8450 r"""get_extended_indexes(BoundedGridRange2D self, ExtendedGridIndex2D lb, ExtendedGridIndex2D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 2 > >"""
8451 return _IMP_algebra.BoundedGridRange2D_get_extended_indexes(self, lb, ub)
8454 r"""get_index(BoundedGridRange2D self, ExtendedGridIndex2D v) -> GridIndex2D"""
8455 return _IMP_algebra.BoundedGridRange2D_get_index(self, v)
8457 def get_has_index(self, v):
8458 r"""get_has_index(BoundedGridRange2D self, ExtendedGridIndex2D v) -> bool"""
8459 return _IMP_algebra.BoundedGridRange2D_get_has_index(self, v)
8461 def get_minimum_extended_index(self):
8462 r"""get_minimum_extended_index(BoundedGridRange2D self) -> ExtendedGridIndex2D"""
8463 return _IMP_algebra.BoundedGridRange2D_get_minimum_extended_index(self)
8465 def get_maximum_extended_index(self):
8466 r"""get_maximum_extended_index(BoundedGridRange2D self) -> ExtendedGridIndex2D"""
8467 return _IMP_algebra.BoundedGridRange2D_get_maximum_extended_index(self)
8470 r"""__str__(BoundedGridRange2D self) -> std::string"""
8471 return _IMP_algebra.BoundedGridRange2D___str__(self)
8474 r"""__repr__(BoundedGridRange2D self) -> std::string"""
8475 return _IMP_algebra.BoundedGridRange2D___repr__(self)
8477 def __cmp__(self, arg2):
8478 r"""__cmp__(BoundedGridRange2D self, BoundedGridRange2D arg2) -> int"""
8479 return _IMP_algebra.BoundedGridRange2D___cmp__(self, arg2)
8481 def __eq__(self, arg2):
8482 r"""__eq__(BoundedGridRange2D self, BoundedGridRange2D arg2) -> bool"""
8483 return _IMP_algebra.BoundedGridRange2D___eq__(self, arg2)
8485 def _get_as_binary(self):
8486 r"""_get_as_binary(BoundedGridRange2D self) -> PyObject *"""
8487 return _IMP_algebra.BoundedGridRange2D__get_as_binary(self)
8489 def _set_from_binary(self, p):
8490 r"""_set_from_binary(BoundedGridRange2D self, PyObject * p)"""
8491 return _IMP_algebra.BoundedGridRange2D__set_from_binary(self, p)
8493 def __getstate__(self):
8494 p = self._get_as_binary()
8495 if len(self.__dict__) > 1:
8496 d = self.__dict__.copy()
8501 def __setstate__(self, p):
8502 if not hasattr(self,
'this'):
8504 if isinstance(p, tuple):
8506 self.__dict__.update(d)
8507 return self._set_from_binary(p)
8509 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange2D
8512 _IMP_algebra.BoundedGridRange2D_swigregister(BoundedGridRange2D)
8513 class BoundedGridRange3D(object):
8514 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 3 > class."""
8516 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8519 def get_is_bounded():
8520 r"""get_is_bounded() -> bool"""
8521 return _IMP_algebra.BoundedGridRange3D_get_is_bounded()
8523 def __init__(self, *args):
8525 __init__(BoundedGridRange3D self) -> BoundedGridRange3D
8526 __init__(BoundedGridRange3D self, IMP::Ints const & counts) -> BoundedGridRange3D
8528 _IMP_algebra.BoundedGridRange3D_swiginit(self, _IMP_algebra.new_BoundedGridRange3D(*args))
8530 def get_number_of_voxels(self, *args):
8532 get_number_of_voxels(BoundedGridRange3D self, unsigned int i) -> unsigned int
8533 get_number_of_voxels(BoundedGridRange3D self) -> unsigned int
8535 return _IMP_algebra.BoundedGridRange3D_get_number_of_voxels(self, *args)
8537 def get_end_index(self):
8538 r"""get_end_index(BoundedGridRange3D self) -> ExtendedGridIndex3D"""
8539 return _IMP_algebra.BoundedGridRange3D_get_end_index(self)
8541 def show(self, *args):
8542 r"""show(BoundedGridRange3D self, _ostream out=std::cout)"""
8543 return _IMP_algebra.BoundedGridRange3D_show(self, *args)
8545 def get_all_indexes(self):
8546 r"""get_all_indexes(BoundedGridRange3D self) -> IMP::Vector< IMP::algebra::GridIndexD< 3 > >"""
8547 return _IMP_algebra.BoundedGridRange3D_get_all_indexes(self)
8550 r"""get_indexes(BoundedGridRange3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 3 > >"""
8551 return _IMP_algebra.BoundedGridRange3D_get_indexes(self, lb, ub)
8553 def get_extended_indexes(self, lb, ub):
8554 r"""get_extended_indexes(BoundedGridRange3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 > >"""
8555 return _IMP_algebra.BoundedGridRange3D_get_extended_indexes(self, lb, ub)
8558 r"""get_index(BoundedGridRange3D self, ExtendedGridIndex3D v) -> GridIndex3D"""
8559 return _IMP_algebra.BoundedGridRange3D_get_index(self, v)
8561 def get_has_index(self, v):
8562 r"""get_has_index(BoundedGridRange3D self, ExtendedGridIndex3D v) -> bool"""
8563 return _IMP_algebra.BoundedGridRange3D_get_has_index(self, v)
8565 def get_minimum_extended_index(self):
8566 r"""get_minimum_extended_index(BoundedGridRange3D self) -> ExtendedGridIndex3D"""
8567 return _IMP_algebra.BoundedGridRange3D_get_minimum_extended_index(self)
8569 def get_maximum_extended_index(self):
8570 r"""get_maximum_extended_index(BoundedGridRange3D self) -> ExtendedGridIndex3D"""
8571 return _IMP_algebra.BoundedGridRange3D_get_maximum_extended_index(self)
8574 r"""__str__(BoundedGridRange3D self) -> std::string"""
8575 return _IMP_algebra.BoundedGridRange3D___str__(self)
8578 r"""__repr__(BoundedGridRange3D self) -> std::string"""
8579 return _IMP_algebra.BoundedGridRange3D___repr__(self)
8581 def __cmp__(self, arg2):
8582 r"""__cmp__(BoundedGridRange3D self, BoundedGridRange3D arg2) -> int"""
8583 return _IMP_algebra.BoundedGridRange3D___cmp__(self, arg2)
8585 def __eq__(self, arg2):
8586 r"""__eq__(BoundedGridRange3D self, BoundedGridRange3D arg2) -> bool"""
8587 return _IMP_algebra.BoundedGridRange3D___eq__(self, arg2)
8589 def _get_as_binary(self):
8590 r"""_get_as_binary(BoundedGridRange3D self) -> PyObject *"""
8591 return _IMP_algebra.BoundedGridRange3D__get_as_binary(self)
8593 def _set_from_binary(self, p):
8594 r"""_set_from_binary(BoundedGridRange3D self, PyObject * p)"""
8595 return _IMP_algebra.BoundedGridRange3D__set_from_binary(self, p)
8597 def __getstate__(self):
8598 p = self._get_as_binary()
8599 if len(self.__dict__) > 1:
8600 d = self.__dict__.copy()
8605 def __setstate__(self, p):
8606 if not hasattr(self,
'this'):
8608 if isinstance(p, tuple):
8610 self.__dict__.update(d)
8611 return self._set_from_binary(p)
8613 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange3D
8616 _IMP_algebra.BoundedGridRange3D_swigregister(BoundedGridRange3D)
8617 class BoundedGridRange4D(object):
8618 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 4 > class."""
8620 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8623 def get_is_bounded():
8624 r"""get_is_bounded() -> bool"""
8625 return _IMP_algebra.BoundedGridRange4D_get_is_bounded()
8627 def __init__(self, *args):
8629 __init__(BoundedGridRange4D self) -> BoundedGridRange4D
8630 __init__(BoundedGridRange4D self, IMP::Ints const & counts) -> BoundedGridRange4D
8632 _IMP_algebra.BoundedGridRange4D_swiginit(self, _IMP_algebra.new_BoundedGridRange4D(*args))
8634 def get_number_of_voxels(self, *args):
8636 get_number_of_voxels(BoundedGridRange4D self, unsigned int i) -> unsigned int
8637 get_number_of_voxels(BoundedGridRange4D self) -> unsigned int
8639 return _IMP_algebra.BoundedGridRange4D_get_number_of_voxels(self, *args)
8641 def get_end_index(self):
8642 r"""get_end_index(BoundedGridRange4D self) -> ExtendedGridIndex4D"""
8643 return _IMP_algebra.BoundedGridRange4D_get_end_index(self)
8645 def show(self, *args):
8646 r"""show(BoundedGridRange4D self, _ostream out=std::cout)"""
8647 return _IMP_algebra.BoundedGridRange4D_show(self, *args)
8649 def get_all_indexes(self):
8650 r"""get_all_indexes(BoundedGridRange4D self) -> IMP::Vector< IMP::algebra::GridIndexD< 4 > >"""
8651 return _IMP_algebra.BoundedGridRange4D_get_all_indexes(self)
8654 r"""get_indexes(BoundedGridRange4D self, ExtendedGridIndex4D lb, ExtendedGridIndex4D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 4 > >"""
8655 return _IMP_algebra.BoundedGridRange4D_get_indexes(self, lb, ub)
8657 def get_extended_indexes(self, lb, ub):
8658 r"""get_extended_indexes(BoundedGridRange4D self, ExtendedGridIndex4D lb, ExtendedGridIndex4D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 4 > >"""
8659 return _IMP_algebra.BoundedGridRange4D_get_extended_indexes(self, lb, ub)
8662 r"""get_index(BoundedGridRange4D self, ExtendedGridIndex4D v) -> GridIndex4D"""
8663 return _IMP_algebra.BoundedGridRange4D_get_index(self, v)
8665 def get_has_index(self, v):
8666 r"""get_has_index(BoundedGridRange4D self, ExtendedGridIndex4D v) -> bool"""
8667 return _IMP_algebra.BoundedGridRange4D_get_has_index(self, v)
8669 def get_minimum_extended_index(self):
8670 r"""get_minimum_extended_index(BoundedGridRange4D self) -> ExtendedGridIndex4D"""
8671 return _IMP_algebra.BoundedGridRange4D_get_minimum_extended_index(self)
8673 def get_maximum_extended_index(self):
8674 r"""get_maximum_extended_index(BoundedGridRange4D self) -> ExtendedGridIndex4D"""
8675 return _IMP_algebra.BoundedGridRange4D_get_maximum_extended_index(self)
8678 r"""__str__(BoundedGridRange4D self) -> std::string"""
8679 return _IMP_algebra.BoundedGridRange4D___str__(self)
8682 r"""__repr__(BoundedGridRange4D self) -> std::string"""
8683 return _IMP_algebra.BoundedGridRange4D___repr__(self)
8685 def __cmp__(self, arg2):
8686 r"""__cmp__(BoundedGridRange4D self, BoundedGridRange4D arg2) -> int"""
8687 return _IMP_algebra.BoundedGridRange4D___cmp__(self, arg2)
8689 def __eq__(self, arg2):
8690 r"""__eq__(BoundedGridRange4D self, BoundedGridRange4D arg2) -> bool"""
8691 return _IMP_algebra.BoundedGridRange4D___eq__(self, arg2)
8693 def _get_as_binary(self):
8694 r"""_get_as_binary(BoundedGridRange4D self) -> PyObject *"""
8695 return _IMP_algebra.BoundedGridRange4D__get_as_binary(self)
8697 def _set_from_binary(self, p):
8698 r"""_set_from_binary(BoundedGridRange4D self, PyObject * p)"""
8699 return _IMP_algebra.BoundedGridRange4D__set_from_binary(self, p)
8701 def __getstate__(self):
8702 p = self._get_as_binary()
8703 if len(self.__dict__) > 1:
8704 d = self.__dict__.copy()
8709 def __setstate__(self, p):
8710 if not hasattr(self,
'this'):
8712 if isinstance(p, tuple):
8714 self.__dict__.update(d)
8715 return self._set_from_binary(p)
8717 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange4D
8720 _IMP_algebra.BoundedGridRange4D_swigregister(BoundedGridRange4D)
8721 class BoundedGridRange5D(object):
8722 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 5 > class."""
8724 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8727 def get_is_bounded():
8728 r"""get_is_bounded() -> bool"""
8729 return _IMP_algebra.BoundedGridRange5D_get_is_bounded()
8731 def __init__(self, *args):
8733 __init__(BoundedGridRange5D self) -> BoundedGridRange5D
8734 __init__(BoundedGridRange5D self, IMP::Ints const & counts) -> BoundedGridRange5D
8736 _IMP_algebra.BoundedGridRange5D_swiginit(self, _IMP_algebra.new_BoundedGridRange5D(*args))
8738 def get_number_of_voxels(self, *args):
8740 get_number_of_voxels(BoundedGridRange5D self, unsigned int i) -> unsigned int
8741 get_number_of_voxels(BoundedGridRange5D self) -> unsigned int
8743 return _IMP_algebra.BoundedGridRange5D_get_number_of_voxels(self, *args)
8745 def get_end_index(self):
8746 r"""get_end_index(BoundedGridRange5D self) -> ExtendedGridIndex5D"""
8747 return _IMP_algebra.BoundedGridRange5D_get_end_index(self)
8749 def show(self, *args):
8750 r"""show(BoundedGridRange5D self, _ostream out=std::cout)"""
8751 return _IMP_algebra.BoundedGridRange5D_show(self, *args)
8753 def get_all_indexes(self):
8754 r"""get_all_indexes(BoundedGridRange5D self) -> IMP::Vector< IMP::algebra::GridIndexD< 5 > >"""
8755 return _IMP_algebra.BoundedGridRange5D_get_all_indexes(self)
8758 r"""get_indexes(BoundedGridRange5D self, ExtendedGridIndex5D lb, ExtendedGridIndex5D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 5 > >"""
8759 return _IMP_algebra.BoundedGridRange5D_get_indexes(self, lb, ub)
8761 def get_extended_indexes(self, lb, ub):
8762 r"""get_extended_indexes(BoundedGridRange5D self, ExtendedGridIndex5D lb, ExtendedGridIndex5D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 5 > >"""
8763 return _IMP_algebra.BoundedGridRange5D_get_extended_indexes(self, lb, ub)
8766 r"""get_index(BoundedGridRange5D self, ExtendedGridIndex5D v) -> GridIndex5D"""
8767 return _IMP_algebra.BoundedGridRange5D_get_index(self, v)
8769 def get_has_index(self, v):
8770 r"""get_has_index(BoundedGridRange5D self, ExtendedGridIndex5D v) -> bool"""
8771 return _IMP_algebra.BoundedGridRange5D_get_has_index(self, v)
8773 def get_minimum_extended_index(self):
8774 r"""get_minimum_extended_index(BoundedGridRange5D self) -> ExtendedGridIndex5D"""
8775 return _IMP_algebra.BoundedGridRange5D_get_minimum_extended_index(self)
8777 def get_maximum_extended_index(self):
8778 r"""get_maximum_extended_index(BoundedGridRange5D self) -> ExtendedGridIndex5D"""
8779 return _IMP_algebra.BoundedGridRange5D_get_maximum_extended_index(self)
8782 r"""__str__(BoundedGridRange5D self) -> std::string"""
8783 return _IMP_algebra.BoundedGridRange5D___str__(self)
8786 r"""__repr__(BoundedGridRange5D self) -> std::string"""
8787 return _IMP_algebra.BoundedGridRange5D___repr__(self)
8789 def __cmp__(self, arg2):
8790 r"""__cmp__(BoundedGridRange5D self, BoundedGridRange5D arg2) -> int"""
8791 return _IMP_algebra.BoundedGridRange5D___cmp__(self, arg2)
8793 def __eq__(self, arg2):
8794 r"""__eq__(BoundedGridRange5D self, BoundedGridRange5D arg2) -> bool"""
8795 return _IMP_algebra.BoundedGridRange5D___eq__(self, arg2)
8797 def _get_as_binary(self):
8798 r"""_get_as_binary(BoundedGridRange5D self) -> PyObject *"""
8799 return _IMP_algebra.BoundedGridRange5D__get_as_binary(self)
8801 def _set_from_binary(self, p):
8802 r"""_set_from_binary(BoundedGridRange5D self, PyObject * p)"""
8803 return _IMP_algebra.BoundedGridRange5D__set_from_binary(self, p)
8805 def __getstate__(self):
8806 p = self._get_as_binary()
8807 if len(self.__dict__) > 1:
8808 d = self.__dict__.copy()
8813 def __setstate__(self, p):
8814 if not hasattr(self,
'this'):
8816 if isinstance(p, tuple):
8818 self.__dict__.update(d)
8819 return self._set_from_binary(p)
8821 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange5D
8824 _IMP_algebra.BoundedGridRange5D_swigregister(BoundedGridRange5D)
8825 class BoundedGridRange6D(object):
8826 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 6 > class."""
8828 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8831 def get_is_bounded():
8832 r"""get_is_bounded() -> bool"""
8833 return _IMP_algebra.BoundedGridRange6D_get_is_bounded()
8835 def __init__(self, *args):
8837 __init__(BoundedGridRange6D self) -> BoundedGridRange6D
8838 __init__(BoundedGridRange6D self, IMP::Ints const & counts) -> BoundedGridRange6D
8840 _IMP_algebra.BoundedGridRange6D_swiginit(self, _IMP_algebra.new_BoundedGridRange6D(*args))
8842 def get_number_of_voxels(self, *args):
8844 get_number_of_voxels(BoundedGridRange6D self, unsigned int i) -> unsigned int
8845 get_number_of_voxels(BoundedGridRange6D self) -> unsigned int
8847 return _IMP_algebra.BoundedGridRange6D_get_number_of_voxels(self, *args)
8849 def get_end_index(self):
8850 r"""get_end_index(BoundedGridRange6D self) -> ExtendedGridIndex6D"""
8851 return _IMP_algebra.BoundedGridRange6D_get_end_index(self)
8853 def show(self, *args):
8854 r"""show(BoundedGridRange6D self, _ostream out=std::cout)"""
8855 return _IMP_algebra.BoundedGridRange6D_show(self, *args)
8857 def get_all_indexes(self):
8858 r"""get_all_indexes(BoundedGridRange6D self) -> IMP::Vector< IMP::algebra::GridIndexD< 6 > >"""
8859 return _IMP_algebra.BoundedGridRange6D_get_all_indexes(self)
8862 r"""get_indexes(BoundedGridRange6D self, ExtendedGridIndex6D lb, ExtendedGridIndex6D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 6 > >"""
8863 return _IMP_algebra.BoundedGridRange6D_get_indexes(self, lb, ub)
8865 def get_extended_indexes(self, lb, ub):
8866 r"""get_extended_indexes(BoundedGridRange6D self, ExtendedGridIndex6D lb, ExtendedGridIndex6D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 6 > >"""
8867 return _IMP_algebra.BoundedGridRange6D_get_extended_indexes(self, lb, ub)
8870 r"""get_index(BoundedGridRange6D self, ExtendedGridIndex6D v) -> GridIndex6D"""
8871 return _IMP_algebra.BoundedGridRange6D_get_index(self, v)
8873 def get_has_index(self, v):
8874 r"""get_has_index(BoundedGridRange6D self, ExtendedGridIndex6D v) -> bool"""
8875 return _IMP_algebra.BoundedGridRange6D_get_has_index(self, v)
8877 def get_minimum_extended_index(self):
8878 r"""get_minimum_extended_index(BoundedGridRange6D self) -> ExtendedGridIndex6D"""
8879 return _IMP_algebra.BoundedGridRange6D_get_minimum_extended_index(self)
8881 def get_maximum_extended_index(self):
8882 r"""get_maximum_extended_index(BoundedGridRange6D self) -> ExtendedGridIndex6D"""
8883 return _IMP_algebra.BoundedGridRange6D_get_maximum_extended_index(self)
8886 r"""__str__(BoundedGridRange6D self) -> std::string"""
8887 return _IMP_algebra.BoundedGridRange6D___str__(self)
8890 r"""__repr__(BoundedGridRange6D self) -> std::string"""
8891 return _IMP_algebra.BoundedGridRange6D___repr__(self)
8893 def __cmp__(self, arg2):
8894 r"""__cmp__(BoundedGridRange6D self, BoundedGridRange6D arg2) -> int"""
8895 return _IMP_algebra.BoundedGridRange6D___cmp__(self, arg2)
8897 def __eq__(self, arg2):
8898 r"""__eq__(BoundedGridRange6D self, BoundedGridRange6D arg2) -> bool"""
8899 return _IMP_algebra.BoundedGridRange6D___eq__(self, arg2)
8901 def _get_as_binary(self):
8902 r"""_get_as_binary(BoundedGridRange6D self) -> PyObject *"""
8903 return _IMP_algebra.BoundedGridRange6D__get_as_binary(self)
8905 def _set_from_binary(self, p):
8906 r"""_set_from_binary(BoundedGridRange6D self, PyObject * p)"""
8907 return _IMP_algebra.BoundedGridRange6D__set_from_binary(self, p)
8909 def __getstate__(self):
8910 p = self._get_as_binary()
8911 if len(self.__dict__) > 1:
8912 d = self.__dict__.copy()
8917 def __setstate__(self, p):
8918 if not hasattr(self,
'this'):
8920 if isinstance(p, tuple):
8922 self.__dict__.update(d)
8923 return self._set_from_binary(p)
8925 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange6D
8928 _IMP_algebra.BoundedGridRange6D_swigregister(BoundedGridRange6D)
8929 class BoundedGridRangeKD(object):
8930 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< -1 > class."""
8932 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8935 def get_is_bounded():
8936 r"""get_is_bounded() -> bool"""
8937 return _IMP_algebra.BoundedGridRangeKD_get_is_bounded()
8939 def __init__(self, *args):
8941 __init__(BoundedGridRangeKD self) -> BoundedGridRangeKD
8942 __init__(BoundedGridRangeKD self, IMP::Ints const & counts) -> BoundedGridRangeKD
8944 _IMP_algebra.BoundedGridRangeKD_swiginit(self, _IMP_algebra.new_BoundedGridRangeKD(*args))
8946 def get_number_of_voxels(self, *args):
8948 get_number_of_voxels(BoundedGridRangeKD self, unsigned int i) -> unsigned int
8949 get_number_of_voxels(BoundedGridRangeKD self) -> unsigned int
8951 return _IMP_algebra.BoundedGridRangeKD_get_number_of_voxels(self, *args)
8953 def get_end_index(self):
8954 r"""get_end_index(BoundedGridRangeKD self) -> ExtendedGridIndexKD"""
8955 return _IMP_algebra.BoundedGridRangeKD_get_end_index(self)
8957 def show(self, *args):
8958 r"""show(BoundedGridRangeKD self, _ostream out=std::cout)"""
8959 return _IMP_algebra.BoundedGridRangeKD_show(self, *args)
8961 def get_all_indexes(self):
8962 r"""get_all_indexes(BoundedGridRangeKD self) -> IMP::Vector< IMP::algebra::GridIndexD< -1 > >"""
8963 return _IMP_algebra.BoundedGridRangeKD_get_all_indexes(self)
8966 r"""get_indexes(BoundedGridRangeKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::GridIndexD< -1 > >"""
8967 return _IMP_algebra.BoundedGridRangeKD_get_indexes(self, lb, ub)
8969 def get_extended_indexes(self, lb, ub):
8970 r"""get_extended_indexes(BoundedGridRangeKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 > >"""
8971 return _IMP_algebra.BoundedGridRangeKD_get_extended_indexes(self, lb, ub)
8974 r"""get_index(BoundedGridRangeKD self, ExtendedGridIndexKD v) -> GridIndexKD"""
8975 return _IMP_algebra.BoundedGridRangeKD_get_index(self, v)
8977 def get_has_index(self, v):
8978 r"""get_has_index(BoundedGridRangeKD self, ExtendedGridIndexKD v) -> bool"""
8979 return _IMP_algebra.BoundedGridRangeKD_get_has_index(self, v)
8981 def get_minimum_extended_index(self):
8982 r"""get_minimum_extended_index(BoundedGridRangeKD self) -> ExtendedGridIndexKD"""
8983 return _IMP_algebra.BoundedGridRangeKD_get_minimum_extended_index(self)
8985 def get_maximum_extended_index(self):
8986 r"""get_maximum_extended_index(BoundedGridRangeKD self) -> ExtendedGridIndexKD"""
8987 return _IMP_algebra.BoundedGridRangeKD_get_maximum_extended_index(self)
8990 r"""__str__(BoundedGridRangeKD self) -> std::string"""
8991 return _IMP_algebra.BoundedGridRangeKD___str__(self)
8994 r"""__repr__(BoundedGridRangeKD self) -> std::string"""
8995 return _IMP_algebra.BoundedGridRangeKD___repr__(self)
8997 def __cmp__(self, arg2):
8998 r"""__cmp__(BoundedGridRangeKD self, BoundedGridRangeKD arg2) -> int"""
8999 return _IMP_algebra.BoundedGridRangeKD___cmp__(self, arg2)
9001 def __eq__(self, arg2):
9002 r"""__eq__(BoundedGridRangeKD self, BoundedGridRangeKD arg2) -> bool"""
9003 return _IMP_algebra.BoundedGridRangeKD___eq__(self, arg2)
9005 def _get_as_binary(self):
9006 r"""_get_as_binary(BoundedGridRangeKD self) -> PyObject *"""
9007 return _IMP_algebra.BoundedGridRangeKD__get_as_binary(self)
9009 def _set_from_binary(self, p):
9010 r"""_set_from_binary(BoundedGridRangeKD self, PyObject * p)"""
9011 return _IMP_algebra.BoundedGridRangeKD__set_from_binary(self, p)
9013 def __getstate__(self):
9014 p = self._get_as_binary()
9015 if len(self.__dict__) > 1:
9016 d = self.__dict__.copy()
9021 def __setstate__(self, p):
9022 if not hasattr(self,
'this'):
9024 if isinstance(p, tuple):
9026 self.__dict__.update(d)
9027 return self._set_from_binary(p)
9029 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRangeKD
9032 _IMP_algebra.BoundedGridRangeKD_swigregister(BoundedGridRangeKD)
9033 class UnboundedGridRange1D(object):
9034 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 1 > class."""
9036 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9038 def __init__(self, *args):
9040 __init__(UnboundedGridRange1D self) -> UnboundedGridRange1D
9041 __init__(UnboundedGridRange1D self, IMP::Ints const & arg2) -> UnboundedGridRange1D
9043 _IMP_algebra.UnboundedGridRange1D_swiginit(self, _IMP_algebra.new_UnboundedGridRange1D(*args))
9045 def set_number_of_voxels(self, arg2):
9046 r"""set_number_of_voxels(UnboundedGridRange1D self, IMP::Ints arg2)"""
9047 return _IMP_algebra.UnboundedGridRange1D_set_number_of_voxels(self, arg2)
9049 def get_number_of_voxels(self, arg2):
9050 r"""get_number_of_voxels(UnboundedGridRange1D self, int arg2) -> unsigned int"""
9051 return _IMP_algebra.UnboundedGridRange1D_get_number_of_voxels(self, arg2)
9054 def get_is_bounded():
9055 r"""get_is_bounded() -> bool"""
9056 return _IMP_algebra.UnboundedGridRange1D_get_is_bounded()
9058 def get_has_index(self, arg2):
9059 r"""get_has_index(UnboundedGridRange1D self, ExtendedGridIndex1D arg2) -> bool"""
9060 return _IMP_algebra.UnboundedGridRange1D_get_has_index(self, arg2)
9062 def show(self, *args):
9063 r"""show(UnboundedGridRange1D self, _ostream out=std::cout)"""
9064 return _IMP_algebra.UnboundedGridRange1D_show(self, *args)
9066 def get_extended_indexes(self, lb, ub):
9067 r"""get_extended_indexes(UnboundedGridRange1D self, ExtendedGridIndex1D lb, ExtendedGridIndex1D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 1 > >"""
9068 return _IMP_algebra.UnboundedGridRange1D_get_extended_indexes(self, lb, ub)
9071 r"""__str__(UnboundedGridRange1D self) -> std::string"""
9072 return _IMP_algebra.UnboundedGridRange1D___str__(self)
9075 r"""__repr__(UnboundedGridRange1D self) -> std::string"""
9076 return _IMP_algebra.UnboundedGridRange1D___repr__(self)
9078 def __cmp__(self, arg2):
9079 r"""__cmp__(UnboundedGridRange1D self, UnboundedGridRange1D arg2) -> int"""
9080 return _IMP_algebra.UnboundedGridRange1D___cmp__(self, arg2)
9082 def __eq__(self, arg2):
9083 r"""__eq__(UnboundedGridRange1D self, UnboundedGridRange1D arg2) -> bool"""
9084 return _IMP_algebra.UnboundedGridRange1D___eq__(self, arg2)
9086 def _get_as_binary(self):
9087 r"""_get_as_binary(UnboundedGridRange1D self) -> PyObject *"""
9088 return _IMP_algebra.UnboundedGridRange1D__get_as_binary(self)
9090 def _set_from_binary(self, p):
9091 r"""_set_from_binary(UnboundedGridRange1D self, PyObject * p)"""
9092 return _IMP_algebra.UnboundedGridRange1D__set_from_binary(self, p)
9094 def __getstate__(self):
9095 p = self._get_as_binary()
9096 if len(self.__dict__) > 1:
9097 d = self.__dict__.copy()
9102 def __setstate__(self, p):
9103 if not hasattr(self,
'this'):
9105 if isinstance(p, tuple):
9107 self.__dict__.update(d)
9108 return self._set_from_binary(p)
9110 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange1D
9113 _IMP_algebra.UnboundedGridRange1D_swigregister(UnboundedGridRange1D)
9114 class UnboundedGridRange2D(object):
9115 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 2 > class."""
9117 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9119 def __init__(self, *args):
9121 __init__(UnboundedGridRange2D self) -> UnboundedGridRange2D
9122 __init__(UnboundedGridRange2D self, IMP::Ints const & arg2) -> UnboundedGridRange2D
9124 _IMP_algebra.UnboundedGridRange2D_swiginit(self, _IMP_algebra.new_UnboundedGridRange2D(*args))
9126 def set_number_of_voxels(self, arg2):
9127 r"""set_number_of_voxels(UnboundedGridRange2D self, IMP::Ints arg2)"""
9128 return _IMP_algebra.UnboundedGridRange2D_set_number_of_voxels(self, arg2)
9130 def get_number_of_voxels(self, arg2):
9131 r"""get_number_of_voxels(UnboundedGridRange2D self, int arg2) -> unsigned int"""
9132 return _IMP_algebra.UnboundedGridRange2D_get_number_of_voxels(self, arg2)
9135 def get_is_bounded():
9136 r"""get_is_bounded() -> bool"""
9137 return _IMP_algebra.UnboundedGridRange2D_get_is_bounded()
9139 def get_has_index(self, arg2):
9140 r"""get_has_index(UnboundedGridRange2D self, ExtendedGridIndex2D arg2) -> bool"""
9141 return _IMP_algebra.UnboundedGridRange2D_get_has_index(self, arg2)
9143 def show(self, *args):
9144 r"""show(UnboundedGridRange2D self, _ostream out=std::cout)"""
9145 return _IMP_algebra.UnboundedGridRange2D_show(self, *args)
9147 def get_extended_indexes(self, lb, ub):
9148 r"""get_extended_indexes(UnboundedGridRange2D self, ExtendedGridIndex2D lb, ExtendedGridIndex2D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 2 > >"""
9149 return _IMP_algebra.UnboundedGridRange2D_get_extended_indexes(self, lb, ub)
9152 r"""__str__(UnboundedGridRange2D self) -> std::string"""
9153 return _IMP_algebra.UnboundedGridRange2D___str__(self)
9156 r"""__repr__(UnboundedGridRange2D self) -> std::string"""
9157 return _IMP_algebra.UnboundedGridRange2D___repr__(self)
9159 def __cmp__(self, arg2):
9160 r"""__cmp__(UnboundedGridRange2D self, UnboundedGridRange2D arg2) -> int"""
9161 return _IMP_algebra.UnboundedGridRange2D___cmp__(self, arg2)
9163 def __eq__(self, arg2):
9164 r"""__eq__(UnboundedGridRange2D self, UnboundedGridRange2D arg2) -> bool"""
9165 return _IMP_algebra.UnboundedGridRange2D___eq__(self, arg2)
9167 def _get_as_binary(self):
9168 r"""_get_as_binary(UnboundedGridRange2D self) -> PyObject *"""
9169 return _IMP_algebra.UnboundedGridRange2D__get_as_binary(self)
9171 def _set_from_binary(self, p):
9172 r"""_set_from_binary(UnboundedGridRange2D self, PyObject * p)"""
9173 return _IMP_algebra.UnboundedGridRange2D__set_from_binary(self, p)
9175 def __getstate__(self):
9176 p = self._get_as_binary()
9177 if len(self.__dict__) > 1:
9178 d = self.__dict__.copy()
9183 def __setstate__(self, p):
9184 if not hasattr(self,
'this'):
9186 if isinstance(p, tuple):
9188 self.__dict__.update(d)
9189 return self._set_from_binary(p)
9191 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange2D
9194 _IMP_algebra.UnboundedGridRange2D_swigregister(UnboundedGridRange2D)
9195 class UnboundedGridRange3D(object):
9196 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 3 > class."""
9198 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9200 def __init__(self, *args):
9202 __init__(UnboundedGridRange3D self) -> UnboundedGridRange3D
9203 __init__(UnboundedGridRange3D self, IMP::Ints const & arg2) -> UnboundedGridRange3D
9205 _IMP_algebra.UnboundedGridRange3D_swiginit(self, _IMP_algebra.new_UnboundedGridRange3D(*args))
9207 def set_number_of_voxels(self, arg2):
9208 r"""set_number_of_voxels(UnboundedGridRange3D self, IMP::Ints arg2)"""
9209 return _IMP_algebra.UnboundedGridRange3D_set_number_of_voxels(self, arg2)
9211 def get_number_of_voxels(self, arg2):
9212 r"""get_number_of_voxels(UnboundedGridRange3D self, int arg2) -> unsigned int"""
9213 return _IMP_algebra.UnboundedGridRange3D_get_number_of_voxels(self, arg2)
9216 def get_is_bounded():
9217 r"""get_is_bounded() -> bool"""
9218 return _IMP_algebra.UnboundedGridRange3D_get_is_bounded()
9220 def get_has_index(self, arg2):
9221 r"""get_has_index(UnboundedGridRange3D self, ExtendedGridIndex3D arg2) -> bool"""
9222 return _IMP_algebra.UnboundedGridRange3D_get_has_index(self, arg2)
9224 def show(self, *args):
9225 r"""show(UnboundedGridRange3D self, _ostream out=std::cout)"""
9226 return _IMP_algebra.UnboundedGridRange3D_show(self, *args)
9228 def get_extended_indexes(self, lb, ub):
9229 r"""get_extended_indexes(UnboundedGridRange3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 > >"""
9230 return _IMP_algebra.UnboundedGridRange3D_get_extended_indexes(self, lb, ub)
9233 r"""__str__(UnboundedGridRange3D self) -> std::string"""
9234 return _IMP_algebra.UnboundedGridRange3D___str__(self)
9237 r"""__repr__(UnboundedGridRange3D self) -> std::string"""
9238 return _IMP_algebra.UnboundedGridRange3D___repr__(self)
9240 def __cmp__(self, arg2):
9241 r"""__cmp__(UnboundedGridRange3D self, UnboundedGridRange3D arg2) -> int"""
9242 return _IMP_algebra.UnboundedGridRange3D___cmp__(self, arg2)
9244 def __eq__(self, arg2):
9245 r"""__eq__(UnboundedGridRange3D self, UnboundedGridRange3D arg2) -> bool"""
9246 return _IMP_algebra.UnboundedGridRange3D___eq__(self, arg2)
9248 def _get_as_binary(self):
9249 r"""_get_as_binary(UnboundedGridRange3D self) -> PyObject *"""
9250 return _IMP_algebra.UnboundedGridRange3D__get_as_binary(self)
9252 def _set_from_binary(self, p):
9253 r"""_set_from_binary(UnboundedGridRange3D self, PyObject * p)"""
9254 return _IMP_algebra.UnboundedGridRange3D__set_from_binary(self, p)
9256 def __getstate__(self):
9257 p = self._get_as_binary()
9258 if len(self.__dict__) > 1:
9259 d = self.__dict__.copy()
9264 def __setstate__(self, p):
9265 if not hasattr(self,
'this'):
9267 if isinstance(p, tuple):
9269 self.__dict__.update(d)
9270 return self._set_from_binary(p)
9272 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange3D
9275 _IMP_algebra.UnboundedGridRange3D_swigregister(UnboundedGridRange3D)
9276 class UnboundedGridRange4D(object):
9277 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 4 > class."""
9279 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9281 def __init__(self, *args):
9283 __init__(UnboundedGridRange4D self) -> UnboundedGridRange4D
9284 __init__(UnboundedGridRange4D self, IMP::Ints const & arg2) -> UnboundedGridRange4D
9286 _IMP_algebra.UnboundedGridRange4D_swiginit(self, _IMP_algebra.new_UnboundedGridRange4D(*args))
9288 def set_number_of_voxels(self, arg2):
9289 r"""set_number_of_voxels(UnboundedGridRange4D self, IMP::Ints arg2)"""
9290 return _IMP_algebra.UnboundedGridRange4D_set_number_of_voxels(self, arg2)
9292 def get_number_of_voxels(self, arg2):
9293 r"""get_number_of_voxels(UnboundedGridRange4D self, int arg2) -> unsigned int"""
9294 return _IMP_algebra.UnboundedGridRange4D_get_number_of_voxels(self, arg2)
9297 def get_is_bounded():
9298 r"""get_is_bounded() -> bool"""
9299 return _IMP_algebra.UnboundedGridRange4D_get_is_bounded()
9301 def get_has_index(self, arg2):
9302 r"""get_has_index(UnboundedGridRange4D self, ExtendedGridIndex4D arg2) -> bool"""
9303 return _IMP_algebra.UnboundedGridRange4D_get_has_index(self, arg2)
9305 def show(self, *args):
9306 r"""show(UnboundedGridRange4D self, _ostream out=std::cout)"""
9307 return _IMP_algebra.UnboundedGridRange4D_show(self, *args)
9309 def get_extended_indexes(self, lb, ub):
9310 r"""get_extended_indexes(UnboundedGridRange4D self, ExtendedGridIndex4D lb, ExtendedGridIndex4D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 4 > >"""
9311 return _IMP_algebra.UnboundedGridRange4D_get_extended_indexes(self, lb, ub)
9314 r"""__str__(UnboundedGridRange4D self) -> std::string"""
9315 return _IMP_algebra.UnboundedGridRange4D___str__(self)
9318 r"""__repr__(UnboundedGridRange4D self) -> std::string"""
9319 return _IMP_algebra.UnboundedGridRange4D___repr__(self)
9321 def __cmp__(self, arg2):
9322 r"""__cmp__(UnboundedGridRange4D self, UnboundedGridRange4D arg2) -> int"""
9323 return _IMP_algebra.UnboundedGridRange4D___cmp__(self, arg2)
9325 def __eq__(self, arg2):
9326 r"""__eq__(UnboundedGridRange4D self, UnboundedGridRange4D arg2) -> bool"""
9327 return _IMP_algebra.UnboundedGridRange4D___eq__(self, arg2)
9329 def _get_as_binary(self):
9330 r"""_get_as_binary(UnboundedGridRange4D self) -> PyObject *"""
9331 return _IMP_algebra.UnboundedGridRange4D__get_as_binary(self)
9333 def _set_from_binary(self, p):
9334 r"""_set_from_binary(UnboundedGridRange4D self, PyObject * p)"""
9335 return _IMP_algebra.UnboundedGridRange4D__set_from_binary(self, p)
9337 def __getstate__(self):
9338 p = self._get_as_binary()
9339 if len(self.__dict__) > 1:
9340 d = self.__dict__.copy()
9345 def __setstate__(self, p):
9346 if not hasattr(self,
'this'):
9348 if isinstance(p, tuple):
9350 self.__dict__.update(d)
9351 return self._set_from_binary(p)
9353 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange4D
9356 _IMP_algebra.UnboundedGridRange4D_swigregister(UnboundedGridRange4D)
9357 class UnboundedGridRange5D(object):
9358 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 5 > class."""
9360 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9362 def __init__(self, *args):
9364 __init__(UnboundedGridRange5D self) -> UnboundedGridRange5D
9365 __init__(UnboundedGridRange5D self, IMP::Ints const & arg2) -> UnboundedGridRange5D
9367 _IMP_algebra.UnboundedGridRange5D_swiginit(self, _IMP_algebra.new_UnboundedGridRange5D(*args))
9369 def set_number_of_voxels(self, arg2):
9370 r"""set_number_of_voxels(UnboundedGridRange5D self, IMP::Ints arg2)"""
9371 return _IMP_algebra.UnboundedGridRange5D_set_number_of_voxels(self, arg2)
9373 def get_number_of_voxels(self, arg2):
9374 r"""get_number_of_voxels(UnboundedGridRange5D self, int arg2) -> unsigned int"""
9375 return _IMP_algebra.UnboundedGridRange5D_get_number_of_voxels(self, arg2)
9378 def get_is_bounded():
9379 r"""get_is_bounded() -> bool"""
9380 return _IMP_algebra.UnboundedGridRange5D_get_is_bounded()
9382 def get_has_index(self, arg2):
9383 r"""get_has_index(UnboundedGridRange5D self, ExtendedGridIndex5D arg2) -> bool"""
9384 return _IMP_algebra.UnboundedGridRange5D_get_has_index(self, arg2)
9386 def show(self, *args):
9387 r"""show(UnboundedGridRange5D self, _ostream out=std::cout)"""
9388 return _IMP_algebra.UnboundedGridRange5D_show(self, *args)
9390 def get_extended_indexes(self, lb, ub):
9391 r"""get_extended_indexes(UnboundedGridRange5D self, ExtendedGridIndex5D lb, ExtendedGridIndex5D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 5 > >"""
9392 return _IMP_algebra.UnboundedGridRange5D_get_extended_indexes(self, lb, ub)
9395 r"""__str__(UnboundedGridRange5D self) -> std::string"""
9396 return _IMP_algebra.UnboundedGridRange5D___str__(self)
9399 r"""__repr__(UnboundedGridRange5D self) -> std::string"""
9400 return _IMP_algebra.UnboundedGridRange5D___repr__(self)
9402 def __cmp__(self, arg2):
9403 r"""__cmp__(UnboundedGridRange5D self, UnboundedGridRange5D arg2) -> int"""
9404 return _IMP_algebra.UnboundedGridRange5D___cmp__(self, arg2)
9406 def __eq__(self, arg2):
9407 r"""__eq__(UnboundedGridRange5D self, UnboundedGridRange5D arg2) -> bool"""
9408 return _IMP_algebra.UnboundedGridRange5D___eq__(self, arg2)
9410 def _get_as_binary(self):
9411 r"""_get_as_binary(UnboundedGridRange5D self) -> PyObject *"""
9412 return _IMP_algebra.UnboundedGridRange5D__get_as_binary(self)
9414 def _set_from_binary(self, p):
9415 r"""_set_from_binary(UnboundedGridRange5D self, PyObject * p)"""
9416 return _IMP_algebra.UnboundedGridRange5D__set_from_binary(self, p)
9418 def __getstate__(self):
9419 p = self._get_as_binary()
9420 if len(self.__dict__) > 1:
9421 d = self.__dict__.copy()
9426 def __setstate__(self, p):
9427 if not hasattr(self,
'this'):
9429 if isinstance(p, tuple):
9431 self.__dict__.update(d)
9432 return self._set_from_binary(p)
9434 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange5D
9437 _IMP_algebra.UnboundedGridRange5D_swigregister(UnboundedGridRange5D)
9438 class UnboundedGridRange6D(object):
9439 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 6 > class."""
9441 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9443 def __init__(self, *args):
9445 __init__(UnboundedGridRange6D self) -> UnboundedGridRange6D
9446 __init__(UnboundedGridRange6D self, IMP::Ints const & arg2) -> UnboundedGridRange6D
9448 _IMP_algebra.UnboundedGridRange6D_swiginit(self, _IMP_algebra.new_UnboundedGridRange6D(*args))
9450 def set_number_of_voxels(self, arg2):
9451 r"""set_number_of_voxels(UnboundedGridRange6D self, IMP::Ints arg2)"""
9452 return _IMP_algebra.UnboundedGridRange6D_set_number_of_voxels(self, arg2)
9454 def get_number_of_voxels(self, arg2):
9455 r"""get_number_of_voxels(UnboundedGridRange6D self, int arg2) -> unsigned int"""
9456 return _IMP_algebra.UnboundedGridRange6D_get_number_of_voxels(self, arg2)
9459 def get_is_bounded():
9460 r"""get_is_bounded() -> bool"""
9461 return _IMP_algebra.UnboundedGridRange6D_get_is_bounded()
9463 def get_has_index(self, arg2):
9464 r"""get_has_index(UnboundedGridRange6D self, ExtendedGridIndex6D arg2) -> bool"""
9465 return _IMP_algebra.UnboundedGridRange6D_get_has_index(self, arg2)
9467 def show(self, *args):
9468 r"""show(UnboundedGridRange6D self, _ostream out=std::cout)"""
9469 return _IMP_algebra.UnboundedGridRange6D_show(self, *args)
9471 def get_extended_indexes(self, lb, ub):
9472 r"""get_extended_indexes(UnboundedGridRange6D self, ExtendedGridIndex6D lb, ExtendedGridIndex6D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 6 > >"""
9473 return _IMP_algebra.UnboundedGridRange6D_get_extended_indexes(self, lb, ub)
9476 r"""__str__(UnboundedGridRange6D self) -> std::string"""
9477 return _IMP_algebra.UnboundedGridRange6D___str__(self)
9480 r"""__repr__(UnboundedGridRange6D self) -> std::string"""
9481 return _IMP_algebra.UnboundedGridRange6D___repr__(self)
9483 def __cmp__(self, arg2):
9484 r"""__cmp__(UnboundedGridRange6D self, UnboundedGridRange6D arg2) -> int"""
9485 return _IMP_algebra.UnboundedGridRange6D___cmp__(self, arg2)
9487 def __eq__(self, arg2):
9488 r"""__eq__(UnboundedGridRange6D self, UnboundedGridRange6D arg2) -> bool"""
9489 return _IMP_algebra.UnboundedGridRange6D___eq__(self, arg2)
9491 def _get_as_binary(self):
9492 r"""_get_as_binary(UnboundedGridRange6D self) -> PyObject *"""
9493 return _IMP_algebra.UnboundedGridRange6D__get_as_binary(self)
9495 def _set_from_binary(self, p):
9496 r"""_set_from_binary(UnboundedGridRange6D self, PyObject * p)"""
9497 return _IMP_algebra.UnboundedGridRange6D__set_from_binary(self, p)
9499 def __getstate__(self):
9500 p = self._get_as_binary()
9501 if len(self.__dict__) > 1:
9502 d = self.__dict__.copy()
9507 def __setstate__(self, p):
9508 if not hasattr(self,
'this'):
9510 if isinstance(p, tuple):
9512 self.__dict__.update(d)
9513 return self._set_from_binary(p)
9515 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange6D
9518 _IMP_algebra.UnboundedGridRange6D_swigregister(UnboundedGridRange6D)
9519 class UnboundedGridRangeKD(object):
9520 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< -1 > class."""
9522 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9524 def __init__(self, *args):
9526 __init__(UnboundedGridRangeKD self) -> UnboundedGridRangeKD
9527 __init__(UnboundedGridRangeKD self, IMP::Ints const & arg2) -> UnboundedGridRangeKD
9529 _IMP_algebra.UnboundedGridRangeKD_swiginit(self, _IMP_algebra.new_UnboundedGridRangeKD(*args))
9531 def set_number_of_voxels(self, arg2):
9532 r"""set_number_of_voxels(UnboundedGridRangeKD self, IMP::Ints arg2)"""
9533 return _IMP_algebra.UnboundedGridRangeKD_set_number_of_voxels(self, arg2)
9535 def get_number_of_voxels(self, arg2):
9536 r"""get_number_of_voxels(UnboundedGridRangeKD self, int arg2) -> unsigned int"""
9537 return _IMP_algebra.UnboundedGridRangeKD_get_number_of_voxels(self, arg2)
9540 def get_is_bounded():
9541 r"""get_is_bounded() -> bool"""
9542 return _IMP_algebra.UnboundedGridRangeKD_get_is_bounded()
9544 def get_has_index(self, arg2):
9545 r"""get_has_index(UnboundedGridRangeKD self, ExtendedGridIndexKD arg2) -> bool"""
9546 return _IMP_algebra.UnboundedGridRangeKD_get_has_index(self, arg2)
9548 def show(self, *args):
9549 r"""show(UnboundedGridRangeKD self, _ostream out=std::cout)"""
9550 return _IMP_algebra.UnboundedGridRangeKD_show(self, *args)
9552 def get_extended_indexes(self, lb, ub):
9553 r"""get_extended_indexes(UnboundedGridRangeKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 > >"""
9554 return _IMP_algebra.UnboundedGridRangeKD_get_extended_indexes(self, lb, ub)
9557 r"""__str__(UnboundedGridRangeKD self) -> std::string"""
9558 return _IMP_algebra.UnboundedGridRangeKD___str__(self)
9561 r"""__repr__(UnboundedGridRangeKD self) -> std::string"""
9562 return _IMP_algebra.UnboundedGridRangeKD___repr__(self)
9564 def __cmp__(self, arg2):
9565 r"""__cmp__(UnboundedGridRangeKD self, UnboundedGridRangeKD arg2) -> int"""
9566 return _IMP_algebra.UnboundedGridRangeKD___cmp__(self, arg2)
9568 def __eq__(self, arg2):
9569 r"""__eq__(UnboundedGridRangeKD self, UnboundedGridRangeKD arg2) -> bool"""
9570 return _IMP_algebra.UnboundedGridRangeKD___eq__(self, arg2)
9572 def _get_as_binary(self):
9573 r"""_get_as_binary(UnboundedGridRangeKD self) -> PyObject *"""
9574 return _IMP_algebra.UnboundedGridRangeKD__get_as_binary(self)
9576 def _set_from_binary(self, p):
9577 r"""_set_from_binary(UnboundedGridRangeKD self, PyObject * p)"""
9578 return _IMP_algebra.UnboundedGridRangeKD__set_from_binary(self, p)
9580 def __getstate__(self):
9581 p = self._get_as_binary()
9582 if len(self.__dict__) > 1:
9583 d = self.__dict__.copy()
9588 def __setstate__(self, p):
9589 if not hasattr(self,
'this'):
9591 if isinstance(p, tuple):
9593 self.__dict__.update(d)
9594 return self._set_from_binary(p)
9596 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRangeKD
9599 _IMP_algebra.UnboundedGridRangeKD_swigregister(UnboundedGridRangeKD)
9600 class DefaultEmbedding1D(object):
9601 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 1 > class."""
9603 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9605 def __init__(self, *args):
9607 __init__(DefaultEmbedding1D self, Vector1D origin, Vector1D cell) -> DefaultEmbedding1D
9608 __init__(DefaultEmbedding1D self) -> DefaultEmbedding1D
9610 _IMP_algebra.DefaultEmbedding1D_swiginit(self, _IMP_algebra.new_DefaultEmbedding1D(*args))
9612 def set_origin(self, o):
9613 r"""set_origin(DefaultEmbedding1D self, Vector1D o)"""
9614 return _IMP_algebra.DefaultEmbedding1D_set_origin(self, o)
9616 def get_origin(self):
9617 r"""get_origin(DefaultEmbedding1D self) -> Vector1D"""
9618 return _IMP_algebra.DefaultEmbedding1D_get_origin(self)
9620 def get_dimension(self):
9621 r"""get_dimension(DefaultEmbedding1D self) -> unsigned int"""
9622 return _IMP_algebra.DefaultEmbedding1D_get_dimension(self)
9624 def set_unit_cell(self, o):
9625 r"""set_unit_cell(DefaultEmbedding1D self, Vector1D o)"""
9626 return _IMP_algebra.DefaultEmbedding1D_set_unit_cell(self, o)
9628 def get_inverse_unit_cell(self):
9629 r"""get_inverse_unit_cell(DefaultEmbedding1D self) -> Vector1D"""
9630 return _IMP_algebra.DefaultEmbedding1D_get_inverse_unit_cell(self)
9632 def get_unit_cell(self):
9633 r"""get_unit_cell(DefaultEmbedding1D self) -> Vector1D"""
9634 return _IMP_algebra.DefaultEmbedding1D_get_unit_cell(self)
9636 def get_extended_index(self, o):
9637 r"""get_extended_index(DefaultEmbedding1D self, Vector1D o) -> ExtendedGridIndex1D"""
9638 return _IMP_algebra.DefaultEmbedding1D_get_extended_index(self, o)
9641 r"""get_index(DefaultEmbedding1D self, Vector1D o) -> GridIndex1D"""
9642 return _IMP_algebra.DefaultEmbedding1D_get_index(self, o)
9644 def get_center(self, *args):
9646 get_center(DefaultEmbedding1D self, ExtendedGridIndex1D ei) -> Vector1D
9647 get_center(DefaultEmbedding1D self, GridIndex1D ei) -> Vector1D
9649 return _IMP_algebra.DefaultEmbedding1D_get_center(self, *args)
9651 def get_bounding_box(self, *args):
9653 get_bounding_box(DefaultEmbedding1D self, ExtendedGridIndex1D ei) -> BoundingBox1D
9654 get_bounding_box(DefaultEmbedding1D self, GridIndex1D ei) -> BoundingBox1D
9656 return _IMP_algebra.DefaultEmbedding1D_get_bounding_box(self, *args)
9658 def show(self, *args):
9659 r"""show(DefaultEmbedding1D self, _ostream out=std::cout)"""
9660 return _IMP_algebra.DefaultEmbedding1D_show(self, *args)
9663 r"""__str__(DefaultEmbedding1D self) -> std::string"""
9664 return _IMP_algebra.DefaultEmbedding1D___str__(self)
9667 r"""__repr__(DefaultEmbedding1D self) -> std::string"""
9668 return _IMP_algebra.DefaultEmbedding1D___repr__(self)
9670 def __cmp__(self, arg2):
9671 r"""__cmp__(DefaultEmbedding1D self, DefaultEmbedding1D arg2) -> int"""
9672 return _IMP_algebra.DefaultEmbedding1D___cmp__(self, arg2)
9674 def __eq__(self, arg2):
9675 r"""__eq__(DefaultEmbedding1D self, DefaultEmbedding1D arg2) -> bool"""
9676 return _IMP_algebra.DefaultEmbedding1D___eq__(self, arg2)
9678 def _get_as_binary(self):
9679 r"""_get_as_binary(DefaultEmbedding1D self) -> PyObject *"""
9680 return _IMP_algebra.DefaultEmbedding1D__get_as_binary(self)
9682 def _set_from_binary(self, p):
9683 r"""_set_from_binary(DefaultEmbedding1D self, PyObject * p)"""
9684 return _IMP_algebra.DefaultEmbedding1D__set_from_binary(self, p)
9686 def __getstate__(self):
9687 p = self._get_as_binary()
9688 if len(self.__dict__) > 1:
9689 d = self.__dict__.copy()
9694 def __setstate__(self, p):
9695 if not hasattr(self,
'this'):
9697 if isinstance(p, tuple):
9699 self.__dict__.update(d)
9700 return self._set_from_binary(p)
9702 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding1D
9705 _IMP_algebra.DefaultEmbedding1D_swigregister(DefaultEmbedding1D)
9706 class DefaultEmbedding2D(object):
9707 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 2 > class."""
9709 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9711 def __init__(self, *args):
9713 __init__(DefaultEmbedding2D self, Vector2D origin, Vector2D cell) -> DefaultEmbedding2D
9714 __init__(DefaultEmbedding2D self) -> DefaultEmbedding2D
9716 _IMP_algebra.DefaultEmbedding2D_swiginit(self, _IMP_algebra.new_DefaultEmbedding2D(*args))
9718 def set_origin(self, o):
9719 r"""set_origin(DefaultEmbedding2D self, Vector2D o)"""
9720 return _IMP_algebra.DefaultEmbedding2D_set_origin(self, o)
9722 def get_origin(self):
9723 r"""get_origin(DefaultEmbedding2D self) -> Vector2D"""
9724 return _IMP_algebra.DefaultEmbedding2D_get_origin(self)
9726 def get_dimension(self):
9727 r"""get_dimension(DefaultEmbedding2D self) -> unsigned int"""
9728 return _IMP_algebra.DefaultEmbedding2D_get_dimension(self)
9730 def set_unit_cell(self, o):
9731 r"""set_unit_cell(DefaultEmbedding2D self, Vector2D o)"""
9732 return _IMP_algebra.DefaultEmbedding2D_set_unit_cell(self, o)
9734 def get_inverse_unit_cell(self):
9735 r"""get_inverse_unit_cell(DefaultEmbedding2D self) -> Vector2D"""
9736 return _IMP_algebra.DefaultEmbedding2D_get_inverse_unit_cell(self)
9738 def get_unit_cell(self):
9739 r"""get_unit_cell(DefaultEmbedding2D self) -> Vector2D"""
9740 return _IMP_algebra.DefaultEmbedding2D_get_unit_cell(self)
9742 def get_extended_index(self, o):
9743 r"""get_extended_index(DefaultEmbedding2D self, Vector2D o) -> ExtendedGridIndex2D"""
9744 return _IMP_algebra.DefaultEmbedding2D_get_extended_index(self, o)
9747 r"""get_index(DefaultEmbedding2D self, Vector2D o) -> GridIndex2D"""
9748 return _IMP_algebra.DefaultEmbedding2D_get_index(self, o)
9750 def get_center(self, *args):
9752 get_center(DefaultEmbedding2D self, ExtendedGridIndex2D ei) -> Vector2D
9753 get_center(DefaultEmbedding2D self, GridIndex2D ei) -> Vector2D
9755 return _IMP_algebra.DefaultEmbedding2D_get_center(self, *args)
9757 def get_bounding_box(self, *args):
9759 get_bounding_box(DefaultEmbedding2D self, ExtendedGridIndex2D ei) -> BoundingBox2D
9760 get_bounding_box(DefaultEmbedding2D self, GridIndex2D ei) -> BoundingBox2D
9762 return _IMP_algebra.DefaultEmbedding2D_get_bounding_box(self, *args)
9764 def show(self, *args):
9765 r"""show(DefaultEmbedding2D self, _ostream out=std::cout)"""
9766 return _IMP_algebra.DefaultEmbedding2D_show(self, *args)
9769 r"""__str__(DefaultEmbedding2D self) -> std::string"""
9770 return _IMP_algebra.DefaultEmbedding2D___str__(self)
9773 r"""__repr__(DefaultEmbedding2D self) -> std::string"""
9774 return _IMP_algebra.DefaultEmbedding2D___repr__(self)
9776 def __cmp__(self, arg2):
9777 r"""__cmp__(DefaultEmbedding2D self, DefaultEmbedding2D arg2) -> int"""
9778 return _IMP_algebra.DefaultEmbedding2D___cmp__(self, arg2)
9780 def __eq__(self, arg2):
9781 r"""__eq__(DefaultEmbedding2D self, DefaultEmbedding2D arg2) -> bool"""
9782 return _IMP_algebra.DefaultEmbedding2D___eq__(self, arg2)
9784 def _get_as_binary(self):
9785 r"""_get_as_binary(DefaultEmbedding2D self) -> PyObject *"""
9786 return _IMP_algebra.DefaultEmbedding2D__get_as_binary(self)
9788 def _set_from_binary(self, p):
9789 r"""_set_from_binary(DefaultEmbedding2D self, PyObject * p)"""
9790 return _IMP_algebra.DefaultEmbedding2D__set_from_binary(self, p)
9792 def __getstate__(self):
9793 p = self._get_as_binary()
9794 if len(self.__dict__) > 1:
9795 d = self.__dict__.copy()
9800 def __setstate__(self, p):
9801 if not hasattr(self,
'this'):
9803 if isinstance(p, tuple):
9805 self.__dict__.update(d)
9806 return self._set_from_binary(p)
9808 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding2D
9811 _IMP_algebra.DefaultEmbedding2D_swigregister(DefaultEmbedding2D)
9812 class DefaultEmbedding3D(object):
9813 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 3 > class."""
9815 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9817 def __init__(self, *args):
9819 __init__(DefaultEmbedding3D self, Vector3D origin, Vector3D cell) -> DefaultEmbedding3D
9820 __init__(DefaultEmbedding3D self) -> DefaultEmbedding3D
9822 _IMP_algebra.DefaultEmbedding3D_swiginit(self, _IMP_algebra.new_DefaultEmbedding3D(*args))
9824 def set_origin(self, o):
9825 r"""set_origin(DefaultEmbedding3D self, Vector3D o)"""
9826 return _IMP_algebra.DefaultEmbedding3D_set_origin(self, o)
9828 def get_origin(self):
9829 r"""get_origin(DefaultEmbedding3D self) -> Vector3D"""
9830 return _IMP_algebra.DefaultEmbedding3D_get_origin(self)
9832 def get_dimension(self):
9833 r"""get_dimension(DefaultEmbedding3D self) -> unsigned int"""
9834 return _IMP_algebra.DefaultEmbedding3D_get_dimension(self)
9836 def set_unit_cell(self, o):
9837 r"""set_unit_cell(DefaultEmbedding3D self, Vector3D o)"""
9838 return _IMP_algebra.DefaultEmbedding3D_set_unit_cell(self, o)
9840 def get_inverse_unit_cell(self):
9841 r"""get_inverse_unit_cell(DefaultEmbedding3D self) -> Vector3D"""
9842 return _IMP_algebra.DefaultEmbedding3D_get_inverse_unit_cell(self)
9844 def get_unit_cell(self):
9845 r"""get_unit_cell(DefaultEmbedding3D self) -> Vector3D"""
9846 return _IMP_algebra.DefaultEmbedding3D_get_unit_cell(self)
9848 def get_extended_index(self, o):
9849 r"""get_extended_index(DefaultEmbedding3D self, Vector3D o) -> ExtendedGridIndex3D"""
9850 return _IMP_algebra.DefaultEmbedding3D_get_extended_index(self, o)
9853 r"""get_index(DefaultEmbedding3D self, Vector3D o) -> GridIndex3D"""
9854 return _IMP_algebra.DefaultEmbedding3D_get_index(self, o)
9856 def get_center(self, *args):
9858 get_center(DefaultEmbedding3D self, ExtendedGridIndex3D ei) -> Vector3D
9859 get_center(DefaultEmbedding3D self, GridIndex3D ei) -> Vector3D
9861 return _IMP_algebra.DefaultEmbedding3D_get_center(self, *args)
9863 def get_bounding_box(self, *args):
9865 get_bounding_box(DefaultEmbedding3D self, ExtendedGridIndex3D ei) -> BoundingBox3D
9866 get_bounding_box(DefaultEmbedding3D self, GridIndex3D ei) -> BoundingBox3D
9868 return _IMP_algebra.DefaultEmbedding3D_get_bounding_box(self, *args)
9870 def show(self, *args):
9871 r"""show(DefaultEmbedding3D self, _ostream out=std::cout)"""
9872 return _IMP_algebra.DefaultEmbedding3D_show(self, *args)
9875 r"""__str__(DefaultEmbedding3D self) -> std::string"""
9876 return _IMP_algebra.DefaultEmbedding3D___str__(self)
9879 r"""__repr__(DefaultEmbedding3D self) -> std::string"""
9880 return _IMP_algebra.DefaultEmbedding3D___repr__(self)
9882 def __cmp__(self, arg2):
9883 r"""__cmp__(DefaultEmbedding3D self, DefaultEmbedding3D arg2) -> int"""
9884 return _IMP_algebra.DefaultEmbedding3D___cmp__(self, arg2)
9886 def __eq__(self, arg2):
9887 r"""__eq__(DefaultEmbedding3D self, DefaultEmbedding3D arg2) -> bool"""
9888 return _IMP_algebra.DefaultEmbedding3D___eq__(self, arg2)
9890 def _get_as_binary(self):
9891 r"""_get_as_binary(DefaultEmbedding3D self) -> PyObject *"""
9892 return _IMP_algebra.DefaultEmbedding3D__get_as_binary(self)
9894 def _set_from_binary(self, p):
9895 r"""_set_from_binary(DefaultEmbedding3D self, PyObject * p)"""
9896 return _IMP_algebra.DefaultEmbedding3D__set_from_binary(self, p)
9898 def __getstate__(self):
9899 p = self._get_as_binary()
9900 if len(self.__dict__) > 1:
9901 d = self.__dict__.copy()
9906 def __setstate__(self, p):
9907 if not hasattr(self,
'this'):
9909 if isinstance(p, tuple):
9911 self.__dict__.update(d)
9912 return self._set_from_binary(p)
9914 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding3D
9917 _IMP_algebra.DefaultEmbedding3D_swigregister(DefaultEmbedding3D)
9918 class DefaultEmbedding4D(object):
9919 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 4 > class."""
9921 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9923 def __init__(self, *args):
9925 __init__(DefaultEmbedding4D self, Vector4D origin, Vector4D cell) -> DefaultEmbedding4D
9926 __init__(DefaultEmbedding4D self) -> DefaultEmbedding4D
9928 _IMP_algebra.DefaultEmbedding4D_swiginit(self, _IMP_algebra.new_DefaultEmbedding4D(*args))
9930 def set_origin(self, o):
9931 r"""set_origin(DefaultEmbedding4D self, Vector4D o)"""
9932 return _IMP_algebra.DefaultEmbedding4D_set_origin(self, o)
9934 def get_origin(self):
9935 r"""get_origin(DefaultEmbedding4D self) -> Vector4D"""
9936 return _IMP_algebra.DefaultEmbedding4D_get_origin(self)
9938 def get_dimension(self):
9939 r"""get_dimension(DefaultEmbedding4D self) -> unsigned int"""
9940 return _IMP_algebra.DefaultEmbedding4D_get_dimension(self)
9942 def set_unit_cell(self, o):
9943 r"""set_unit_cell(DefaultEmbedding4D self, Vector4D o)"""
9944 return _IMP_algebra.DefaultEmbedding4D_set_unit_cell(self, o)
9946 def get_inverse_unit_cell(self):
9947 r"""get_inverse_unit_cell(DefaultEmbedding4D self) -> Vector4D"""
9948 return _IMP_algebra.DefaultEmbedding4D_get_inverse_unit_cell(self)
9950 def get_unit_cell(self):
9951 r"""get_unit_cell(DefaultEmbedding4D self) -> Vector4D"""
9952 return _IMP_algebra.DefaultEmbedding4D_get_unit_cell(self)
9954 def get_extended_index(self, o):
9955 r"""get_extended_index(DefaultEmbedding4D self, Vector4D o) -> ExtendedGridIndex4D"""
9956 return _IMP_algebra.DefaultEmbedding4D_get_extended_index(self, o)
9959 r"""get_index(DefaultEmbedding4D self, Vector4D o) -> GridIndex4D"""
9960 return _IMP_algebra.DefaultEmbedding4D_get_index(self, o)
9962 def get_center(self, *args):
9964 get_center(DefaultEmbedding4D self, ExtendedGridIndex4D ei) -> Vector4D
9965 get_center(DefaultEmbedding4D self, GridIndex4D ei) -> Vector4D
9967 return _IMP_algebra.DefaultEmbedding4D_get_center(self, *args)
9969 def get_bounding_box(self, *args):
9971 get_bounding_box(DefaultEmbedding4D self, ExtendedGridIndex4D ei) -> BoundingBox4D
9972 get_bounding_box(DefaultEmbedding4D self, GridIndex4D ei) -> BoundingBox4D
9974 return _IMP_algebra.DefaultEmbedding4D_get_bounding_box(self, *args)
9976 def show(self, *args):
9977 r"""show(DefaultEmbedding4D self, _ostream out=std::cout)"""
9978 return _IMP_algebra.DefaultEmbedding4D_show(self, *args)
9981 r"""__str__(DefaultEmbedding4D self) -> std::string"""
9982 return _IMP_algebra.DefaultEmbedding4D___str__(self)
9985 r"""__repr__(DefaultEmbedding4D self) -> std::string"""
9986 return _IMP_algebra.DefaultEmbedding4D___repr__(self)
9988 def __cmp__(self, arg2):
9989 r"""__cmp__(DefaultEmbedding4D self, DefaultEmbedding4D arg2) -> int"""
9990 return _IMP_algebra.DefaultEmbedding4D___cmp__(self, arg2)
9992 def __eq__(self, arg2):
9993 r"""__eq__(DefaultEmbedding4D self, DefaultEmbedding4D arg2) -> bool"""
9994 return _IMP_algebra.DefaultEmbedding4D___eq__(self, arg2)
9996 def _get_as_binary(self):
9997 r"""_get_as_binary(DefaultEmbedding4D self) -> PyObject *"""
9998 return _IMP_algebra.DefaultEmbedding4D__get_as_binary(self)
10000 def _set_from_binary(self, p):
10001 r"""_set_from_binary(DefaultEmbedding4D self, PyObject * p)"""
10002 return _IMP_algebra.DefaultEmbedding4D__set_from_binary(self, p)
10004 def __getstate__(self):
10005 p = self._get_as_binary()
10006 if len(self.__dict__) > 1:
10007 d = self.__dict__.copy()
10012 def __setstate__(self, p):
10013 if not hasattr(self,
'this'):
10015 if isinstance(p, tuple):
10017 self.__dict__.update(d)
10018 return self._set_from_binary(p)
10020 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding4D
10023 _IMP_algebra.DefaultEmbedding4D_swigregister(DefaultEmbedding4D)
10024 class DefaultEmbedding5D(object):
10025 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 5 > class."""
10027 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10029 def __init__(self, *args):
10031 __init__(DefaultEmbedding5D self, Vector5D origin, Vector5D cell) -> DefaultEmbedding5D
10032 __init__(DefaultEmbedding5D self) -> DefaultEmbedding5D
10034 _IMP_algebra.DefaultEmbedding5D_swiginit(self, _IMP_algebra.new_DefaultEmbedding5D(*args))
10036 def set_origin(self, o):
10037 r"""set_origin(DefaultEmbedding5D self, Vector5D o)"""
10038 return _IMP_algebra.DefaultEmbedding5D_set_origin(self, o)
10040 def get_origin(self):
10041 r"""get_origin(DefaultEmbedding5D self) -> Vector5D"""
10042 return _IMP_algebra.DefaultEmbedding5D_get_origin(self)
10044 def get_dimension(self):
10045 r"""get_dimension(DefaultEmbedding5D self) -> unsigned int"""
10046 return _IMP_algebra.DefaultEmbedding5D_get_dimension(self)
10048 def set_unit_cell(self, o):
10049 r"""set_unit_cell(DefaultEmbedding5D self, Vector5D o)"""
10050 return _IMP_algebra.DefaultEmbedding5D_set_unit_cell(self, o)
10052 def get_inverse_unit_cell(self):
10053 r"""get_inverse_unit_cell(DefaultEmbedding5D self) -> Vector5D"""
10054 return _IMP_algebra.DefaultEmbedding5D_get_inverse_unit_cell(self)
10056 def get_unit_cell(self):
10057 r"""get_unit_cell(DefaultEmbedding5D self) -> Vector5D"""
10058 return _IMP_algebra.DefaultEmbedding5D_get_unit_cell(self)
10060 def get_extended_index(self, o):
10061 r"""get_extended_index(DefaultEmbedding5D self, Vector5D o) -> ExtendedGridIndex5D"""
10062 return _IMP_algebra.DefaultEmbedding5D_get_extended_index(self, o)
10065 r"""get_index(DefaultEmbedding5D self, Vector5D o) -> GridIndex5D"""
10066 return _IMP_algebra.DefaultEmbedding5D_get_index(self, o)
10068 def get_center(self, *args):
10070 get_center(DefaultEmbedding5D self, ExtendedGridIndex5D ei) -> Vector5D
10071 get_center(DefaultEmbedding5D self, GridIndex5D ei) -> Vector5D
10073 return _IMP_algebra.DefaultEmbedding5D_get_center(self, *args)
10075 def get_bounding_box(self, *args):
10077 get_bounding_box(DefaultEmbedding5D self, ExtendedGridIndex5D ei) -> BoundingBox5D
10078 get_bounding_box(DefaultEmbedding5D self, GridIndex5D ei) -> BoundingBox5D
10080 return _IMP_algebra.DefaultEmbedding5D_get_bounding_box(self, *args)
10082 def show(self, *args):
10083 r"""show(DefaultEmbedding5D self, _ostream out=std::cout)"""
10084 return _IMP_algebra.DefaultEmbedding5D_show(self, *args)
10087 r"""__str__(DefaultEmbedding5D self) -> std::string"""
10088 return _IMP_algebra.DefaultEmbedding5D___str__(self)
10090 def __repr__(self):
10091 r"""__repr__(DefaultEmbedding5D self) -> std::string"""
10092 return _IMP_algebra.DefaultEmbedding5D___repr__(self)
10094 def __cmp__(self, arg2):
10095 r"""__cmp__(DefaultEmbedding5D self, DefaultEmbedding5D arg2) -> int"""
10096 return _IMP_algebra.DefaultEmbedding5D___cmp__(self, arg2)
10098 def __eq__(self, arg2):
10099 r"""__eq__(DefaultEmbedding5D self, DefaultEmbedding5D arg2) -> bool"""
10100 return _IMP_algebra.DefaultEmbedding5D___eq__(self, arg2)
10102 def _get_as_binary(self):
10103 r"""_get_as_binary(DefaultEmbedding5D self) -> PyObject *"""
10104 return _IMP_algebra.DefaultEmbedding5D__get_as_binary(self)
10106 def _set_from_binary(self, p):
10107 r"""_set_from_binary(DefaultEmbedding5D self, PyObject * p)"""
10108 return _IMP_algebra.DefaultEmbedding5D__set_from_binary(self, p)
10110 def __getstate__(self):
10111 p = self._get_as_binary()
10112 if len(self.__dict__) > 1:
10113 d = self.__dict__.copy()
10118 def __setstate__(self, p):
10119 if not hasattr(self,
'this'):
10121 if isinstance(p, tuple):
10123 self.__dict__.update(d)
10124 return self._set_from_binary(p)
10126 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding5D
10129 _IMP_algebra.DefaultEmbedding5D_swigregister(DefaultEmbedding5D)
10130 class DefaultEmbedding6D(object):
10131 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 6 > class."""
10133 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10135 def __init__(self, *args):
10137 __init__(DefaultEmbedding6D self, Vector6D origin, Vector6D cell) -> DefaultEmbedding6D
10138 __init__(DefaultEmbedding6D self) -> DefaultEmbedding6D
10140 _IMP_algebra.DefaultEmbedding6D_swiginit(self, _IMP_algebra.new_DefaultEmbedding6D(*args))
10142 def set_origin(self, o):
10143 r"""set_origin(DefaultEmbedding6D self, Vector6D o)"""
10144 return _IMP_algebra.DefaultEmbedding6D_set_origin(self, o)
10146 def get_origin(self):
10147 r"""get_origin(DefaultEmbedding6D self) -> Vector6D"""
10148 return _IMP_algebra.DefaultEmbedding6D_get_origin(self)
10150 def get_dimension(self):
10151 r"""get_dimension(DefaultEmbedding6D self) -> unsigned int"""
10152 return _IMP_algebra.DefaultEmbedding6D_get_dimension(self)
10154 def set_unit_cell(self, o):
10155 r"""set_unit_cell(DefaultEmbedding6D self, Vector6D o)"""
10156 return _IMP_algebra.DefaultEmbedding6D_set_unit_cell(self, o)
10158 def get_inverse_unit_cell(self):
10159 r"""get_inverse_unit_cell(DefaultEmbedding6D self) -> Vector6D"""
10160 return _IMP_algebra.DefaultEmbedding6D_get_inverse_unit_cell(self)
10162 def get_unit_cell(self):
10163 r"""get_unit_cell(DefaultEmbedding6D self) -> Vector6D"""
10164 return _IMP_algebra.DefaultEmbedding6D_get_unit_cell(self)
10166 def get_extended_index(self, o):
10167 r"""get_extended_index(DefaultEmbedding6D self, Vector6D o) -> ExtendedGridIndex6D"""
10168 return _IMP_algebra.DefaultEmbedding6D_get_extended_index(self, o)
10171 r"""get_index(DefaultEmbedding6D self, Vector6D o) -> GridIndex6D"""
10172 return _IMP_algebra.DefaultEmbedding6D_get_index(self, o)
10174 def get_center(self, *args):
10176 get_center(DefaultEmbedding6D self, ExtendedGridIndex6D ei) -> Vector6D
10177 get_center(DefaultEmbedding6D self, GridIndex6D ei) -> Vector6D
10179 return _IMP_algebra.DefaultEmbedding6D_get_center(self, *args)
10181 def get_bounding_box(self, *args):
10183 get_bounding_box(DefaultEmbedding6D self, ExtendedGridIndex6D ei) -> BoundingBox6D
10184 get_bounding_box(DefaultEmbedding6D self, GridIndex6D ei) -> BoundingBox6D
10186 return _IMP_algebra.DefaultEmbedding6D_get_bounding_box(self, *args)
10188 def show(self, *args):
10189 r"""show(DefaultEmbedding6D self, _ostream out=std::cout)"""
10190 return _IMP_algebra.DefaultEmbedding6D_show(self, *args)
10193 r"""__str__(DefaultEmbedding6D self) -> std::string"""
10194 return _IMP_algebra.DefaultEmbedding6D___str__(self)
10196 def __repr__(self):
10197 r"""__repr__(DefaultEmbedding6D self) -> std::string"""
10198 return _IMP_algebra.DefaultEmbedding6D___repr__(self)
10200 def __cmp__(self, arg2):
10201 r"""__cmp__(DefaultEmbedding6D self, DefaultEmbedding6D arg2) -> int"""
10202 return _IMP_algebra.DefaultEmbedding6D___cmp__(self, arg2)
10204 def __eq__(self, arg2):
10205 r"""__eq__(DefaultEmbedding6D self, DefaultEmbedding6D arg2) -> bool"""
10206 return _IMP_algebra.DefaultEmbedding6D___eq__(self, arg2)
10208 def _get_as_binary(self):
10209 r"""_get_as_binary(DefaultEmbedding6D self) -> PyObject *"""
10210 return _IMP_algebra.DefaultEmbedding6D__get_as_binary(self)
10212 def _set_from_binary(self, p):
10213 r"""_set_from_binary(DefaultEmbedding6D self, PyObject * p)"""
10214 return _IMP_algebra.DefaultEmbedding6D__set_from_binary(self, p)
10216 def __getstate__(self):
10217 p = self._get_as_binary()
10218 if len(self.__dict__) > 1:
10219 d = self.__dict__.copy()
10224 def __setstate__(self, p):
10225 if not hasattr(self,
'this'):
10227 if isinstance(p, tuple):
10229 self.__dict__.update(d)
10230 return self._set_from_binary(p)
10232 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding6D
10235 _IMP_algebra.DefaultEmbedding6D_swigregister(DefaultEmbedding6D)
10236 class DefaultEmbeddingKD(object):
10237 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< -1 > class."""
10239 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10241 def __init__(self, *args):
10243 __init__(DefaultEmbeddingKD self, VectorKD origin, VectorKD cell) -> DefaultEmbeddingKD
10244 __init__(DefaultEmbeddingKD self) -> DefaultEmbeddingKD
10246 _IMP_algebra.DefaultEmbeddingKD_swiginit(self, _IMP_algebra.new_DefaultEmbeddingKD(*args))
10248 def set_origin(self, o):
10249 r"""set_origin(DefaultEmbeddingKD self, VectorKD o)"""
10250 return _IMP_algebra.DefaultEmbeddingKD_set_origin(self, o)
10252 def get_origin(self):
10253 r"""get_origin(DefaultEmbeddingKD self) -> VectorKD"""
10254 return _IMP_algebra.DefaultEmbeddingKD_get_origin(self)
10256 def get_dimension(self):
10257 r"""get_dimension(DefaultEmbeddingKD self) -> unsigned int"""
10258 return _IMP_algebra.DefaultEmbeddingKD_get_dimension(self)
10260 def set_unit_cell(self, o):
10261 r"""set_unit_cell(DefaultEmbeddingKD self, VectorKD o)"""
10262 return _IMP_algebra.DefaultEmbeddingKD_set_unit_cell(self, o)
10264 def get_inverse_unit_cell(self):
10265 r"""get_inverse_unit_cell(DefaultEmbeddingKD self) -> VectorKD"""
10266 return _IMP_algebra.DefaultEmbeddingKD_get_inverse_unit_cell(self)
10268 def get_unit_cell(self):
10269 r"""get_unit_cell(DefaultEmbeddingKD self) -> VectorKD"""
10270 return _IMP_algebra.DefaultEmbeddingKD_get_unit_cell(self)
10272 def get_extended_index(self, o):
10273 r"""get_extended_index(DefaultEmbeddingKD self, VectorKD o) -> ExtendedGridIndexKD"""
10274 return _IMP_algebra.DefaultEmbeddingKD_get_extended_index(self, o)
10277 r"""get_index(DefaultEmbeddingKD self, VectorKD o) -> GridIndexKD"""
10278 return _IMP_algebra.DefaultEmbeddingKD_get_index(self, o)
10280 def get_center(self, *args):
10282 get_center(DefaultEmbeddingKD self, ExtendedGridIndexKD ei) -> VectorKD
10283 get_center(DefaultEmbeddingKD self, GridIndexKD ei) -> VectorKD
10285 return _IMP_algebra.DefaultEmbeddingKD_get_center(self, *args)
10287 def get_bounding_box(self, *args):
10289 get_bounding_box(DefaultEmbeddingKD self, ExtendedGridIndexKD ei) -> BoundingBoxKD
10290 get_bounding_box(DefaultEmbeddingKD self, GridIndexKD ei) -> BoundingBoxKD
10292 return _IMP_algebra.DefaultEmbeddingKD_get_bounding_box(self, *args)
10294 def show(self, *args):
10295 r"""show(DefaultEmbeddingKD self, _ostream out=std::cout)"""
10296 return _IMP_algebra.DefaultEmbeddingKD_show(self, *args)
10299 r"""__str__(DefaultEmbeddingKD self) -> std::string"""
10300 return _IMP_algebra.DefaultEmbeddingKD___str__(self)
10302 def __repr__(self):
10303 r"""__repr__(DefaultEmbeddingKD self) -> std::string"""
10304 return _IMP_algebra.DefaultEmbeddingKD___repr__(self)
10306 def __cmp__(self, arg2):
10307 r"""__cmp__(DefaultEmbeddingKD self, DefaultEmbeddingKD arg2) -> int"""
10308 return _IMP_algebra.DefaultEmbeddingKD___cmp__(self, arg2)
10310 def __eq__(self, arg2):
10311 r"""__eq__(DefaultEmbeddingKD self, DefaultEmbeddingKD arg2) -> bool"""
10312 return _IMP_algebra.DefaultEmbeddingKD___eq__(self, arg2)
10314 def _get_as_binary(self):
10315 r"""_get_as_binary(DefaultEmbeddingKD self) -> PyObject *"""
10316 return _IMP_algebra.DefaultEmbeddingKD__get_as_binary(self)
10318 def _set_from_binary(self, p):
10319 r"""_set_from_binary(DefaultEmbeddingKD self, PyObject * p)"""
10320 return _IMP_algebra.DefaultEmbeddingKD__set_from_binary(self, p)
10322 def __getstate__(self):
10323 p = self._get_as_binary()
10324 if len(self.__dict__) > 1:
10325 d = self.__dict__.copy()
10330 def __setstate__(self, p):
10331 if not hasattr(self,
'this'):
10333 if isinstance(p, tuple):
10335 self.__dict__.update(d)
10336 return self._set_from_binary(p)
10338 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbeddingKD
10341 _IMP_algebra.DefaultEmbeddingKD_swigregister(DefaultEmbeddingKD)
10342 class LogEmbedding1D(object):
10343 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 1 > class."""
10345 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10347 def __init__(self, *args):
10349 __init__(LogEmbedding1D self, Vector1D origin, Vector1D cell, Vector1D base) -> LogEmbedding1D
10350 __init__(LogEmbedding1D self, BoundingBox1D bb, Vector1D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding1D
10351 __init__(LogEmbedding1D self, Vector1D arg2, Vector1D arg3) -> LogEmbedding1D
10352 __init__(LogEmbedding1D self) -> LogEmbedding1D
10354 _IMP_algebra.LogEmbedding1D_swiginit(self, _IMP_algebra.new_LogEmbedding1D(*args))
10356 def set_origin(self, o):
10357 r"""set_origin(LogEmbedding1D self, Vector1D o)"""
10358 return _IMP_algebra.LogEmbedding1D_set_origin(self, o)
10360 def get_origin(self):
10361 r"""get_origin(LogEmbedding1D self) -> Vector1D"""
10362 return _IMP_algebra.LogEmbedding1D_get_origin(self)
10364 def get_dimension(self):
10365 r"""get_dimension(LogEmbedding1D self) -> unsigned int"""
10366 return _IMP_algebra.LogEmbedding1D_get_dimension(self)
10368 def set_unit_cell(self, *args):
10370 set_unit_cell(LogEmbedding1D self, Vector1D o, Vector1D base)
10371 set_unit_cell(LogEmbedding1D self, Vector1D o)
10373 return _IMP_algebra.LogEmbedding1D_set_unit_cell(self, *args)
10375 def get_unit_cell(self):
10376 r"""get_unit_cell(LogEmbedding1D self) -> Vector1D"""
10377 return _IMP_algebra.LogEmbedding1D_get_unit_cell(self)
10379 def get_extended_index(self, o):
10380 r"""get_extended_index(LogEmbedding1D self, Vector1D o) -> ExtendedGridIndex1D"""
10381 return _IMP_algebra.LogEmbedding1D_get_extended_index(self, o)
10384 r"""get_index(LogEmbedding1D self, Vector1D o) -> GridIndex1D"""
10385 return _IMP_algebra.LogEmbedding1D_get_index(self, o)
10387 def get_center(self, *args):
10389 get_center(LogEmbedding1D self, ExtendedGridIndex1D ei) -> Vector1D
10390 get_center(LogEmbedding1D self, GridIndex1D ei) -> Vector1D
10392 return _IMP_algebra.LogEmbedding1D_get_center(self, *args)
10394 def get_bounding_box(self, *args):
10396 get_bounding_box(LogEmbedding1D self, ExtendedGridIndex1D ei) -> BoundingBox1D
10397 get_bounding_box(LogEmbedding1D self, GridIndex1D ei) -> BoundingBox1D
10399 return _IMP_algebra.LogEmbedding1D_get_bounding_box(self, *args)
10401 def show(self, *args):
10402 r"""show(LogEmbedding1D self, _ostream out=std::cout)"""
10403 return _IMP_algebra.LogEmbedding1D_show(self, *args)
10406 r"""__str__(LogEmbedding1D self) -> std::string"""
10407 return _IMP_algebra.LogEmbedding1D___str__(self)
10409 def __repr__(self):
10410 r"""__repr__(LogEmbedding1D self) -> std::string"""
10411 return _IMP_algebra.LogEmbedding1D___repr__(self)
10413 def __cmp__(self, arg2):
10414 r"""__cmp__(LogEmbedding1D self, LogEmbedding1D arg2) -> int"""
10415 return _IMP_algebra.LogEmbedding1D___cmp__(self, arg2)
10417 def __eq__(self, arg2):
10418 r"""__eq__(LogEmbedding1D self, LogEmbedding1D arg2) -> bool"""
10419 return _IMP_algebra.LogEmbedding1D___eq__(self, arg2)
10421 def _get_as_binary(self):
10422 r"""_get_as_binary(LogEmbedding1D self) -> PyObject *"""
10423 return _IMP_algebra.LogEmbedding1D__get_as_binary(self)
10425 def _set_from_binary(self, p):
10426 r"""_set_from_binary(LogEmbedding1D self, PyObject * p)"""
10427 return _IMP_algebra.LogEmbedding1D__set_from_binary(self, p)
10429 def __getstate__(self):
10430 p = self._get_as_binary()
10431 if len(self.__dict__) > 1:
10432 d = self.__dict__.copy()
10437 def __setstate__(self, p):
10438 if not hasattr(self,
'this'):
10440 if isinstance(p, tuple):
10442 self.__dict__.update(d)
10443 return self._set_from_binary(p)
10445 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding1D
10448 _IMP_algebra.LogEmbedding1D_swigregister(LogEmbedding1D)
10449 class LogEmbedding2D(object):
10450 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 2 > class."""
10452 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10454 def __init__(self, *args):
10456 __init__(LogEmbedding2D self, Vector2D origin, Vector2D cell, Vector2D base) -> LogEmbedding2D
10457 __init__(LogEmbedding2D self, BoundingBox2D bb, Vector2D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding2D
10458 __init__(LogEmbedding2D self, Vector2D arg2, Vector2D arg3) -> LogEmbedding2D
10459 __init__(LogEmbedding2D self) -> LogEmbedding2D
10461 _IMP_algebra.LogEmbedding2D_swiginit(self, _IMP_algebra.new_LogEmbedding2D(*args))
10463 def set_origin(self, o):
10464 r"""set_origin(LogEmbedding2D self, Vector2D o)"""
10465 return _IMP_algebra.LogEmbedding2D_set_origin(self, o)
10467 def get_origin(self):
10468 r"""get_origin(LogEmbedding2D self) -> Vector2D"""
10469 return _IMP_algebra.LogEmbedding2D_get_origin(self)
10471 def get_dimension(self):
10472 r"""get_dimension(LogEmbedding2D self) -> unsigned int"""
10473 return _IMP_algebra.LogEmbedding2D_get_dimension(self)
10475 def set_unit_cell(self, *args):
10477 set_unit_cell(LogEmbedding2D self, Vector2D o, Vector2D base)
10478 set_unit_cell(LogEmbedding2D self, Vector2D o)
10480 return _IMP_algebra.LogEmbedding2D_set_unit_cell(self, *args)
10482 def get_unit_cell(self):
10483 r"""get_unit_cell(LogEmbedding2D self) -> Vector2D"""
10484 return _IMP_algebra.LogEmbedding2D_get_unit_cell(self)
10486 def get_extended_index(self, o):
10487 r"""get_extended_index(LogEmbedding2D self, Vector2D o) -> ExtendedGridIndex2D"""
10488 return _IMP_algebra.LogEmbedding2D_get_extended_index(self, o)
10491 r"""get_index(LogEmbedding2D self, Vector2D o) -> GridIndex2D"""
10492 return _IMP_algebra.LogEmbedding2D_get_index(self, o)
10494 def get_center(self, *args):
10496 get_center(LogEmbedding2D self, ExtendedGridIndex2D ei) -> Vector2D
10497 get_center(LogEmbedding2D self, GridIndex2D ei) -> Vector2D
10499 return _IMP_algebra.LogEmbedding2D_get_center(self, *args)
10501 def get_bounding_box(self, *args):
10503 get_bounding_box(LogEmbedding2D self, ExtendedGridIndex2D ei) -> BoundingBox2D
10504 get_bounding_box(LogEmbedding2D self, GridIndex2D ei) -> BoundingBox2D
10506 return _IMP_algebra.LogEmbedding2D_get_bounding_box(self, *args)
10508 def show(self, *args):
10509 r"""show(LogEmbedding2D self, _ostream out=std::cout)"""
10510 return _IMP_algebra.LogEmbedding2D_show(self, *args)
10513 r"""__str__(LogEmbedding2D self) -> std::string"""
10514 return _IMP_algebra.LogEmbedding2D___str__(self)
10516 def __repr__(self):
10517 r"""__repr__(LogEmbedding2D self) -> std::string"""
10518 return _IMP_algebra.LogEmbedding2D___repr__(self)
10520 def __cmp__(self, arg2):
10521 r"""__cmp__(LogEmbedding2D self, LogEmbedding2D arg2) -> int"""
10522 return _IMP_algebra.LogEmbedding2D___cmp__(self, arg2)
10524 def __eq__(self, arg2):
10525 r"""__eq__(LogEmbedding2D self, LogEmbedding2D arg2) -> bool"""
10526 return _IMP_algebra.LogEmbedding2D___eq__(self, arg2)
10528 def _get_as_binary(self):
10529 r"""_get_as_binary(LogEmbedding2D self) -> PyObject *"""
10530 return _IMP_algebra.LogEmbedding2D__get_as_binary(self)
10532 def _set_from_binary(self, p):
10533 r"""_set_from_binary(LogEmbedding2D self, PyObject * p)"""
10534 return _IMP_algebra.LogEmbedding2D__set_from_binary(self, p)
10536 def __getstate__(self):
10537 p = self._get_as_binary()
10538 if len(self.__dict__) > 1:
10539 d = self.__dict__.copy()
10544 def __setstate__(self, p):
10545 if not hasattr(self,
'this'):
10547 if isinstance(p, tuple):
10549 self.__dict__.update(d)
10550 return self._set_from_binary(p)
10552 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding2D
10555 _IMP_algebra.LogEmbedding2D_swigregister(LogEmbedding2D)
10556 class LogEmbedding4D(object):
10557 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 4 > class."""
10559 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10561 def __init__(self, *args):
10563 __init__(LogEmbedding4D self, Vector4D origin, Vector4D cell, Vector4D base) -> LogEmbedding4D
10564 __init__(LogEmbedding4D self, BoundingBox4D bb, Vector4D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding4D
10565 __init__(LogEmbedding4D self, Vector4D arg2, Vector4D arg3) -> LogEmbedding4D
10566 __init__(LogEmbedding4D self) -> LogEmbedding4D
10568 _IMP_algebra.LogEmbedding4D_swiginit(self, _IMP_algebra.new_LogEmbedding4D(*args))
10570 def set_origin(self, o):
10571 r"""set_origin(LogEmbedding4D self, Vector4D o)"""
10572 return _IMP_algebra.LogEmbedding4D_set_origin(self, o)
10574 def get_origin(self):
10575 r"""get_origin(LogEmbedding4D self) -> Vector4D"""
10576 return _IMP_algebra.LogEmbedding4D_get_origin(self)
10578 def get_dimension(self):
10579 r"""get_dimension(LogEmbedding4D self) -> unsigned int"""
10580 return _IMP_algebra.LogEmbedding4D_get_dimension(self)
10582 def set_unit_cell(self, *args):
10584 set_unit_cell(LogEmbedding4D self, Vector4D o, Vector4D base)
10585 set_unit_cell(LogEmbedding4D self, Vector4D o)
10587 return _IMP_algebra.LogEmbedding4D_set_unit_cell(self, *args)
10589 def get_unit_cell(self):
10590 r"""get_unit_cell(LogEmbedding4D self) -> Vector4D"""
10591 return _IMP_algebra.LogEmbedding4D_get_unit_cell(self)
10593 def get_extended_index(self, o):
10594 r"""get_extended_index(LogEmbedding4D self, Vector4D o) -> ExtendedGridIndex4D"""
10595 return _IMP_algebra.LogEmbedding4D_get_extended_index(self, o)
10598 r"""get_index(LogEmbedding4D self, Vector4D o) -> GridIndex4D"""
10599 return _IMP_algebra.LogEmbedding4D_get_index(self, o)
10601 def get_center(self, *args):
10603 get_center(LogEmbedding4D self, ExtendedGridIndex4D ei) -> Vector4D
10604 get_center(LogEmbedding4D self, GridIndex4D ei) -> Vector4D
10606 return _IMP_algebra.LogEmbedding4D_get_center(self, *args)
10608 def get_bounding_box(self, *args):
10610 get_bounding_box(LogEmbedding4D self, ExtendedGridIndex4D ei) -> BoundingBox4D
10611 get_bounding_box(LogEmbedding4D self, GridIndex4D ei) -> BoundingBox4D
10613 return _IMP_algebra.LogEmbedding4D_get_bounding_box(self, *args)
10615 def show(self, *args):
10616 r"""show(LogEmbedding4D self, _ostream out=std::cout)"""
10617 return _IMP_algebra.LogEmbedding4D_show(self, *args)
10620 r"""__str__(LogEmbedding4D self) -> std::string"""
10621 return _IMP_algebra.LogEmbedding4D___str__(self)
10623 def __repr__(self):
10624 r"""__repr__(LogEmbedding4D self) -> std::string"""
10625 return _IMP_algebra.LogEmbedding4D___repr__(self)
10627 def __cmp__(self, arg2):
10628 r"""__cmp__(LogEmbedding4D self, LogEmbedding4D arg2) -> int"""
10629 return _IMP_algebra.LogEmbedding4D___cmp__(self, arg2)
10631 def __eq__(self, arg2):
10632 r"""__eq__(LogEmbedding4D self, LogEmbedding4D arg2) -> bool"""
10633 return _IMP_algebra.LogEmbedding4D___eq__(self, arg2)
10635 def _get_as_binary(self):
10636 r"""_get_as_binary(LogEmbedding4D self) -> PyObject *"""
10637 return _IMP_algebra.LogEmbedding4D__get_as_binary(self)
10639 def _set_from_binary(self, p):
10640 r"""_set_from_binary(LogEmbedding4D self, PyObject * p)"""
10641 return _IMP_algebra.LogEmbedding4D__set_from_binary(self, p)
10643 def __getstate__(self):
10644 p = self._get_as_binary()
10645 if len(self.__dict__) > 1:
10646 d = self.__dict__.copy()
10651 def __setstate__(self, p):
10652 if not hasattr(self,
'this'):
10654 if isinstance(p, tuple):
10656 self.__dict__.update(d)
10657 return self._set_from_binary(p)
10659 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding4D
10662 _IMP_algebra.LogEmbedding4D_swigregister(LogEmbedding4D)
10663 class LogEmbedding5D(object):
10664 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 5 > class."""
10666 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10668 def __init__(self, *args):
10670 __init__(LogEmbedding5D self, Vector5D origin, Vector5D cell, Vector5D base) -> LogEmbedding5D
10671 __init__(LogEmbedding5D self, BoundingBox5D bb, Vector5D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding5D
10672 __init__(LogEmbedding5D self, Vector5D arg2, Vector5D arg3) -> LogEmbedding5D
10673 __init__(LogEmbedding5D self) -> LogEmbedding5D
10675 _IMP_algebra.LogEmbedding5D_swiginit(self, _IMP_algebra.new_LogEmbedding5D(*args))
10677 def set_origin(self, o):
10678 r"""set_origin(LogEmbedding5D self, Vector5D o)"""
10679 return _IMP_algebra.LogEmbedding5D_set_origin(self, o)
10681 def get_origin(self):
10682 r"""get_origin(LogEmbedding5D self) -> Vector5D"""
10683 return _IMP_algebra.LogEmbedding5D_get_origin(self)
10685 def get_dimension(self):
10686 r"""get_dimension(LogEmbedding5D self) -> unsigned int"""
10687 return _IMP_algebra.LogEmbedding5D_get_dimension(self)
10689 def set_unit_cell(self, *args):
10691 set_unit_cell(LogEmbedding5D self, Vector5D o, Vector5D base)
10692 set_unit_cell(LogEmbedding5D self, Vector5D o)
10694 return _IMP_algebra.LogEmbedding5D_set_unit_cell(self, *args)
10696 def get_unit_cell(self):
10697 r"""get_unit_cell(LogEmbedding5D self) -> Vector5D"""
10698 return _IMP_algebra.LogEmbedding5D_get_unit_cell(self)
10700 def get_extended_index(self, o):
10701 r"""get_extended_index(LogEmbedding5D self, Vector5D o) -> ExtendedGridIndex5D"""
10702 return _IMP_algebra.LogEmbedding5D_get_extended_index(self, o)
10705 r"""get_index(LogEmbedding5D self, Vector5D o) -> GridIndex5D"""
10706 return _IMP_algebra.LogEmbedding5D_get_index(self, o)
10708 def get_center(self, *args):
10710 get_center(LogEmbedding5D self, ExtendedGridIndex5D ei) -> Vector5D
10711 get_center(LogEmbedding5D self, GridIndex5D ei) -> Vector5D
10713 return _IMP_algebra.LogEmbedding5D_get_center(self, *args)
10715 def get_bounding_box(self, *args):
10717 get_bounding_box(LogEmbedding5D self, ExtendedGridIndex5D ei) -> BoundingBox5D
10718 get_bounding_box(LogEmbedding5D self, GridIndex5D ei) -> BoundingBox5D
10720 return _IMP_algebra.LogEmbedding5D_get_bounding_box(self, *args)
10722 def show(self, *args):
10723 r"""show(LogEmbedding5D self, _ostream out=std::cout)"""
10724 return _IMP_algebra.LogEmbedding5D_show(self, *args)
10727 r"""__str__(LogEmbedding5D self) -> std::string"""
10728 return _IMP_algebra.LogEmbedding5D___str__(self)
10730 def __repr__(self):
10731 r"""__repr__(LogEmbedding5D self) -> std::string"""
10732 return _IMP_algebra.LogEmbedding5D___repr__(self)
10734 def __cmp__(self, arg2):
10735 r"""__cmp__(LogEmbedding5D self, LogEmbedding5D arg2) -> int"""
10736 return _IMP_algebra.LogEmbedding5D___cmp__(self, arg2)
10738 def __eq__(self, arg2):
10739 r"""__eq__(LogEmbedding5D self, LogEmbedding5D arg2) -> bool"""
10740 return _IMP_algebra.LogEmbedding5D___eq__(self, arg2)
10742 def _get_as_binary(self):
10743 r"""_get_as_binary(LogEmbedding5D self) -> PyObject *"""
10744 return _IMP_algebra.LogEmbedding5D__get_as_binary(self)
10746 def _set_from_binary(self, p):
10747 r"""_set_from_binary(LogEmbedding5D self, PyObject * p)"""
10748 return _IMP_algebra.LogEmbedding5D__set_from_binary(self, p)
10750 def __getstate__(self):
10751 p = self._get_as_binary()
10752 if len(self.__dict__) > 1:
10753 d = self.__dict__.copy()
10758 def __setstate__(self, p):
10759 if not hasattr(self,
'this'):
10761 if isinstance(p, tuple):
10763 self.__dict__.update(d)
10764 return self._set_from_binary(p)
10766 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding5D
10769 _IMP_algebra.LogEmbedding5D_swigregister(LogEmbedding5D)
10770 class LogEmbedding6D(object):
10771 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 6 > class."""
10773 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10775 def __init__(self, *args):
10777 __init__(LogEmbedding6D self, Vector6D origin, Vector6D cell, Vector6D base) -> LogEmbedding6D
10778 __init__(LogEmbedding6D self, BoundingBox6D bb, Vector6D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding6D
10779 __init__(LogEmbedding6D self, Vector6D arg2, Vector6D arg3) -> LogEmbedding6D
10780 __init__(LogEmbedding6D self) -> LogEmbedding6D
10782 _IMP_algebra.LogEmbedding6D_swiginit(self, _IMP_algebra.new_LogEmbedding6D(*args))
10784 def set_origin(self, o):
10785 r"""set_origin(LogEmbedding6D self, Vector6D o)"""
10786 return _IMP_algebra.LogEmbedding6D_set_origin(self, o)
10788 def get_origin(self):
10789 r"""get_origin(LogEmbedding6D self) -> Vector6D"""
10790 return _IMP_algebra.LogEmbedding6D_get_origin(self)
10792 def get_dimension(self):
10793 r"""get_dimension(LogEmbedding6D self) -> unsigned int"""
10794 return _IMP_algebra.LogEmbedding6D_get_dimension(self)
10796 def set_unit_cell(self, *args):
10798 set_unit_cell(LogEmbedding6D self, Vector6D o, Vector6D base)
10799 set_unit_cell(LogEmbedding6D self, Vector6D o)
10801 return _IMP_algebra.LogEmbedding6D_set_unit_cell(self, *args)
10803 def get_unit_cell(self):
10804 r"""get_unit_cell(LogEmbedding6D self) -> Vector6D"""
10805 return _IMP_algebra.LogEmbedding6D_get_unit_cell(self)
10807 def get_extended_index(self, o):
10808 r"""get_extended_index(LogEmbedding6D self, Vector6D o) -> ExtendedGridIndex6D"""
10809 return _IMP_algebra.LogEmbedding6D_get_extended_index(self, o)
10812 r"""get_index(LogEmbedding6D self, Vector6D o) -> GridIndex6D"""
10813 return _IMP_algebra.LogEmbedding6D_get_index(self, o)
10815 def get_center(self, *args):
10817 get_center(LogEmbedding6D self, ExtendedGridIndex6D ei) -> Vector6D
10818 get_center(LogEmbedding6D self, GridIndex6D ei) -> Vector6D
10820 return _IMP_algebra.LogEmbedding6D_get_center(self, *args)
10822 def get_bounding_box(self, *args):
10824 get_bounding_box(LogEmbedding6D self, ExtendedGridIndex6D ei) -> BoundingBox6D
10825 get_bounding_box(LogEmbedding6D self, GridIndex6D ei) -> BoundingBox6D
10827 return _IMP_algebra.LogEmbedding6D_get_bounding_box(self, *args)
10829 def show(self, *args):
10830 r"""show(LogEmbedding6D self, _ostream out=std::cout)"""
10831 return _IMP_algebra.LogEmbedding6D_show(self, *args)
10834 r"""__str__(LogEmbedding6D self) -> std::string"""
10835 return _IMP_algebra.LogEmbedding6D___str__(self)
10837 def __repr__(self):
10838 r"""__repr__(LogEmbedding6D self) -> std::string"""
10839 return _IMP_algebra.LogEmbedding6D___repr__(self)
10841 def __cmp__(self, arg2):
10842 r"""__cmp__(LogEmbedding6D self, LogEmbedding6D arg2) -> int"""
10843 return _IMP_algebra.LogEmbedding6D___cmp__(self, arg2)
10845 def __eq__(self, arg2):
10846 r"""__eq__(LogEmbedding6D self, LogEmbedding6D arg2) -> bool"""
10847 return _IMP_algebra.LogEmbedding6D___eq__(self, arg2)
10849 def _get_as_binary(self):
10850 r"""_get_as_binary(LogEmbedding6D self) -> PyObject *"""
10851 return _IMP_algebra.LogEmbedding6D__get_as_binary(self)
10853 def _set_from_binary(self, p):
10854 r"""_set_from_binary(LogEmbedding6D self, PyObject * p)"""
10855 return _IMP_algebra.LogEmbedding6D__set_from_binary(self, p)
10857 def __getstate__(self):
10858 p = self._get_as_binary()
10859 if len(self.__dict__) > 1:
10860 d = self.__dict__.copy()
10865 def __setstate__(self, p):
10866 if not hasattr(self,
'this'):
10868 if isinstance(p, tuple):
10870 self.__dict__.update(d)
10871 return self._set_from_binary(p)
10873 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding6D
10876 _IMP_algebra.LogEmbedding6D_swigregister(LogEmbedding6D)
10877 class SpherePatch3D(_GeometricPrimitive3D):
10878 r"""Proxy of C++ IMP::algebra::SpherePatch3D class."""
10880 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10882 def __init__(self, *args):
10884 __init__(SpherePatch3D self) -> SpherePatch3D
10885 __init__(SpherePatch3D self, Sphere3D sph, Plane3D crossing_plane) -> SpherePatch3D
10887 _IMP_algebra.SpherePatch3D_swiginit(self, _IMP_algebra.new_SpherePatch3D(*args))
10889 def get_contains(self, p):
10890 r"""get_contains(SpherePatch3D self, Vector3D p) -> bool"""
10891 return _IMP_algebra.SpherePatch3D_get_contains(self, p)
10893 def get_plane(self):
10894 r"""get_plane(SpherePatch3D self) -> Plane3D"""
10895 return _IMP_algebra.SpherePatch3D_get_plane(self)
10897 def get_sphere(self):
10898 r"""get_sphere(SpherePatch3D self) -> Sphere3D"""
10899 return _IMP_algebra.SpherePatch3D_get_sphere(self)
10901 def show(self, *args):
10902 r"""show(SpherePatch3D self, _ostream out=std::cout)"""
10903 return _IMP_algebra.SpherePatch3D_show(self, *args)
10905 def get_boundary_point(self):
10906 r"""get_boundary_point(SpherePatch3D self) -> Vector3D"""
10907 return _IMP_algebra.SpherePatch3D_get_boundary_point(self)
10910 r"""__str__(SpherePatch3D self) -> std::string"""
10911 return _IMP_algebra.SpherePatch3D___str__(self)
10913 def __repr__(self):
10914 r"""__repr__(SpherePatch3D self) -> std::string"""
10915 return _IMP_algebra.SpherePatch3D___repr__(self)
10917 def _get_as_binary(self):
10918 r"""_get_as_binary(SpherePatch3D self) -> PyObject *"""
10919 return _IMP_algebra.SpherePatch3D__get_as_binary(self)
10921 def _set_from_binary(self, p):
10922 r"""_set_from_binary(SpherePatch3D self, PyObject * p)"""
10923 return _IMP_algebra.SpherePatch3D__set_from_binary(self, p)
10925 def __getstate__(self):
10926 p = self._get_as_binary()
10927 if len(self.__dict__) > 1:
10928 d = self.__dict__.copy()
10933 def __setstate__(self, p):
10934 if not hasattr(self,
'this'):
10936 if isinstance(p, tuple):
10938 self.__dict__.update(d)
10939 return self._set_from_binary(p)
10941 __swig_destroy__ = _IMP_algebra.delete_SpherePatch3D
10944 _IMP_algebra.SpherePatch3D_swigregister(SpherePatch3D)
10948 get_area(Plane3D g) -> double
10949 get_area(SpherePatch3D g) -> double
10951 return _IMP_algebra.get_area(*args)
10953 def get_sphere_patch_3d_geometry(g):
10954 r"""get_sphere_patch_3d_geometry(SpherePatch3D g) -> SpherePatch3D"""
10955 return _IMP_algebra.get_sphere_patch_3d_geometry(g)
10956 class Cone3D(_GeometricPrimitive3D):
10957 r"""Proxy of C++ IMP::algebra::Cone3D class."""
10959 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10961 def __init__(self, *args):
10963 __init__(Cone3D self) -> Cone3D
10964 __init__(Cone3D self, Segment3D s, double radius) -> Cone3D
10966 _IMP_algebra.Cone3D_swiginit(self, _IMP_algebra.new_Cone3D(*args))
10969 r"""get_tip(Cone3D self) -> Vector3D"""
10970 return _IMP_algebra.Cone3D_get_tip(self)
10972 def get_direction(self):
10973 r"""get_direction(Cone3D self) -> Vector3D"""
10974 return _IMP_algebra.Cone3D_get_direction(self)
10977 r"""get_height(Cone3D self) -> double"""
10978 return _IMP_algebra.Cone3D_get_height(self)
10981 r"""get_angle(Cone3D self) -> double"""
10982 return _IMP_algebra.Cone3D_get_angle(self)
10984 def get_radius(self):
10985 r"""get_radius(Cone3D self) -> double"""
10986 return _IMP_algebra.Cone3D_get_radius(self)
10988 def get_contains(self, v):
10989 r"""get_contains(Cone3D self, Vector3D v) -> bool"""
10990 return _IMP_algebra.Cone3D_get_contains(self, v)
10992 def get_base_plane(self):
10993 r"""get_base_plane(Cone3D self) -> Plane3D"""
10994 return _IMP_algebra.Cone3D_get_base_plane(self)
10996 def show(self, *args):
10997 r"""show(Cone3D self, _ostream out=std::cout)"""
10998 return _IMP_algebra.Cone3D_show(self, *args)
11001 r"""__str__(Cone3D self) -> std::string"""
11002 return _IMP_algebra.Cone3D___str__(self)
11004 def __repr__(self):
11005 r"""__repr__(Cone3D self) -> std::string"""
11006 return _IMP_algebra.Cone3D___repr__(self)
11008 def _get_as_binary(self):
11009 r"""_get_as_binary(Cone3D self) -> PyObject *"""
11010 return _IMP_algebra.Cone3D__get_as_binary(self)
11012 def _set_from_binary(self, p):
11013 r"""_set_from_binary(Cone3D self, PyObject * p)"""
11014 return _IMP_algebra.Cone3D__set_from_binary(self, p)
11016 def __getstate__(self):
11017 p = self._get_as_binary()
11018 if len(self.__dict__) > 1:
11019 d = self.__dict__.copy()
11024 def __setstate__(self, p):
11025 if not hasattr(self,
'this'):
11027 if isinstance(p, tuple):
11029 self.__dict__.update(d)
11030 return self._set_from_binary(p)
11032 __swig_destroy__ = _IMP_algebra.delete_Cone3D
11035 _IMP_algebra.Cone3D_swigregister(Cone3D)
11039 get_surface_area(BoundingBox3D g) -> double
11040 get_surface_area(Sphere3D g) -> double
11041 get_surface_area(Cylinder3D g) -> double
11042 get_surface_area(Ellipsoid3D g) -> double
11043 get_surface_area(Cone3D g) -> double
11045 return _IMP_algebra.get_surface_area(*args)
11049 get_volume(BoundingBox3D g) -> double
11050 get_volume(Sphere3D g) -> double
11051 get_volume(Cylinder3D g) -> double
11052 get_volume(Ellipsoid3D g) -> double
11053 get_volume(Cone3D g) -> double
11055 return _IMP_algebra.get_volume(*args)
11057 def get_cone_3d_geometry(g):
11058 r"""get_cone_3d_geometry(Cone3D g) -> Cone3D"""
11059 return _IMP_algebra.get_cone_3d_geometry(g)
11062 r"""write_pts(IMP::algebra::Vector3Ds const & vs, TextOutput out)"""
11063 return _IMP_algebra.write_pts(vs, out)
11066 r"""read_pts(TextInput input) -> IMP::algebra::Vector3Ds"""
11067 return _IMP_algebra.read_pts(input)
11070 r"""write_spheres(IMP::algebra::Sphere3Ds const & vs, TextOutput out)"""
11071 return _IMP_algebra.write_spheres(vs, out)
11074 r"""read_spheres(TextInput input) -> IMP::algebra::Sphere3Ds"""
11075 return _IMP_algebra.read_spheres(input)
11078 r"""get_random_vector_on_unit_sphere() -> Vector3D"""
11079 return _IMP_algebra.get_random_vector_on_unit_sphere()
11082 r"""get_grid_surface_cover(Cylinder3D cyl, int number_of_cycles, int number_of_points_on_cycle) -> IMP::algebra::Vector3Ds"""
11083 return _IMP_algebra.get_grid_surface_cover(cyl, number_of_cycles, number_of_points_on_cycle)
11086 r"""get_random_chain(unsigned int n, double r, Vector3D start=IMP::algebra::Vector3D(0, 0, 0), IMP::algebra::Sphere3Ds const & obstacles=IMP::algebra::Sphere3Ds()) -> IMP::algebra::Vector3Ds"""
11087 return _IMP_algebra.get_random_chain(*args)
11090 r"""reversed_read(void * dest, size_t size, size_t nitems, std::ifstream & f, bool reverse)"""
11091 return _IMP_algebra.reversed_read(dest, size, nitems, f, reverse)
11094 r"""reversed_write(void const * src, size_t size, size_t nitems, std::ofstream & f, bool reverse=False)"""
11095 return _IMP_algebra.reversed_write(src, size, nitems, f, reverse)
11098 r"""get_is_big_endian() -> bool"""
11099 return _IMP_algebra.get_is_big_endian()
11102 r"""get_is_little_endian() -> bool"""
11103 return _IMP_algebra.get_is_little_endian()
11107 get_shortest_segment(Segment3D s, Vector3D p) -> Segment3D
11108 get_shortest_segment(Segment3D sa, Segment3D sb) -> Segment3D
11110 return _IMP_algebra.get_shortest_segment(*args)
11112 r"""Proxy of C++ IMP::algebra::DynamicNearestNeighbor3D class."""
11114 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11116 def __init__(self, vs, query_estimate=1):
11117 r"""__init__(DynamicNearestNeighbor3D self, IMP::algebra::Vector3Ds const & vs, double query_estimate=1) -> DynamicNearestNeighbor3D"""
11118 _IMP_algebra.DynamicNearestNeighbor3D_swiginit(self, _IMP_algebra.new_DynamicNearestNeighbor3D(vs, query_estimate))
11120 def get_in_ball(self, id, distance):
11121 r"""get_in_ball(DynamicNearestNeighbor3D self, int id, double distance) -> IMP::Ints"""
11122 return _IMP_algebra.DynamicNearestNeighbor3D_get_in_ball(self, id, distance)
11124 def set_coordinates(self, id, nc):
11125 r"""set_coordinates(DynamicNearestNeighbor3D self, int id, Vector3D nc)"""
11126 return _IMP_algebra.DynamicNearestNeighbor3D_set_coordinates(self, id, nc)
11128 def get_version_info(self):
11129 r"""get_version_info(DynamicNearestNeighbor3D self) -> VersionInfo"""
11130 return _IMP_algebra.DynamicNearestNeighbor3D_get_version_info(self)
11131 __swig_destroy__ = _IMP_algebra.delete_DynamicNearestNeighbor3D
11134 r"""__str__(DynamicNearestNeighbor3D self) -> std::string"""
11135 return _IMP_algebra.DynamicNearestNeighbor3D___str__(self)
11137 def __repr__(self):
11138 r"""__repr__(DynamicNearestNeighbor3D self) -> std::string"""
11139 return _IMP_algebra.DynamicNearestNeighbor3D___repr__(self)
11143 return _object_cast_to_DynamicNearestNeighbor3D(o)
11147 _IMP_algebra.DynamicNearestNeighbor3D_swigregister(DynamicNearestNeighbor3D)
11149 r"""Proxy of C++ IMP::algebra::VectorKDMetric class."""
11151 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11153 def __init__(self, name):
11154 r"""__init__(VectorKDMetric self, std::string name) -> VectorKDMetric"""
11155 if self.__class__ == VectorKDMetric:
11159 _IMP_algebra.VectorKDMetric_swiginit(self, _IMP_algebra.new_VectorKDMetric(_self, name))
11161 if self.__class__ != VectorKDMetric:
11162 _director_objects.register(self)
11168 r"""get_distance(VectorKDMetric self, VectorKD a, VectorKD b) -> double"""
11169 return _IMP_algebra.VectorKDMetric_get_distance(self, a, b)
11172 r"""get_centroid(VectorKDMetric self, IMP::algebra::VectorKDs const & vs) -> VectorKD"""
11173 return _IMP_algebra.VectorKDMetric_get_centroid(self, vs)
11176 r"""__str__(VectorKDMetric self) -> std::string"""
11177 return _IMP_algebra.VectorKDMetric___str__(self)
11179 def __repr__(self):
11180 r"""__repr__(VectorKDMetric self) -> std::string"""
11181 return _IMP_algebra.VectorKDMetric___repr__(self)
11185 return _object_cast_to_VectorKDMetric(o)
11188 def do_show(self, out):
11193 return _object_cast_to_VectorKDMetric(o)
11195 __swig_destroy__ = _IMP_algebra.delete_VectorKDMetric
11196 def __disown__(self):
11198 _IMP_algebra.disown_VectorKDMetric(self)
11199 return weakref.proxy(self)
11201 def do_destroy(self):
11202 r"""do_destroy(VectorKDMetric self)"""
11203 return _IMP_algebra.VectorKDMetric_do_destroy(self)
11206 _IMP_algebra.VectorKDMetric_swigregister(VectorKDMetric)
11207 class EuclideanVectorKDMetric(VectorKDMetric):
11208 r"""Proxy of C++ IMP::algebra::EuclideanVectorKDMetric class."""
11210 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11212 def __init__(self, *args):
11213 r"""__init__(EuclideanVectorKDMetric self, std::string name="EuclideanVectorKDMetric%1%") -> EuclideanVectorKDMetric"""
11214 _IMP_algebra.EuclideanVectorKDMetric_swiginit(self, _IMP_algebra.new_EuclideanVectorKDMetric(*args))
11216 def get_version_info(self):
11217 r"""get_version_info(EuclideanVectorKDMetric self) -> VersionInfo"""
11218 return _IMP_algebra.EuclideanVectorKDMetric_get_version_info(self)
11219 __swig_destroy__ = _IMP_algebra.delete_EuclideanVectorKDMetric
11222 r"""__str__(EuclideanVectorKDMetric self) -> std::string"""
11223 return _IMP_algebra.EuclideanVectorKDMetric___str__(self)
11225 def __repr__(self):
11226 r"""__repr__(EuclideanVectorKDMetric self) -> std::string"""
11227 return _IMP_algebra.EuclideanVectorKDMetric___repr__(self)
11231 return _object_cast_to_EuclideanVectorKDMetric(o)
11234 def _get_as_binary(self):
11235 r"""_get_as_binary(EuclideanVectorKDMetric self) -> PyObject *"""
11236 return _IMP_algebra.EuclideanVectorKDMetric__get_as_binary(self)
11238 def _set_from_binary(self, p):
11239 r"""_set_from_binary(EuclideanVectorKDMetric self, PyObject * p)"""
11240 return _IMP_algebra.EuclideanVectorKDMetric__set_from_binary(self, p)
11242 def __getstate__(self):
11243 p = self._get_as_binary()
11244 if len(self.__dict__) > 1:
11245 d = self.__dict__.copy()
11250 def __setstate__(self, p):
11251 if not hasattr(self,
'this'):
11253 if isinstance(p, tuple):
11255 self.__dict__.update(d)
11256 return self._set_from_binary(p)
11260 _IMP_algebra.EuclideanVectorKDMetric_swigregister(EuclideanVectorKDMetric)
11261 class MaxVectorKDMetric(VectorKDMetric):
11262 r"""Proxy of C++ IMP::algebra::MaxVectorKDMetric class."""
11264 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11266 def __init__(self, *args):
11267 r"""__init__(MaxVectorKDMetric self, std::string name="MaxVectorKDMetric%1%") -> MaxVectorKDMetric"""
11268 _IMP_algebra.MaxVectorKDMetric_swiginit(self, _IMP_algebra.new_MaxVectorKDMetric(*args))
11270 def get_version_info(self):
11271 r"""get_version_info(MaxVectorKDMetric self) -> VersionInfo"""
11272 return _IMP_algebra.MaxVectorKDMetric_get_version_info(self)
11273 __swig_destroy__ = _IMP_algebra.delete_MaxVectorKDMetric
11276 r"""__str__(MaxVectorKDMetric self) -> std::string"""
11277 return _IMP_algebra.MaxVectorKDMetric___str__(self)
11279 def __repr__(self):
11280 r"""__repr__(MaxVectorKDMetric self) -> std::string"""
11281 return _IMP_algebra.MaxVectorKDMetric___repr__(self)
11285 return _object_cast_to_MaxVectorKDMetric(o)
11288 def _get_as_binary(self):
11289 r"""_get_as_binary(MaxVectorKDMetric self) -> PyObject *"""
11290 return _IMP_algebra.MaxVectorKDMetric__get_as_binary(self)
11292 def _set_from_binary(self, p):
11293 r"""_set_from_binary(MaxVectorKDMetric self, PyObject * p)"""
11294 return _IMP_algebra.MaxVectorKDMetric__set_from_binary(self, p)
11296 def __getstate__(self):
11297 p = self._get_as_binary()
11298 if len(self.__dict__) > 1:
11299 d = self.__dict__.copy()
11304 def __setstate__(self, p):
11305 if not hasattr(self,
'this'):
11307 if isinstance(p, tuple):
11309 self.__dict__.update(d)
11310 return self._set_from_binary(p)
11314 _IMP_algebra.MaxVectorKDMetric_swigregister(MaxVectorKDMetric)
11315 class Gaussian3D(_GeometricPrimitive3D):
11316 r"""Proxy of C++ IMP::algebra::Gaussian3D class."""
11318 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11320 def __init__(self, *args):
11322 __init__(Gaussian3D self) -> Gaussian3D
11323 __init__(Gaussian3D self, ReferenceFrame3D tr, Vector3D variances) -> Gaussian3D
11325 _IMP_algebra.Gaussian3D_swiginit(self, _IMP_algebra.new_Gaussian3D(*args))
11327 def get_reference_frame(self):
11328 r"""get_reference_frame(Gaussian3D self) -> ReferenceFrame3D"""
11329 return _IMP_algebra.Gaussian3D_get_reference_frame(self)
11331 def get_variances(self):
11332 r"""get_variances(Gaussian3D self) -> Vector3D"""
11333 return _IMP_algebra.Gaussian3D_get_variances(self)
11335 def get_center(self):
11336 r"""get_center(Gaussian3D self) -> Vector3D"""
11337 return _IMP_algebra.Gaussian3D_get_center(self)
11339 def show(self, *args):
11340 r"""show(Gaussian3D self, _ostream out=std::cout)"""
11341 return _IMP_algebra.Gaussian3D_show(self, *args)
11344 r"""__str__(Gaussian3D self) -> std::string"""
11345 return _IMP_algebra.Gaussian3D___str__(self)
11347 def __repr__(self):
11348 r"""__repr__(Gaussian3D self) -> std::string"""
11349 return _IMP_algebra.Gaussian3D___repr__(self)
11351 def _get_as_binary(self):
11352 r"""_get_as_binary(Gaussian3D self) -> PyObject *"""
11353 return _IMP_algebra.Gaussian3D__get_as_binary(self)
11355 def _set_from_binary(self, p):
11356 r"""_set_from_binary(Gaussian3D self, PyObject * p)"""
11357 return _IMP_algebra.Gaussian3D__set_from_binary(self, p)
11359 def __getstate__(self):
11360 p = self._get_as_binary()
11361 if len(self.__dict__) > 1:
11362 d = self.__dict__.copy()
11367 def __setstate__(self, p):
11368 if not hasattr(self,
'this'):
11370 if isinstance(p, tuple):
11372 self.__dict__.update(d)
11373 return self._set_from_binary(p)
11375 __swig_destroy__ = _IMP_algebra.delete_Gaussian3D
11378 _IMP_algebra.Gaussian3D_swigregister(Gaussian3D)
11381 r"""get_covariance(Gaussian3D g) -> Eigen::Matrix3d"""
11382 return _IMP_algebra.get_covariance(g)
11385 r"""get_gaussian_from_covariance(Eigen::Matrix3d const & covariance, Vector3D center) -> Gaussian3D"""
11386 return _IMP_algebra.get_gaussian_from_covariance(covariance, center)
11389 r"""get_rasterized(IMP::algebra::Gaussian3Ds const & gmm, IMP::Floats const & weights, double cell_width, BoundingBox3D bb) -> DenseDoubleGrid3D"""
11390 return _IMP_algebra.get_rasterized(gmm, weights, cell_width, bb)
11393 r"""get_rasterized_fast(IMP::algebra::Gaussian3Ds const & gmm, IMP::Floats const & weights, double cell_width, BoundingBox3D bb, double factor=2.5) -> DenseDoubleGrid3D"""
11394 return _IMP_algebra.get_rasterized_fast(gmm, weights, cell_width, bb, factor)
11396 def _pass_matrix_xf(m):
11397 r"""_pass_matrix_xf(Eigen::MatrixXf const & m) -> Eigen::MatrixXf"""
11398 return _IMP_algebra._pass_matrix_xf(m)
11400 def _pass_matrix_xd(m):
11401 r"""_pass_matrix_xd(Eigen::MatrixXd const & m) -> Eigen::MatrixXd"""
11402 return _IMP_algebra._pass_matrix_xd(m)
11404 def _pass_matrix_3d(m):
11405 r"""_pass_matrix_3d(Eigen::Matrix3d const & m) -> Eigen::Matrix3d"""
11406 return _IMP_algebra._pass_matrix_3d(m)
11408 def _pass_array_xd(m):
11409 r"""_pass_array_xd(Eigen::ArrayXXd const & m) -> Eigen::ArrayXXd"""
11410 return _IMP_algebra._pass_array_xd(m)
11412 def _pass_vector_xd(m):
11413 r"""_pass_vector_xd(Eigen::VectorXd const & m) -> Eigen::VectorXd"""
11414 return _IMP_algebra._pass_vector_xd(m)
11416 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 1 > class."""
11418 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11420 def __init__(self, vs, epsilon=0):
11421 r"""__init__(NearestNeighbor1D self, IMP::Vector< IMP::algebra::VectorD< 1 > > const & vs, double epsilon=0) -> NearestNeighbor1D"""
11422 _IMP_algebra.NearestNeighbor1D_swiginit(self, _IMP_algebra.new_NearestNeighbor1D(vs, epsilon))
11424 def set_query_log(self, fname):
11425 r"""set_query_log(NearestNeighbor1D self, std::string fname)"""
11426 return _IMP_algebra.NearestNeighbor1D_set_query_log(self, fname)
11428 def get_nearest_neighbor(self, *args):
11430 get_nearest_neighbor(NearestNeighbor1D self, Vector1D q) -> unsigned int
11431 get_nearest_neighbor(NearestNeighbor1D self, unsigned int i) -> unsigned int
11433 return _IMP_algebra.NearestNeighbor1D_get_nearest_neighbor(self, *args)
11435 def get_nearest_neighbors(self, *args):
11437 get_nearest_neighbors(NearestNeighbor1D self, unsigned int i, unsigned int k) -> IMP::Ints
11438 get_nearest_neighbors(NearestNeighbor1D self, Vector1D v, unsigned int k) -> IMP::Ints
11440 return _IMP_algebra.NearestNeighbor1D_get_nearest_neighbors(self, *args)
11442 def get_in_ball(self, *args):
11444 get_in_ball(NearestNeighbor1D self, unsigned int i, double distance) -> IMP::Ints
11445 get_in_ball(NearestNeighbor1D self, Vector1D pt, double distance) -> IMP::Ints
11447 return _IMP_algebra.NearestNeighbor1D_get_in_ball(self, *args)
11449 def get_version_info(self):
11450 r"""get_version_info(NearestNeighbor1D self) -> VersionInfo"""
11451 return _IMP_algebra.NearestNeighbor1D_get_version_info(self)
11452 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor1D
11455 r"""__str__(NearestNeighbor1D self) -> std::string"""
11456 return _IMP_algebra.NearestNeighbor1D___str__(self)
11458 def __repr__(self):
11459 r"""__repr__(NearestNeighbor1D self) -> std::string"""
11460 return _IMP_algebra.NearestNeighbor1D___repr__(self)
11464 return _object_cast_to_NearestNeighborD(o)
11468 _IMP_algebra.NearestNeighbor1D_swigregister(NearestNeighbor1D)
11470 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 2 > class."""
11472 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11474 def __init__(self, vs, epsilon=0):
11475 r"""__init__(NearestNeighbor2D self, IMP::Vector< IMP::algebra::VectorD< 2 > > const & vs, double epsilon=0) -> NearestNeighbor2D"""
11476 _IMP_algebra.NearestNeighbor2D_swiginit(self, _IMP_algebra.new_NearestNeighbor2D(vs, epsilon))
11478 def set_query_log(self, fname):
11479 r"""set_query_log(NearestNeighbor2D self, std::string fname)"""
11480 return _IMP_algebra.NearestNeighbor2D_set_query_log(self, fname)
11482 def get_nearest_neighbor(self, *args):
11484 get_nearest_neighbor(NearestNeighbor2D self, Vector2D q) -> unsigned int
11485 get_nearest_neighbor(NearestNeighbor2D self, unsigned int i) -> unsigned int
11487 return _IMP_algebra.NearestNeighbor2D_get_nearest_neighbor(self, *args)
11489 def get_nearest_neighbors(self, *args):
11491 get_nearest_neighbors(NearestNeighbor2D self, unsigned int i, unsigned int k) -> IMP::Ints
11492 get_nearest_neighbors(NearestNeighbor2D self, Vector2D v, unsigned int k) -> IMP::Ints
11494 return _IMP_algebra.NearestNeighbor2D_get_nearest_neighbors(self, *args)
11496 def get_in_ball(self, *args):
11498 get_in_ball(NearestNeighbor2D self, unsigned int i, double distance) -> IMP::Ints
11499 get_in_ball(NearestNeighbor2D self, Vector2D pt, double distance) -> IMP::Ints
11501 return _IMP_algebra.NearestNeighbor2D_get_in_ball(self, *args)
11503 def get_version_info(self):
11504 r"""get_version_info(NearestNeighbor2D self) -> VersionInfo"""
11505 return _IMP_algebra.NearestNeighbor2D_get_version_info(self)
11506 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor2D
11509 r"""__str__(NearestNeighbor2D self) -> std::string"""
11510 return _IMP_algebra.NearestNeighbor2D___str__(self)
11512 def __repr__(self):
11513 r"""__repr__(NearestNeighbor2D self) -> std::string"""
11514 return _IMP_algebra.NearestNeighbor2D___repr__(self)
11518 return _object_cast_to_NearestNeighborD(o)
11522 _IMP_algebra.NearestNeighbor2D_swigregister(NearestNeighbor2D)
11524 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 3 > class."""
11526 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11528 def __init__(self, vs, epsilon=0):
11529 r"""__init__(NearestNeighbor3D self, IMP::Vector< IMP::algebra::VectorD< 3 > > const & vs, double epsilon=0) -> NearestNeighbor3D"""
11530 _IMP_algebra.NearestNeighbor3D_swiginit(self, _IMP_algebra.new_NearestNeighbor3D(vs, epsilon))
11532 def set_query_log(self, fname):
11533 r"""set_query_log(NearestNeighbor3D self, std::string fname)"""
11534 return _IMP_algebra.NearestNeighbor3D_set_query_log(self, fname)
11536 def get_nearest_neighbor(self, *args):
11538 get_nearest_neighbor(NearestNeighbor3D self, Vector3D q) -> unsigned int
11539 get_nearest_neighbor(NearestNeighbor3D self, unsigned int i) -> unsigned int
11541 return _IMP_algebra.NearestNeighbor3D_get_nearest_neighbor(self, *args)
11543 def get_nearest_neighbors(self, *args):
11545 get_nearest_neighbors(NearestNeighbor3D self, unsigned int i, unsigned int k) -> IMP::Ints
11546 get_nearest_neighbors(NearestNeighbor3D self, Vector3D v, unsigned int k) -> IMP::Ints
11548 return _IMP_algebra.NearestNeighbor3D_get_nearest_neighbors(self, *args)
11550 def get_in_ball(self, *args):
11552 get_in_ball(NearestNeighbor3D self, unsigned int i, double distance) -> IMP::Ints
11553 get_in_ball(NearestNeighbor3D self, Vector3D pt, double distance) -> IMP::Ints
11555 return _IMP_algebra.NearestNeighbor3D_get_in_ball(self, *args)
11557 def get_version_info(self):
11558 r"""get_version_info(NearestNeighbor3D self) -> VersionInfo"""
11559 return _IMP_algebra.NearestNeighbor3D_get_version_info(self)
11560 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor3D
11563 r"""__str__(NearestNeighbor3D self) -> std::string"""
11564 return _IMP_algebra.NearestNeighbor3D___str__(self)
11566 def __repr__(self):
11567 r"""__repr__(NearestNeighbor3D self) -> std::string"""
11568 return _IMP_algebra.NearestNeighbor3D___repr__(self)
11572 return _object_cast_to_NearestNeighborD(o)
11576 _IMP_algebra.NearestNeighbor3D_swigregister(NearestNeighbor3D)
11578 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 4 > class."""
11580 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11582 def __init__(self, vs, epsilon=0):
11583 r"""__init__(NearestNeighbor4D self, IMP::Vector< IMP::algebra::VectorD< 4 > > const & vs, double epsilon=0) -> NearestNeighbor4D"""
11584 _IMP_algebra.NearestNeighbor4D_swiginit(self, _IMP_algebra.new_NearestNeighbor4D(vs, epsilon))
11586 def set_query_log(self, fname):
11587 r"""set_query_log(NearestNeighbor4D self, std::string fname)"""
11588 return _IMP_algebra.NearestNeighbor4D_set_query_log(self, fname)
11590 def get_nearest_neighbor(self, *args):
11592 get_nearest_neighbor(NearestNeighbor4D self, Vector4D q) -> unsigned int
11593 get_nearest_neighbor(NearestNeighbor4D self, unsigned int i) -> unsigned int
11595 return _IMP_algebra.NearestNeighbor4D_get_nearest_neighbor(self, *args)
11597 def get_nearest_neighbors(self, *args):
11599 get_nearest_neighbors(NearestNeighbor4D self, unsigned int i, unsigned int k) -> IMP::Ints
11600 get_nearest_neighbors(NearestNeighbor4D self, Vector4D v, unsigned int k) -> IMP::Ints
11602 return _IMP_algebra.NearestNeighbor4D_get_nearest_neighbors(self, *args)
11604 def get_in_ball(self, *args):
11606 get_in_ball(NearestNeighbor4D self, unsigned int i, double distance) -> IMP::Ints
11607 get_in_ball(NearestNeighbor4D self, Vector4D pt, double distance) -> IMP::Ints
11609 return _IMP_algebra.NearestNeighbor4D_get_in_ball(self, *args)
11611 def get_version_info(self):
11612 r"""get_version_info(NearestNeighbor4D self) -> VersionInfo"""
11613 return _IMP_algebra.NearestNeighbor4D_get_version_info(self)
11614 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor4D
11617 r"""__str__(NearestNeighbor4D self) -> std::string"""
11618 return _IMP_algebra.NearestNeighbor4D___str__(self)
11620 def __repr__(self):
11621 r"""__repr__(NearestNeighbor4D self) -> std::string"""
11622 return _IMP_algebra.NearestNeighbor4D___repr__(self)
11626 return _object_cast_to_NearestNeighborD(o)
11630 _IMP_algebra.NearestNeighbor4D_swigregister(NearestNeighbor4D)
11632 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 5 > class."""
11634 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11636 def __init__(self, vs, epsilon=0):
11637 r"""__init__(NearestNeighbor5D self, IMP::Vector< IMP::algebra::VectorD< 5 > > const & vs, double epsilon=0) -> NearestNeighbor5D"""
11638 _IMP_algebra.NearestNeighbor5D_swiginit(self, _IMP_algebra.new_NearestNeighbor5D(vs, epsilon))
11640 def set_query_log(self, fname):
11641 r"""set_query_log(NearestNeighbor5D self, std::string fname)"""
11642 return _IMP_algebra.NearestNeighbor5D_set_query_log(self, fname)
11644 def get_nearest_neighbor(self, *args):
11646 get_nearest_neighbor(NearestNeighbor5D self, Vector5D q) -> unsigned int
11647 get_nearest_neighbor(NearestNeighbor5D self, unsigned int i) -> unsigned int
11649 return _IMP_algebra.NearestNeighbor5D_get_nearest_neighbor(self, *args)
11651 def get_nearest_neighbors(self, *args):
11653 get_nearest_neighbors(NearestNeighbor5D self, unsigned int i, unsigned int k) -> IMP::Ints
11654 get_nearest_neighbors(NearestNeighbor5D self, Vector5D v, unsigned int k) -> IMP::Ints
11656 return _IMP_algebra.NearestNeighbor5D_get_nearest_neighbors(self, *args)
11658 def get_in_ball(self, *args):
11660 get_in_ball(NearestNeighbor5D self, unsigned int i, double distance) -> IMP::Ints
11661 get_in_ball(NearestNeighbor5D self, Vector5D pt, double distance) -> IMP::Ints
11663 return _IMP_algebra.NearestNeighbor5D_get_in_ball(self, *args)
11665 def get_version_info(self):
11666 r"""get_version_info(NearestNeighbor5D self) -> VersionInfo"""
11667 return _IMP_algebra.NearestNeighbor5D_get_version_info(self)
11668 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor5D
11671 r"""__str__(NearestNeighbor5D self) -> std::string"""
11672 return _IMP_algebra.NearestNeighbor5D___str__(self)
11674 def __repr__(self):
11675 r"""__repr__(NearestNeighbor5D self) -> std::string"""
11676 return _IMP_algebra.NearestNeighbor5D___repr__(self)
11680 return _object_cast_to_NearestNeighborD(o)
11684 _IMP_algebra.NearestNeighbor5D_swigregister(NearestNeighbor5D)
11686 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 6 > class."""
11688 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11690 def __init__(self, vs, epsilon=0):
11691 r"""__init__(NearestNeighbor6D self, IMP::Vector< IMP::algebra::VectorD< 6 > > const & vs, double epsilon=0) -> NearestNeighbor6D"""
11692 _IMP_algebra.NearestNeighbor6D_swiginit(self, _IMP_algebra.new_NearestNeighbor6D(vs, epsilon))
11694 def set_query_log(self, fname):
11695 r"""set_query_log(NearestNeighbor6D self, std::string fname)"""
11696 return _IMP_algebra.NearestNeighbor6D_set_query_log(self, fname)
11698 def get_nearest_neighbor(self, *args):
11700 get_nearest_neighbor(NearestNeighbor6D self, Vector6D q) -> unsigned int
11701 get_nearest_neighbor(NearestNeighbor6D self, unsigned int i) -> unsigned int
11703 return _IMP_algebra.NearestNeighbor6D_get_nearest_neighbor(self, *args)
11705 def get_nearest_neighbors(self, *args):
11707 get_nearest_neighbors(NearestNeighbor6D self, unsigned int i, unsigned int k) -> IMP::Ints
11708 get_nearest_neighbors(NearestNeighbor6D self, Vector6D v, unsigned int k) -> IMP::Ints
11710 return _IMP_algebra.NearestNeighbor6D_get_nearest_neighbors(self, *args)
11712 def get_in_ball(self, *args):
11714 get_in_ball(NearestNeighbor6D self, unsigned int i, double distance) -> IMP::Ints
11715 get_in_ball(NearestNeighbor6D self, Vector6D pt, double distance) -> IMP::Ints
11717 return _IMP_algebra.NearestNeighbor6D_get_in_ball(self, *args)
11719 def get_version_info(self):
11720 r"""get_version_info(NearestNeighbor6D self) -> VersionInfo"""
11721 return _IMP_algebra.NearestNeighbor6D_get_version_info(self)
11722 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor6D
11725 r"""__str__(NearestNeighbor6D self) -> std::string"""
11726 return _IMP_algebra.NearestNeighbor6D___str__(self)
11728 def __repr__(self):
11729 r"""__repr__(NearestNeighbor6D self) -> std::string"""
11730 return _IMP_algebra.NearestNeighbor6D___repr__(self)
11734 return _object_cast_to_NearestNeighborD(o)
11738 _IMP_algebra.NearestNeighbor6D_swigregister(NearestNeighbor6D)
11740 r"""Proxy of C++ IMP::algebra::NearestNeighborD< -1 > class."""
11742 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11744 def __init__(self, vs, epsilon=0):
11745 r"""__init__(NearestNeighborKD self, IMP::Vector< IMP::algebra::VectorD< -1 > > const & vs, double epsilon=0) -> NearestNeighborKD"""
11746 _IMP_algebra.NearestNeighborKD_swiginit(self, _IMP_algebra.new_NearestNeighborKD(vs, epsilon))
11748 def set_query_log(self, fname):
11749 r"""set_query_log(NearestNeighborKD self, std::string fname)"""
11750 return _IMP_algebra.NearestNeighborKD_set_query_log(self, fname)
11752 def get_nearest_neighbor(self, *args):
11754 get_nearest_neighbor(NearestNeighborKD self, VectorKD q) -> unsigned int
11755 get_nearest_neighbor(NearestNeighborKD self, unsigned int i) -> unsigned int
11757 return _IMP_algebra.NearestNeighborKD_get_nearest_neighbor(self, *args)
11759 def get_nearest_neighbors(self, *args):
11761 get_nearest_neighbors(NearestNeighborKD self, unsigned int i, unsigned int k) -> IMP::Ints
11762 get_nearest_neighbors(NearestNeighborKD self, VectorKD v, unsigned int k) -> IMP::Ints
11764 return _IMP_algebra.NearestNeighborKD_get_nearest_neighbors(self, *args)
11766 def get_in_ball(self, *args):
11768 get_in_ball(NearestNeighborKD self, unsigned int i, double distance) -> IMP::Ints
11769 get_in_ball(NearestNeighborKD self, VectorKD pt, double distance) -> IMP::Ints
11771 return _IMP_algebra.NearestNeighborKD_get_in_ball(self, *args)
11773 def get_version_info(self):
11774 r"""get_version_info(NearestNeighborKD self) -> VersionInfo"""
11775 return _IMP_algebra.NearestNeighborKD_get_version_info(self)
11776 __swig_destroy__ = _IMP_algebra.delete_NearestNeighborKD
11779 r"""__str__(NearestNeighborKD self) -> std::string"""
11780 return _IMP_algebra.NearestNeighborKD___str__(self)
11782 def __repr__(self):
11783 r"""__repr__(NearestNeighborKD self) -> std::string"""
11784 return _IMP_algebra.NearestNeighborKD___repr__(self)
11788 return _object_cast_to_NearestNeighborD(o)
11792 _IMP_algebra.NearestNeighborKD_swigregister(NearestNeighborKD)
11795 r"""get_transformation_aligning_pair(IMP::algebra::Vector2Ds const & set_from, IMP::algebra::Vector2Ds const & set_to) -> Transformation2D"""
11796 return _IMP_algebra.get_transformation_aligning_pair(set_from, set_to)
11797 class PrincipalComponentAnalysis1D(_GeometricPrimitive1D):
11798 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 1 > class."""
11800 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11802 def __init__(self, *args):
11804 __init__(PrincipalComponentAnalysis1D self) -> PrincipalComponentAnalysis1D
11805 __init__(PrincipalComponentAnalysis1D self, IMP::Vector< IMP::algebra::VectorD< 1 > > const & pcs, Vector1D values, Vector1D centroid) -> PrincipalComponentAnalysis1D
11807 _IMP_algebra.PrincipalComponentAnalysis1D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis1D(*args))
11810 r"""get_principal_components(PrincipalComponentAnalysis1D self) -> IMP::Vector< IMP::algebra::VectorD< 1 > >"""
11811 return _IMP_algebra.PrincipalComponentAnalysis1D_get_principal_components(self)
11813 def get_principal_component(self, i):
11814 r"""get_principal_component(PrincipalComponentAnalysis1D self, unsigned int i) -> Vector1D"""
11815 return _IMP_algebra.PrincipalComponentAnalysis1D_get_principal_component(self, i)
11817 def get_principal_values(self):
11818 r"""get_principal_values(PrincipalComponentAnalysis1D self) -> Vector1D"""
11819 return _IMP_algebra.PrincipalComponentAnalysis1D_get_principal_values(self)
11821 def get_principal_value(self, i):
11822 r"""get_principal_value(PrincipalComponentAnalysis1D self, unsigned int i) -> double"""
11823 return _IMP_algebra.PrincipalComponentAnalysis1D_get_principal_value(self, i)
11826 r"""get_centroid(PrincipalComponentAnalysis1D self) -> Vector1D"""
11827 return _IMP_algebra.PrincipalComponentAnalysis1D_get_centroid(self)
11829 def set_centroid(self, cntr):
11830 r"""set_centroid(PrincipalComponentAnalysis1D self, Vector1D cntr)"""
11831 return _IMP_algebra.PrincipalComponentAnalysis1D_set_centroid(self, cntr)
11833 def show(self, *args):
11834 r"""show(PrincipalComponentAnalysis1D self, _ostream out=std::cout)"""
11835 return _IMP_algebra.PrincipalComponentAnalysis1D_show(self, *args)
11837 def __cmp__(self, o):
11838 r"""__cmp__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> int"""
11839 return _IMP_algebra.PrincipalComponentAnalysis1D___cmp__(self, o)
11841 def __eq__(self, o):
11842 r"""__eq__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
11843 return _IMP_algebra.PrincipalComponentAnalysis1D___eq__(self, o)
11845 def __ne__(self, o):
11846 r"""__ne__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
11847 return _IMP_algebra.PrincipalComponentAnalysis1D___ne__(self, o)
11849 def __lt__(self, o):
11850 r"""__lt__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
11851 return _IMP_algebra.PrincipalComponentAnalysis1D___lt__(self, o)
11853 def __gt__(self, o):
11854 r"""__gt__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
11855 return _IMP_algebra.PrincipalComponentAnalysis1D___gt__(self, o)
11857 def __ge__(self, o):
11858 r"""__ge__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
11859 return _IMP_algebra.PrincipalComponentAnalysis1D___ge__(self, o)
11861 def __le__(self, o):
11862 r"""__le__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
11863 return _IMP_algebra.PrincipalComponentAnalysis1D___le__(self, o)
11866 r"""__str__(PrincipalComponentAnalysis1D self) -> std::string"""
11867 return _IMP_algebra.PrincipalComponentAnalysis1D___str__(self)
11869 def __repr__(self):
11870 r"""__repr__(PrincipalComponentAnalysis1D self) -> std::string"""
11871 return _IMP_algebra.PrincipalComponentAnalysis1D___repr__(self)
11873 def _get_as_binary(self):
11874 r"""_get_as_binary(PrincipalComponentAnalysis1D self) -> PyObject *"""
11875 return _IMP_algebra.PrincipalComponentAnalysis1D__get_as_binary(self)
11877 def _set_from_binary(self, p):
11878 r"""_set_from_binary(PrincipalComponentAnalysis1D self, PyObject * p)"""
11879 return _IMP_algebra.PrincipalComponentAnalysis1D__set_from_binary(self, p)
11881 def __getstate__(self):
11882 p = self._get_as_binary()
11883 if len(self.__dict__) > 1:
11884 d = self.__dict__.copy()
11889 def __setstate__(self, p):
11890 if not hasattr(self,
'this'):
11892 if isinstance(p, tuple):
11894 self.__dict__.update(d)
11895 return self._set_from_binary(p)
11897 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis1D
11900 _IMP_algebra.PrincipalComponentAnalysis1D_swigregister(PrincipalComponentAnalysis1D)
11901 class PrincipalComponentAnalysis2D(_GeometricPrimitive2D):
11902 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 2 > class."""
11904 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11906 def __init__(self, *args):
11908 __init__(PrincipalComponentAnalysis2D self) -> PrincipalComponentAnalysis2D
11909 __init__(PrincipalComponentAnalysis2D self, IMP::Vector< IMP::algebra::VectorD< 2 > > const & pcs, Vector2D values, Vector2D centroid) -> PrincipalComponentAnalysis2D
11911 _IMP_algebra.PrincipalComponentAnalysis2D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis2D(*args))
11914 r"""get_principal_components(PrincipalComponentAnalysis2D self) -> IMP::Vector< IMP::algebra::VectorD< 2 > >"""
11915 return _IMP_algebra.PrincipalComponentAnalysis2D_get_principal_components(self)
11917 def get_principal_component(self, i):
11918 r"""get_principal_component(PrincipalComponentAnalysis2D self, unsigned int i) -> Vector2D"""
11919 return _IMP_algebra.PrincipalComponentAnalysis2D_get_principal_component(self, i)
11921 def get_principal_values(self):
11922 r"""get_principal_values(PrincipalComponentAnalysis2D self) -> Vector2D"""
11923 return _IMP_algebra.PrincipalComponentAnalysis2D_get_principal_values(self)
11925 def get_principal_value(self, i):
11926 r"""get_principal_value(PrincipalComponentAnalysis2D self, unsigned int i) -> double"""
11927 return _IMP_algebra.PrincipalComponentAnalysis2D_get_principal_value(self, i)
11930 r"""get_centroid(PrincipalComponentAnalysis2D self) -> Vector2D"""
11931 return _IMP_algebra.PrincipalComponentAnalysis2D_get_centroid(self)
11933 def set_centroid(self, cntr):
11934 r"""set_centroid(PrincipalComponentAnalysis2D self, Vector2D cntr)"""
11935 return _IMP_algebra.PrincipalComponentAnalysis2D_set_centroid(self, cntr)
11937 def show(self, *args):
11938 r"""show(PrincipalComponentAnalysis2D self, _ostream out=std::cout)"""
11939 return _IMP_algebra.PrincipalComponentAnalysis2D_show(self, *args)
11941 def __cmp__(self, o):
11942 r"""__cmp__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> int"""
11943 return _IMP_algebra.PrincipalComponentAnalysis2D___cmp__(self, o)
11945 def __eq__(self, o):
11946 r"""__eq__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
11947 return _IMP_algebra.PrincipalComponentAnalysis2D___eq__(self, o)
11949 def __ne__(self, o):
11950 r"""__ne__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
11951 return _IMP_algebra.PrincipalComponentAnalysis2D___ne__(self, o)
11953 def __lt__(self, o):
11954 r"""__lt__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
11955 return _IMP_algebra.PrincipalComponentAnalysis2D___lt__(self, o)
11957 def __gt__(self, o):
11958 r"""__gt__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
11959 return _IMP_algebra.PrincipalComponentAnalysis2D___gt__(self, o)
11961 def __ge__(self, o):
11962 r"""__ge__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
11963 return _IMP_algebra.PrincipalComponentAnalysis2D___ge__(self, o)
11965 def __le__(self, o):
11966 r"""__le__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
11967 return _IMP_algebra.PrincipalComponentAnalysis2D___le__(self, o)
11970 r"""__str__(PrincipalComponentAnalysis2D self) -> std::string"""
11971 return _IMP_algebra.PrincipalComponentAnalysis2D___str__(self)
11973 def __repr__(self):
11974 r"""__repr__(PrincipalComponentAnalysis2D self) -> std::string"""
11975 return _IMP_algebra.PrincipalComponentAnalysis2D___repr__(self)
11977 def _get_as_binary(self):
11978 r"""_get_as_binary(PrincipalComponentAnalysis2D self) -> PyObject *"""
11979 return _IMP_algebra.PrincipalComponentAnalysis2D__get_as_binary(self)
11981 def _set_from_binary(self, p):
11982 r"""_set_from_binary(PrincipalComponentAnalysis2D self, PyObject * p)"""
11983 return _IMP_algebra.PrincipalComponentAnalysis2D__set_from_binary(self, p)
11985 def __getstate__(self):
11986 p = self._get_as_binary()
11987 if len(self.__dict__) > 1:
11988 d = self.__dict__.copy()
11993 def __setstate__(self, p):
11994 if not hasattr(self,
'this'):
11996 if isinstance(p, tuple):
11998 self.__dict__.update(d)
11999 return self._set_from_binary(p)
12001 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis2D
12004 _IMP_algebra.PrincipalComponentAnalysis2D_swigregister(PrincipalComponentAnalysis2D)
12005 class PrincipalComponentAnalysis3D(_GeometricPrimitive3D):
12006 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 3 > class."""
12008 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
12010 def __init__(self, *args):
12012 __init__(PrincipalComponentAnalysis3D self) -> PrincipalComponentAnalysis3D
12013 __init__(PrincipalComponentAnalysis3D self, IMP::Vector< IMP::algebra::VectorD< 3 > > const & pcs, Vector3D values, Vector3D centroid) -> PrincipalComponentAnalysis3D
12015 _IMP_algebra.PrincipalComponentAnalysis3D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis3D(*args))
12018 r"""get_principal_components(PrincipalComponentAnalysis3D self) -> IMP::Vector< IMP::algebra::VectorD< 3 > >"""
12019 return _IMP_algebra.PrincipalComponentAnalysis3D_get_principal_components(self)
12021 def get_principal_component(self, i):
12022 r"""get_principal_component(PrincipalComponentAnalysis3D self, unsigned int i) -> Vector3D"""
12023 return _IMP_algebra.PrincipalComponentAnalysis3D_get_principal_component(self, i)
12025 def get_principal_values(self):
12026 r"""get_principal_values(PrincipalComponentAnalysis3D self) -> Vector3D"""
12027 return _IMP_algebra.PrincipalComponentAnalysis3D_get_principal_values(self)
12029 def get_principal_value(self, i):
12030 r"""get_principal_value(PrincipalComponentAnalysis3D self, unsigned int i) -> double"""
12031 return _IMP_algebra.PrincipalComponentAnalysis3D_get_principal_value(self, i)
12034 r"""get_centroid(PrincipalComponentAnalysis3D self) -> Vector3D"""
12035 return _IMP_algebra.PrincipalComponentAnalysis3D_get_centroid(self)
12037 def set_centroid(self, cntr):
12038 r"""set_centroid(PrincipalComponentAnalysis3D self, Vector3D cntr)"""
12039 return _IMP_algebra.PrincipalComponentAnalysis3D_set_centroid(self, cntr)
12041 def show(self, *args):
12042 r"""show(PrincipalComponentAnalysis3D self, _ostream out=std::cout)"""
12043 return _IMP_algebra.PrincipalComponentAnalysis3D_show(self, *args)
12045 def __cmp__(self, o):
12046 r"""__cmp__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> int"""
12047 return _IMP_algebra.PrincipalComponentAnalysis3D___cmp__(self, o)
12049 def __eq__(self, o):
12050 r"""__eq__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
12051 return _IMP_algebra.PrincipalComponentAnalysis3D___eq__(self, o)
12053 def __ne__(self, o):
12054 r"""__ne__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
12055 return _IMP_algebra.PrincipalComponentAnalysis3D___ne__(self, o)
12057 def __lt__(self, o):
12058 r"""__lt__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
12059 return _IMP_algebra.PrincipalComponentAnalysis3D___lt__(self, o)
12061 def __gt__(self, o):
12062 r"""__gt__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
12063 return _IMP_algebra.PrincipalComponentAnalysis3D___gt__(self, o)
12065 def __ge__(self, o):
12066 r"""__ge__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
12067 return _IMP_algebra.PrincipalComponentAnalysis3D___ge__(self, o)
12069 def __le__(self, o):
12070 r"""__le__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
12071 return _IMP_algebra.PrincipalComponentAnalysis3D___le__(self, o)
12074 r"""__str__(PrincipalComponentAnalysis3D self) -> std::string"""
12075 return _IMP_algebra.PrincipalComponentAnalysis3D___str__(self)
12077 def __repr__(self):
12078 r"""__repr__(PrincipalComponentAnalysis3D self) -> std::string"""
12079 return _IMP_algebra.PrincipalComponentAnalysis3D___repr__(self)
12081 def _get_as_binary(self):
12082 r"""_get_as_binary(PrincipalComponentAnalysis3D self) -> PyObject *"""
12083 return _IMP_algebra.PrincipalComponentAnalysis3D__get_as_binary(self)
12085 def _set_from_binary(self, p):
12086 r"""_set_from_binary(PrincipalComponentAnalysis3D self, PyObject * p)"""
12087 return _IMP_algebra.PrincipalComponentAnalysis3D__set_from_binary(self, p)
12089 def __getstate__(self):
12090 p = self._get_as_binary()
12091 if len(self.__dict__) > 1:
12092 d = self.__dict__.copy()
12097 def __setstate__(self, p):
12098 if not hasattr(self,
'this'):
12100 if isinstance(p, tuple):
12102 self.__dict__.update(d)
12103 return self._set_from_binary(p)
12105 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis3D
12108 _IMP_algebra.PrincipalComponentAnalysis3D_swigregister(PrincipalComponentAnalysis3D)
12109 class PrincipalComponentAnalysis4D(_GeometricPrimitive4D):
12110 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 4 > class."""
12112 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
12114 def __init__(self, *args):
12116 __init__(PrincipalComponentAnalysis4D self) -> PrincipalComponentAnalysis4D
12117 __init__(PrincipalComponentAnalysis4D self, IMP::Vector< IMP::algebra::VectorD< 4 > > const & pcs, Vector4D values, Vector4D centroid) -> PrincipalComponentAnalysis4D
12119 _IMP_algebra.PrincipalComponentAnalysis4D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis4D(*args))
12122 r"""get_principal_components(PrincipalComponentAnalysis4D self) -> IMP::Vector< IMP::algebra::VectorD< 4 > >"""
12123 return _IMP_algebra.PrincipalComponentAnalysis4D_get_principal_components(self)
12125 def get_principal_component(self, i):
12126 r"""get_principal_component(PrincipalComponentAnalysis4D self, unsigned int i) -> Vector4D"""
12127 return _IMP_algebra.PrincipalComponentAnalysis4D_get_principal_component(self, i)
12129 def get_principal_values(self):
12130 r"""get_principal_values(PrincipalComponentAnalysis4D self) -> Vector4D"""
12131 return _IMP_algebra.PrincipalComponentAnalysis4D_get_principal_values(self)
12133 def get_principal_value(self, i):
12134 r"""get_principal_value(PrincipalComponentAnalysis4D self, unsigned int i) -> double"""
12135 return _IMP_algebra.PrincipalComponentAnalysis4D_get_principal_value(self, i)
12138 r"""get_centroid(PrincipalComponentAnalysis4D self) -> Vector4D"""
12139 return _IMP_algebra.PrincipalComponentAnalysis4D_get_centroid(self)
12141 def set_centroid(self, cntr):
12142 r"""set_centroid(PrincipalComponentAnalysis4D self, Vector4D cntr)"""
12143 return _IMP_algebra.PrincipalComponentAnalysis4D_set_centroid(self, cntr)
12145 def show(self, *args):
12146 r"""show(PrincipalComponentAnalysis4D self, _ostream out=std::cout)"""
12147 return _IMP_algebra.PrincipalComponentAnalysis4D_show(self, *args)
12149 def __cmp__(self, o):
12150 r"""__cmp__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> int"""
12151 return _IMP_algebra.PrincipalComponentAnalysis4D___cmp__(self, o)
12153 def __eq__(self, o):
12154 r"""__eq__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
12155 return _IMP_algebra.PrincipalComponentAnalysis4D___eq__(self, o)
12157 def __ne__(self, o):
12158 r"""__ne__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
12159 return _IMP_algebra.PrincipalComponentAnalysis4D___ne__(self, o)
12161 def __lt__(self, o):
12162 r"""__lt__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
12163 return _IMP_algebra.PrincipalComponentAnalysis4D___lt__(self, o)
12165 def __gt__(self, o):
12166 r"""__gt__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
12167 return _IMP_algebra.PrincipalComponentAnalysis4D___gt__(self, o)
12169 def __ge__(self, o):
12170 r"""__ge__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
12171 return _IMP_algebra.PrincipalComponentAnalysis4D___ge__(self, o)
12173 def __le__(self, o):
12174 r"""__le__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
12175 return _IMP_algebra.PrincipalComponentAnalysis4D___le__(self, o)
12178 r"""__str__(PrincipalComponentAnalysis4D self) -> std::string"""
12179 return _IMP_algebra.PrincipalComponentAnalysis4D___str__(self)
12181 def __repr__(self):
12182 r"""__repr__(PrincipalComponentAnalysis4D self) -> std::string"""
12183 return _IMP_algebra.PrincipalComponentAnalysis4D___repr__(self)
12185 def _get_as_binary(self):
12186 r"""_get_as_binary(PrincipalComponentAnalysis4D self) -> PyObject *"""
12187 return _IMP_algebra.PrincipalComponentAnalysis4D__get_as_binary(self)
12189 def _set_from_binary(self, p):
12190 r"""_set_from_binary(PrincipalComponentAnalysis4D self, PyObject * p)"""
12191 return _IMP_algebra.PrincipalComponentAnalysis4D__set_from_binary(self, p)
12193 def __getstate__(self):
12194 p = self._get_as_binary()
12195 if len(self.__dict__) > 1:
12196 d = self.__dict__.copy()
12201 def __setstate__(self, p):
12202 if not hasattr(self,
'this'):
12204 if isinstance(p, tuple):
12206 self.__dict__.update(d)
12207 return self._set_from_binary(p)
12209 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis4D
12212 _IMP_algebra.PrincipalComponentAnalysis4D_swigregister(PrincipalComponentAnalysis4D)
12213 class PrincipalComponentAnalysis5D(_GeometricPrimitive5D):
12214 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 5 > class."""
12216 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
12218 def __init__(self, *args):
12220 __init__(PrincipalComponentAnalysis5D self) -> PrincipalComponentAnalysis5D
12221 __init__(PrincipalComponentAnalysis5D self, IMP::Vector< IMP::algebra::VectorD< 5 > > const & pcs, Vector5D values, Vector5D centroid) -> PrincipalComponentAnalysis5D
12223 _IMP_algebra.PrincipalComponentAnalysis5D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis5D(*args))
12226 r"""get_principal_components(PrincipalComponentAnalysis5D self) -> IMP::Vector< IMP::algebra::VectorD< 5 > >"""
12227 return _IMP_algebra.PrincipalComponentAnalysis5D_get_principal_components(self)
12229 def get_principal_component(self, i):
12230 r"""get_principal_component(PrincipalComponentAnalysis5D self, unsigned int i) -> Vector5D"""
12231 return _IMP_algebra.PrincipalComponentAnalysis5D_get_principal_component(self, i)
12233 def get_principal_values(self):
12234 r"""get_principal_values(PrincipalComponentAnalysis5D self) -> Vector5D"""
12235 return _IMP_algebra.PrincipalComponentAnalysis5D_get_principal_values(self)
12237 def get_principal_value(self, i):
12238 r"""get_principal_value(PrincipalComponentAnalysis5D self, unsigned int i) -> double"""
12239 return _IMP_algebra.PrincipalComponentAnalysis5D_get_principal_value(self, i)
12242 r"""get_centroid(PrincipalComponentAnalysis5D self) -> Vector5D"""
12243 return _IMP_algebra.PrincipalComponentAnalysis5D_get_centroid(self)
12245 def set_centroid(self, cntr):
12246 r"""set_centroid(PrincipalComponentAnalysis5D self, Vector5D cntr)"""
12247 return _IMP_algebra.PrincipalComponentAnalysis5D_set_centroid(self, cntr)
12249 def show(self, *args):
12250 r"""show(PrincipalComponentAnalysis5D self, _ostream out=std::cout)"""
12251 return _IMP_algebra.PrincipalComponentAnalysis5D_show(self, *args)
12253 def __cmp__(self, o):
12254 r"""__cmp__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> int"""
12255 return _IMP_algebra.PrincipalComponentAnalysis5D___cmp__(self, o)
12257 def __eq__(self, o):
12258 r"""__eq__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
12259 return _IMP_algebra.PrincipalComponentAnalysis5D___eq__(self, o)
12261 def __ne__(self, o):
12262 r"""__ne__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
12263 return _IMP_algebra.PrincipalComponentAnalysis5D___ne__(self, o)
12265 def __lt__(self, o):
12266 r"""__lt__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
12267 return _IMP_algebra.PrincipalComponentAnalysis5D___lt__(self, o)
12269 def __gt__(self, o):
12270 r"""__gt__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
12271 return _IMP_algebra.PrincipalComponentAnalysis5D___gt__(self, o)
12273 def __ge__(self, o):
12274 r"""__ge__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
12275 return _IMP_algebra.PrincipalComponentAnalysis5D___ge__(self, o)
12277 def __le__(self, o):
12278 r"""__le__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
12279 return _IMP_algebra.PrincipalComponentAnalysis5D___le__(self, o)
12282 r"""__str__(PrincipalComponentAnalysis5D self) -> std::string"""
12283 return _IMP_algebra.PrincipalComponentAnalysis5D___str__(self)
12285 def __repr__(self):
12286 r"""__repr__(PrincipalComponentAnalysis5D self) -> std::string"""
12287 return _IMP_algebra.PrincipalComponentAnalysis5D___repr__(self)
12289 def _get_as_binary(self):
12290 r"""_get_as_binary(PrincipalComponentAnalysis5D self) -> PyObject *"""
12291 return _IMP_algebra.PrincipalComponentAnalysis5D__get_as_binary(self)
12293 def _set_from_binary(self, p):
12294 r"""_set_from_binary(PrincipalComponentAnalysis5D self, PyObject * p)"""
12295 return _IMP_algebra.PrincipalComponentAnalysis5D__set_from_binary(self, p)
12297 def __getstate__(self):
12298 p = self._get_as_binary()
12299 if len(self.__dict__) > 1:
12300 d = self.__dict__.copy()
12305 def __setstate__(self, p):
12306 if not hasattr(self,
'this'):
12308 if isinstance(p, tuple):
12310 self.__dict__.update(d)
12311 return self._set_from_binary(p)
12313 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis5D
12316 _IMP_algebra.PrincipalComponentAnalysis5D_swigregister(PrincipalComponentAnalysis5D)
12317 class PrincipalComponentAnalysis6D(_GeometricPrimitive6D):
12318 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 6 > class."""
12320 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
12322 def __init__(self, *args):
12324 __init__(PrincipalComponentAnalysis6D self) -> PrincipalComponentAnalysis6D
12325 __init__(PrincipalComponentAnalysis6D self, IMP::Vector< IMP::algebra::VectorD< 6 > > const & pcs, Vector6D values, Vector6D centroid) -> PrincipalComponentAnalysis6D
12327 _IMP_algebra.PrincipalComponentAnalysis6D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis6D(*args))
12330 r"""get_principal_components(PrincipalComponentAnalysis6D self) -> IMP::Vector< IMP::algebra::VectorD< 6 > >"""
12331 return _IMP_algebra.PrincipalComponentAnalysis6D_get_principal_components(self)
12333 def get_principal_component(self, i):
12334 r"""get_principal_component(PrincipalComponentAnalysis6D self, unsigned int i) -> Vector6D"""
12335 return _IMP_algebra.PrincipalComponentAnalysis6D_get_principal_component(self, i)
12337 def get_principal_values(self):
12338 r"""get_principal_values(PrincipalComponentAnalysis6D self) -> Vector6D"""
12339 return _IMP_algebra.PrincipalComponentAnalysis6D_get_principal_values(self)
12341 def get_principal_value(self, i):
12342 r"""get_principal_value(PrincipalComponentAnalysis6D self, unsigned int i) -> double"""
12343 return _IMP_algebra.PrincipalComponentAnalysis6D_get_principal_value(self, i)
12346 r"""get_centroid(PrincipalComponentAnalysis6D self) -> Vector6D"""
12347 return _IMP_algebra.PrincipalComponentAnalysis6D_get_centroid(self)
12349 def set_centroid(self, cntr):
12350 r"""set_centroid(PrincipalComponentAnalysis6D self, Vector6D cntr)"""
12351 return _IMP_algebra.PrincipalComponentAnalysis6D_set_centroid(self, cntr)
12353 def show(self, *args):
12354 r"""show(PrincipalComponentAnalysis6D self, _ostream out=std::cout)"""
12355 return _IMP_algebra.PrincipalComponentAnalysis6D_show(self, *args)
12357 def __cmp__(self, o):
12358 r"""__cmp__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> int"""
12359 return _IMP_algebra.PrincipalComponentAnalysis6D___cmp__(self, o)
12361 def __eq__(self, o):
12362 r"""__eq__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
12363 return _IMP_algebra.PrincipalComponentAnalysis6D___eq__(self, o)
12365 def __ne__(self, o):
12366 r"""__ne__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
12367 return _IMP_algebra.PrincipalComponentAnalysis6D___ne__(self, o)
12369 def __lt__(self, o):
12370 r"""__lt__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
12371 return _IMP_algebra.PrincipalComponentAnalysis6D___lt__(self, o)
12373 def __gt__(self, o):
12374 r"""__gt__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
12375 return _IMP_algebra.PrincipalComponentAnalysis6D___gt__(self, o)
12377 def __ge__(self, o):
12378 r"""__ge__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
12379 return _IMP_algebra.PrincipalComponentAnalysis6D___ge__(self, o)
12381 def __le__(self, o):
12382 r"""__le__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
12383 return _IMP_algebra.PrincipalComponentAnalysis6D___le__(self, o)
12386 r"""__str__(PrincipalComponentAnalysis6D self) -> std::string"""
12387 return _IMP_algebra.PrincipalComponentAnalysis6D___str__(self)
12389 def __repr__(self):
12390 r"""__repr__(PrincipalComponentAnalysis6D self) -> std::string"""
12391 return _IMP_algebra.PrincipalComponentAnalysis6D___repr__(self)
12393 def _get_as_binary(self):
12394 r"""_get_as_binary(PrincipalComponentAnalysis6D self) -> PyObject *"""
12395 return _IMP_algebra.PrincipalComponentAnalysis6D__get_as_binary(self)
12397 def _set_from_binary(self, p):
12398 r"""_set_from_binary(PrincipalComponentAnalysis6D self, PyObject * p)"""
12399 return _IMP_algebra.PrincipalComponentAnalysis6D__set_from_binary(self, p)
12401 def __getstate__(self):
12402 p = self._get_as_binary()
12403 if len(self.__dict__) > 1:
12404 d = self.__dict__.copy()
12409 def __setstate__(self, p):
12410 if not hasattr(self,
'this'):
12412 if isinstance(p, tuple):
12414 self.__dict__.update(d)
12415 return self._set_from_binary(p)
12417 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis6D
12420 _IMP_algebra.PrincipalComponentAnalysis6D_swigregister(PrincipalComponentAnalysis6D)
12421 class PrincipalComponentAnalysisKD(_GeometricPrimitiveKD):
12422 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< -1 > class."""
12424 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
12426 def __init__(self, *args):
12428 __init__(PrincipalComponentAnalysisKD self) -> PrincipalComponentAnalysisKD
12429 __init__(PrincipalComponentAnalysisKD self, IMP::Vector< IMP::algebra::VectorD< -1 > > const & pcs, VectorKD values, VectorKD centroid) -> PrincipalComponentAnalysisKD
12431 _IMP_algebra.PrincipalComponentAnalysisKD_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysisKD(*args))
12434 r"""get_principal_components(PrincipalComponentAnalysisKD self) -> IMP::Vector< IMP::algebra::VectorD< -1 > >"""
12435 return _IMP_algebra.PrincipalComponentAnalysisKD_get_principal_components(self)
12437 def get_principal_component(self, i):
12438 r"""get_principal_component(PrincipalComponentAnalysisKD self, unsigned int i) -> VectorKD"""
12439 return _IMP_algebra.PrincipalComponentAnalysisKD_get_principal_component(self, i)
12441 def get_principal_values(self):
12442 r"""get_principal_values(PrincipalComponentAnalysisKD self) -> VectorKD"""
12443 return _IMP_algebra.PrincipalComponentAnalysisKD_get_principal_values(self)
12445 def get_principal_value(self, i):
12446 r"""get_principal_value(PrincipalComponentAnalysisKD self, unsigned int i) -> double"""
12447 return _IMP_algebra.PrincipalComponentAnalysisKD_get_principal_value(self, i)
12450 r"""get_centroid(PrincipalComponentAnalysisKD self) -> VectorKD"""
12451 return _IMP_algebra.PrincipalComponentAnalysisKD_get_centroid(self)
12453 def set_centroid(self, cntr):
12454 r"""set_centroid(PrincipalComponentAnalysisKD self, VectorKD cntr)"""
12455 return _IMP_algebra.PrincipalComponentAnalysisKD_set_centroid(self, cntr)
12457 def show(self, *args):
12458 r"""show(PrincipalComponentAnalysisKD self, _ostream out=std::cout)"""
12459 return _IMP_algebra.PrincipalComponentAnalysisKD_show(self, *args)
12461 def __cmp__(self, o):
12462 r"""__cmp__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> int"""
12463 return _IMP_algebra.PrincipalComponentAnalysisKD___cmp__(self, o)
12465 def __eq__(self, o):
12466 r"""__eq__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
12467 return _IMP_algebra.PrincipalComponentAnalysisKD___eq__(self, o)
12469 def __ne__(self, o):
12470 r"""__ne__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
12471 return _IMP_algebra.PrincipalComponentAnalysisKD___ne__(self, o)
12473 def __lt__(self, o):
12474 r"""__lt__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
12475 return _IMP_algebra.PrincipalComponentAnalysisKD___lt__(self, o)
12477 def __gt__(self, o):
12478 r"""__gt__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
12479 return _IMP_algebra.PrincipalComponentAnalysisKD___gt__(self, o)
12481 def __ge__(self, o):
12482 r"""__ge__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
12483 return _IMP_algebra.PrincipalComponentAnalysisKD___ge__(self, o)
12485 def __le__(self, o):
12486 r"""__le__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
12487 return _IMP_algebra.PrincipalComponentAnalysisKD___le__(self, o)
12490 r"""__str__(PrincipalComponentAnalysisKD self) -> std::string"""
12491 return _IMP_algebra.PrincipalComponentAnalysisKD___str__(self)
12493 def __repr__(self):
12494 r"""__repr__(PrincipalComponentAnalysisKD self) -> std::string"""
12495 return _IMP_algebra.PrincipalComponentAnalysisKD___repr__(self)
12497 def _get_as_binary(self):
12498 r"""_get_as_binary(PrincipalComponentAnalysisKD self) -> PyObject *"""
12499 return _IMP_algebra.PrincipalComponentAnalysisKD__get_as_binary(self)
12501 def _set_from_binary(self, p):
12502 r"""_set_from_binary(PrincipalComponentAnalysisKD self, PyObject * p)"""
12503 return _IMP_algebra.PrincipalComponentAnalysisKD__set_from_binary(self, p)
12505 def __getstate__(self):
12506 p = self._get_as_binary()
12507 if len(self.__dict__) > 1:
12508 d = self.__dict__.copy()
12513 def __setstate__(self, p):
12514 if not hasattr(self,
'this'):
12516 if isinstance(p, tuple):
12518 self.__dict__.update(d)
12519 return self._set_from_binary(p)
12521 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysisKD
12524 _IMP_algebra.PrincipalComponentAnalysisKD_swigregister(PrincipalComponentAnalysisKD)
12528 get_principal_components(IMP::Vector< IMP::algebra::Vector1D,std::allocator< IMP::algebra::Vector1D > > const & a) -> PrincipalComponentAnalysis1D
12529 get_principal_components(IMP::Vector< IMP::algebra::Vector2D,std::allocator< IMP::algebra::Vector2D > > const & a) -> PrincipalComponentAnalysis2D
12530 get_principal_components(IMP::Vector< IMP::algebra::Vector3D,std::allocator< IMP::algebra::Vector3D > > const & a) -> PrincipalComponentAnalysis3D
12531 get_principal_components(IMP::Vector< IMP::algebra::Vector4D,std::allocator< IMP::algebra::Vector4D > > const & a) -> PrincipalComponentAnalysis4D
12532 get_principal_components(IMP::Vector< IMP::algebra::Vector5D,std::allocator< IMP::algebra::Vector5D > > const & a) -> PrincipalComponentAnalysis5D
12533 get_principal_components(IMP::Vector< IMP::algebra::Vector6D,std::allocator< IMP::algebra::Vector6D > > const & a) -> PrincipalComponentAnalysis6D
12534 get_principal_components(IMP::Vector< IMP::algebra::VectorKD,std::allocator< IMP::algebra::VectorKD > > const & a) -> PrincipalComponentAnalysisKD
12536 return _IMP_algebra.get_principal_components(*args)
12540 get_distance(Rotation3D r0, Rotation3D r1) -> double
12541 get_distance(Line3D s, Vector3D p) -> double
12542 get_distance(Line3D a, Line3D b) -> double
12543 get_distance(Segment3D s, Vector3D p) -> double
12544 get_distance(Segment3D a, Segment3D b) -> double
12545 get_distance(Plane3D pln, Vector3D p) -> double
12546 get_distance(Vector1D a, Vector1D b) -> double
12547 get_distance(Vector2D a, Vector2D b) -> double
12548 get_distance(Vector3D a, Vector3D b) -> double
12549 get_distance(Vector4D a, Vector4D b) -> double
12550 get_distance(Vector5D a, Vector5D b) -> double
12551 get_distance(Vector6D a, Vector6D b) -> double
12552 get_distance(VectorKD a, VectorKD b) -> double
12553 get_distance(Sphere1D a, Sphere1D b) -> double
12554 get_distance(Sphere2D a, Sphere2D b) -> double
12555 get_distance(Sphere3D a, Sphere3D b) -> double
12556 get_distance(Sphere4D a, Sphere4D b) -> double
12557 get_distance(Sphere5D a, Sphere5D b) -> double
12558 get_distance(Sphere6D a, Sphere6D b) -> double
12559 get_distance(SphereKD a, SphereKD b) -> double
12561 return _IMP_algebra.get_distance(*args)
12565 get_squared_distance(Vector1D a, Vector1D b) -> double
12566 get_squared_distance(Vector2D a, Vector2D b) -> double
12567 get_squared_distance(Vector3D a, Vector3D b) -> double
12568 get_squared_distance(Vector4D a, Vector4D b) -> double
12569 get_squared_distance(Vector5D a, Vector5D b) -> double
12570 get_squared_distance(Vector6D a, Vector6D b) -> double
12571 get_squared_distance(VectorKD a, VectorKD b) -> double
12573 return _IMP_algebra.get_squared_distance(*args)
12575 def get_basis_vector_1d(coordinate):
12576 r"""get_basis_vector_1d(unsigned int coordinate) -> Vector1D"""
12577 return _IMP_algebra.get_basis_vector_1d(coordinate)
12579 def get_basis_vector_2d(coordinate):
12580 r"""get_basis_vector_2d(unsigned int coordinate) -> Vector2D"""
12581 return _IMP_algebra.get_basis_vector_2d(coordinate)
12583 def get_basis_vector_3d(coordinate):
12584 r"""get_basis_vector_3d(unsigned int coordinate) -> Vector3D"""
12585 return _IMP_algebra.get_basis_vector_3d(coordinate)
12587 def get_basis_vector_4d(coordinate):
12588 r"""get_basis_vector_4d(unsigned int coordinate) -> Vector4D"""
12589 return _IMP_algebra.get_basis_vector_4d(coordinate)
12591 def get_basis_vector_5d(coordinate):
12592 r"""get_basis_vector_5d(unsigned int coordinate) -> Vector5D"""
12593 return _IMP_algebra.get_basis_vector_5d(coordinate)
12595 def get_basis_vector_6d(coordinate):
12596 r"""get_basis_vector_6d(unsigned int coordinate) -> Vector6D"""
12597 return _IMP_algebra.get_basis_vector_6d(coordinate)
12599 def get_zero_vector_1d():
12600 r"""get_zero_vector_1d() -> Vector1D"""
12601 return _IMP_algebra.get_zero_vector_1d()
12603 def get_zero_vector_2d():
12604 r"""get_zero_vector_2d() -> Vector2D"""
12605 return _IMP_algebra.get_zero_vector_2d()
12607 def get_zero_vector_3d():
12608 r"""get_zero_vector_3d() -> Vector3D"""
12609 return _IMP_algebra.get_zero_vector_3d()
12611 def get_zero_vector_4d():
12612 r"""get_zero_vector_4d() -> Vector4D"""
12613 return _IMP_algebra.get_zero_vector_4d()
12615 def get_zero_vector_5d():
12616 r"""get_zero_vector_5d() -> Vector5D"""
12617 return _IMP_algebra.get_zero_vector_5d()
12619 def get_zero_vector_6d():
12620 r"""get_zero_vector_6d() -> Vector6D"""
12621 return _IMP_algebra.get_zero_vector_6d()
12623 def get_ones_vector_1d(v=1):
12624 r"""get_ones_vector_1d(double v=1) -> Vector1D"""
12625 return _IMP_algebra.get_ones_vector_1d(v)
12627 def get_ones_vector_2d(v=1):
12628 r"""get_ones_vector_2d(double v=1) -> Vector2D"""
12629 return _IMP_algebra.get_ones_vector_2d(v)
12631 def get_ones_vector_3d(v=1):
12632 r"""get_ones_vector_3d(double v=1) -> Vector3D"""
12633 return _IMP_algebra.get_ones_vector_3d(v)
12635 def get_ones_vector_4d(v=1):
12636 r"""get_ones_vector_4d(double v=1) -> Vector4D"""
12637 return _IMP_algebra.get_ones_vector_4d(v)
12639 def get_ones_vector_5d(v=1):
12640 r"""get_ones_vector_5d(double v=1) -> Vector5D"""
12641 return _IMP_algebra.get_ones_vector_5d(v)
12643 def get_ones_vector_6d(v=1):
12644 r"""get_ones_vector_6d(double v=1) -> Vector6D"""
12645 return _IMP_algebra.get_ones_vector_6d(v)
12647 def get_unit_bounding_box_1d():
12648 r"""get_unit_bounding_box_1d() -> BoundingBox1D"""
12649 return _IMP_algebra.get_unit_bounding_box_1d()
12651 def get_unit_bounding_box_2d():
12652 r"""get_unit_bounding_box_2d() -> BoundingBox2D"""
12653 return _IMP_algebra.get_unit_bounding_box_2d()
12655 def get_unit_bounding_box_3d():
12656 r"""get_unit_bounding_box_3d() -> BoundingBox3D"""
12657 return _IMP_algebra.get_unit_bounding_box_3d()
12659 def get_unit_bounding_box_4d():
12660 r"""get_unit_bounding_box_4d() -> BoundingBox4D"""
12661 return _IMP_algebra.get_unit_bounding_box_4d()
12663 def get_unit_bounding_box_5d():
12664 r"""get_unit_bounding_box_5d() -> BoundingBox5D"""
12665 return _IMP_algebra.get_unit_bounding_box_5d()
12667 def get_unit_bounding_box_6d():
12668 r"""get_unit_bounding_box_6d() -> BoundingBox6D"""
12669 return _IMP_algebra.get_unit_bounding_box_6d()
12671 def get_cube_1d(radius):
12672 r"""get_cube_1d(double radius) -> BoundingBox1D"""
12673 return _IMP_algebra.get_cube_1d(radius)
12675 def get_cube_2d(radius):
12676 r"""get_cube_2d(double radius) -> BoundingBox2D"""
12677 return _IMP_algebra.get_cube_2d(radius)
12679 def get_cube_3d(radius):
12680 r"""get_cube_3d(double radius) -> BoundingBox3D"""
12681 return _IMP_algebra.get_cube_3d(radius)
12683 def get_cube_4d(radius):
12684 r"""get_cube_4d(double radius) -> BoundingBox4D"""
12685 return _IMP_algebra.get_cube_4d(radius)
12687 def get_cube_5d(radius):
12688 r"""get_cube_5d(double radius) -> BoundingBox5D"""
12689 return _IMP_algebra.get_cube_5d(radius)
12691 def get_cube_6d(radius):
12692 r"""get_cube_6d(double radius) -> BoundingBox6D"""
12693 return _IMP_algebra.get_cube_6d(radius)
12695 def get_unit_sphere_1d():
12696 r"""get_unit_sphere_1d() -> Sphere1D"""
12697 return _IMP_algebra.get_unit_sphere_1d()
12699 def get_unit_sphere_2d():
12700 r"""get_unit_sphere_2d() -> Sphere2D"""
12701 return _IMP_algebra.get_unit_sphere_2d()
12703 def get_unit_sphere_3d():
12704 r"""get_unit_sphere_3d() -> Sphere3D"""
12705 return _IMP_algebra.get_unit_sphere_3d()
12707 def get_unit_sphere_4d():
12708 r"""get_unit_sphere_4d() -> Sphere4D"""
12709 return _IMP_algebra.get_unit_sphere_4d()
12711 def get_unit_sphere_5d():
12712 r"""get_unit_sphere_5d() -> Sphere5D"""
12713 return _IMP_algebra.get_unit_sphere_5d()
12715 def get_unit_sphere_6d():
12716 r"""get_unit_sphere_6d() -> Sphere6D"""
12717 return _IMP_algebra.get_unit_sphere_6d()
12721 get_interiors_intersect(Sphere1D a, Sphere1D b) -> bool
12722 get_interiors_intersect(Sphere2D a, Sphere2D b) -> bool
12723 get_interiors_intersect(Sphere3D a, Sphere3D b) -> bool
12724 get_interiors_intersect(Sphere4D a, Sphere4D b) -> bool
12725 get_interiors_intersect(Sphere5D a, Sphere5D b) -> bool
12726 get_interiors_intersect(Sphere6D a, Sphere6D b) -> bool
12727 get_interiors_intersect(SphereKD a, SphereKD b) -> bool
12728 get_interiors_intersect(BoundingBox1D a, BoundingBox1D b) -> bool
12729 get_interiors_intersect(BoundingBox2D a, BoundingBox2D b) -> bool
12730 get_interiors_intersect(BoundingBox3D a, BoundingBox3D b) -> bool
12731 get_interiors_intersect(BoundingBox4D a, BoundingBox4D b) -> bool
12732 get_interiors_intersect(BoundingBox5D a, BoundingBox5D b) -> bool
12733 get_interiors_intersect(BoundingBox6D a, BoundingBox6D b) -> bool
12734 get_interiors_intersect(BoundingBoxKD a, BoundingBoxKD b) -> bool
12736 return _IMP_algebra.get_interiors_intersect(*args)
12740 get_random_vector_on(Sphere1D a) -> Vector1D
12741 get_random_vector_on(Sphere2D a) -> Vector2D
12742 get_random_vector_on(Sphere3D a) -> Vector3D
12743 get_random_vector_on(Sphere4D a) -> Vector4D
12744 get_random_vector_on(Sphere5D a) -> Vector5D
12745 get_random_vector_on(Sphere6D a) -> Vector6D
12746 get_random_vector_on(SphereKD a) -> VectorKD
12747 get_random_vector_on(UnitSimplex1D a) -> Vector1D
12748 get_random_vector_on(UnitSimplex2D a) -> Vector2D
12749 get_random_vector_on(UnitSimplex3D a) -> Vector3D
12750 get_random_vector_on(UnitSimplex4D a) -> Vector4D
12751 get_random_vector_on(UnitSimplex5D a) -> Vector5D
12752 get_random_vector_on(UnitSimplex6D a) -> Vector6D
12753 get_random_vector_on(UnitSimplexKD a) -> VectorKD
12754 get_random_vector_on(BoundingBox1D a) -> Vector1D
12755 get_random_vector_on(BoundingBox2D a) -> Vector2D
12756 get_random_vector_on(BoundingBox3D a) -> Vector3D
12757 get_random_vector_on(BoundingBox4D a) -> Vector4D
12758 get_random_vector_on(BoundingBox5D a) -> Vector5D
12759 get_random_vector_on(BoundingBox6D a) -> Vector6D
12760 get_random_vector_on(BoundingBoxKD a) -> VectorKD
12762 return _IMP_algebra.get_random_vector_on(*args)
12766 get_random_vector_in(Cylinder3D c) -> Vector3D
12767 get_random_vector_in(Sphere1D a) -> Vector1D
12768 get_random_vector_in(Sphere2D a) -> Vector2D
12769 get_random_vector_in(Sphere3D a) -> Vector3D
12770 get_random_vector_in(Sphere4D a) -> Vector4D
12771 get_random_vector_in(Sphere5D a) -> Vector5D
12772 get_random_vector_in(Sphere6D a) -> Vector6D
12773 get_random_vector_in(SphereKD a) -> VectorKD
12774 get_random_vector_in(BoundingBox1D a) -> Vector1D
12775 get_random_vector_in(BoundingBox2D a) -> Vector2D
12776 get_random_vector_in(BoundingBox3D a) -> Vector3D
12777 get_random_vector_in(BoundingBox4D a) -> Vector4D
12778 get_random_vector_in(BoundingBox5D a) -> Vector5D
12779 get_random_vector_in(BoundingBox6D a) -> Vector6D
12780 get_random_vector_in(BoundingBoxKD a) -> VectorKD
12782 return _IMP_algebra.get_random_vector_in(*args)
12786 get_intersection(BoundingBox1D a, BoundingBox1D b) -> BoundingBox1D
12787 get_intersection(BoundingBox2D a, BoundingBox2D b) -> BoundingBox2D
12788 get_intersection(BoundingBox3D a, BoundingBox3D b) -> BoundingBox3D
12789 get_intersection(BoundingBox4D a, BoundingBox4D b) -> BoundingBox4D
12790 get_intersection(BoundingBox5D a, BoundingBox5D b) -> BoundingBox5D
12791 get_intersection(BoundingBox6D a, BoundingBox6D b) -> BoundingBox6D
12792 get_intersection(BoundingBoxKD a, BoundingBoxKD b) -> BoundingBoxKD
12794 return _IMP_algebra.get_intersection(*args)
12798 get_union(BoundingBox1D a, BoundingBox1D b) -> BoundingBox1D
12799 get_union(BoundingBox2D a, BoundingBox2D b) -> BoundingBox2D
12800 get_union(BoundingBox3D a, BoundingBox3D b) -> BoundingBox3D
12801 get_union(BoundingBox4D a, BoundingBox4D b) -> BoundingBox4D
12802 get_union(BoundingBox5D a, BoundingBox5D b) -> BoundingBox5D
12803 get_union(BoundingBox6D a, BoundingBox6D b) -> BoundingBox6D
12804 get_union(BoundingBoxKD a, BoundingBoxKD b) -> BoundingBoxKD
12806 return _IMP_algebra.get_union(*args)
12808 def get_bounding_box(*args):
12810 get_bounding_box(Line3D g) -> BoundingBox3D
12811 get_bounding_box(Segment3D g) -> BoundingBox3D
12812 get_bounding_box(Plane3D g) -> BoundingBox3D
12813 get_bounding_box(Cylinder3D g) -> BoundingBox3D
12814 get_bounding_box(Ellipsoid3D g) -> BoundingBox3D
12815 get_bounding_box(SpherePatch3D g) -> BoundingBox3D
12816 get_bounding_box(Cone3D g) -> BoundingBox3D
12817 get_bounding_box(Sphere1D a) -> BoundingBox1D
12818 get_bounding_box(Sphere2D a) -> BoundingBox2D
12819 get_bounding_box(Sphere3D a) -> BoundingBox3D
12820 get_bounding_box(Sphere4D a) -> BoundingBox4D
12821 get_bounding_box(Sphere5D a) -> BoundingBox5D
12822 get_bounding_box(Sphere6D a) -> BoundingBox6D
12823 get_bounding_box(SphereKD a) -> BoundingBoxKD
12825 return _IMP_algebra.get_bounding_box(*args)
12829 get_uniform_surface_cover(Cylinder3D cyl, int number_of_points) -> IMP::algebra::Vector3Ds
12830 get_uniform_surface_cover(SpherePatch3D sph, unsigned int number_of_points) -> IMP::algebra::Vector3Ds
12831 get_uniform_surface_cover(Cone3D cone, unsigned int number_of_points) -> IMP::algebra::Vector3Ds
12832 get_uniform_surface_cover(IMP::algebra::Sphere3Ds const & _in, double points_per_square_angstrom) -> IMP::algebra::Vector3Ds
12833 get_uniform_surface_cover(Sphere1D a, unsigned int const & b) -> IMP::algebra::Vector1Ds
12834 get_uniform_surface_cover(Sphere2D a, unsigned int const & b) -> IMP::algebra::Vector2Ds
12835 get_uniform_surface_cover(Sphere3D a, unsigned int const & b) -> IMP::algebra::Vector3Ds
12836 get_uniform_surface_cover(Sphere4D a, unsigned int const & b) -> IMP::algebra::Vector4Ds
12837 get_uniform_surface_cover(Sphere5D a, unsigned int const & b) -> IMP::algebra::Vector5Ds
12838 get_uniform_surface_cover(Sphere6D a, unsigned int const & b) -> IMP::algebra::Vector6Ds
12839 get_uniform_surface_cover(SphereKD a, unsigned int const & b) -> IMP::algebra::VectorKDs
12841 return _IMP_algebra.get_uniform_surface_cover(*args)
12845 get_grid_interior_cover_by_spacing(BoundingBox1D a, double const & b) -> IMP::algebra::Vector1Ds
12846 get_grid_interior_cover_by_spacing(BoundingBox2D a, double const & b) -> IMP::algebra::Vector2Ds
12847 get_grid_interior_cover_by_spacing(BoundingBox3D a, double const & b) -> IMP::algebra::Vector3Ds
12848 get_grid_interior_cover_by_spacing(BoundingBox4D a, double const & b) -> IMP::algebra::Vector4Ds
12849 get_grid_interior_cover_by_spacing(BoundingBox5D a, double const & b) -> IMP::algebra::Vector5Ds
12850 get_grid_interior_cover_by_spacing(BoundingBox6D a, double const & b) -> IMP::algebra::Vector6Ds
12851 get_grid_interior_cover_by_spacing(BoundingBoxKD a, double const & b) -> IMP::algebra::VectorKDs
12853 return _IMP_algebra.get_grid_interior_cover_by_spacing(*args)
12857 get_projected(Line3D l, Vector3D p) -> Vector3D
12858 get_projected(Line3D l, Segment3D s) -> Segment3D
12859 get_projected(UnitSimplex1D a, Vector1D b) -> Vector1D
12860 get_projected(UnitSimplex2D a, Vector2D b) -> Vector2D
12861 get_projected(UnitSimplex3D a, Vector3D b) -> Vector3D
12862 get_projected(UnitSimplex4D a, Vector4D b) -> Vector4D
12863 get_projected(UnitSimplex5D a, Vector5D b) -> Vector5D
12864 get_projected(UnitSimplex6D a, Vector6D b) -> Vector6D
12865 get_projected(UnitSimplexKD a, VectorKD b) -> VectorKD
12867 return _IMP_algebra.get_projected(*args)
12871 get_vertices(BoundingBox1D a) -> IMP::Vector< IMP::algebra::Vector1D,std::allocator< IMP::algebra::Vector1D > >
12872 get_vertices(BoundingBox2D a) -> IMP::Vector< IMP::algebra::Vector2D,std::allocator< IMP::algebra::Vector2D > >
12873 get_vertices(BoundingBox3D a) -> IMP::Vector< IMP::algebra::Vector3D,std::allocator< IMP::algebra::Vector3D > >
12874 get_vertices(BoundingBox4D a) -> IMP::Vector< IMP::algebra::Vector4D,std::allocator< IMP::algebra::Vector4D > >
12875 get_vertices(BoundingBox5D a) -> IMP::Vector< IMP::algebra::Vector5D,std::allocator< IMP::algebra::Vector5D > >
12876 get_vertices(BoundingBox6D a) -> IMP::Vector< IMP::algebra::Vector6D,std::allocator< IMP::algebra::Vector6D > >
12877 get_vertices(BoundingBoxKD a) -> IMP::Vector< IMP::algebra::VectorKD,std::allocator< IMP::algebra::VectorKD > >
12878 get_vertices(UnitSimplex1D a) -> IMP::Vector< IMP::algebra::Vector1D,std::allocator< IMP::algebra::Vector1D > >
12879 get_vertices(UnitSimplex2D a) -> IMP::Vector< IMP::algebra::Vector2D,std::allocator< IMP::algebra::Vector2D > >
12880 get_vertices(UnitSimplex3D a) -> IMP::Vector< IMP::algebra::Vector3D,std::allocator< IMP::algebra::Vector3D > >
12881 get_vertices(UnitSimplex4D a) -> IMP::Vector< IMP::algebra::Vector4D,std::allocator< IMP::algebra::Vector4D > >
12882 get_vertices(UnitSimplex5D a) -> IMP::Vector< IMP::algebra::Vector5D,std::allocator< IMP::algebra::Vector5D > >
12883 get_vertices(UnitSimplex6D a) -> IMP::Vector< IMP::algebra::Vector6D,std::allocator< IMP::algebra::Vector6D > >
12884 get_vertices(UnitSimplexKD a) -> IMP::Vector< IMP::algebra::VectorKD,std::allocator< IMP::algebra::VectorKD > >
12886 return _IMP_algebra.get_vertices(*args)
12890 get_increasing_from_embedded(UnitSimplex1D a, Vector1D b) -> Vector1D
12891 get_increasing_from_embedded(UnitSimplex2D a, Vector2D b) -> Vector2D
12892 get_increasing_from_embedded(UnitSimplex3D a, Vector3D b) -> Vector3D
12893 get_increasing_from_embedded(UnitSimplex4D a, Vector4D b) -> Vector4D
12894 get_increasing_from_embedded(UnitSimplex5D a, Vector5D b) -> Vector5D
12895 get_increasing_from_embedded(UnitSimplex6D a, Vector6D b) -> Vector6D
12896 get_increasing_from_embedded(UnitSimplexKD a, VectorKD b) -> VectorKD
12898 return _IMP_algebra.get_increasing_from_embedded(*args)
12902 get_embedded_from_increasing(UnitSimplex1D a, Vector1D b) -> Vector1D
12903 get_embedded_from_increasing(UnitSimplex2D a, Vector2D b) -> Vector2D
12904 get_embedded_from_increasing(UnitSimplex3D a, Vector3D b) -> Vector3D
12905 get_embedded_from_increasing(UnitSimplex4D a, Vector4D b) -> Vector4D
12906 get_embedded_from_increasing(UnitSimplex5D a, Vector5D b) -> Vector5D
12907 get_embedded_from_increasing(UnitSimplex6D a, Vector6D b) -> Vector6D
12908 get_embedded_from_increasing(UnitSimplexKD a, VectorKD b) -> VectorKD
12910 return _IMP_algebra.get_embedded_from_increasing(*args)
12911 class _AxisAnglePair(object):
12912 r"""Proxy of C++ std::pair< IMP::algebra::VectorD< 3 >,double > class."""
12914 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
12915 __repr__ = _swig_repr
12917 def __init__(self, *args):
12919 __init__(_AxisAnglePair self) -> _AxisAnglePair
12920 __init__(_AxisAnglePair self, Vector3D first, double second) -> _AxisAnglePair
12921 __init__(_AxisAnglePair self, _AxisAnglePair other) -> _AxisAnglePair
12923 _IMP_algebra._AxisAnglePair_swiginit(self, _IMP_algebra.new__AxisAnglePair(*args))
12924 first = property(_IMP_algebra._AxisAnglePair_first_get, _IMP_algebra._AxisAnglePair_first_set, doc=
r"""first : IMP::algebra::VectorD<(3)>""")
12925 second = property(_IMP_algebra._AxisAnglePair_second_get, _IMP_algebra._AxisAnglePair_second_set, doc=
r"""second : double""")
12928 def __repr__(self):
12929 return str((self.first, self.second))
12930 def __getitem__(self, index):
12931 if not (index % 2):
12935 def __setitem__(self, index, val):
12936 if not (index % 2):
12940 __swig_destroy__ = _IMP_algebra.delete__AxisAnglePair
12943 _IMP_algebra._AxisAnglePair_swigregister(_AxisAnglePair)
12946 r"""get_transformation_aligning_first_to_second(IMP::Vector< IMP::algebra::VectorD< 3 >,std::allocator< IMP::algebra::VectorD< 3 > > > const & source, IMP::Vector< IMP::algebra::VectorD< 3 >,std::allocator< IMP::algebra::VectorD< 3 > > > const & target) -> Transformation3D"""
12947 return _IMP_algebra.get_transformation_aligning_first_to_second(source, target)
12948 class _RotatedVector3DAdjoint(object):
12949 r"""Proxy of C++ std::pair< IMP::algebra::VectorD< 3 >,IMP::algebra::VectorD< 4 > > class."""
12951 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
12952 __repr__ = _swig_repr
12954 def __init__(self, *args):
12956 __init__(_RotatedVector3DAdjoint self) -> _RotatedVector3DAdjoint
12957 __init__(_RotatedVector3DAdjoint self, Vector3D first, Vector4D second) -> _RotatedVector3DAdjoint
12958 __init__(_RotatedVector3DAdjoint self, _RotatedVector3DAdjoint other) -> _RotatedVector3DAdjoint
12960 _IMP_algebra._RotatedVector3DAdjoint_swiginit(self, _IMP_algebra.new__RotatedVector3DAdjoint(*args))
12961 first = property(_IMP_algebra._RotatedVector3DAdjoint_first_get, _IMP_algebra._RotatedVector3DAdjoint_first_set, doc=
r"""first : IMP::algebra::VectorD<(3)>""")
12962 second = property(_IMP_algebra._RotatedVector3DAdjoint_second_get, _IMP_algebra._RotatedVector3DAdjoint_second_set, doc=
r"""second : IMP::algebra::VectorD<(4)>""")
12965 def __repr__(self):
12966 return str((self.first, self.second))
12967 def __getitem__(self, index):
12968 if not (index % 2):
12972 def __setitem__(self, index, val):
12973 if not (index % 2):
12977 __swig_destroy__ = _IMP_algebra.delete__RotatedVector3DAdjoint
12980 _IMP_algebra._RotatedVector3DAdjoint_swigregister(_RotatedVector3DAdjoint)
12981 class _ComposeRotation3DAdjoint(object):
12982 r"""Proxy of C++ std::pair< IMP::algebra::VectorD< 4 >,IMP::algebra::VectorD< 4 > > class."""
12984 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
12985 __repr__ = _swig_repr
12987 def __init__(self, *args):
12989 __init__(_ComposeRotation3DAdjoint self) -> _ComposeRotation3DAdjoint
12990 __init__(_ComposeRotation3DAdjoint self, Vector4D first, Vector4D second) -> _ComposeRotation3DAdjoint
12991 __init__(_ComposeRotation3DAdjoint self, _ComposeRotation3DAdjoint other) -> _ComposeRotation3DAdjoint
12993 _IMP_algebra._ComposeRotation3DAdjoint_swiginit(self, _IMP_algebra.new__ComposeRotation3DAdjoint(*args))
12994 first = property(_IMP_algebra._ComposeRotation3DAdjoint_first_get, _IMP_algebra._ComposeRotation3DAdjoint_first_set, doc=
r"""first : IMP::algebra::VectorD<(4)>""")
12995 second = property(_IMP_algebra._ComposeRotation3DAdjoint_second_get, _IMP_algebra._ComposeRotation3DAdjoint_second_set, doc=
r"""second : IMP::algebra::VectorD<(4)>""")
12998 def __repr__(self):
12999 return str((self.first, self.second))
13000 def __getitem__(self, index):
13001 if not (index % 2):
13005 def __setitem__(self, index, val):
13006 if not (index % 2):
13010 __swig_destroy__ = _IMP_algebra.delete__ComposeRotation3DAdjoint
13013 _IMP_algebra._ComposeRotation3DAdjoint_swigregister(_ComposeRotation3DAdjoint)
13014 class _Transformation3DAdjoint(object):
13015 r"""Proxy of C++ std::pair< IMP::algebra::VectorD< 4 >,IMP::algebra::VectorD< 3 > > class."""
13017 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
13018 __repr__ = _swig_repr
13020 def __init__(self, *args):
13022 __init__(_Transformation3DAdjoint self) -> _Transformation3DAdjoint
13023 __init__(_Transformation3DAdjoint self, Vector4D first, Vector3D second) -> _Transformation3DAdjoint
13024 __init__(_Transformation3DAdjoint self, _Transformation3DAdjoint other) -> _Transformation3DAdjoint
13026 _IMP_algebra._Transformation3DAdjoint_swiginit(self, _IMP_algebra.new__Transformation3DAdjoint(*args))
13027 first = property(_IMP_algebra._Transformation3DAdjoint_first_get, _IMP_algebra._Transformation3DAdjoint_first_set, doc=
r"""first : IMP::algebra::VectorD<(4)>""")
13028 second = property(_IMP_algebra._Transformation3DAdjoint_second_get, _IMP_algebra._Transformation3DAdjoint_second_set, doc=
r"""second : IMP::algebra::VectorD<(3)>""")
13031 def __repr__(self):
13032 return str((self.first, self.second))
13033 def __getitem__(self, index):
13034 if not (index % 2):
13038 def __setitem__(self, index, val):
13039 if not (index % 2):
13043 __swig_destroy__ = _IMP_algebra.delete__Transformation3DAdjoint
13046 _IMP_algebra._Transformation3DAdjoint_swigregister(_Transformation3DAdjoint)
13047 class _TransformedVector3DAdjoint(object):
13048 r"""Proxy of C++ std::pair< IMP::algebra::VectorD< 3 >,std::pair< IMP::algebra::VectorD< 4 >,IMP::algebra::VectorD< 3 > > > class."""
13050 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
13051 __repr__ = _swig_repr
13053 def __init__(self, *args):
13055 __init__(_TransformedVector3DAdjoint self) -> _TransformedVector3DAdjoint
13056 __init__(_TransformedVector3DAdjoint self, Vector3D first, _Transformation3DAdjoint second) -> _TransformedVector3DAdjoint
13057 __init__(_TransformedVector3DAdjoint self, _TransformedVector3DAdjoint other) -> _TransformedVector3DAdjoint
13059 _IMP_algebra._TransformedVector3DAdjoint_swiginit(self, _IMP_algebra.new__TransformedVector3DAdjoint(*args))
13060 first = property(_IMP_algebra._TransformedVector3DAdjoint_first_get, _IMP_algebra._TransformedVector3DAdjoint_first_set, doc=
r"""first : IMP::algebra::VectorD<(3)>""")
13061 second = property(_IMP_algebra._TransformedVector3DAdjoint_second_get, _IMP_algebra._TransformedVector3DAdjoint_second_set, doc=
r"""second : std::pair<(IMP::algebra::VectorD<(4)>,IMP::algebra::VectorD<(3)>)>""")
13064 def __repr__(self):
13065 return str((self.first, self.second))
13066 def __getitem__(self, index):
13067 if not (index % 2):
13071 def __setitem__(self, index, val):
13072 if not (index % 2):
13076 __swig_destroy__ = _IMP_algebra.delete__TransformedVector3DAdjoint
13079 _IMP_algebra._TransformedVector3DAdjoint_swigregister(_TransformedVector3DAdjoint)
13080 class _ComposeTransformation3DAdjoint(object):
13081 r"""Proxy of C++ std::pair< std::pair< IMP::algebra::VectorD< 4 >,IMP::algebra::VectorD< 3 > >,std::pair< IMP::algebra::VectorD< 4 >,IMP::algebra::VectorD< 3 > > > class."""
13083 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
13084 __repr__ = _swig_repr
13086 def __init__(self, *args):
13088 __init__(_ComposeTransformation3DAdjoint self) -> _ComposeTransformation3DAdjoint
13089 __init__(_ComposeTransformation3DAdjoint self, _Transformation3DAdjoint first, _Transformation3DAdjoint second) -> _ComposeTransformation3DAdjoint
13090 __init__(_ComposeTransformation3DAdjoint self, _ComposeTransformation3DAdjoint other) -> _ComposeTransformation3DAdjoint
13092 _IMP_algebra._ComposeTransformation3DAdjoint_swiginit(self, _IMP_algebra.new__ComposeTransformation3DAdjoint(*args))
13093 first = property(_IMP_algebra._ComposeTransformation3DAdjoint_first_get, _IMP_algebra._ComposeTransformation3DAdjoint_first_set, doc=
r"""first : std::pair<(IMP::algebra::VectorD<(4)>,IMP::algebra::VectorD<(3)>)>""")
13094 second = property(_IMP_algebra._ComposeTransformation3DAdjoint_second_get, _IMP_algebra._ComposeTransformation3DAdjoint_second_set, doc=
r"""second : std::pair<(IMP::algebra::VectorD<(4)>,IMP::algebra::VectorD<(3)>)>""")
13097 def __repr__(self):
13098 return str((self.first, self.second))
13099 def __getitem__(self, index):
13100 if not (index % 2):
13104 def __setitem__(self, index, val):
13105 if not (index % 2):
13109 __swig_destroy__ = _IMP_algebra.delete__ComposeTransformation3DAdjoint
13112 _IMP_algebra._ComposeTransformation3DAdjoint_swigregister(_ComposeTransformation3DAdjoint)
13115 r"""get_rmsd_transforming_first(Transformation3D tr, IMP::algebra::Vector3Ds const & v0, IMP::algebra::Vector3Ds const & v1) -> double"""
13116 return _IMP_algebra.get_rmsd_transforming_first(tr, v0, v1)
13119 r"""get_rmsd(IMP::algebra::Vector3Ds const & v0, IMP::algebra::Vector3Ds const & v1) -> double"""
13120 return _IMP_algebra.get_rmsd(v0, v1)
13122 def get_weighted_rmsd_transforming_first(tr, v0, v1, weights):
13123 r"""get_weighted_rmsd_transforming_first(Transformation3D tr, IMP::algebra::Vector3Ds const & v0, IMP::algebra::Vector3Ds const & v1, IMP::Floats const & weights) -> double"""
13124 return _IMP_algebra.get_weighted_rmsd_transforming_first(tr, v0, v1, weights)
13127 r"""get_weighted_rmsd(IMP::algebra::Vector3Ds const & v0, IMP::algebra::Vector3Ds const & v1, IMP::Floats const & weights) -> double"""
13128 return _IMP_algebra.get_weighted_rmsd(v0, v1, weights)
13130 LinearFit=LinearFit2D
13131 ParabolicFit=ParabolicFit2D
13134 def get_module_name():
13135 r"""get_module_name() -> std::string const"""
13136 return _IMP_algebra.get_module_name()
13139 r"""get_module_version() -> std::string const"""
13140 return _IMP_algebra.get_module_version()
13143 r"""get_example_path(std::string fname) -> std::string"""
13144 return _IMP_algebra.get_example_path(fname)
13147 r"""get_data_path(std::string fname) -> std::string"""
13148 return _IMP_algebra.get_data_path(fname)
13150 from .
import _version_check
bool get_is_big_endian()
Returns 1 if machine is big endian else 0.
BoundingBoxD<-1 > BoundingBoxKD
Typedef for Python.
Rotation3D get_rotation_about_normalized_axis(const Vector3D &axis_norm, double angle)
double get_height(const Surface &s, const XYZR &d)
Get height of sphere above surface.
Transformation2D get_transformation_aligning_pair(const Vector2Ds &set_from, const Vector2Ds &set_to)
Grid3D< float, DenseGridStorage3D< float > > DenseFloatGrid3D
SphereD< 4 > Sphere4D
Typedef for Python.
SphereD< 3 > Sphere3D
Typedef for Python.
VectorD< D > get_random_vector_on(const BoundingBoxD< D > &bb)
Generate a random vector on a box with uniform density.
void write_pts(const Vector3Ds &vs, TextOutput out)
Write a set of 3D vectors to a file.
Grid3D< int, SparseGridStorage3D< int, UnboundedGridStorage3D > > SparseUnboundedIntGrid3D
Rotation3D get_rotation_from_x_y_axes(const Vector3D &x, const Vector3D &y)
BoundingBoxD< 3 > BoundingBox3D
Typedef for Python.
Rotation3D get_rotation_from_fixed_xyz(double xr, double yr, double zr)
Initialize a rotation in x-y-z order from three angles.
void compose_adjoint(const Rotation3D &A, const Rotation3D &B, Vector4D DC, Rotation3DAdjoint *DA, Rotation3DAdjoint *DB)
Get adjoint of inputs to compose from adjoint of output.
VectorD< 3 > get_random_vector_on_unit_sphere()
DenseGrid3D< double > get_rasterized(const Gaussian3Ds &gmm, const Floats &weights, double cell_width, const BoundingBox3D &bb)
Rasterize the Gaussians to a grid.
Vector3Ds get_random_chain(unsigned int n, double r, const Vector3D &start=Vector3D(0, 0, 0), const Sphere3Ds &obstacles=Sphere3Ds())
Generate a random chain with no collisions.
VectorD< D > get_zero_vector_kd(int Di)
Return a dynamically sized vector of zeros.
Rotation2D compose(const Rotation2D &a, const Rotation2D &b)
Compose two rotations a and b.
Sphere3D get_enclosing_sphere(const Sphere3Ds &ss)
Return a sphere containing the listed spheres.
Vector< VectorD< D > > get_uniform_surface_cover(const SphereD< D > &s, unsigned int n)
Generate a set of vectors which covers a sphere uniformly.
algebra::Rotation3Ds get_uniformly_sampled_rotations(double delta)
Generates a nondegenerate set of Euler angles with a delta resolution.
Vector< VectorD< D > > get_vertices(const BoundingBoxD< D > &bb)
Return a list of the 2^D bounding points for the bounding box.
bool get_is_little_endian()
Returns 1 if machine is little endian else 0.
Triangle3D get_largest_triangle(const Vector3Ds &points)
Return the largest triangle defined by 3 points from the input.
An exception for an invalid usage of IMP.
Make CGAL functionality available to IMP.
Gaussian3D get_gaussian_from_covariance(const Eigen::Matrix3d &covariance, const Vector3D ¢er)
Return a Gaussian centered at the origin from a covariance matrix.
IntPairs get_edges(const BoundingBoxD< 3 > &)
Return the edges of the box as indices into the vertices list.
double get_area(const Geometry &)
Compute the area of any surface object.
BoundingBoxD< 5 > BoundingBox5D
Typedef for Python.
SphereD< 2 > Sphere2D
Typedef for Python.
BoundingBoxD< D > get_union(BoundingBoxD< D > a, const BoundingBoxD< D > &b)
Return the union bounding box.
double get_squared_distance(const VectorD< D > &v1, const VectorD< D > &v2)
Compute the squared distance between two vectors.
VT get_unit_vector(VT vt)
Returns a unit vector pointing at the same direction as this vector.
Transformation3D get_transformation_from_first_triangle_to_second(Triangle3D first_tri, Triangle3D second_tri)
Return a transformation between two triangles.
double get_ball_radius_from_volume_3d(double volume)
Return the radius of a sphere with a given volume.
double get_weighted_rmsd(const Vector3DsOrXYZs0 &m1, const Vector3DsOrXYZs1 &m2, const Floats &weights)
Vector3D get_reflected(const Plane3D &pln, const Vector3D &p)
Return the point reflected about the plane.
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
Grid3D< double, DenseGridStorage3D< double > > DenseDoubleGrid3D
Atom get_atom(Residue rd, AtomType at)
Return a particle atom from the residue.
Eigen::MatrixXd get_jacobian_of_composed_wrt_first(const Rotation3D &q, const Rotation3D &p, bool wrt_unnorm=false)
Get gradient of quaternion product with respect to first quaternion.
VectorD< D > get_basis_vector_kd(int Di, unsigned int coordinate)
Return the basis vector for the given coordinate.
double get_angle(const Line3D &a, const Line3D &b)
Get angle in radians between two lines around their closest points.
VectorD< D > get_ones_vector_kd(unsigned int Di, double v=1)
Return a vector of ones (or another constant)
BoundingBoxD< 2 > BoundingBox2D
Typedef for Python.
Rotation3D get_rotation_about_axis(const Vector3D &axis, double angle)
Generate a Rotation3D object from a rotation around an axis.
Segment3D get_shortest_segment(const Segment3D &s, const Vector3D &p)
Vector3Ds read_pts(TextInput input)
Read a set of 3D vectors from a file.
BoundingBoxD< D > get_intersection(const BoundingBoxD< D > &a, const BoundingBoxD< D > &b)
Return the intersecting bounding box.
IMP::algebra::Transformation3D get_transformation_aligning_first_to_second(const Vector3DsOrXYZs0 &source, const Vector3DsOrXYZs1 &target)
Compute the rigid transform bringing the first point set to the second.
Transformation2D get_rotation_about_point(const Vector2D &point, const Rotation2D &rotation)
Generate a Transformation2D object from a rotation around a point.
double get_volume(const BoundingBoxD< D > &bb)
See BoundingBoxD.
Rotation3D get_random_rotation_3d()
Pick a rotation at random from all possible rotations.
Vector3D get_vector_product(const Vector3D &p1, const Vector3D &p2)
Return the vector product (cross product) of two vectors.
bool get_interiors_intersect(const BoundingBoxD< D > &a, const BoundingBoxD< D > &b)
Return true if they intersect.
VectorD< D > get_increasing_from_embedded(const UnitSimplexD< D > &s, const VectorD< D > &p)
Convert point on simplex from embedded to increasing coordinates.
Ints get_index(const ParticlesTemp &particles, const Subset &subset, const Subsets &excluded)
Common base class for heavy weight IMP objects.
VectorD< D > get_embedded_from_increasing(const UnitSimplexD< D > &s, const VectorD< D > &p)
Convert point on simplex from increasing to embedded coordinates.
FixedXYZ get_fixed_xyz_from_rotation(const Rotation3D &r)
The inverse of rotation_from_fixed_xyz()
bool get_are_colinear(const Vector3D &p1, const Vector3D &p2, const Vector3D &p3)
Return true if the three points are co-linear.
BoundingBoxD< 4 > BoundingBox4D
Typedef for Python.
Rotation2D get_identity_rotation_2d()
Build an identity rotation in 2D.
Sphere3Ds read_spheres(TextInput input)
Read a set of 3D spheres from a file.
Vector3D get_projected(const Line3D &l, const Vector3D &p)
Project a point onto the line.
Rotation3D get_rotation_from_fixed_zyz(double Rot, double Tilt, double Psi)
Generate a rotation object from Euler Angles.
SphereD< 6 > Sphere6D
Typedef for Python.
double get_rmsd(const Vector3DsOrXYZs0 &m1, const Vector3DsOrXYZs1 &m2)
VectorD< D > get_random_vector_in(const BoundingBoxD< D > &bb)
Generate a random vector in a box with uniform density.
SphereD< 5 > Sphere5D
Typedef for Python.
BoundingBoxD<-1 > get_unit_bounding_box_kd(unsigned int d)
Box with radius one.
double get_radius_of_gyration(const Vector3Ds &ps)
Return the radius of gyration of a set of points.
std::pair< Vector3D, double > get_axis_and_angle(const Rotation3D &rot)
Decompose a Rotation3D object into a rotation around an axis.
FloatPair get_surface_area_and_volume(const algebra::Sphere3Ds &ss)
Get surface area & volume of the union of the balls bounded by the spheres.
Transformation3Ds get_alignments_from_first_to_second(const PrincipalComponentAnalysisD< 3 > &pca1, const PrincipalComponentAnalysisD< 3 > &pca2)
Get all alignments of the first principal component system to the second one.
SphereD< 1 > Sphere1D
Typedef for Python.
Rotation3D get_interpolated(const Rotation3D &a, const Rotation3D &b, double f)
Interpolate between two rotations.
Rotation3D get_rotation_from_vector4d(const VectorD< 4 > &v)
Compute a rotation from an unnormalized quaternion.
BoundingBoxD<-1 > get_cube_kd(unsigned int d, double radius)
Cube with radius of length side.
Rotation3D get_rotation_taking_first_to_second(const Vector3D &v1, const Vector3D &v2)
Create a rotation from the first vector to the second one.
Rotation3Ds get_uniform_cover_rotations_3d(unsigned int num_points)
Cover the space of rotations evenly.
PrincipalComponentAnalysisD< D > get_principal_components(const Vector< VectorD< D > > &ps)
Perform principal components analysis on a set of vectors.
Rotation2D get_rotation_to_x_axis(const Vector2D &v)
Vector3D get_centroid(const Vector3Ds &ps)
Return the centroid of a set of vectors.
std::ostream & show(Hierarchy h, std::ostream &out=std::cout)
Print the hierarchy using a given decorator to display each node.
Transformation3D get_identity_transformation_3d()
Return a transformation that does not do anything.
Eigen::MatrixXd get_jacobian_of_composed_wrt_second(const Rotation3D &q, const Rotation3D &p, bool wrt_unnorm=false)
Get Jacobian of quaternion product with respect to second quaternion.
void reversed_read(void *dest, size_t size, size_t nitems, std::ifstream &f, bool reverse)
Reads from file in normal or reverse order.
Rotation3D get_rotation_from_matrix(double m00, double m01, double m02, double m10, double m11, double m12, double m20, double m21, double m22)
Generate a Rotation3D object from a rotation matrix.
Transformation3D get_transformation_3d(const Transformation2D &t2d)
Build a 3D transformation from a 2D one.
double get_relative_projection_on_segment(const Segment3D &s, const algebra::Vector3D &p)
Return the 'relative' projection of a point p onto the line that contains s.
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
Eigen::Matrix3d get_covariance(const Gaussian3D &g)
Rotation3D get_identity_rotation_3d()
Return a rotation that does not do anything.
void write_spheres(const Sphere3Ds &vs, TextOutput out)
Write a set of 3D spheres to a file.
Sphere3Ds get_simplified_from_volume(Sphere3Ds in, double maximum_allowed_error_angstroms)
Get a set of balls that approximates the surface of the passed set.
void reversed_write(const void *src, size_t size, size_t nitems, std::ofstream &f, bool reverse=false)
Writes to a file in normal or reversed order.
algebra::Segment3D get_segment_connecting_first_to_second(const Line3D &a, const Line3D &b)
Get shortest possible segment from the first line to the second.
Vector< VectorD< D > > get_grid_interior_cover_by_spacing(const BoundingBoxD< D > &bb, double s)
DenseGrid3D< double > get_rasterized_fast(const Gaussian3Ds &gmm, const Floats &weights, double cell_width, const BoundingBox3D &bb, double factor=2.5)
Rasterize the Gaussians to a grid.
Vector3D get_orthogonal_vector(const Vector3D &v)
Return a vector that is perpendicular to the given vector.
double get_surface_area(const Geometry &)
Compute the surface area of any volumetric object.
double get_rmsd_transforming_first(const Transformation3D &tr, const Vector3DsOrXYZs0 &m1, const Vector3DsOrXYZs1 &m2)
Calculate the root mean square deviation between two sets of 3D points.
BoundingBoxD< 6 > BoundingBox6D
Typedef for Python.
SphereD<-1 > SphereKD
Typedef for Python.
ParticleIndexes get_indexes(const ParticlesTemp &ps)
Get the indexes from a list of particles.
DensityMap * get_segment(DensityMap *map_to_segment, int nx_start, int nx_end, int ny_start, int ny_end, int nz_start, int nz_end)
Get a segment of the map according to xyz indexes.
Vector3Ds get_grid_surface_cover(const Cylinder3D &cyl, int number_of_cycles, int number_of_points_on_cycle)
Generate a grid of 3d points on a cylinder surface.
Rotation3D get_rotation_from_fixed_zxz(double phi, double theta, double psi)
Initialize a rotation from Euler angles.
BoundingBoxD< 1 > BoundingBox1D
Typedef for Python.
double get_distance(const Line3D &s, const Vector3D &p)
Get closest distance between a line and a point.
Transformation3D get_random_local_transformation(Vector3D origin, double max_translation=5., double max_angle_in_rad=0.26)
Get a local transformation.
Transformation2D get_identity_transformation_2d()
Return a transformation that does not do anything.
std::string get_module_version()
Return the version of this module, as a string.
ConnollySurfacePoints get_connolly_surface(const algebra::Sphere3Ds &spheres, double density, double probe_radius)
Rotation2D get_random_rotation_2d()
Build an identity rotation in 2D.