17 import builtins
as __builtin__
21 strthis =
"proxy of " + self.this.__repr__()
22 except __builtin__.Exception:
24 return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
27 def _swig_setattr_nondynamic_instance_variable(set):
28 def set_instance_attr(self, name, value):
30 set(self, name, value)
31 elif name ==
"thisown":
33 elif hasattr(self, name)
and isinstance(getattr(type(self), name), property):
34 set(self, name, value)
36 raise AttributeError(
"You cannot add instance attributes to %s" % self)
37 return set_instance_attr
40 def _swig_setattr_nondynamic_class_variable(set):
41 def set_class_attr(cls, name, value):
42 if hasattr(cls, name)
and not isinstance(getattr(cls, name), property):
45 raise AttributeError(
"You cannot add class attributes to %s" % cls)
49 class _SwigNonDynamicMeta(type):
50 """Meta class to enforce nondynamic attributes (no new attributes) for a class"""
51 __setattr__ = _swig_setattr_nondynamic_class_variable(type.__setattr__)
56 class IMP_ALGEBRA_SwigPyIterator(object):
57 r"""Proxy of C++ swig::IMP_ALGEBRA_SwigPyIterator class."""
59 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
61 def __init__(self, *args, **kwargs):
62 raise AttributeError(
"No constructor defined - class is abstract")
64 __swig_destroy__ = _IMP_algebra.delete_IMP_ALGEBRA_SwigPyIterator
67 r"""value(IMP_ALGEBRA_SwigPyIterator self) -> PyObject *"""
68 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_value(self)
71 r"""incr(IMP_ALGEBRA_SwigPyIterator self, size_t n=1) -> IMP_ALGEBRA_SwigPyIterator"""
72 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_incr(self, n)
75 r"""decr(IMP_ALGEBRA_SwigPyIterator self, size_t n=1) -> IMP_ALGEBRA_SwigPyIterator"""
76 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_decr(self, n)
78 def distance(self, x):
79 r"""distance(IMP_ALGEBRA_SwigPyIterator self, IMP_ALGEBRA_SwigPyIterator x) -> ptrdiff_t"""
80 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_distance(self, x)
83 r"""equal(IMP_ALGEBRA_SwigPyIterator self, IMP_ALGEBRA_SwigPyIterator x) -> bool"""
84 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_equal(self, x)
87 r"""copy(IMP_ALGEBRA_SwigPyIterator self) -> IMP_ALGEBRA_SwigPyIterator"""
88 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_copy(self)
91 r"""__next__(IMP_ALGEBRA_SwigPyIterator self) -> PyObject *"""
92 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___next__(self)
95 r"""previous(IMP_ALGEBRA_SwigPyIterator self) -> PyObject *"""
96 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_previous(self)
99 r"""advance(IMP_ALGEBRA_SwigPyIterator self, ptrdiff_t n) -> IMP_ALGEBRA_SwigPyIterator"""
100 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_advance(self, n)
103 r"""__eq__(IMP_ALGEBRA_SwigPyIterator self, IMP_ALGEBRA_SwigPyIterator x) -> bool"""
104 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___eq__(self, x)
107 r"""__ne__(IMP_ALGEBRA_SwigPyIterator self, IMP_ALGEBRA_SwigPyIterator x) -> bool"""
108 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___ne__(self, x)
110 def __iadd__(self, n):
111 r"""__iadd__(IMP_ALGEBRA_SwigPyIterator self, ptrdiff_t n) -> IMP_ALGEBRA_SwigPyIterator"""
112 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___iadd__(self, n)
114 def __isub__(self, n):
115 r"""__isub__(IMP_ALGEBRA_SwigPyIterator self, ptrdiff_t n) -> IMP_ALGEBRA_SwigPyIterator"""
116 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___isub__(self, n)
118 def __add__(self, n):
119 r"""__add__(IMP_ALGEBRA_SwigPyIterator self, ptrdiff_t n) -> IMP_ALGEBRA_SwigPyIterator"""
120 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___add__(self, n)
122 def __sub__(self, *args):
124 __sub__(IMP_ALGEBRA_SwigPyIterator self, ptrdiff_t n) -> IMP_ALGEBRA_SwigPyIterator
125 __sub__(IMP_ALGEBRA_SwigPyIterator self, IMP_ALGEBRA_SwigPyIterator x) -> ptrdiff_t
127 return _IMP_algebra.IMP_ALGEBRA_SwigPyIterator___sub__(self, *args)
132 _IMP_algebra.IMP_ALGEBRA_SwigPyIterator_swigregister(IMP_ALGEBRA_SwigPyIterator)
139 IMP_DEBUG = _IMP_algebra.IMP_DEBUG
141 IMP_RELEASE = _IMP_algebra.IMP_RELEASE
143 IMP_SILENT = _IMP_algebra.IMP_SILENT
145 IMP_PROGRESS = _IMP_algebra.IMP_PROGRESS
147 IMP_TERSE = _IMP_algebra.IMP_TERSE
149 IMP_VERBOSE = _IMP_algebra.IMP_VERBOSE
151 IMP_MEMORY = _IMP_algebra.IMP_MEMORY
153 IMP_NONE = _IMP_algebra.IMP_NONE
155 IMP_USAGE = _IMP_algebra.IMP_USAGE
157 IMP_INTERNAL = _IMP_algebra.IMP_INTERNAL
159 IMP_KERNEL_HAS_LOG4CXX = _IMP_algebra.IMP_KERNEL_HAS_LOG4CXX
161 IMP_COMPILER_HAS_CEREAL_RAW_POINTER = _IMP_algebra.IMP_COMPILER_HAS_CEREAL_RAW_POINTER
163 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_algebra.IMP_COMPILER_HAS_DEBUG_VECTOR
165 IMP_COMPILER_HAS_RANDOM_SHUFFLE = _IMP_algebra.IMP_COMPILER_HAS_RANDOM_SHUFFLE
167 IMP_COMPILER_HAS_THREE_WAY = _IMP_algebra.IMP_COMPILER_HAS_THREE_WAY
169 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_algebra.IMP_KERNEL_HAS_BOOST_RANDOM
171 IMP_KERNEL_HAS_NUMPY = _IMP_algebra.IMP_KERNEL_HAS_NUMPY
173 IMP_KERNEL_HAS_BOOST_SYSTEM = _IMP_algebra.IMP_KERNEL_HAS_BOOST_SYSTEM
175 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_algebra.IMP_KERNEL_HAS_GPERFTOOLS
177 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_algebra.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
179 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_algebra.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
181 IMPKERNEL_SHOW_WARNINGS = _IMP_algebra.IMPKERNEL_SHOW_WARNINGS
185 class _DirectorObjects:
186 """@internal Simple class to keep references to director objects
187 to prevent premature deletion."""
190 def register(self, obj):
191 """Take a reference to a director object; will only work for
192 refcounted C++ classes"""
193 if hasattr(obj,
'get_ref_count'):
194 self._objects.append(obj)
196 """Only drop our reference and allow cleanup by Python if no other
197 Python references exist (we hold 3 references: one in self._objects,
198 one in x, and one in the argument list for getrefcount) *and* no
199 other C++ references exist (the Python object always holds one)"""
200 objs = [x
for x
in self._objects
if sys.getrefcount(x) > 3 \
201 or x.get_ref_count() > 1]
205 def get_object_count(self):
206 """Get number of director objects (useful for testing only)"""
207 return len(self._objects)
208 _director_objects = _DirectorObjects()
210 class _ostream(object):
211 r"""Proxy of C++ std::ostream class."""
213 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
215 def __init__(self, *args, **kwargs):
216 raise AttributeError(
"No constructor defined")
217 __repr__ = _swig_repr
219 def write(self, osa_buf):
220 r"""write(_ostream self, char const * osa_buf)"""
221 return _IMP_algebra._ostream_write(self, osa_buf)
224 _IMP_algebra._ostream_swigregister(_ostream)
225 IMP_C_OPEN_BINARY = _IMP_algebra.IMP_C_OPEN_BINARY
228 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_algebra.IMP_CGAL_HAS_BOOST_FILESYSTEM
230 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_algebra.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
232 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_algebra.IMP_CGAL_HAS_BOOST_RANDOM
234 IMP_CGAL_HAS_NUMPY = _IMP_algebra.IMP_CGAL_HAS_NUMPY
236 IMPCGAL_SHOW_WARNINGS = _IMP_algebra.IMPCGAL_SHOW_WARNINGS
239 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_algebra.IMP_ALGEBRA_HAS_IMP_CGAL
241 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_algebra.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
243 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_algebra.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
245 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_algebra.IMP_ALGEBRA_HAS_BOOST_RANDOM
247 IMP_ALGEBRA_HAS_CGAL = _IMP_algebra.IMP_ALGEBRA_HAS_CGAL
249 IMP_ALGEBRA_HAS_NUMPY = _IMP_algebra.IMP_ALGEBRA_HAS_NUMPY
251 IMP_ALGEBRA_HAS_ANN = _IMP_algebra.IMP_ALGEBRA_HAS_ANN
253 IMPALGEBRA_SHOW_WARNINGS = _IMP_algebra.IMPALGEBRA_SHOW_WARNINGS
258 return v.get_coordinates()
263 return v.get_sphere()
268 _object_types.append(
"VectorKDMetric")
271 def _object_cast_to_VectorKDMetric(o):
272 r"""_object_cast_to_VectorKDMetric(Object o) -> VectorKDMetric"""
273 return _IMP_algebra._object_cast_to_VectorKDMetric(o)
275 _object_types.append(
"EuclideanVectorKDMetric")
278 def _object_cast_to_EuclideanVectorKDMetric(o):
279 r"""_object_cast_to_EuclideanVectorKDMetric(Object o) -> EuclideanVectorKDMetric"""
280 return _IMP_algebra._object_cast_to_EuclideanVectorKDMetric(o)
282 _object_types.append(
"MaxVectorKDMetric")
285 def _object_cast_to_MaxVectorKDMetric(o):
286 r"""_object_cast_to_MaxVectorKDMetric(Object o) -> MaxVectorKDMetric"""
287 return _IMP_algebra._object_cast_to_MaxVectorKDMetric(o)
289 _object_types.append(
"DynamicNearestNeighbor3D")
292 def _object_cast_to_DynamicNearestNeighbor3D(o):
293 r"""_object_cast_to_DynamicNearestNeighbor3D(Object o) -> DynamicNearestNeighbor3D"""
294 return _IMP_algebra._object_cast_to_DynamicNearestNeighbor3D(o)
297 _plural_types.append(
"Rotation2Ds")
298 _value_types.append(
"Rotation2D")
302 _plural_types.append(
"Rotation3Ds")
303 _value_types.append(
"Rotation3D")
307 _plural_types.append(
"Reflection3Ds")
308 _value_types.append(
"Reflection3D")
311 Transformation2Ds=list
312 _plural_types.append(
"Transformation2Ds")
313 _value_types.append(
"Transformation2D")
316 Transformation3Ds=list
317 _plural_types.append(
"Transformation3Ds")
318 _value_types.append(
"Transformation3D")
321 SphericalVector3Ds=list
322 _plural_types.append(
"SphericalVector3Ds")
323 _value_types.append(
"SphericalVector3D")
327 _plural_types.append(
"Triangle3Ds")
328 _value_types.append(
"Triangle3D")
332 _plural_types.append(
"Cone3Ds")
333 _value_types.append(
"Cone3D")
337 _plural_types.append(
"Cylinder3Ds")
338 _value_types.append(
"Cylinder3D")
342 _plural_types.append(
"Ellipsoid3Ds")
343 _value_types.append(
"Ellipsoid3D")
347 _plural_types.append(
"Line3Ds")
348 _value_types.append(
"Line3D")
352 _plural_types.append(
"Plane3Ds")
353 _value_types.append(
"Plane3D")
357 _plural_types.append(
"Segment3Ds")
358 _value_types.append(
"Segment3D")
362 _plural_types.append(
"SpherePatch3Ds")
363 _value_types.append(
"SpherePatch3D")
366 ConnollySurfacePoints=list
367 _plural_types.append(
"ConnollySurfacePoints")
368 _value_types.append(
"ConnollySurfacePoint")
372 _plural_types.append(
"Sphere1Ds")
373 _value_types.append(
"Sphere1D")
377 _plural_types.append(
"Sphere2Ds")
378 _value_types.append(
"Sphere2D")
382 _plural_types.append(
"Sphere3Ds")
383 _value_types.append(
"Sphere3D")
387 _plural_types.append(
"Sphere4Ds")
388 _value_types.append(
"Sphere4D")
392 _plural_types.append(
"Sphere5Ds")
393 _value_types.append(
"Sphere5D")
397 _plural_types.append(
"Sphere6Ds")
398 _value_types.append(
"Sphere6D")
402 _plural_types.append(
"Sphere1Ds")
403 _value_types.append(
"SphereD<1>")
407 _plural_types.append(
"Sphere2Ds")
408 _value_types.append(
"SphereD<2>")
412 _plural_types.append(
"Sphere3Ds")
413 _value_types.append(
"SphereD<3>")
417 _plural_types.append(
"Sphere4Ds")
418 _value_types.append(
"SphereD<4>")
422 _plural_types.append(
"Sphere5Ds")
423 _value_types.append(
"SphereD<5>")
427 _plural_types.append(
"Sphere6Ds")
428 _value_types.append(
"SphereD<6>")
432 _plural_types.append(
"SphereKDs")
433 _value_types.append(
"SphereKD")
437 _plural_types.append(
"SphereKDs")
438 _value_types.append(
"SphereD<-1>")
442 _plural_types.append(
"UnitSimplex1Ds")
443 _value_types.append(
"UnitSimplex1D")
447 _plural_types.append(
"UnitSimplex2Ds")
448 _value_types.append(
"UnitSimplex2D")
452 _plural_types.append(
"UnitSimplex3Ds")
453 _value_types.append(
"UnitSimplex3D")
457 _plural_types.append(
"UnitSimplex4Ds")
458 _value_types.append(
"UnitSimplex4D")
462 _plural_types.append(
"UnitSimplex5Ds")
463 _value_types.append(
"UnitSimplex5D")
467 _plural_types.append(
"UnitSimplex6Ds")
468 _value_types.append(
"UnitSimplex6D")
472 _plural_types.append(
"UnitSimplex1Ds")
473 _value_types.append(
"UnitSimplexD<1>")
477 _plural_types.append(
"UnitSimplex2Ds")
478 _value_types.append(
"UnitSimplexD<2>")
482 _plural_types.append(
"UnitSimplex3Ds")
483 _value_types.append(
"UnitSimplexD<3>")
487 _plural_types.append(
"UnitSimplex4Ds")
488 _value_types.append(
"UnitSimplexD<4>")
492 _plural_types.append(
"UnitSimplex5Ds")
493 _value_types.append(
"UnitSimplexD<5>")
497 _plural_types.append(
"UnitSimplex6Ds")
498 _value_types.append(
"UnitSimplexD<6>")
502 _plural_types.append(
"UnitSimplexKDs")
503 _value_types.append(
"UnitSimplexKD")
507 _plural_types.append(
"UnitSimplexKDs")
508 _value_types.append(
"UnitSimplexD<-1>")
512 _plural_types.append(
"BoundingBox1Ds")
513 _value_types.append(
"BoundingBox1D")
517 _plural_types.append(
"BoundingBox2Ds")
518 _value_types.append(
"BoundingBox2D")
522 _plural_types.append(
"BoundingBox3Ds")
523 _value_types.append(
"BoundingBox3D")
527 _plural_types.append(
"BoundingBox4Ds")
528 _value_types.append(
"BoundingBox4D")
532 _plural_types.append(
"BoundingBox5Ds")
533 _value_types.append(
"BoundingBox5D")
537 _plural_types.append(
"BoundingBox6Ds")
538 _value_types.append(
"BoundingBox6D")
542 _plural_types.append(
"BoundingBox1Ds")
543 _value_types.append(
"BoundingBoxD<1>")
547 _plural_types.append(
"BoundingBox2Ds")
548 _value_types.append(
"BoundingBoxD<2>")
552 _plural_types.append(
"BoundingBox3Ds")
553 _value_types.append(
"BoundingBoxD<3>")
557 _plural_types.append(
"BoundingBox4Ds")
558 _value_types.append(
"BoundingBoxD<4>")
562 _plural_types.append(
"BoundingBox5Ds")
563 _value_types.append(
"BoundingBoxD<5>")
567 _plural_types.append(
"BoundingBox6Ds")
568 _value_types.append(
"BoundingBoxD<6>")
572 _plural_types.append(
"BoundingBoxKDs")
573 _value_types.append(
"BoundingBoxKD")
577 _plural_types.append(
"BoundingBoxKDs")
578 _value_types.append(
"BoundingBoxD<-1>")
581 PrincipalComponentAnalysis1Ds=list
582 _plural_types.append(
"PrincipalComponentAnalysis1Ds")
583 _value_types.append(
"PrincipalComponentAnalysis1D")
586 PrincipalComponentAnalysis2Ds=list
587 _plural_types.append(
"PrincipalComponentAnalysis2Ds")
588 _value_types.append(
"PrincipalComponentAnalysis2D")
591 PrincipalComponentAnalysis3Ds=list
592 _plural_types.append(
"PrincipalComponentAnalysis3Ds")
593 _value_types.append(
"PrincipalComponentAnalysis3D")
596 PrincipalComponentAnalysis4Ds=list
597 _plural_types.append(
"PrincipalComponentAnalysis4Ds")
598 _value_types.append(
"PrincipalComponentAnalysis4D")
601 PrincipalComponentAnalysis5Ds=list
602 _plural_types.append(
"PrincipalComponentAnalysis5Ds")
603 _value_types.append(
"PrincipalComponentAnalysis5D")
606 PrincipalComponentAnalysis6Ds=list
607 _plural_types.append(
"PrincipalComponentAnalysis6Ds")
608 _value_types.append(
"PrincipalComponentAnalysis6D")
611 PrincipalComponentAnalysis1Ds=list
612 _plural_types.append(
"PrincipalComponentAnalysis1Ds")
613 _value_types.append(
"PrincipalComponentAnalysisD<1>")
616 PrincipalComponentAnalysis2Ds=list
617 _plural_types.append(
"PrincipalComponentAnalysis2Ds")
618 _value_types.append(
"PrincipalComponentAnalysisD<2>")
621 PrincipalComponentAnalysis3Ds=list
622 _plural_types.append(
"PrincipalComponentAnalysis3Ds")
623 _value_types.append(
"PrincipalComponentAnalysisD<3>")
626 PrincipalComponentAnalysis4Ds=list
627 _plural_types.append(
"PrincipalComponentAnalysis4Ds")
628 _value_types.append(
"PrincipalComponentAnalysisD<4>")
631 PrincipalComponentAnalysis5Ds=list
632 _plural_types.append(
"PrincipalComponentAnalysis5Ds")
633 _value_types.append(
"PrincipalComponentAnalysisD<5>")
636 PrincipalComponentAnalysis6Ds=list
637 _plural_types.append(
"PrincipalComponentAnalysis6Ds")
638 _value_types.append(
"PrincipalComponentAnalysisD<6>")
641 PrincipalComponentAnalysisKDs=list
642 _plural_types.append(
"PrincipalComponentAnalysisKDs")
643 _value_types.append(
"PrincipalComponentAnalysisKD")
646 PrincipalComponentAnalysisKDs=list
647 _plural_types.append(
"PrincipalComponentAnalysisKDs")
648 _value_types.append(
"PrincipalComponentAnalysisD<-1>")
651 _object_types.append(
"NearestNeighbor1D")
654 def _object_cast_to_NearestNeighbor1D(o):
655 r"""_object_cast_to_NearestNeighbor1D(Object o) -> NearestNeighbor1D"""
656 return _IMP_algebra._object_cast_to_NearestNeighbor1D(o)
658 _object_types.append(
"NearestNeighbor2D")
661 def _object_cast_to_NearestNeighbor2D(o):
662 r"""_object_cast_to_NearestNeighbor2D(Object o) -> NearestNeighbor2D"""
663 return _IMP_algebra._object_cast_to_NearestNeighbor2D(o)
665 _object_types.append(
"NearestNeighbor3D")
668 def _object_cast_to_NearestNeighbor3D(o):
669 r"""_object_cast_to_NearestNeighbor3D(Object o) -> NearestNeighbor3D"""
670 return _IMP_algebra._object_cast_to_NearestNeighbor3D(o)
672 _object_types.append(
"NearestNeighbor4D")
675 def _object_cast_to_NearestNeighbor4D(o):
676 r"""_object_cast_to_NearestNeighbor4D(Object o) -> NearestNeighbor4D"""
677 return _IMP_algebra._object_cast_to_NearestNeighbor4D(o)
679 _object_types.append(
"NearestNeighbor5D")
682 def _object_cast_to_NearestNeighbor5D(o):
683 r"""_object_cast_to_NearestNeighbor5D(Object o) -> NearestNeighbor5D"""
684 return _IMP_algebra._object_cast_to_NearestNeighbor5D(o)
686 _object_types.append(
"NearestNeighbor6D")
689 def _object_cast_to_NearestNeighbor6D(o):
690 r"""_object_cast_to_NearestNeighbor6D(Object o) -> NearestNeighbor6D"""
691 return _IMP_algebra._object_cast_to_NearestNeighbor6D(o)
693 _object_types.append(
"NearestNeighborKD")
696 def _object_cast_to_NearestNeighborKD(o):
697 r"""_object_cast_to_NearestNeighborKD(Object o) -> NearestNeighborKD"""
698 return _IMP_algebra._object_cast_to_NearestNeighborKD(o)
700 ReferenceFrame3Ds=list
701 _plural_types.append(
"ReferenceFrame3Ds")
702 _value_types.append(
"ReferenceFrame3D")
706 _plural_types.append(
"Gaussian3Ds")
707 _value_types.append(
"Gaussian3D")
710 DefaultEmbedding1Ds=list
711 _plural_types.append(
"DefaultEmbedding1Ds")
712 _value_types.append(
"DefaultEmbedding1D")
715 DefaultEmbedding2Ds=list
716 _plural_types.append(
"DefaultEmbedding2Ds")
717 _value_types.append(
"DefaultEmbedding2D")
720 DefaultEmbedding3Ds=list
721 _plural_types.append(
"DefaultEmbedding3Ds")
722 _value_types.append(
"DefaultEmbedding3D")
725 DefaultEmbedding4Ds=list
726 _plural_types.append(
"DefaultEmbedding4Ds")
727 _value_types.append(
"DefaultEmbedding4D")
730 DefaultEmbedding5Ds=list
731 _plural_types.append(
"DefaultEmbedding5Ds")
732 _value_types.append(
"DefaultEmbedding5D")
735 DefaultEmbedding6Ds=list
736 _plural_types.append(
"DefaultEmbedding6Ds")
737 _value_types.append(
"DefaultEmbedding6D")
740 DefaultEmbedding1Ds=list
741 _plural_types.append(
"DefaultEmbedding1Ds")
742 _value_types.append(
"DefaultEmbeddingD<1>")
745 DefaultEmbedding2Ds=list
746 _plural_types.append(
"DefaultEmbedding2Ds")
747 _value_types.append(
"DefaultEmbeddingD<2>")
750 DefaultEmbedding3Ds=list
751 _plural_types.append(
"DefaultEmbedding3Ds")
752 _value_types.append(
"DefaultEmbeddingD<3>")
755 DefaultEmbedding4Ds=list
756 _plural_types.append(
"DefaultEmbedding4Ds")
757 _value_types.append(
"DefaultEmbeddingD<4>")
760 DefaultEmbedding5Ds=list
761 _plural_types.append(
"DefaultEmbedding5Ds")
762 _value_types.append(
"DefaultEmbeddingD<5>")
765 DefaultEmbedding6Ds=list
766 _plural_types.append(
"DefaultEmbedding6Ds")
767 _value_types.append(
"DefaultEmbeddingD<6>")
770 DefaultEmbeddingKDs=list
771 _plural_types.append(
"DefaultEmbeddingKDs")
772 _value_types.append(
"DefaultEmbeddingKD")
775 DefaultEmbeddingKDs=list
776 _plural_types.append(
"DefaultEmbeddingKDs")
777 _value_types.append(
"DefaultEmbeddingD<-1>")
781 _plural_types.append(
"LogEmbedding1Ds")
782 _value_types.append(
"LogEmbedding1D")
786 _plural_types.append(
"LogEmbedding2Ds")
787 _value_types.append(
"LogEmbedding2D")
791 _plural_types.append(
"LogEmbedding3Ds")
792 _value_types.append(
"LogEmbedding3D")
796 _plural_types.append(
"LogEmbedding4Ds")
797 _value_types.append(
"LogEmbedding4D")
801 _plural_types.append(
"LogEmbedding5Ds")
802 _value_types.append(
"LogEmbedding5D")
806 _plural_types.append(
"LogEmbedding6Ds")
807 _value_types.append(
"LogEmbedding6D")
811 _plural_types.append(
"LogEmbedding1Ds")
812 _value_types.append(
"LogEmbeddingD<1>")
816 _plural_types.append(
"LogEmbedding2Ds")
817 _value_types.append(
"LogEmbeddingD<2>")
821 _plural_types.append(
"LogEmbedding3Ds")
822 _value_types.append(
"LogEmbeddingD<3>")
826 _plural_types.append(
"LogEmbedding4Ds")
827 _value_types.append(
"LogEmbeddingD<4>")
831 _plural_types.append(
"LogEmbedding5Ds")
832 _value_types.append(
"LogEmbeddingD<5>")
836 _plural_types.append(
"LogEmbedding6Ds")
837 _value_types.append(
"LogEmbeddingD<6>")
841 _plural_types.append(
"LogEmbeddingKDs")
842 _value_types.append(
"LogEmbeddingKD")
846 _plural_types.append(
"LogEmbeddingKDs")
847 _value_types.append(
"LogEmbeddingD<-1>")
851 _plural_types.append(
"GridIndex1Ds")
852 _value_types.append(
"GridIndex1D")
856 _plural_types.append(
"GridIndex2Ds")
857 _value_types.append(
"GridIndex2D")
861 _plural_types.append(
"GridIndex3Ds")
862 _value_types.append(
"GridIndex3D")
866 _plural_types.append(
"GridIndex4Ds")
867 _value_types.append(
"GridIndex4D")
871 _plural_types.append(
"GridIndex5Ds")
872 _value_types.append(
"GridIndex5D")
876 _plural_types.append(
"GridIndex6Ds")
877 _value_types.append(
"GridIndex6D")
881 _plural_types.append(
"GridIndex1Ds")
882 _value_types.append(
"GridIndexD<1>")
886 _plural_types.append(
"GridIndex2Ds")
887 _value_types.append(
"GridIndexD<2>")
891 _plural_types.append(
"GridIndex3Ds")
892 _value_types.append(
"GridIndexD<3>")
896 _plural_types.append(
"GridIndex4Ds")
897 _value_types.append(
"GridIndexD<4>")
901 _plural_types.append(
"GridIndex5Ds")
902 _value_types.append(
"GridIndexD<5>")
906 _plural_types.append(
"GridIndex6Ds")
907 _value_types.append(
"GridIndexD<6>")
911 _plural_types.append(
"GridIndexKDs")
912 _value_types.append(
"GridIndexKD")
916 _plural_types.append(
"GridIndexKDs")
917 _value_types.append(
"GridIndexD<-1>")
920 ExtendedGridIndex1Ds=list
921 _plural_types.append(
"ExtendedGridIndex1Ds")
922 _value_types.append(
"ExtendedGridIndex1D")
925 ExtendedGridIndex2Ds=list
926 _plural_types.append(
"ExtendedGridIndex2Ds")
927 _value_types.append(
"ExtendedGridIndex2D")
930 ExtendedGridIndex3Ds=list
931 _plural_types.append(
"ExtendedGridIndex3Ds")
932 _value_types.append(
"ExtendedGridIndex3D")
935 ExtendedGridIndex4Ds=list
936 _plural_types.append(
"ExtendedGridIndex4Ds")
937 _value_types.append(
"ExtendedGridIndex4D")
940 ExtendedGridIndex5Ds=list
941 _plural_types.append(
"ExtendedGridIndex5Ds")
942 _value_types.append(
"ExtendedGridIndex5D")
945 ExtendedGridIndex6Ds=list
946 _plural_types.append(
"ExtendedGridIndex6Ds")
947 _value_types.append(
"ExtendedGridIndex6D")
950 ExtendedGridIndex1Ds=list
951 _plural_types.append(
"ExtendedGridIndex1Ds")
952 _value_types.append(
"ExtendedGridIndexD<1>")
955 ExtendedGridIndex2Ds=list
956 _plural_types.append(
"ExtendedGridIndex2Ds")
957 _value_types.append(
"ExtendedGridIndexD<2>")
960 ExtendedGridIndex3Ds=list
961 _plural_types.append(
"ExtendedGridIndex3Ds")
962 _value_types.append(
"ExtendedGridIndexD<3>")
965 ExtendedGridIndex4Ds=list
966 _plural_types.append(
"ExtendedGridIndex4Ds")
967 _value_types.append(
"ExtendedGridIndexD<4>")
970 ExtendedGridIndex5Ds=list
971 _plural_types.append(
"ExtendedGridIndex5Ds")
972 _value_types.append(
"ExtendedGridIndexD<5>")
975 ExtendedGridIndex6Ds=list
976 _plural_types.append(
"ExtendedGridIndex6Ds")
977 _value_types.append(
"ExtendedGridIndexD<6>")
980 ExtendedGridIndexKDs=list
981 _plural_types.append(
"ExtendedGridIndexKDs")
982 _value_types.append(
"ExtendedGridIndexKD")
985 ExtendedGridIndexKDs=list
986 _plural_types.append(
"ExtendedGridIndexKDs")
987 _value_types.append(
"ExtendedGridIndexD<-1>")
990 BoundedGridRange1Ds=list
991 _plural_types.append(
"BoundedGridRange1Ds")
992 _value_types.append(
"BoundedGridRange1D")
995 BoundedGridRange2Ds=list
996 _plural_types.append(
"BoundedGridRange2Ds")
997 _value_types.append(
"BoundedGridRange2D")
1000 BoundedGridRange3Ds=list
1001 _plural_types.append(
"BoundedGridRange3Ds")
1002 _value_types.append(
"BoundedGridRange3D")
1005 BoundedGridRange4Ds=list
1006 _plural_types.append(
"BoundedGridRange4Ds")
1007 _value_types.append(
"BoundedGridRange4D")
1010 BoundedGridRange5Ds=list
1011 _plural_types.append(
"BoundedGridRange5Ds")
1012 _value_types.append(
"BoundedGridRange5D")
1015 BoundedGridRange6Ds=list
1016 _plural_types.append(
"BoundedGridRange6Ds")
1017 _value_types.append(
"BoundedGridRange6D")
1020 BoundedGridRange1Ds=list
1021 _plural_types.append(
"BoundedGridRange1Ds")
1022 _value_types.append(
"BoundedGridRangeD<1>")
1025 BoundedGridRange2Ds=list
1026 _plural_types.append(
"BoundedGridRange2Ds")
1027 _value_types.append(
"BoundedGridRangeD<2>")
1030 BoundedGridRange3Ds=list
1031 _plural_types.append(
"BoundedGridRange3Ds")
1032 _value_types.append(
"BoundedGridRangeD<3>")
1035 BoundedGridRange4Ds=list
1036 _plural_types.append(
"BoundedGridRange4Ds")
1037 _value_types.append(
"BoundedGridRangeD<4>")
1040 BoundedGridRange5Ds=list
1041 _plural_types.append(
"BoundedGridRange5Ds")
1042 _value_types.append(
"BoundedGridRangeD<5>")
1045 BoundedGridRange6Ds=list
1046 _plural_types.append(
"BoundedGridRange6Ds")
1047 _value_types.append(
"BoundedGridRangeD<6>")
1050 BoundedGridRangeKDs=list
1051 _plural_types.append(
"BoundedGridRangeKDs")
1052 _value_types.append(
"BoundedGridRangeKD")
1055 BoundedGridRangeKDs=list
1056 _plural_types.append(
"BoundedGridRangeKDs")
1057 _value_types.append(
"BoundedGridRangeD<-1>")
1060 UnboundedGridRange1Ds=list
1061 _plural_types.append(
"UnboundedGridRange1Ds")
1062 _value_types.append(
"UnboundedGridRange1D")
1065 UnboundedGridRange2Ds=list
1066 _plural_types.append(
"UnboundedGridRange2Ds")
1067 _value_types.append(
"UnboundedGridRange2D")
1070 UnboundedGridRange3Ds=list
1071 _plural_types.append(
"UnboundedGridRange3Ds")
1072 _value_types.append(
"UnboundedGridRange3D")
1075 UnboundedGridRange4Ds=list
1076 _plural_types.append(
"UnboundedGridRange4Ds")
1077 _value_types.append(
"UnboundedGridRange4D")
1080 UnboundedGridRange5Ds=list
1081 _plural_types.append(
"UnboundedGridRange5Ds")
1082 _value_types.append(
"UnboundedGridRange5D")
1085 UnboundedGridRange6Ds=list
1086 _plural_types.append(
"UnboundedGridRange6Ds")
1087 _value_types.append(
"UnboundedGridRange6D")
1090 UnboundedGridRange1Ds=list
1091 _plural_types.append(
"UnboundedGridRange1Ds")
1092 _value_types.append(
"UnboundedGridRangeD<1>")
1095 UnboundedGridRange2Ds=list
1096 _plural_types.append(
"UnboundedGridRange2Ds")
1097 _value_types.append(
"UnboundedGridRangeD<2>")
1100 UnboundedGridRange3Ds=list
1101 _plural_types.append(
"UnboundedGridRange3Ds")
1102 _value_types.append(
"UnboundedGridRangeD<3>")
1105 UnboundedGridRange4Ds=list
1106 _plural_types.append(
"UnboundedGridRange4Ds")
1107 _value_types.append(
"UnboundedGridRangeD<4>")
1110 UnboundedGridRange5Ds=list
1111 _plural_types.append(
"UnboundedGridRange5Ds")
1112 _value_types.append(
"UnboundedGridRangeD<5>")
1115 UnboundedGridRange6Ds=list
1116 _plural_types.append(
"UnboundedGridRange6Ds")
1117 _value_types.append(
"UnboundedGridRangeD<6>")
1120 UnboundedGridRangeKDs=list
1121 _plural_types.append(
"UnboundedGridRangeKDs")
1122 _value_types.append(
"UnboundedGridRangeKD")
1125 UnboundedGridRangeKDs=list
1126 _plural_types.append(
"UnboundedGridRangeKDs")
1127 _value_types.append(
"UnboundedGridRangeD<-1>")
1131 _plural_types.append(
"LinearFit2Ds")
1132 _value_types.append(
"LinearFit2D")
1135 ParabolicFit2Ds=list
1136 _plural_types.append(
"ParabolicFit2Ds")
1137 _value_types.append(
"ParabolicFit2D")
1141 _plural_types.append(
"FixedXYZs")
1142 _value_types.append(
"FixedXYZ")
1144 class Rotation3D(IMP._GeometricPrimitive3D):
1145 r"""Proxy of C++ IMP::algebra::Rotation3D class."""
1147 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1149 def __init__(self, *args):
1151 __init__(Rotation3D self, Rotation3D rot) -> Rotation3D
1152 __init__(Rotation3D self, Vector4D v, bool assume_normalized=False) -> Rotation3D
1153 __init__(Rotation3D self) -> Rotation3D
1154 __init__(Rotation3D self, double a, double b, double c, double d) -> Rotation3D
1156 _IMP_algebra.Rotation3D_swiginit(self, _IMP_algebra.new_Rotation3D(*args))
1157 __swig_destroy__ = _IMP_algebra.delete_Rotation3D
1159 def get_rotated_no_cache(self, o):
1160 r"""get_rotated_no_cache(Rotation3D self, Vector3D o) -> Vector3D"""
1161 return _IMP_algebra.Rotation3D_get_rotated_no_cache(self, o)
1163 def get_rotated_one_coordinate_no_cache(self, o, coord):
1164 r"""get_rotated_one_coordinate_no_cache(Rotation3D self, Vector3D o, unsigned int coord) -> double"""
1165 return _IMP_algebra.Rotation3D_get_rotated_one_coordinate_no_cache(self, o, coord)
1167 def get_rotated(self, o):
1168 r"""get_rotated(Rotation3D self, Vector3D o) -> Vector3D"""
1169 return _IMP_algebra.Rotation3D_get_rotated(self, o)
1171 def get_rotated_adjoint(self, v, Dw):
1172 r"""get_rotated_adjoint(Rotation3D self, Vector3D v, Vector3D Dw) -> _RotatedVector3DAdjoint"""
1173 return _IMP_algebra.Rotation3D_get_rotated_adjoint(self, v, Dw)
1175 def get_rotated_one_coordinate(self, o, coord):
1176 r"""get_rotated_one_coordinate(Rotation3D self, Vector3D o, unsigned int coord) -> double"""
1177 return _IMP_algebra.Rotation3D_get_rotated_one_coordinate(self, o, coord)
1179 def get_rotation_matrix_row(self, i):
1180 r"""get_rotation_matrix_row(Rotation3D self, int i) -> Vector3D"""
1181 return _IMP_algebra.Rotation3D_get_rotation_matrix_row(self, i)
1183 def show(self, *args):
1184 r"""show(Rotation3D self, _ostream out=std::cout)"""
1185 return _IMP_algebra.Rotation3D_show(self, *args)
1187 def get_inverse(self):
1188 r"""get_inverse(Rotation3D self) -> Rotation3D"""
1189 return _IMP_algebra.Rotation3D_get_inverse(self)
1191 def get_quaternion(self):
1192 r"""get_quaternion(Rotation3D self) -> Vector4D"""
1193 return _IMP_algebra.Rotation3D_get_quaternion(self)
1195 def __mul__(self, *args):
1197 __mul__(Rotation3D self, Vector3D v) -> Vector3D
1198 __mul__(Rotation3D self, Rotation3D q) -> Rotation3D
1200 return _IMP_algebra.Rotation3D___mul__(self, *args)
1202 def __truediv__(self, *args):
1203 return _IMP_algebra.Rotation3D___truediv__(self, *args)
1207 def get_gradient_of_rotated(self, v, i, wrt_unnorm=False):
1208 r"""get_gradient_of_rotated(Rotation3D self, Vector3D v, unsigned int i, bool wrt_unnorm=False) -> Vector3D"""
1209 return _IMP_algebra.Rotation3D_get_gradient_of_rotated(self, v, i, wrt_unnorm)
1211 def get_jacobian_of_rotated(self, v, wrt_unnorm=False):
1212 r"""get_jacobian_of_rotated(Rotation3D self, Eigen::Vector3d const & v, bool wrt_unnorm=False) -> Eigen::MatrixXd"""
1213 return _IMP_algebra.Rotation3D_get_jacobian_of_rotated(self, v, wrt_unnorm)
1215 def get_is_valid(self):
1216 r"""get_is_valid(Rotation3D self) -> bool"""
1217 return _IMP_algebra.Rotation3D_get_is_valid(self)
1220 r"""__str__(Rotation3D self) -> std::string"""
1221 return _IMP_algebra.Rotation3D___str__(self)
1224 r"""__repr__(Rotation3D self) -> std::string"""
1225 return _IMP_algebra.Rotation3D___repr__(self)
1227 def _get_as_binary(self):
1228 r"""_get_as_binary(Rotation3D self) -> PyObject *"""
1229 return _IMP_algebra.Rotation3D__get_as_binary(self)
1231 def _set_from_binary(self, p):
1232 r"""_set_from_binary(Rotation3D self, PyObject * p)"""
1233 return _IMP_algebra.Rotation3D__set_from_binary(self, p)
1235 def __getstate__(self):
1236 p = self._get_as_binary()
1237 if len(self.__dict__) > 1:
1238 d = self.__dict__.copy()
1243 def __setstate__(self, p):
1244 if not hasattr(self,
'this'):
1246 if isinstance(p, tuple):
1248 self.__dict__.update(d)
1249 return self._set_from_binary(p)
1253 _IMP_algebra.Rotation3D_swigregister(Rotation3D)
1256 r"""get_jacobian_of_composed_wrt_first(Rotation3D q, Rotation3D p, bool wrt_unnorm=False) -> Eigen::MatrixXd"""
1257 return _IMP_algebra.get_jacobian_of_composed_wrt_first(q, p, wrt_unnorm)
1260 r"""get_jacobian_of_composed_wrt_second(Rotation3D q, Rotation3D p, bool wrt_unnorm=False) -> Eigen::MatrixXd"""
1261 return _IMP_algebra.get_jacobian_of_composed_wrt_second(q, p, wrt_unnorm)
1264 r"""get_identity_rotation_3d() -> Rotation3D"""
1265 return _IMP_algebra.get_identity_rotation_3d()
1268 r"""get_rotation_about_normalized_axis(Vector3D axis_norm, double angle) -> Rotation3D"""
1269 return _IMP_algebra.get_rotation_about_normalized_axis(axis_norm, angle)
1272 r"""get_rotation_about_axis(Vector3D axis, double angle) -> Rotation3D"""
1273 return _IMP_algebra.get_rotation_about_axis(axis, angle)
1276 r"""get_rotation_taking_first_to_second(Vector3D v1, Vector3D v2) -> Rotation3D"""
1277 return _IMP_algebra.get_rotation_taking_first_to_second(v1, v2)
1281 get_rotation_from_matrix(double m00, double m01, double m02, double m10, double m11, double m12, double m20, double m21, double m22) -> Rotation3D
1282 get_rotation_from_matrix(Eigen::Matrix3d m) -> Rotation3D
1284 return _IMP_algebra.get_rotation_from_matrix(*args)
1288 get_random_rotation_3d() -> Rotation3D
1289 get_random_rotation_3d(Rotation3D center, double distance) -> Rotation3D
1291 return _IMP_algebra.get_random_rotation_3d(*args)
1294 r"""get_uniform_cover_rotations_3d(unsigned int num_points) -> IMP::algebra::Rotation3Ds"""
1295 return _IMP_algebra.get_uniform_cover_rotations_3d(num_points)
1298 r"""get_uniformly_sampled_rotations(double delta) -> IMP::algebra::Rotation3Ds"""
1299 return _IMP_algebra.get_uniformly_sampled_rotations(delta)
1302 r"""get_rotation_from_vector4d(Vector4D v) -> Rotation3D"""
1303 return _IMP_algebra.get_rotation_from_vector4d(v)
1306 r"""get_rotation_from_fixed_xyz(double xr, double yr, double zr) -> Rotation3D"""
1307 return _IMP_algebra.get_rotation_from_fixed_xyz(xr, yr, zr)
1310 r"""get_rotation_from_fixed_zxz(double phi, double theta, double psi) -> Rotation3D"""
1311 return _IMP_algebra.get_rotation_from_fixed_zxz(phi, theta, psi)
1314 r"""get_rotation_from_fixed_zyz(double Rot, double Tilt, double Psi) -> Rotation3D"""
1315 return _IMP_algebra.get_rotation_from_fixed_zyz(Rot, Tilt, Psi)
1316 class FixedXYZ(IMP._GeometricPrimitive3D):
1317 r"""Proxy of C++ IMP::algebra::FixedXYZ class."""
1319 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1321 def __init__(self, *args):
1323 __init__(FixedXYZ self) -> FixedXYZ
1324 __init__(FixedXYZ self, double x, double y, double z) -> FixedXYZ
1326 _IMP_algebra.FixedXYZ_swiginit(self, _IMP_algebra.new_FixedXYZ(*args))
1329 r"""get_x(FixedXYZ self) -> double"""
1330 return _IMP_algebra.FixedXYZ_get_x(self)
1333 r"""get_y(FixedXYZ self) -> double"""
1334 return _IMP_algebra.FixedXYZ_get_y(self)
1337 r"""get_z(FixedXYZ self) -> double"""
1338 return _IMP_algebra.FixedXYZ_get_z(self)
1340 def show(self, *args):
1341 r"""show(FixedXYZ self, _ostream out=std::cout)"""
1342 return _IMP_algebra.FixedXYZ_show(self, *args)
1345 r"""__str__(FixedXYZ self) -> std::string"""
1346 return _IMP_algebra.FixedXYZ___str__(self)
1349 r"""__repr__(FixedXYZ self) -> std::string"""
1350 return _IMP_algebra.FixedXYZ___repr__(self)
1352 def _get_as_binary(self):
1353 r"""_get_as_binary(FixedXYZ self) -> PyObject *"""
1354 return _IMP_algebra.FixedXYZ__get_as_binary(self)
1356 def _set_from_binary(self, p):
1357 r"""_set_from_binary(FixedXYZ self, PyObject * p)"""
1358 return _IMP_algebra.FixedXYZ__set_from_binary(self, p)
1360 def __getstate__(self):
1361 p = self._get_as_binary()
1362 if len(self.__dict__) > 1:
1363 d = self.__dict__.copy()
1368 def __setstate__(self, p):
1369 if not hasattr(self,
'this'):
1371 if isinstance(p, tuple):
1373 self.__dict__.update(d)
1374 return self._set_from_binary(p)
1376 __swig_destroy__ = _IMP_algebra.delete_FixedXYZ
1379 _IMP_algebra.FixedXYZ_swigregister(FixedXYZ)
1382 r"""get_fixed_xyz_from_rotation(Rotation3D r) -> FixedXYZ"""
1383 return _IMP_algebra.get_fixed_xyz_from_rotation(r)
1386 r"""get_interpolated(Rotation3D a, Rotation3D b, double f) -> Rotation3D"""
1387 return _IMP_algebra.get_interpolated(a, b, f)
1390 r"""get_rotation_from_x_y_axes(Vector3D x, Vector3D y) -> Rotation3D"""
1391 return _IMP_algebra.get_rotation_from_x_y_axes(x, y)
1394 r"""get_axis_and_angle(Rotation3D rot) -> _AxisAnglePair"""
1395 return _IMP_algebra.get_axis_and_angle(rot)
1398 r"""get_unit_bounding_box_kd(unsigned int d) -> BoundingBoxKD"""
1399 return _IMP_algebra.get_unit_bounding_box_kd(d)
1402 r"""get_cube_kd(unsigned int d, double radius) -> BoundingBoxKD"""
1403 return _IMP_algebra.get_cube_kd(d, radius)
1406 r"""get_edges(BoundingBox3D arg1) -> IMP::IntPairs"""
1407 return _IMP_algebra.get_edges(arg1)
1408 class Transformation3D(IMP._GeometricPrimitive3D):
1409 r"""Proxy of C++ IMP::algebra::Transformation3D class."""
1411 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1413 def __init__(self, *args):
1415 __init__(Transformation3D self, Transformation3D arg2) -> Transformation3D
1416 __init__(Transformation3D self) -> Transformation3D
1417 __init__(Transformation3D self, Rotation3D r, Vector3D t=IMP::Vector3D(0, 0, 0)) -> Transformation3D
1418 __init__(Transformation3D self, Vector3D t) -> Transformation3D
1420 _IMP_algebra.Transformation3D_swiginit(self, _IMP_algebra.new_Transformation3D(*args))
1421 __swig_destroy__ = _IMP_algebra.delete_Transformation3D
1423 def get_transformed(self, o):
1424 r"""get_transformed(Transformation3D self, Vector3D o) -> Vector3D"""
1425 return _IMP_algebra.Transformation3D_get_transformed(self, o)
1427 def get_transformed_adjoint(self, v, Dw):
1428 r"""get_transformed_adjoint(Transformation3D self, Vector3D v, Vector3D Dw) -> _TransformedVector3DAdjoint"""
1429 return _IMP_algebra.Transformation3D_get_transformed_adjoint(self, v, Dw)
1431 def __mul__(self, *args):
1433 __mul__(Transformation3D self, Vector3D v) -> Vector3D
1434 __mul__(Transformation3D self, Transformation3D tr) -> Transformation3D
1436 return _IMP_algebra.Transformation3D___mul__(self, *args)
1438 def __truediv__(self, *args):
1439 return _IMP_algebra.Transformation3D___truediv__(self, *args)
1443 def get_rotation(self):
1444 r"""get_rotation(Transformation3D self) -> Rotation3D"""
1445 return _IMP_algebra.Transformation3D_get_rotation(self)
1447 def get_translation(self):
1448 r"""get_translation(Transformation3D self) -> Vector3D"""
1449 return _IMP_algebra.Transformation3D_get_translation(self)
1451 def show(self, *args):
1452 r"""show(Transformation3D self, _ostream out=std::cout)"""
1453 return _IMP_algebra.Transformation3D_show(self, *args)
1455 def get_inverse(self):
1456 r"""get_inverse(Transformation3D self) -> Transformation3D"""
1457 return _IMP_algebra.Transformation3D_get_inverse(self)
1459 def get_is_valid(self):
1460 r"""get_is_valid(Transformation3D self) -> bool"""
1461 return _IMP_algebra.Transformation3D_get_is_valid(self)
1464 r"""__str__(Transformation3D self) -> std::string"""
1465 return _IMP_algebra.Transformation3D___str__(self)
1468 r"""__repr__(Transformation3D self) -> std::string"""
1469 return _IMP_algebra.Transformation3D___repr__(self)
1471 def _get_as_binary(self):
1472 r"""_get_as_binary(Transformation3D self) -> PyObject *"""
1473 return _IMP_algebra.Transformation3D__get_as_binary(self)
1475 def _set_from_binary(self, p):
1476 r"""_set_from_binary(Transformation3D self, PyObject * p)"""
1477 return _IMP_algebra.Transformation3D__set_from_binary(self, p)
1479 def __getstate__(self):
1480 p = self._get_as_binary()
1481 if len(self.__dict__) > 1:
1482 d = self.__dict__.copy()
1487 def __setstate__(self, p):
1488 if not hasattr(self,
'this'):
1490 if isinstance(p, tuple):
1492 self.__dict__.update(d)
1493 return self._set_from_binary(p)
1497 _IMP_algebra.Transformation3D_swigregister(Transformation3D)
1500 r"""get_identity_transformation_3d() -> Transformation3D"""
1501 return _IMP_algebra.get_identity_transformation_3d()
1505 compose_adjoint(Rotation3D A, Rotation3D B, Vector4D DC) -> _ComposeRotation3DAdjoint
1506 compose_adjoint(Transformation3D TA, Transformation3D TB, _Transformation3DAdjoint DTC) -> _ComposeTransformation3DAdjoint
1508 return _IMP_algebra.compose_adjoint(*args)
1511 r"""get_transformation_3d(Transformation2D t2d) -> Transformation3D"""
1512 return _IMP_algebra.get_transformation_3d(t2d)
1515 r"""get_random_local_transformation(Vector3D origin, double max_translation=5., double max_angle_in_rad=0.26) -> Transformation3D"""
1516 return _IMP_algebra.get_random_local_transformation(origin, max_translation, max_angle_in_rad)
1517 class Rotation2D(IMP._GeometricPrimitive2D):
1518 r"""Proxy of C++ IMP::algebra::Rotation2D class."""
1520 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1522 def __init__(self, *args):
1524 __init__(Rotation2D self) -> Rotation2D
1525 __init__(Rotation2D self, double angle) -> Rotation2D
1527 _IMP_algebra.Rotation2D_swiginit(self, _IMP_algebra.new_Rotation2D(*args))
1529 def get_rotated(self, *args):
1531 get_rotated(Rotation2D self, Vector2D o) -> Vector2D
1532 get_rotated(Rotation2D self, double const x, double const y) -> Vector2D
1534 return _IMP_algebra.Rotation2D_get_rotated(self, *args)
1536 def get_inverse(self):
1537 r"""get_inverse(Rotation2D self) -> Rotation2D"""
1538 return _IMP_algebra.Rotation2D_get_inverse(self)
1540 def set_angle(self, angle):
1541 r"""set_angle(Rotation2D self, double angle)"""
1542 return _IMP_algebra.Rotation2D_set_angle(self, angle)
1545 r"""get_angle(Rotation2D self) -> double"""
1546 return _IMP_algebra.Rotation2D_get_angle(self)
1548 def show(self, *args):
1549 r"""show(Rotation2D self, _ostream out=std::cout)"""
1550 return _IMP_algebra.Rotation2D_show(self, *args)
1553 r"""__str__(Rotation2D self) -> std::string"""
1554 return _IMP_algebra.Rotation2D___str__(self)
1557 r"""__repr__(Rotation2D self) -> std::string"""
1558 return _IMP_algebra.Rotation2D___repr__(self)
1560 def _get_as_binary(self):
1561 r"""_get_as_binary(Rotation2D self) -> PyObject *"""
1562 return _IMP_algebra.Rotation2D__get_as_binary(self)
1564 def _set_from_binary(self, p):
1565 r"""_set_from_binary(Rotation2D self, PyObject * p)"""
1566 return _IMP_algebra.Rotation2D__set_from_binary(self, p)
1568 def __getstate__(self):
1569 p = self._get_as_binary()
1570 if len(self.__dict__) > 1:
1571 d = self.__dict__.copy()
1576 def __setstate__(self, p):
1577 if not hasattr(self,
'this'):
1579 if isinstance(p, tuple):
1581 self.__dict__.update(d)
1582 return self._set_from_binary(p)
1584 __swig_destroy__ = _IMP_algebra.delete_Rotation2D
1587 _IMP_algebra.Rotation2D_swigregister(Rotation2D)
1590 r"""get_identity_rotation_2d() -> Rotation2D"""
1591 return _IMP_algebra.get_identity_rotation_2d()
1594 r"""get_random_rotation_2d() -> Rotation2D"""
1595 return _IMP_algebra.get_random_rotation_2d()
1598 r"""get_rotation_to_x_axis(Vector2D v) -> Rotation2D"""
1599 return _IMP_algebra.get_rotation_to_x_axis(v)
1600 class Transformation2D(IMP._GeometricPrimitive2D):
1601 r"""Proxy of C++ IMP::algebra::Transformation2D class."""
1603 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1605 def __init__(self, *args):
1607 __init__(Transformation2D self, Transformation2D arg2) -> Transformation2D
1608 __init__(Transformation2D self) -> Transformation2D
1609 __init__(Transformation2D self, Rotation2D r, Vector2D t=IMP::Vector2D(0.0, 0.0)) -> Transformation2D
1610 __init__(Transformation2D self, Vector2D t) -> Transformation2D
1612 _IMP_algebra.Transformation2D_swiginit(self, _IMP_algebra.new_Transformation2D(*args))
1613 __swig_destroy__ = _IMP_algebra.delete_Transformation2D
1615 def get_transformed(self, o):
1616 r"""get_transformed(Transformation2D self, Vector2D o) -> Vector2D"""
1617 return _IMP_algebra.Transformation2D_get_transformed(self, o)
1619 def __mul__(self, *args):
1621 __mul__(Transformation2D self, Vector2D v) -> Vector2D
1622 __mul__(Transformation2D self, Transformation2D tr) -> Transformation2D
1624 return _IMP_algebra.Transformation2D___mul__(self, *args)
1626 def __truediv__(self, *args):
1627 return _IMP_algebra.Transformation2D___truediv__(self, *args)
1631 def get_rotation(self):
1632 r"""get_rotation(Transformation2D self) -> Rotation2D"""
1633 return _IMP_algebra.Transformation2D_get_rotation(self)
1635 def set_rotation(self, angle):
1636 r"""set_rotation(Transformation2D self, double angle)"""
1637 return _IMP_algebra.Transformation2D_set_rotation(self, angle)
1639 def get_translation(self):
1640 r"""get_translation(Transformation2D self) -> Vector2D"""
1641 return _IMP_algebra.Transformation2D_get_translation(self)
1643 def set_translation(self, v):
1644 r"""set_translation(Transformation2D self, Vector2D v)"""
1645 return _IMP_algebra.Transformation2D_set_translation(self, v)
1647 def show(self, *args):
1648 r"""show(Transformation2D self, _ostream out=std::cout)"""
1649 return _IMP_algebra.Transformation2D_show(self, *args)
1651 def get_inverse(self):
1652 r"""get_inverse(Transformation2D self) -> Transformation2D"""
1653 return _IMP_algebra.Transformation2D_get_inverse(self)
1656 r"""__str__(Transformation2D self) -> std::string"""
1657 return _IMP_algebra.Transformation2D___str__(self)
1660 r"""__repr__(Transformation2D self) -> std::string"""
1661 return _IMP_algebra.Transformation2D___repr__(self)
1663 def _get_as_binary(self):
1664 r"""_get_as_binary(Transformation2D self) -> PyObject *"""
1665 return _IMP_algebra.Transformation2D__get_as_binary(self)
1667 def _set_from_binary(self, p):
1668 r"""_set_from_binary(Transformation2D self, PyObject * p)"""
1669 return _IMP_algebra.Transformation2D__set_from_binary(self, p)
1671 def __getstate__(self):
1672 p = self._get_as_binary()
1673 if len(self.__dict__) > 1:
1674 d = self.__dict__.copy()
1679 def __setstate__(self, p):
1680 if not hasattr(self,
'this'):
1682 if isinstance(p, tuple):
1684 self.__dict__.update(d)
1685 return self._set_from_binary(p)
1689 _IMP_algebra.Transformation2D_swigregister(Transformation2D)
1692 r"""get_identity_transformation_2d() -> Transformation2D"""
1693 return _IMP_algebra.get_identity_transformation_2d()
1697 get_rotation_about_point(Vector3D point, Rotation3D rotation) -> Transformation3D
1698 get_rotation_about_point(Vector2D point, Rotation2D rotation) -> Transformation2D
1700 return _IMP_algebra.get_rotation_about_point(*args)
1704 compose(Rotation3D a, Rotation3D b) -> Rotation3D
1705 compose(Transformation3D a, Transformation3D b) -> Transformation3D
1706 compose(Rotation2D a, Rotation2D b) -> Rotation2D
1707 compose(Transformation2D a, Transformation2D b) -> Transformation2D
1709 return _IMP_algebra.compose(*args)
1711 def get_unit_sphere_kd(d):
1712 r"""get_unit_sphere_kd(unsigned int d) -> SphereKD"""
1713 return _IMP_algebra.get_unit_sphere_kd(d)
1717 get_enclosing_sphere(IMP::algebra::Sphere3Ds const & ss) -> Sphere3D
1718 get_enclosing_sphere(IMP::algebra::Vector3Ds const & ss) -> Sphere3D
1720 return _IMP_algebra.get_enclosing_sphere(*args)
1723 r"""get_ball_radius_from_volume_3d(double volume) -> double"""
1724 return _IMP_algebra.get_ball_radius_from_volume_3d(volume)
1727 r"""get_surface_area_and_volume(IMP::algebra::Sphere3Ds const & ss) -> IMP::FloatPair"""
1728 return _IMP_algebra.get_surface_area_and_volume(ss)
1731 r"""get_simplified_from_volume(IMP::algebra::Sphere3Ds _in, double maximum_allowed_error_angstroms) -> IMP::algebra::Sphere3Ds"""
1732 return _IMP_algebra.get_simplified_from_volume(_in, maximum_allowed_error_angstroms)
1734 def get_triangle_3d(s):
1735 r"""get_triangle_3d(UnitSimplex3D s) -> Triangle3D"""
1736 return _IMP_algebra.get_triangle_3d(s)
1737 class _UnitSimplexBaseKD(IMP._GeometricPrimitiveKD):
1738 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< -1 > class."""
1740 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1742 def __init__(self, *args, **kwargs):
1743 raise AttributeError(
"No constructor defined - class is abstract")
1744 __repr__ = _swig_repr
1746 def get_dimension(self):
1747 r"""get_dimension(_UnitSimplexBaseKD self) -> int"""
1748 return _IMP_algebra._UnitSimplexBaseKD_get_dimension(self)
1750 def get_barycenter(self):
1751 r"""get_barycenter(_UnitSimplexBaseKD self) -> VectorKD"""
1752 return _IMP_algebra._UnitSimplexBaseKD_get_barycenter(self)
1754 def get_contains(self, *args):
1755 r"""get_contains(_UnitSimplexBaseKD self, VectorKD p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
1756 return _IMP_algebra._UnitSimplexBaseKD_get_contains(self, *args)
1757 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBaseKD
1760 _IMP_algebra._UnitSimplexBaseKD_swigregister(_UnitSimplexBaseKD)
1761 class _UnitSimplexBase1D(IMP._GeometricPrimitive1D):
1762 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 1 > class."""
1764 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1766 def __init__(self, *args, **kwargs):
1767 raise AttributeError(
"No constructor defined - class is abstract")
1768 __repr__ = _swig_repr
1770 def get_dimension(self):
1771 r"""get_dimension(_UnitSimplexBase1D self) -> int"""
1772 return _IMP_algebra._UnitSimplexBase1D_get_dimension(self)
1774 def get_barycenter(self):
1775 r"""get_barycenter(_UnitSimplexBase1D self) -> Vector1D"""
1776 return _IMP_algebra._UnitSimplexBase1D_get_barycenter(self)
1778 def get_contains(self, *args):
1779 r"""get_contains(_UnitSimplexBase1D self, Vector1D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
1780 return _IMP_algebra._UnitSimplexBase1D_get_contains(self, *args)
1781 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase1D
1784 _IMP_algebra._UnitSimplexBase1D_swigregister(_UnitSimplexBase1D)
1785 class _UnitSimplexBase2D(IMP._GeometricPrimitive2D):
1786 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 2 > class."""
1788 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1790 def __init__(self, *args, **kwargs):
1791 raise AttributeError(
"No constructor defined - class is abstract")
1792 __repr__ = _swig_repr
1794 def get_dimension(self):
1795 r"""get_dimension(_UnitSimplexBase2D self) -> int"""
1796 return _IMP_algebra._UnitSimplexBase2D_get_dimension(self)
1798 def get_barycenter(self):
1799 r"""get_barycenter(_UnitSimplexBase2D self) -> Vector2D"""
1800 return _IMP_algebra._UnitSimplexBase2D_get_barycenter(self)
1802 def get_contains(self, *args):
1803 r"""get_contains(_UnitSimplexBase2D self, Vector2D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
1804 return _IMP_algebra._UnitSimplexBase2D_get_contains(self, *args)
1805 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase2D
1808 _IMP_algebra._UnitSimplexBase2D_swigregister(_UnitSimplexBase2D)
1809 class _UnitSimplexBase3D(IMP._GeometricPrimitive3D):
1810 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 3 > class."""
1812 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1814 def __init__(self, *args, **kwargs):
1815 raise AttributeError(
"No constructor defined - class is abstract")
1816 __repr__ = _swig_repr
1818 def get_dimension(self):
1819 r"""get_dimension(_UnitSimplexBase3D self) -> int"""
1820 return _IMP_algebra._UnitSimplexBase3D_get_dimension(self)
1822 def get_barycenter(self):
1823 r"""get_barycenter(_UnitSimplexBase3D self) -> Vector3D"""
1824 return _IMP_algebra._UnitSimplexBase3D_get_barycenter(self)
1826 def get_contains(self, *args):
1827 r"""get_contains(_UnitSimplexBase3D self, Vector3D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
1828 return _IMP_algebra._UnitSimplexBase3D_get_contains(self, *args)
1829 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase3D
1832 _IMP_algebra._UnitSimplexBase3D_swigregister(_UnitSimplexBase3D)
1833 class _UnitSimplexBase4D(IMP._GeometricPrimitive4D):
1834 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 4 > class."""
1836 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1838 def __init__(self, *args, **kwargs):
1839 raise AttributeError(
"No constructor defined - class is abstract")
1840 __repr__ = _swig_repr
1842 def get_dimension(self):
1843 r"""get_dimension(_UnitSimplexBase4D self) -> int"""
1844 return _IMP_algebra._UnitSimplexBase4D_get_dimension(self)
1846 def get_barycenter(self):
1847 r"""get_barycenter(_UnitSimplexBase4D self) -> Vector4D"""
1848 return _IMP_algebra._UnitSimplexBase4D_get_barycenter(self)
1850 def get_contains(self, *args):
1851 r"""get_contains(_UnitSimplexBase4D self, Vector4D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
1852 return _IMP_algebra._UnitSimplexBase4D_get_contains(self, *args)
1853 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase4D
1856 _IMP_algebra._UnitSimplexBase4D_swigregister(_UnitSimplexBase4D)
1857 class _UnitSimplexBase5D(IMP._GeometricPrimitive5D):
1858 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 5 > class."""
1860 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1862 def __init__(self, *args, **kwargs):
1863 raise AttributeError(
"No constructor defined - class is abstract")
1864 __repr__ = _swig_repr
1866 def get_dimension(self):
1867 r"""get_dimension(_UnitSimplexBase5D self) -> int"""
1868 return _IMP_algebra._UnitSimplexBase5D_get_dimension(self)
1870 def get_barycenter(self):
1871 r"""get_barycenter(_UnitSimplexBase5D self) -> Vector5D"""
1872 return _IMP_algebra._UnitSimplexBase5D_get_barycenter(self)
1874 def get_contains(self, *args):
1875 r"""get_contains(_UnitSimplexBase5D self, Vector5D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
1876 return _IMP_algebra._UnitSimplexBase5D_get_contains(self, *args)
1877 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase5D
1880 _IMP_algebra._UnitSimplexBase5D_swigregister(_UnitSimplexBase5D)
1881 class _UnitSimplexBase6D(IMP._GeometricPrimitive6D):
1882 r"""Proxy of C++ IMP::algebra::UnitSimplexBaseD< 6 > class."""
1884 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1886 def __init__(self, *args, **kwargs):
1887 raise AttributeError(
"No constructor defined - class is abstract")
1888 __repr__ = _swig_repr
1890 def get_dimension(self):
1891 r"""get_dimension(_UnitSimplexBase6D self) -> int"""
1892 return _IMP_algebra._UnitSimplexBase6D_get_dimension(self)
1894 def get_barycenter(self):
1895 r"""get_barycenter(_UnitSimplexBase6D self) -> Vector6D"""
1896 return _IMP_algebra._UnitSimplexBase6D_get_barycenter(self)
1898 def get_contains(self, *args):
1899 r"""get_contains(_UnitSimplexBase6D self, Vector6D p, double atol=std::numeric_limits< double >::epsilon()) -> bool"""
1900 return _IMP_algebra._UnitSimplexBase6D_get_contains(self, *args)
1901 __swig_destroy__ = _IMP_algebra.delete__UnitSimplexBase6D
1904 _IMP_algebra._UnitSimplexBase6D_swigregister(_UnitSimplexBase6D)
1906 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 1 > class."""
1908 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
1910 def get_dimension(self):
1911 r"""get_dimension(BoundingBox1D self) -> unsigned int"""
1912 return _IMP_algebra.BoundingBox1D_get_dimension(self)
1914 def get_corner(self, i):
1915 r"""get_corner(BoundingBox1D self, unsigned int i) -> Vector1D"""
1916 return _IMP_algebra.BoundingBox1D_get_corner(self, i)
1918 def get_corner_0(self):
1919 r"""get_corner_0(BoundingBox1D self) -> Vector1D"""
1920 return _IMP_algebra.BoundingBox1D_get_corner_0(self)
1922 def get_corner_1(self):
1923 r"""get_corner_1(BoundingBox1D self) -> Vector1D"""
1924 return _IMP_algebra.BoundingBox1D_get_corner_1(self)
1926 def get_contains(self, *args):
1928 get_contains(BoundingBox1D self, Vector1D o) -> bool
1929 get_contains(BoundingBox1D self, BoundingBox1D bb) -> bool
1931 return _IMP_algebra.BoundingBox1D_get_contains(self, *args)
1933 def show(self, *args):
1934 r"""show(BoundingBox1D self, _ostream out=std::cout)"""
1935 return _IMP_algebra.BoundingBox1D_show(self, *args)
1938 r"""__str__(BoundingBox1D self) -> std::string"""
1939 return _IMP_algebra.BoundingBox1D___str__(self)
1942 r"""__repr__(BoundingBox1D self) -> std::string"""
1943 return _IMP_algebra.BoundingBox1D___repr__(self)
1945 def __cmp__(self, arg2):
1946 r"""__cmp__(BoundingBox1D self, BoundingBox1D arg2) -> int"""
1947 return _IMP_algebra.BoundingBox1D___cmp__(self, arg2)
1949 def __eq__(self, arg2):
1950 r"""__eq__(BoundingBox1D self, BoundingBox1D arg2) -> bool"""
1951 return _IMP_algebra.BoundingBox1D___eq__(self, arg2)
1953 def __init__(self, *args):
1955 __init__(BoundingBox1D self, unsigned int d) -> BoundingBox1D
1956 __init__(BoundingBox1D self, Vector1D lb, Vector1D ub) -> BoundingBox1D
1957 __init__(BoundingBox1D self, Vector1D v) -> BoundingBox1D
1958 __init__(BoundingBox1D self, IMP::Vector< IMP::algebra::VectorD< 1 > > const & points) -> BoundingBox1D
1959 __init__(BoundingBox1D self) -> BoundingBox1D
1961 _IMP_algebra.BoundingBox1D_swiginit(self, _IMP_algebra.new_BoundingBox1D(*args))
1963 def __getitem__(self, index):
1964 r"""__getitem__(BoundingBox1D self, unsigned int index) -> Vector1D"""
1965 return _IMP_algebra.BoundingBox1D___getitem__(self, index)
1967 def __iadd__(self, *args):
1968 _IMP_algebra.BoundingBox1D___iadd__(self, *args)
1974 r"""__len__(BoundingBox1D self) -> unsigned int"""
1975 return _IMP_algebra.BoundingBox1D___len__(self)
1977 def __add__(self, *args):
1979 __add__(BoundingBox1D self, BoundingBox1D o) -> BoundingBox1D
1980 __add__(BoundingBox1D self, Vector1D o) -> BoundingBox1D
1981 __add__(BoundingBox1D self, double o) -> BoundingBox1D
1983 return _IMP_algebra.BoundingBox1D___add__(self, *args)
1985 def _get_as_binary(self):
1986 r"""_get_as_binary(BoundingBox1D self) -> PyObject *"""
1987 return _IMP_algebra.BoundingBox1D__get_as_binary(self)
1989 def _set_from_binary(self, p):
1990 r"""_set_from_binary(BoundingBox1D self, PyObject * p)"""
1991 return _IMP_algebra.BoundingBox1D__set_from_binary(self, p)
1993 def __getstate__(self):
1994 p = self._get_as_binary()
1995 if len(self.__dict__) > 1:
1996 d = self.__dict__.copy()
2001 def __setstate__(self, p):
2002 if not hasattr(self,
'this'):
2004 if isinstance(p, tuple):
2006 self.__dict__.update(d)
2007 return self._set_from_binary(p)
2009 __swig_destroy__ = _IMP_algebra.delete_BoundingBox1D
2012 _IMP_algebra.BoundingBox1D_swigregister(BoundingBox1D)
2014 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 2 > class."""
2016 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2018 def get_dimension(self):
2019 r"""get_dimension(BoundingBox2D self) -> unsigned int"""
2020 return _IMP_algebra.BoundingBox2D_get_dimension(self)
2022 def get_corner(self, i):
2023 r"""get_corner(BoundingBox2D self, unsigned int i) -> Vector2D"""
2024 return _IMP_algebra.BoundingBox2D_get_corner(self, i)
2026 def get_corner_0(self):
2027 r"""get_corner_0(BoundingBox2D self) -> Vector2D"""
2028 return _IMP_algebra.BoundingBox2D_get_corner_0(self)
2030 def get_corner_1(self):
2031 r"""get_corner_1(BoundingBox2D self) -> Vector2D"""
2032 return _IMP_algebra.BoundingBox2D_get_corner_1(self)
2034 def get_contains(self, *args):
2036 get_contains(BoundingBox2D self, Vector2D o) -> bool
2037 get_contains(BoundingBox2D self, BoundingBox2D bb) -> bool
2039 return _IMP_algebra.BoundingBox2D_get_contains(self, *args)
2041 def show(self, *args):
2042 r"""show(BoundingBox2D self, _ostream out=std::cout)"""
2043 return _IMP_algebra.BoundingBox2D_show(self, *args)
2046 r"""__str__(BoundingBox2D self) -> std::string"""
2047 return _IMP_algebra.BoundingBox2D___str__(self)
2050 r"""__repr__(BoundingBox2D self) -> std::string"""
2051 return _IMP_algebra.BoundingBox2D___repr__(self)
2053 def __cmp__(self, arg2):
2054 r"""__cmp__(BoundingBox2D self, BoundingBox2D arg2) -> int"""
2055 return _IMP_algebra.BoundingBox2D___cmp__(self, arg2)
2057 def __eq__(self, arg2):
2058 r"""__eq__(BoundingBox2D self, BoundingBox2D arg2) -> bool"""
2059 return _IMP_algebra.BoundingBox2D___eq__(self, arg2)
2061 def __init__(self, *args):
2063 __init__(BoundingBox2D self, unsigned int d) -> BoundingBox2D
2064 __init__(BoundingBox2D self, Vector2D lb, Vector2D ub) -> BoundingBox2D
2065 __init__(BoundingBox2D self, Vector2D v) -> BoundingBox2D
2066 __init__(BoundingBox2D self, IMP::Vector< IMP::algebra::VectorD< 2 > > const & points) -> BoundingBox2D
2067 __init__(BoundingBox2D self) -> BoundingBox2D
2069 _IMP_algebra.BoundingBox2D_swiginit(self, _IMP_algebra.new_BoundingBox2D(*args))
2071 def __getitem__(self, index):
2072 r"""__getitem__(BoundingBox2D self, unsigned int index) -> Vector2D"""
2073 return _IMP_algebra.BoundingBox2D___getitem__(self, index)
2075 def __iadd__(self, *args):
2076 _IMP_algebra.BoundingBox2D___iadd__(self, *args)
2082 r"""__len__(BoundingBox2D self) -> unsigned int"""
2083 return _IMP_algebra.BoundingBox2D___len__(self)
2085 def __add__(self, *args):
2087 __add__(BoundingBox2D self, BoundingBox2D o) -> BoundingBox2D
2088 __add__(BoundingBox2D self, Vector2D o) -> BoundingBox2D
2089 __add__(BoundingBox2D self, double o) -> BoundingBox2D
2091 return _IMP_algebra.BoundingBox2D___add__(self, *args)
2093 def _get_as_binary(self):
2094 r"""_get_as_binary(BoundingBox2D self) -> PyObject *"""
2095 return _IMP_algebra.BoundingBox2D__get_as_binary(self)
2097 def _set_from_binary(self, p):
2098 r"""_set_from_binary(BoundingBox2D self, PyObject * p)"""
2099 return _IMP_algebra.BoundingBox2D__set_from_binary(self, p)
2101 def __getstate__(self):
2102 p = self._get_as_binary()
2103 if len(self.__dict__) > 1:
2104 d = self.__dict__.copy()
2109 def __setstate__(self, p):
2110 if not hasattr(self,
'this'):
2112 if isinstance(p, tuple):
2114 self.__dict__.update(d)
2115 return self._set_from_binary(p)
2117 __swig_destroy__ = _IMP_algebra.delete_BoundingBox2D
2120 _IMP_algebra.BoundingBox2D_swigregister(BoundingBox2D)
2122 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 3 > class."""
2124 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2126 def get_dimension(self):
2127 r"""get_dimension(BoundingBox3D self) -> unsigned int"""
2128 return _IMP_algebra.BoundingBox3D_get_dimension(self)
2130 def get_corner(self, i):
2131 r"""get_corner(BoundingBox3D self, unsigned int i) -> Vector3D"""
2132 return _IMP_algebra.BoundingBox3D_get_corner(self, i)
2134 def get_corner_0(self):
2135 r"""get_corner_0(BoundingBox3D self) -> Vector3D"""
2136 return _IMP_algebra.BoundingBox3D_get_corner_0(self)
2138 def get_corner_1(self):
2139 r"""get_corner_1(BoundingBox3D self) -> Vector3D"""
2140 return _IMP_algebra.BoundingBox3D_get_corner_1(self)
2142 def get_contains(self, *args):
2144 get_contains(BoundingBox3D self, Vector3D o) -> bool
2145 get_contains(BoundingBox3D self, BoundingBox3D bb) -> bool
2147 return _IMP_algebra.BoundingBox3D_get_contains(self, *args)
2149 def show(self, *args):
2150 r"""show(BoundingBox3D self, _ostream out=std::cout)"""
2151 return _IMP_algebra.BoundingBox3D_show(self, *args)
2154 r"""__str__(BoundingBox3D self) -> std::string"""
2155 return _IMP_algebra.BoundingBox3D___str__(self)
2158 r"""__repr__(BoundingBox3D self) -> std::string"""
2159 return _IMP_algebra.BoundingBox3D___repr__(self)
2161 def __cmp__(self, arg2):
2162 r"""__cmp__(BoundingBox3D self, BoundingBox3D arg2) -> int"""
2163 return _IMP_algebra.BoundingBox3D___cmp__(self, arg2)
2165 def __eq__(self, arg2):
2166 r"""__eq__(BoundingBox3D self, BoundingBox3D arg2) -> bool"""
2167 return _IMP_algebra.BoundingBox3D___eq__(self, arg2)
2169 def __init__(self, *args):
2171 __init__(BoundingBox3D self, unsigned int d) -> BoundingBox3D
2172 __init__(BoundingBox3D self, Vector3D lb, Vector3D ub) -> BoundingBox3D
2173 __init__(BoundingBox3D self, Vector3D v) -> BoundingBox3D
2174 __init__(BoundingBox3D self, IMP::Vector< IMP::algebra::VectorD< 3 > > const & points) -> BoundingBox3D
2175 __init__(BoundingBox3D self) -> BoundingBox3D
2177 _IMP_algebra.BoundingBox3D_swiginit(self, _IMP_algebra.new_BoundingBox3D(*args))
2179 def __getitem__(self, index):
2180 r"""__getitem__(BoundingBox3D self, unsigned int index) -> Vector3D"""
2181 return _IMP_algebra.BoundingBox3D___getitem__(self, index)
2183 def __iadd__(self, *args):
2184 _IMP_algebra.BoundingBox3D___iadd__(self, *args)
2190 r"""__len__(BoundingBox3D self) -> unsigned int"""
2191 return _IMP_algebra.BoundingBox3D___len__(self)
2193 def __add__(self, *args):
2195 __add__(BoundingBox3D self, BoundingBox3D o) -> BoundingBox3D
2196 __add__(BoundingBox3D self, Vector3D o) -> BoundingBox3D
2197 __add__(BoundingBox3D self, double o) -> BoundingBox3D
2199 return _IMP_algebra.BoundingBox3D___add__(self, *args)
2201 def _get_as_binary(self):
2202 r"""_get_as_binary(BoundingBox3D self) -> PyObject *"""
2203 return _IMP_algebra.BoundingBox3D__get_as_binary(self)
2205 def _set_from_binary(self, p):
2206 r"""_set_from_binary(BoundingBox3D self, PyObject * p)"""
2207 return _IMP_algebra.BoundingBox3D__set_from_binary(self, p)
2209 def __getstate__(self):
2210 p = self._get_as_binary()
2211 if len(self.__dict__) > 1:
2212 d = self.__dict__.copy()
2217 def __setstate__(self, p):
2218 if not hasattr(self,
'this'):
2220 if isinstance(p, tuple):
2222 self.__dict__.update(d)
2223 return self._set_from_binary(p)
2225 __swig_destroy__ = _IMP_algebra.delete_BoundingBox3D
2228 _IMP_algebra.BoundingBox3D_swigregister(BoundingBox3D)
2230 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 4 > class."""
2232 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2234 def get_dimension(self):
2235 r"""get_dimension(BoundingBox4D self) -> unsigned int"""
2236 return _IMP_algebra.BoundingBox4D_get_dimension(self)
2238 def get_corner(self, i):
2239 r"""get_corner(BoundingBox4D self, unsigned int i) -> Vector4D"""
2240 return _IMP_algebra.BoundingBox4D_get_corner(self, i)
2242 def get_corner_0(self):
2243 r"""get_corner_0(BoundingBox4D self) -> Vector4D"""
2244 return _IMP_algebra.BoundingBox4D_get_corner_0(self)
2246 def get_corner_1(self):
2247 r"""get_corner_1(BoundingBox4D self) -> Vector4D"""
2248 return _IMP_algebra.BoundingBox4D_get_corner_1(self)
2250 def get_contains(self, *args):
2252 get_contains(BoundingBox4D self, Vector4D o) -> bool
2253 get_contains(BoundingBox4D self, BoundingBox4D bb) -> bool
2255 return _IMP_algebra.BoundingBox4D_get_contains(self, *args)
2257 def show(self, *args):
2258 r"""show(BoundingBox4D self, _ostream out=std::cout)"""
2259 return _IMP_algebra.BoundingBox4D_show(self, *args)
2262 r"""__str__(BoundingBox4D self) -> std::string"""
2263 return _IMP_algebra.BoundingBox4D___str__(self)
2266 r"""__repr__(BoundingBox4D self) -> std::string"""
2267 return _IMP_algebra.BoundingBox4D___repr__(self)
2269 def __cmp__(self, arg2):
2270 r"""__cmp__(BoundingBox4D self, BoundingBox4D arg2) -> int"""
2271 return _IMP_algebra.BoundingBox4D___cmp__(self, arg2)
2273 def __eq__(self, arg2):
2274 r"""__eq__(BoundingBox4D self, BoundingBox4D arg2) -> bool"""
2275 return _IMP_algebra.BoundingBox4D___eq__(self, arg2)
2277 def __init__(self, *args):
2279 __init__(BoundingBox4D self, unsigned int d) -> BoundingBox4D
2280 __init__(BoundingBox4D self, Vector4D lb, Vector4D ub) -> BoundingBox4D
2281 __init__(BoundingBox4D self, Vector4D v) -> BoundingBox4D
2282 __init__(BoundingBox4D self, IMP::Vector< IMP::algebra::VectorD< 4 > > const & points) -> BoundingBox4D
2283 __init__(BoundingBox4D self) -> BoundingBox4D
2285 _IMP_algebra.BoundingBox4D_swiginit(self, _IMP_algebra.new_BoundingBox4D(*args))
2287 def __getitem__(self, index):
2288 r"""__getitem__(BoundingBox4D self, unsigned int index) -> Vector4D"""
2289 return _IMP_algebra.BoundingBox4D___getitem__(self, index)
2291 def __iadd__(self, *args):
2292 _IMP_algebra.BoundingBox4D___iadd__(self, *args)
2298 r"""__len__(BoundingBox4D self) -> unsigned int"""
2299 return _IMP_algebra.BoundingBox4D___len__(self)
2301 def __add__(self, *args):
2303 __add__(BoundingBox4D self, BoundingBox4D o) -> BoundingBox4D
2304 __add__(BoundingBox4D self, Vector4D o) -> BoundingBox4D
2305 __add__(BoundingBox4D self, double o) -> BoundingBox4D
2307 return _IMP_algebra.BoundingBox4D___add__(self, *args)
2309 def _get_as_binary(self):
2310 r"""_get_as_binary(BoundingBox4D self) -> PyObject *"""
2311 return _IMP_algebra.BoundingBox4D__get_as_binary(self)
2313 def _set_from_binary(self, p):
2314 r"""_set_from_binary(BoundingBox4D self, PyObject * p)"""
2315 return _IMP_algebra.BoundingBox4D__set_from_binary(self, p)
2317 def __getstate__(self):
2318 p = self._get_as_binary()
2319 if len(self.__dict__) > 1:
2320 d = self.__dict__.copy()
2325 def __setstate__(self, p):
2326 if not hasattr(self,
'this'):
2328 if isinstance(p, tuple):
2330 self.__dict__.update(d)
2331 return self._set_from_binary(p)
2333 __swig_destroy__ = _IMP_algebra.delete_BoundingBox4D
2336 _IMP_algebra.BoundingBox4D_swigregister(BoundingBox4D)
2338 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 5 > class."""
2340 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2342 def get_dimension(self):
2343 r"""get_dimension(BoundingBox5D self) -> unsigned int"""
2344 return _IMP_algebra.BoundingBox5D_get_dimension(self)
2346 def get_corner(self, i):
2347 r"""get_corner(BoundingBox5D self, unsigned int i) -> Vector5D"""
2348 return _IMP_algebra.BoundingBox5D_get_corner(self, i)
2350 def get_corner_0(self):
2351 r"""get_corner_0(BoundingBox5D self) -> Vector5D"""
2352 return _IMP_algebra.BoundingBox5D_get_corner_0(self)
2354 def get_corner_1(self):
2355 r"""get_corner_1(BoundingBox5D self) -> Vector5D"""
2356 return _IMP_algebra.BoundingBox5D_get_corner_1(self)
2358 def get_contains(self, *args):
2360 get_contains(BoundingBox5D self, Vector5D o) -> bool
2361 get_contains(BoundingBox5D self, BoundingBox5D bb) -> bool
2363 return _IMP_algebra.BoundingBox5D_get_contains(self, *args)
2365 def show(self, *args):
2366 r"""show(BoundingBox5D self, _ostream out=std::cout)"""
2367 return _IMP_algebra.BoundingBox5D_show(self, *args)
2370 r"""__str__(BoundingBox5D self) -> std::string"""
2371 return _IMP_algebra.BoundingBox5D___str__(self)
2374 r"""__repr__(BoundingBox5D self) -> std::string"""
2375 return _IMP_algebra.BoundingBox5D___repr__(self)
2377 def __cmp__(self, arg2):
2378 r"""__cmp__(BoundingBox5D self, BoundingBox5D arg2) -> int"""
2379 return _IMP_algebra.BoundingBox5D___cmp__(self, arg2)
2381 def __eq__(self, arg2):
2382 r"""__eq__(BoundingBox5D self, BoundingBox5D arg2) -> bool"""
2383 return _IMP_algebra.BoundingBox5D___eq__(self, arg2)
2385 def __init__(self, *args):
2387 __init__(BoundingBox5D self, unsigned int d) -> BoundingBox5D
2388 __init__(BoundingBox5D self, Vector5D lb, Vector5D ub) -> BoundingBox5D
2389 __init__(BoundingBox5D self, Vector5D v) -> BoundingBox5D
2390 __init__(BoundingBox5D self, IMP::Vector< IMP::algebra::VectorD< 5 > > const & points) -> BoundingBox5D
2391 __init__(BoundingBox5D self) -> BoundingBox5D
2393 _IMP_algebra.BoundingBox5D_swiginit(self, _IMP_algebra.new_BoundingBox5D(*args))
2395 def __getitem__(self, index):
2396 r"""__getitem__(BoundingBox5D self, unsigned int index) -> Vector5D"""
2397 return _IMP_algebra.BoundingBox5D___getitem__(self, index)
2399 def __iadd__(self, *args):
2400 _IMP_algebra.BoundingBox5D___iadd__(self, *args)
2406 r"""__len__(BoundingBox5D self) -> unsigned int"""
2407 return _IMP_algebra.BoundingBox5D___len__(self)
2409 def __add__(self, *args):
2411 __add__(BoundingBox5D self, BoundingBox5D o) -> BoundingBox5D
2412 __add__(BoundingBox5D self, Vector5D o) -> BoundingBox5D
2413 __add__(BoundingBox5D self, double o) -> BoundingBox5D
2415 return _IMP_algebra.BoundingBox5D___add__(self, *args)
2417 def _get_as_binary(self):
2418 r"""_get_as_binary(BoundingBox5D self) -> PyObject *"""
2419 return _IMP_algebra.BoundingBox5D__get_as_binary(self)
2421 def _set_from_binary(self, p):
2422 r"""_set_from_binary(BoundingBox5D self, PyObject * p)"""
2423 return _IMP_algebra.BoundingBox5D__set_from_binary(self, p)
2425 def __getstate__(self):
2426 p = self._get_as_binary()
2427 if len(self.__dict__) > 1:
2428 d = self.__dict__.copy()
2433 def __setstate__(self, p):
2434 if not hasattr(self,
'this'):
2436 if isinstance(p, tuple):
2438 self.__dict__.update(d)
2439 return self._set_from_binary(p)
2441 __swig_destroy__ = _IMP_algebra.delete_BoundingBox5D
2444 _IMP_algebra.BoundingBox5D_swigregister(BoundingBox5D)
2446 r"""Proxy of C++ IMP::algebra::BoundingBoxD< 6 > class."""
2448 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2450 def get_dimension(self):
2451 r"""get_dimension(BoundingBox6D self) -> unsigned int"""
2452 return _IMP_algebra.BoundingBox6D_get_dimension(self)
2454 def get_corner(self, i):
2455 r"""get_corner(BoundingBox6D self, unsigned int i) -> Vector6D"""
2456 return _IMP_algebra.BoundingBox6D_get_corner(self, i)
2458 def get_corner_0(self):
2459 r"""get_corner_0(BoundingBox6D self) -> Vector6D"""
2460 return _IMP_algebra.BoundingBox6D_get_corner_0(self)
2462 def get_corner_1(self):
2463 r"""get_corner_1(BoundingBox6D self) -> Vector6D"""
2464 return _IMP_algebra.BoundingBox6D_get_corner_1(self)
2466 def get_contains(self, *args):
2468 get_contains(BoundingBox6D self, Vector6D o) -> bool
2469 get_contains(BoundingBox6D self, BoundingBox6D bb) -> bool
2471 return _IMP_algebra.BoundingBox6D_get_contains(self, *args)
2473 def show(self, *args):
2474 r"""show(BoundingBox6D self, _ostream out=std::cout)"""
2475 return _IMP_algebra.BoundingBox6D_show(self, *args)
2478 r"""__str__(BoundingBox6D self) -> std::string"""
2479 return _IMP_algebra.BoundingBox6D___str__(self)
2482 r"""__repr__(BoundingBox6D self) -> std::string"""
2483 return _IMP_algebra.BoundingBox6D___repr__(self)
2485 def __cmp__(self, arg2):
2486 r"""__cmp__(BoundingBox6D self, BoundingBox6D arg2) -> int"""
2487 return _IMP_algebra.BoundingBox6D___cmp__(self, arg2)
2489 def __eq__(self, arg2):
2490 r"""__eq__(BoundingBox6D self, BoundingBox6D arg2) -> bool"""
2491 return _IMP_algebra.BoundingBox6D___eq__(self, arg2)
2493 def __init__(self, *args):
2495 __init__(BoundingBox6D self, unsigned int d) -> BoundingBox6D
2496 __init__(BoundingBox6D self, Vector6D lb, Vector6D ub) -> BoundingBox6D
2497 __init__(BoundingBox6D self, Vector6D v) -> BoundingBox6D
2498 __init__(BoundingBox6D self, IMP::Vector< IMP::algebra::VectorD< 6 > > const & points) -> BoundingBox6D
2499 __init__(BoundingBox6D self) -> BoundingBox6D
2501 _IMP_algebra.BoundingBox6D_swiginit(self, _IMP_algebra.new_BoundingBox6D(*args))
2503 def __getitem__(self, index):
2504 r"""__getitem__(BoundingBox6D self, unsigned int index) -> Vector6D"""
2505 return _IMP_algebra.BoundingBox6D___getitem__(self, index)
2507 def __iadd__(self, *args):
2508 _IMP_algebra.BoundingBox6D___iadd__(self, *args)
2514 r"""__len__(BoundingBox6D self) -> unsigned int"""
2515 return _IMP_algebra.BoundingBox6D___len__(self)
2517 def __add__(self, *args):
2519 __add__(BoundingBox6D self, BoundingBox6D o) -> BoundingBox6D
2520 __add__(BoundingBox6D self, Vector6D o) -> BoundingBox6D
2521 __add__(BoundingBox6D self, double o) -> BoundingBox6D
2523 return _IMP_algebra.BoundingBox6D___add__(self, *args)
2525 def _get_as_binary(self):
2526 r"""_get_as_binary(BoundingBox6D self) -> PyObject *"""
2527 return _IMP_algebra.BoundingBox6D__get_as_binary(self)
2529 def _set_from_binary(self, p):
2530 r"""_set_from_binary(BoundingBox6D self, PyObject * p)"""
2531 return _IMP_algebra.BoundingBox6D__set_from_binary(self, p)
2533 def __getstate__(self):
2534 p = self._get_as_binary()
2535 if len(self.__dict__) > 1:
2536 d = self.__dict__.copy()
2541 def __setstate__(self, p):
2542 if not hasattr(self,
'this'):
2544 if isinstance(p, tuple):
2546 self.__dict__.update(d)
2547 return self._set_from_binary(p)
2549 __swig_destroy__ = _IMP_algebra.delete_BoundingBox6D
2552 _IMP_algebra.BoundingBox6D_swigregister(BoundingBox6D)
2554 r"""Proxy of C++ IMP::algebra::BoundingBoxD< -1 > class."""
2556 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2558 def get_dimension(self):
2559 r"""get_dimension(BoundingBoxKD self) -> unsigned int"""
2560 return _IMP_algebra.BoundingBoxKD_get_dimension(self)
2562 def get_corner(self, i):
2563 r"""get_corner(BoundingBoxKD self, unsigned int i) -> VectorKD"""
2564 return _IMP_algebra.BoundingBoxKD_get_corner(self, i)
2566 def get_corner_0(self):
2567 r"""get_corner_0(BoundingBoxKD self) -> VectorKD"""
2568 return _IMP_algebra.BoundingBoxKD_get_corner_0(self)
2570 def get_corner_1(self):
2571 r"""get_corner_1(BoundingBoxKD self) -> VectorKD"""
2572 return _IMP_algebra.BoundingBoxKD_get_corner_1(self)
2574 def get_contains(self, *args):
2576 get_contains(BoundingBoxKD self, VectorKD o) -> bool
2577 get_contains(BoundingBoxKD self, BoundingBoxKD bb) -> bool
2579 return _IMP_algebra.BoundingBoxKD_get_contains(self, *args)
2581 def show(self, *args):
2582 r"""show(BoundingBoxKD self, _ostream out=std::cout)"""
2583 return _IMP_algebra.BoundingBoxKD_show(self, *args)
2586 r"""__str__(BoundingBoxKD self) -> std::string"""
2587 return _IMP_algebra.BoundingBoxKD___str__(self)
2590 r"""__repr__(BoundingBoxKD self) -> std::string"""
2591 return _IMP_algebra.BoundingBoxKD___repr__(self)
2593 def __cmp__(self, arg2):
2594 r"""__cmp__(BoundingBoxKD self, BoundingBoxKD arg2) -> int"""
2595 return _IMP_algebra.BoundingBoxKD___cmp__(self, arg2)
2597 def __eq__(self, arg2):
2598 r"""__eq__(BoundingBoxKD self, BoundingBoxKD arg2) -> bool"""
2599 return _IMP_algebra.BoundingBoxKD___eq__(self, arg2)
2601 def __init__(self, *args):
2603 __init__(BoundingBoxKD self, unsigned int d) -> BoundingBoxKD
2604 __init__(BoundingBoxKD self, VectorKD lb, VectorKD ub) -> BoundingBoxKD
2605 __init__(BoundingBoxKD self, VectorKD v) -> BoundingBoxKD
2606 __init__(BoundingBoxKD self, IMP::Vector< IMP::algebra::VectorD< -1 > > const & points) -> BoundingBoxKD
2607 __init__(BoundingBoxKD self) -> BoundingBoxKD
2609 _IMP_algebra.BoundingBoxKD_swiginit(self, _IMP_algebra.new_BoundingBoxKD(*args))
2611 def __getitem__(self, index):
2612 r"""__getitem__(BoundingBoxKD self, unsigned int index) -> VectorKD"""
2613 return _IMP_algebra.BoundingBoxKD___getitem__(self, index)
2615 def __iadd__(self, *args):
2616 _IMP_algebra.BoundingBoxKD___iadd__(self, *args)
2622 r"""__len__(BoundingBoxKD self) -> unsigned int"""
2623 return _IMP_algebra.BoundingBoxKD___len__(self)
2625 def __add__(self, *args):
2627 __add__(BoundingBoxKD self, BoundingBoxKD o) -> BoundingBoxKD
2628 __add__(BoundingBoxKD self, VectorKD o) -> BoundingBoxKD
2629 __add__(BoundingBoxKD self, double o) -> BoundingBoxKD
2631 return _IMP_algebra.BoundingBoxKD___add__(self, *args)
2633 def _get_as_binary(self):
2634 r"""_get_as_binary(BoundingBoxKD self) -> PyObject *"""
2635 return _IMP_algebra.BoundingBoxKD__get_as_binary(self)
2637 def _set_from_binary(self, p):
2638 r"""_set_from_binary(BoundingBoxKD self, PyObject * p)"""
2639 return _IMP_algebra.BoundingBoxKD__set_from_binary(self, p)
2641 def __getstate__(self):
2642 p = self._get_as_binary()
2643 if len(self.__dict__) > 1:
2644 d = self.__dict__.copy()
2649 def __setstate__(self, p):
2650 if not hasattr(self,
'this'):
2652 if isinstance(p, tuple):
2654 self.__dict__.update(d)
2655 return self._set_from_binary(p)
2657 __swig_destroy__ = _IMP_algebra.delete_BoundingBoxKD
2660 _IMP_algebra.BoundingBoxKD_swigregister(BoundingBoxKD)
2661 class Sphere1D(IMP._GeometricPrimitive1D):
2662 r"""Proxy of C++ IMP::algebra::SphereD< 1 > class."""
2664 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2666 def __init__(self, *args):
2668 __init__(Sphere1D self) -> Sphere1D
2669 __init__(Sphere1D self, Vector1D center, double radius) -> Sphere1D
2671 _IMP_algebra.Sphere1D_swiginit(self, _IMP_algebra.new_Sphere1D(*args))
2673 def get_radius(self):
2674 r"""get_radius(Sphere1D self) -> double"""
2675 return _IMP_algebra.Sphere1D_get_radius(self)
2677 def get_center(self):
2678 r"""get_center(Sphere1D self) -> Vector1D"""
2679 return _IMP_algebra.Sphere1D_get_center(self)
2681 def get_contains(self, *args):
2683 get_contains(Sphere1D self, Sphere1D o) -> bool
2684 get_contains(Sphere1D self, Vector1D p) -> bool
2686 return _IMP_algebra.Sphere1D_get_contains(self, *args)
2688 def show(self, *args):
2689 r"""show(Sphere1D self, _ostream out=std::cout)"""
2690 return _IMP_algebra.Sphere1D_show(self, *args)
2692 def get_dimension(self):
2693 r"""get_dimension(Sphere1D self) -> unsigned int"""
2694 return _IMP_algebra.Sphere1D_get_dimension(self)
2697 r"""__str__(Sphere1D self) -> std::string"""
2698 return _IMP_algebra.Sphere1D___str__(self)
2701 r"""__repr__(Sphere1D self) -> std::string"""
2702 return _IMP_algebra.Sphere1D___repr__(self)
2704 def __cmp__(self, arg2):
2705 r"""__cmp__(Sphere1D self, Sphere1D arg2) -> int"""
2706 return _IMP_algebra.Sphere1D___cmp__(self, arg2)
2708 def __eq__(self, arg2):
2709 r"""__eq__(Sphere1D self, Sphere1D arg2) -> bool"""
2710 return _IMP_algebra.Sphere1D___eq__(self, arg2)
2712 def _get_as_binary(self):
2713 r"""_get_as_binary(Sphere1D self) -> PyObject *"""
2714 return _IMP_algebra.Sphere1D__get_as_binary(self)
2716 def _set_from_binary(self, p):
2717 r"""_set_from_binary(Sphere1D self, PyObject * p)"""
2718 return _IMP_algebra.Sphere1D__set_from_binary(self, p)
2720 def __getstate__(self):
2721 p = self._get_as_binary()
2722 if len(self.__dict__) > 1:
2723 d = self.__dict__.copy()
2728 def __setstate__(self, p):
2729 if not hasattr(self,
'this'):
2731 if isinstance(p, tuple):
2733 self.__dict__.update(d)
2734 return self._set_from_binary(p)
2736 __swig_destroy__ = _IMP_algebra.delete_Sphere1D
2739 _IMP_algebra.Sphere1D_swigregister(Sphere1D)
2740 class Sphere2D(IMP._GeometricPrimitive2D):
2741 r"""Proxy of C++ IMP::algebra::SphereD< 2 > class."""
2743 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2745 def __init__(self, *args):
2747 __init__(Sphere2D self) -> Sphere2D
2748 __init__(Sphere2D self, Vector2D center, double radius) -> Sphere2D
2750 _IMP_algebra.Sphere2D_swiginit(self, _IMP_algebra.new_Sphere2D(*args))
2752 def get_radius(self):
2753 r"""get_radius(Sphere2D self) -> double"""
2754 return _IMP_algebra.Sphere2D_get_radius(self)
2756 def get_center(self):
2757 r"""get_center(Sphere2D self) -> Vector2D"""
2758 return _IMP_algebra.Sphere2D_get_center(self)
2760 def get_contains(self, *args):
2762 get_contains(Sphere2D self, Sphere2D o) -> bool
2763 get_contains(Sphere2D self, Vector2D p) -> bool
2765 return _IMP_algebra.Sphere2D_get_contains(self, *args)
2767 def show(self, *args):
2768 r"""show(Sphere2D self, _ostream out=std::cout)"""
2769 return _IMP_algebra.Sphere2D_show(self, *args)
2771 def get_dimension(self):
2772 r"""get_dimension(Sphere2D self) -> unsigned int"""
2773 return _IMP_algebra.Sphere2D_get_dimension(self)
2776 r"""__str__(Sphere2D self) -> std::string"""
2777 return _IMP_algebra.Sphere2D___str__(self)
2780 r"""__repr__(Sphere2D self) -> std::string"""
2781 return _IMP_algebra.Sphere2D___repr__(self)
2783 def __cmp__(self, arg2):
2784 r"""__cmp__(Sphere2D self, Sphere2D arg2) -> int"""
2785 return _IMP_algebra.Sphere2D___cmp__(self, arg2)
2787 def __eq__(self, arg2):
2788 r"""__eq__(Sphere2D self, Sphere2D arg2) -> bool"""
2789 return _IMP_algebra.Sphere2D___eq__(self, arg2)
2791 def _get_as_binary(self):
2792 r"""_get_as_binary(Sphere2D self) -> PyObject *"""
2793 return _IMP_algebra.Sphere2D__get_as_binary(self)
2795 def _set_from_binary(self, p):
2796 r"""_set_from_binary(Sphere2D self, PyObject * p)"""
2797 return _IMP_algebra.Sphere2D__set_from_binary(self, p)
2799 def __getstate__(self):
2800 p = self._get_as_binary()
2801 if len(self.__dict__) > 1:
2802 d = self.__dict__.copy()
2807 def __setstate__(self, p):
2808 if not hasattr(self,
'this'):
2810 if isinstance(p, tuple):
2812 self.__dict__.update(d)
2813 return self._set_from_binary(p)
2815 __swig_destroy__ = _IMP_algebra.delete_Sphere2D
2818 _IMP_algebra.Sphere2D_swigregister(Sphere2D)
2819 class Sphere3D(IMP._GeometricPrimitive3D):
2820 r"""Proxy of C++ IMP::algebra::SphereD< 3 > class."""
2822 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2824 def __init__(self, *args):
2826 __init__(Sphere3D self) -> Sphere3D
2827 __init__(Sphere3D self, Vector3D center, double radius) -> Sphere3D
2829 _IMP_algebra.Sphere3D_swiginit(self, _IMP_algebra.new_Sphere3D(*args))
2831 def get_radius(self):
2832 r"""get_radius(Sphere3D self) -> double"""
2833 return _IMP_algebra.Sphere3D_get_radius(self)
2835 def get_center(self):
2836 r"""get_center(Sphere3D self) -> Vector3D"""
2837 return _IMP_algebra.Sphere3D_get_center(self)
2839 def get_contains(self, *args):
2841 get_contains(Sphere3D self, Sphere3D o) -> bool
2842 get_contains(Sphere3D self, Vector3D p) -> bool
2844 return _IMP_algebra.Sphere3D_get_contains(self, *args)
2846 def show(self, *args):
2847 r"""show(Sphere3D self, _ostream out=std::cout)"""
2848 return _IMP_algebra.Sphere3D_show(self, *args)
2850 def get_dimension(self):
2851 r"""get_dimension(Sphere3D self) -> unsigned int"""
2852 return _IMP_algebra.Sphere3D_get_dimension(self)
2855 r"""__str__(Sphere3D self) -> std::string"""
2856 return _IMP_algebra.Sphere3D___str__(self)
2859 r"""__repr__(Sphere3D self) -> std::string"""
2860 return _IMP_algebra.Sphere3D___repr__(self)
2862 def __cmp__(self, arg2):
2863 r"""__cmp__(Sphere3D self, Sphere3D arg2) -> int"""
2864 return _IMP_algebra.Sphere3D___cmp__(self, arg2)
2866 def __eq__(self, arg2):
2867 r"""__eq__(Sphere3D self, Sphere3D arg2) -> bool"""
2868 return _IMP_algebra.Sphere3D___eq__(self, arg2)
2870 def _get_as_binary(self):
2871 r"""_get_as_binary(Sphere3D self) -> PyObject *"""
2872 return _IMP_algebra.Sphere3D__get_as_binary(self)
2874 def _set_from_binary(self, p):
2875 r"""_set_from_binary(Sphere3D self, PyObject * p)"""
2876 return _IMP_algebra.Sphere3D__set_from_binary(self, p)
2878 def __getstate__(self):
2879 p = self._get_as_binary()
2880 if len(self.__dict__) > 1:
2881 d = self.__dict__.copy()
2886 def __setstate__(self, p):
2887 if not hasattr(self,
'this'):
2889 if isinstance(p, tuple):
2891 self.__dict__.update(d)
2892 return self._set_from_binary(p)
2894 __swig_destroy__ = _IMP_algebra.delete_Sphere3D
2897 _IMP_algebra.Sphere3D_swigregister(Sphere3D)
2898 class Sphere4D(IMP._GeometricPrimitive4D):
2899 r"""Proxy of C++ IMP::algebra::SphereD< 4 > class."""
2901 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2903 def __init__(self, *args):
2905 __init__(Sphere4D self) -> Sphere4D
2906 __init__(Sphere4D self, Vector4D center, double radius) -> Sphere4D
2908 _IMP_algebra.Sphere4D_swiginit(self, _IMP_algebra.new_Sphere4D(*args))
2910 def get_radius(self):
2911 r"""get_radius(Sphere4D self) -> double"""
2912 return _IMP_algebra.Sphere4D_get_radius(self)
2914 def get_center(self):
2915 r"""get_center(Sphere4D self) -> Vector4D"""
2916 return _IMP_algebra.Sphere4D_get_center(self)
2918 def get_contains(self, *args):
2920 get_contains(Sphere4D self, Sphere4D o) -> bool
2921 get_contains(Sphere4D self, Vector4D p) -> bool
2923 return _IMP_algebra.Sphere4D_get_contains(self, *args)
2925 def show(self, *args):
2926 r"""show(Sphere4D self, _ostream out=std::cout)"""
2927 return _IMP_algebra.Sphere4D_show(self, *args)
2929 def get_dimension(self):
2930 r"""get_dimension(Sphere4D self) -> unsigned int"""
2931 return _IMP_algebra.Sphere4D_get_dimension(self)
2934 r"""__str__(Sphere4D self) -> std::string"""
2935 return _IMP_algebra.Sphere4D___str__(self)
2938 r"""__repr__(Sphere4D self) -> std::string"""
2939 return _IMP_algebra.Sphere4D___repr__(self)
2941 def __cmp__(self, arg2):
2942 r"""__cmp__(Sphere4D self, Sphere4D arg2) -> int"""
2943 return _IMP_algebra.Sphere4D___cmp__(self, arg2)
2945 def __eq__(self, arg2):
2946 r"""__eq__(Sphere4D self, Sphere4D arg2) -> bool"""
2947 return _IMP_algebra.Sphere4D___eq__(self, arg2)
2949 def _get_as_binary(self):
2950 r"""_get_as_binary(Sphere4D self) -> PyObject *"""
2951 return _IMP_algebra.Sphere4D__get_as_binary(self)
2953 def _set_from_binary(self, p):
2954 r"""_set_from_binary(Sphere4D self, PyObject * p)"""
2955 return _IMP_algebra.Sphere4D__set_from_binary(self, p)
2957 def __getstate__(self):
2958 p = self._get_as_binary()
2959 if len(self.__dict__) > 1:
2960 d = self.__dict__.copy()
2965 def __setstate__(self, p):
2966 if not hasattr(self,
'this'):
2968 if isinstance(p, tuple):
2970 self.__dict__.update(d)
2971 return self._set_from_binary(p)
2973 __swig_destroy__ = _IMP_algebra.delete_Sphere4D
2976 _IMP_algebra.Sphere4D_swigregister(Sphere4D)
2977 class Sphere5D(IMP._GeometricPrimitive5D):
2978 r"""Proxy of C++ IMP::algebra::SphereD< 5 > class."""
2980 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
2982 def __init__(self, *args):
2984 __init__(Sphere5D self) -> Sphere5D
2985 __init__(Sphere5D self, Vector5D center, double radius) -> Sphere5D
2987 _IMP_algebra.Sphere5D_swiginit(self, _IMP_algebra.new_Sphere5D(*args))
2989 def get_radius(self):
2990 r"""get_radius(Sphere5D self) -> double"""
2991 return _IMP_algebra.Sphere5D_get_radius(self)
2993 def get_center(self):
2994 r"""get_center(Sphere5D self) -> Vector5D"""
2995 return _IMP_algebra.Sphere5D_get_center(self)
2997 def get_contains(self, *args):
2999 get_contains(Sphere5D self, Sphere5D o) -> bool
3000 get_contains(Sphere5D self, Vector5D p) -> bool
3002 return _IMP_algebra.Sphere5D_get_contains(self, *args)
3004 def show(self, *args):
3005 r"""show(Sphere5D self, _ostream out=std::cout)"""
3006 return _IMP_algebra.Sphere5D_show(self, *args)
3008 def get_dimension(self):
3009 r"""get_dimension(Sphere5D self) -> unsigned int"""
3010 return _IMP_algebra.Sphere5D_get_dimension(self)
3013 r"""__str__(Sphere5D self) -> std::string"""
3014 return _IMP_algebra.Sphere5D___str__(self)
3017 r"""__repr__(Sphere5D self) -> std::string"""
3018 return _IMP_algebra.Sphere5D___repr__(self)
3020 def __cmp__(self, arg2):
3021 r"""__cmp__(Sphere5D self, Sphere5D arg2) -> int"""
3022 return _IMP_algebra.Sphere5D___cmp__(self, arg2)
3024 def __eq__(self, arg2):
3025 r"""__eq__(Sphere5D self, Sphere5D arg2) -> bool"""
3026 return _IMP_algebra.Sphere5D___eq__(self, arg2)
3028 def _get_as_binary(self):
3029 r"""_get_as_binary(Sphere5D self) -> PyObject *"""
3030 return _IMP_algebra.Sphere5D__get_as_binary(self)
3032 def _set_from_binary(self, p):
3033 r"""_set_from_binary(Sphere5D self, PyObject * p)"""
3034 return _IMP_algebra.Sphere5D__set_from_binary(self, p)
3036 def __getstate__(self):
3037 p = self._get_as_binary()
3038 if len(self.__dict__) > 1:
3039 d = self.__dict__.copy()
3044 def __setstate__(self, p):
3045 if not hasattr(self,
'this'):
3047 if isinstance(p, tuple):
3049 self.__dict__.update(d)
3050 return self._set_from_binary(p)
3052 __swig_destroy__ = _IMP_algebra.delete_Sphere5D
3055 _IMP_algebra.Sphere5D_swigregister(Sphere5D)
3056 class Sphere6D(IMP._GeometricPrimitive6D):
3057 r"""Proxy of C++ IMP::algebra::SphereD< 6 > class."""
3059 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3061 def __init__(self, *args):
3063 __init__(Sphere6D self) -> Sphere6D
3064 __init__(Sphere6D self, Vector6D center, double radius) -> Sphere6D
3066 _IMP_algebra.Sphere6D_swiginit(self, _IMP_algebra.new_Sphere6D(*args))
3068 def get_radius(self):
3069 r"""get_radius(Sphere6D self) -> double"""
3070 return _IMP_algebra.Sphere6D_get_radius(self)
3072 def get_center(self):
3073 r"""get_center(Sphere6D self) -> Vector6D"""
3074 return _IMP_algebra.Sphere6D_get_center(self)
3076 def get_contains(self, *args):
3078 get_contains(Sphere6D self, Sphere6D o) -> bool
3079 get_contains(Sphere6D self, Vector6D p) -> bool
3081 return _IMP_algebra.Sphere6D_get_contains(self, *args)
3083 def show(self, *args):
3084 r"""show(Sphere6D self, _ostream out=std::cout)"""
3085 return _IMP_algebra.Sphere6D_show(self, *args)
3087 def get_dimension(self):
3088 r"""get_dimension(Sphere6D self) -> unsigned int"""
3089 return _IMP_algebra.Sphere6D_get_dimension(self)
3092 r"""__str__(Sphere6D self) -> std::string"""
3093 return _IMP_algebra.Sphere6D___str__(self)
3096 r"""__repr__(Sphere6D self) -> std::string"""
3097 return _IMP_algebra.Sphere6D___repr__(self)
3099 def __cmp__(self, arg2):
3100 r"""__cmp__(Sphere6D self, Sphere6D arg2) -> int"""
3101 return _IMP_algebra.Sphere6D___cmp__(self, arg2)
3103 def __eq__(self, arg2):
3104 r"""__eq__(Sphere6D self, Sphere6D arg2) -> bool"""
3105 return _IMP_algebra.Sphere6D___eq__(self, arg2)
3107 def _get_as_binary(self):
3108 r"""_get_as_binary(Sphere6D self) -> PyObject *"""
3109 return _IMP_algebra.Sphere6D__get_as_binary(self)
3111 def _set_from_binary(self, p):
3112 r"""_set_from_binary(Sphere6D self, PyObject * p)"""
3113 return _IMP_algebra.Sphere6D__set_from_binary(self, p)
3115 def __getstate__(self):
3116 p = self._get_as_binary()
3117 if len(self.__dict__) > 1:
3118 d = self.__dict__.copy()
3123 def __setstate__(self, p):
3124 if not hasattr(self,
'this'):
3126 if isinstance(p, tuple):
3128 self.__dict__.update(d)
3129 return self._set_from_binary(p)
3131 __swig_destroy__ = _IMP_algebra.delete_Sphere6D
3134 _IMP_algebra.Sphere6D_swigregister(Sphere6D)
3135 class SphereKD(IMP._GeometricPrimitiveKD):
3136 r"""Proxy of C++ IMP::algebra::SphereD< -1 > class."""
3138 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3140 def __init__(self, *args):
3142 __init__(SphereKD self) -> SphereKD
3143 __init__(SphereKD self, VectorKD center, double radius) -> SphereKD
3145 _IMP_algebra.SphereKD_swiginit(self, _IMP_algebra.new_SphereKD(*args))
3147 def get_radius(self):
3148 r"""get_radius(SphereKD self) -> double"""
3149 return _IMP_algebra.SphereKD_get_radius(self)
3151 def get_center(self):
3152 r"""get_center(SphereKD self) -> VectorKD"""
3153 return _IMP_algebra.SphereKD_get_center(self)
3155 def get_contains(self, *args):
3157 get_contains(SphereKD self, SphereKD o) -> bool
3158 get_contains(SphereKD self, VectorKD p) -> bool
3160 return _IMP_algebra.SphereKD_get_contains(self, *args)
3162 def show(self, *args):
3163 r"""show(SphereKD self, _ostream out=std::cout)"""
3164 return _IMP_algebra.SphereKD_show(self, *args)
3166 def get_dimension(self):
3167 r"""get_dimension(SphereKD self) -> unsigned int"""
3168 return _IMP_algebra.SphereKD_get_dimension(self)
3171 r"""__str__(SphereKD self) -> std::string"""
3172 return _IMP_algebra.SphereKD___str__(self)
3175 r"""__repr__(SphereKD self) -> std::string"""
3176 return _IMP_algebra.SphereKD___repr__(self)
3178 def __cmp__(self, arg2):
3179 r"""__cmp__(SphereKD self, SphereKD arg2) -> int"""
3180 return _IMP_algebra.SphereKD___cmp__(self, arg2)
3182 def __eq__(self, arg2):
3183 r"""__eq__(SphereKD self, SphereKD arg2) -> bool"""
3184 return _IMP_algebra.SphereKD___eq__(self, arg2)
3186 def _get_as_binary(self):
3187 r"""_get_as_binary(SphereKD self) -> PyObject *"""
3188 return _IMP_algebra.SphereKD__get_as_binary(self)
3190 def _set_from_binary(self, p):
3191 r"""_set_from_binary(SphereKD self, PyObject * p)"""
3192 return _IMP_algebra.SphereKD__set_from_binary(self, p)
3194 def __getstate__(self):
3195 p = self._get_as_binary()
3196 if len(self.__dict__) > 1:
3197 d = self.__dict__.copy()
3202 def __setstate__(self, p):
3203 if not hasattr(self,
'this'):
3205 if isinstance(p, tuple):
3207 self.__dict__.update(d)
3208 return self._set_from_binary(p)
3210 __swig_destroy__ = _IMP_algebra.delete_SphereKD
3213 _IMP_algebra.SphereKD_swigregister(SphereKD)
3214 class UnitSimplex1D(_UnitSimplexBase1D):
3215 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 1 > class."""
3217 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3220 r"""__init__(UnitSimplex1D self) -> UnitSimplex1D"""
3221 _IMP_algebra.UnitSimplex1D_swiginit(self, _IMP_algebra.new_UnitSimplex1D())
3223 def show(self, *args):
3224 r"""show(UnitSimplex1D self, _ostream out=std::cout)"""
3225 return _IMP_algebra.UnitSimplex1D_show(self, *args)
3228 r"""__str__(UnitSimplex1D self) -> std::string"""
3229 return _IMP_algebra.UnitSimplex1D___str__(self)
3232 r"""__repr__(UnitSimplex1D self) -> std::string"""
3233 return _IMP_algebra.UnitSimplex1D___repr__(self)
3235 def __cmp__(self, arg2):
3236 r"""__cmp__(UnitSimplex1D self, UnitSimplex1D arg2) -> int"""
3237 return _IMP_algebra.UnitSimplex1D___cmp__(self, arg2)
3239 def __eq__(self, arg2):
3240 r"""__eq__(UnitSimplex1D self, UnitSimplex1D arg2) -> bool"""
3241 return _IMP_algebra.UnitSimplex1D___eq__(self, arg2)
3243 def _get_as_binary(self):
3244 r"""_get_as_binary(UnitSimplex1D self) -> PyObject *"""
3245 return _IMP_algebra.UnitSimplex1D__get_as_binary(self)
3247 def _set_from_binary(self, p):
3248 r"""_set_from_binary(UnitSimplex1D self, PyObject * p)"""
3249 return _IMP_algebra.UnitSimplex1D__set_from_binary(self, p)
3251 def __getstate__(self):
3252 p = self._get_as_binary()
3253 if len(self.__dict__) > 1:
3254 d = self.__dict__.copy()
3259 def __setstate__(self, p):
3260 if not hasattr(self,
'this'):
3262 if isinstance(p, tuple):
3264 self.__dict__.update(d)
3265 return self._set_from_binary(p)
3267 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex1D
3270 _IMP_algebra.UnitSimplex1D_swigregister(UnitSimplex1D)
3271 class UnitSimplex2D(_UnitSimplexBase2D):
3272 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 2 > class."""
3274 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3277 r"""__init__(UnitSimplex2D self) -> UnitSimplex2D"""
3278 _IMP_algebra.UnitSimplex2D_swiginit(self, _IMP_algebra.new_UnitSimplex2D())
3280 def show(self, *args):
3281 r"""show(UnitSimplex2D self, _ostream out=std::cout)"""
3282 return _IMP_algebra.UnitSimplex2D_show(self, *args)
3285 r"""__str__(UnitSimplex2D self) -> std::string"""
3286 return _IMP_algebra.UnitSimplex2D___str__(self)
3289 r"""__repr__(UnitSimplex2D self) -> std::string"""
3290 return _IMP_algebra.UnitSimplex2D___repr__(self)
3292 def __cmp__(self, arg2):
3293 r"""__cmp__(UnitSimplex2D self, UnitSimplex2D arg2) -> int"""
3294 return _IMP_algebra.UnitSimplex2D___cmp__(self, arg2)
3296 def __eq__(self, arg2):
3297 r"""__eq__(UnitSimplex2D self, UnitSimplex2D arg2) -> bool"""
3298 return _IMP_algebra.UnitSimplex2D___eq__(self, arg2)
3300 def _get_as_binary(self):
3301 r"""_get_as_binary(UnitSimplex2D self) -> PyObject *"""
3302 return _IMP_algebra.UnitSimplex2D__get_as_binary(self)
3304 def _set_from_binary(self, p):
3305 r"""_set_from_binary(UnitSimplex2D self, PyObject * p)"""
3306 return _IMP_algebra.UnitSimplex2D__set_from_binary(self, p)
3308 def __getstate__(self):
3309 p = self._get_as_binary()
3310 if len(self.__dict__) > 1:
3311 d = self.__dict__.copy()
3316 def __setstate__(self, p):
3317 if not hasattr(self,
'this'):
3319 if isinstance(p, tuple):
3321 self.__dict__.update(d)
3322 return self._set_from_binary(p)
3324 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex2D
3327 _IMP_algebra.UnitSimplex2D_swigregister(UnitSimplex2D)
3328 class UnitSimplex3D(_UnitSimplexBase3D):
3329 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 3 > class."""
3331 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3334 r"""__init__(UnitSimplex3D self) -> UnitSimplex3D"""
3335 _IMP_algebra.UnitSimplex3D_swiginit(self, _IMP_algebra.new_UnitSimplex3D())
3337 def show(self, *args):
3338 r"""show(UnitSimplex3D self, _ostream out=std::cout)"""
3339 return _IMP_algebra.UnitSimplex3D_show(self, *args)
3342 r"""__str__(UnitSimplex3D self) -> std::string"""
3343 return _IMP_algebra.UnitSimplex3D___str__(self)
3346 r"""__repr__(UnitSimplex3D self) -> std::string"""
3347 return _IMP_algebra.UnitSimplex3D___repr__(self)
3349 def __cmp__(self, arg2):
3350 r"""__cmp__(UnitSimplex3D self, UnitSimplex3D arg2) -> int"""
3351 return _IMP_algebra.UnitSimplex3D___cmp__(self, arg2)
3353 def __eq__(self, arg2):
3354 r"""__eq__(UnitSimplex3D self, UnitSimplex3D arg2) -> bool"""
3355 return _IMP_algebra.UnitSimplex3D___eq__(self, arg2)
3357 def _get_as_binary(self):
3358 r"""_get_as_binary(UnitSimplex3D self) -> PyObject *"""
3359 return _IMP_algebra.UnitSimplex3D__get_as_binary(self)
3361 def _set_from_binary(self, p):
3362 r"""_set_from_binary(UnitSimplex3D self, PyObject * p)"""
3363 return _IMP_algebra.UnitSimplex3D__set_from_binary(self, p)
3365 def __getstate__(self):
3366 p = self._get_as_binary()
3367 if len(self.__dict__) > 1:
3368 d = self.__dict__.copy()
3373 def __setstate__(self, p):
3374 if not hasattr(self,
'this'):
3376 if isinstance(p, tuple):
3378 self.__dict__.update(d)
3379 return self._set_from_binary(p)
3381 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex3D
3384 _IMP_algebra.UnitSimplex3D_swigregister(UnitSimplex3D)
3385 class UnitSimplex4D(_UnitSimplexBase4D):
3386 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 4 > class."""
3388 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3391 r"""__init__(UnitSimplex4D self) -> UnitSimplex4D"""
3392 _IMP_algebra.UnitSimplex4D_swiginit(self, _IMP_algebra.new_UnitSimplex4D())
3394 def show(self, *args):
3395 r"""show(UnitSimplex4D self, _ostream out=std::cout)"""
3396 return _IMP_algebra.UnitSimplex4D_show(self, *args)
3399 r"""__str__(UnitSimplex4D self) -> std::string"""
3400 return _IMP_algebra.UnitSimplex4D___str__(self)
3403 r"""__repr__(UnitSimplex4D self) -> std::string"""
3404 return _IMP_algebra.UnitSimplex4D___repr__(self)
3406 def __cmp__(self, arg2):
3407 r"""__cmp__(UnitSimplex4D self, UnitSimplex4D arg2) -> int"""
3408 return _IMP_algebra.UnitSimplex4D___cmp__(self, arg2)
3410 def __eq__(self, arg2):
3411 r"""__eq__(UnitSimplex4D self, UnitSimplex4D arg2) -> bool"""
3412 return _IMP_algebra.UnitSimplex4D___eq__(self, arg2)
3414 def _get_as_binary(self):
3415 r"""_get_as_binary(UnitSimplex4D self) -> PyObject *"""
3416 return _IMP_algebra.UnitSimplex4D__get_as_binary(self)
3418 def _set_from_binary(self, p):
3419 r"""_set_from_binary(UnitSimplex4D self, PyObject * p)"""
3420 return _IMP_algebra.UnitSimplex4D__set_from_binary(self, p)
3422 def __getstate__(self):
3423 p = self._get_as_binary()
3424 if len(self.__dict__) > 1:
3425 d = self.__dict__.copy()
3430 def __setstate__(self, p):
3431 if not hasattr(self,
'this'):
3433 if isinstance(p, tuple):
3435 self.__dict__.update(d)
3436 return self._set_from_binary(p)
3438 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex4D
3441 _IMP_algebra.UnitSimplex4D_swigregister(UnitSimplex4D)
3442 class UnitSimplex5D(_UnitSimplexBase5D):
3443 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 5 > class."""
3445 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3448 r"""__init__(UnitSimplex5D self) -> UnitSimplex5D"""
3449 _IMP_algebra.UnitSimplex5D_swiginit(self, _IMP_algebra.new_UnitSimplex5D())
3451 def show(self, *args):
3452 r"""show(UnitSimplex5D self, _ostream out=std::cout)"""
3453 return _IMP_algebra.UnitSimplex5D_show(self, *args)
3456 r"""__str__(UnitSimplex5D self) -> std::string"""
3457 return _IMP_algebra.UnitSimplex5D___str__(self)
3460 r"""__repr__(UnitSimplex5D self) -> std::string"""
3461 return _IMP_algebra.UnitSimplex5D___repr__(self)
3463 def __cmp__(self, arg2):
3464 r"""__cmp__(UnitSimplex5D self, UnitSimplex5D arg2) -> int"""
3465 return _IMP_algebra.UnitSimplex5D___cmp__(self, arg2)
3467 def __eq__(self, arg2):
3468 r"""__eq__(UnitSimplex5D self, UnitSimplex5D arg2) -> bool"""
3469 return _IMP_algebra.UnitSimplex5D___eq__(self, arg2)
3471 def _get_as_binary(self):
3472 r"""_get_as_binary(UnitSimplex5D self) -> PyObject *"""
3473 return _IMP_algebra.UnitSimplex5D__get_as_binary(self)
3475 def _set_from_binary(self, p):
3476 r"""_set_from_binary(UnitSimplex5D self, PyObject * p)"""
3477 return _IMP_algebra.UnitSimplex5D__set_from_binary(self, p)
3479 def __getstate__(self):
3480 p = self._get_as_binary()
3481 if len(self.__dict__) > 1:
3482 d = self.__dict__.copy()
3487 def __setstate__(self, p):
3488 if not hasattr(self,
'this'):
3490 if isinstance(p, tuple):
3492 self.__dict__.update(d)
3493 return self._set_from_binary(p)
3495 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex5D
3498 _IMP_algebra.UnitSimplex5D_swigregister(UnitSimplex5D)
3499 class UnitSimplex6D(_UnitSimplexBase6D):
3500 r"""Proxy of C++ IMP::algebra::UnitSimplexD< 6 > class."""
3502 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3505 r"""__init__(UnitSimplex6D self) -> UnitSimplex6D"""
3506 _IMP_algebra.UnitSimplex6D_swiginit(self, _IMP_algebra.new_UnitSimplex6D())
3508 def show(self, *args):
3509 r"""show(UnitSimplex6D self, _ostream out=std::cout)"""
3510 return _IMP_algebra.UnitSimplex6D_show(self, *args)
3513 r"""__str__(UnitSimplex6D self) -> std::string"""
3514 return _IMP_algebra.UnitSimplex6D___str__(self)
3517 r"""__repr__(UnitSimplex6D self) -> std::string"""
3518 return _IMP_algebra.UnitSimplex6D___repr__(self)
3520 def __cmp__(self, arg2):
3521 r"""__cmp__(UnitSimplex6D self, UnitSimplex6D arg2) -> int"""
3522 return _IMP_algebra.UnitSimplex6D___cmp__(self, arg2)
3524 def __eq__(self, arg2):
3525 r"""__eq__(UnitSimplex6D self, UnitSimplex6D arg2) -> bool"""
3526 return _IMP_algebra.UnitSimplex6D___eq__(self, arg2)
3528 def _get_as_binary(self):
3529 r"""_get_as_binary(UnitSimplex6D self) -> PyObject *"""
3530 return _IMP_algebra.UnitSimplex6D__get_as_binary(self)
3532 def _set_from_binary(self, p):
3533 r"""_set_from_binary(UnitSimplex6D self, PyObject * p)"""
3534 return _IMP_algebra.UnitSimplex6D__set_from_binary(self, p)
3536 def __getstate__(self):
3537 p = self._get_as_binary()
3538 if len(self.__dict__) > 1:
3539 d = self.__dict__.copy()
3544 def __setstate__(self, p):
3545 if not hasattr(self,
'this'):
3547 if isinstance(p, tuple):
3549 self.__dict__.update(d)
3550 return self._set_from_binary(p)
3552 __swig_destroy__ = _IMP_algebra.delete_UnitSimplex6D
3555 _IMP_algebra.UnitSimplex6D_swigregister(UnitSimplex6D)
3556 class UnitSimplexKD(_UnitSimplexBaseKD):
3557 r"""Proxy of C++ IMP::algebra::UnitSimplexD< -1 > class."""
3559 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3560 __repr__ = _swig_repr
3562 def __init__(self, d=1):
3563 r"""__init__(UnitSimplexKD self, int d=1) -> UnitSimplexKD"""
3564 _IMP_algebra.UnitSimplexKD_swiginit(self, _IMP_algebra.new_UnitSimplexKD(d))
3566 def show(self, *args):
3567 r"""show(UnitSimplexKD self, _ostream out=std::cout)"""
3568 return _IMP_algebra.UnitSimplexKD_show(self, *args)
3570 def _get_as_binary(self):
3571 r"""_get_as_binary(UnitSimplexKD self) -> PyObject *"""
3572 return _IMP_algebra.UnitSimplexKD__get_as_binary(self)
3574 def _set_from_binary(self, p):
3575 r"""_set_from_binary(UnitSimplexKD self, PyObject * p)"""
3576 return _IMP_algebra.UnitSimplexKD__set_from_binary(self, p)
3578 def __getstate__(self):
3579 p = self._get_as_binary()
3580 if len(self.__dict__) > 1:
3581 d = self.__dict__.copy()
3586 def __setstate__(self, p):
3587 if not hasattr(self,
'this'):
3589 if isinstance(p, tuple):
3591 self.__dict__.update(d)
3592 return self._set_from_binary(p)
3594 __swig_destroy__ = _IMP_algebra.delete_UnitSimplexKD
3597 _IMP_algebra.UnitSimplexKD_swigregister(UnitSimplexKD)
3598 class ReferenceFrame3D(object):
3599 r"""Proxy of C++ IMP::algebra::ReferenceFrame3D class."""
3601 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3603 def __init__(self, *args):
3605 __init__(ReferenceFrame3D self, ReferenceFrame3D arg2) -> ReferenceFrame3D
3606 __init__(ReferenceFrame3D self) -> ReferenceFrame3D
3607 __init__(ReferenceFrame3D self, Transformation3D tr) -> ReferenceFrame3D
3609 _IMP_algebra.ReferenceFrame3D_swiginit(self, _IMP_algebra.new_ReferenceFrame3D(*args))
3610 __swig_destroy__ = _IMP_algebra.delete_ReferenceFrame3D
3612 def get_transformation_to(self):
3613 r"""get_transformation_to(ReferenceFrame3D self) -> Transformation3D"""
3614 return _IMP_algebra.ReferenceFrame3D_get_transformation_to(self)
3616 def get_transformation_from(self):
3617 r"""get_transformation_from(ReferenceFrame3D self) -> Transformation3D"""
3618 return _IMP_algebra.ReferenceFrame3D_get_transformation_from(self)
3620 def get_global_coordinates(self, v):
3621 r"""get_global_coordinates(ReferenceFrame3D self, Vector3D v) -> Vector3D"""
3622 return _IMP_algebra.ReferenceFrame3D_get_global_coordinates(self, v)
3624 def get_local_coordinates(self, v):
3625 r"""get_local_coordinates(ReferenceFrame3D self, Vector3D v) -> Vector3D"""
3626 return _IMP_algebra.ReferenceFrame3D_get_local_coordinates(self, v)
3628 def get_global_reference_frame(self, v):
3629 r"""get_global_reference_frame(ReferenceFrame3D self, ReferenceFrame3D v) -> ReferenceFrame3D"""
3630 return _IMP_algebra.ReferenceFrame3D_get_global_reference_frame(self, v)
3632 def get_local_reference_frame(self, v):
3633 r"""get_local_reference_frame(ReferenceFrame3D self, ReferenceFrame3D v) -> ReferenceFrame3D"""
3634 return _IMP_algebra.ReferenceFrame3D_get_local_reference_frame(self, v)
3636 def show(self, *args):
3637 r"""show(ReferenceFrame3D self, _ostream out=std::cout)"""
3638 return _IMP_algebra.ReferenceFrame3D_show(self, *args)
3641 r"""__str__(ReferenceFrame3D self) -> std::string"""
3642 return _IMP_algebra.ReferenceFrame3D___str__(self)
3645 r"""__repr__(ReferenceFrame3D self) -> std::string"""
3646 return _IMP_algebra.ReferenceFrame3D___repr__(self)
3648 def _get_as_binary(self):
3649 r"""_get_as_binary(ReferenceFrame3D self) -> PyObject *"""
3650 return _IMP_algebra.ReferenceFrame3D__get_as_binary(self)
3652 def _set_from_binary(self, p):
3653 r"""_set_from_binary(ReferenceFrame3D self, PyObject * p)"""
3654 return _IMP_algebra.ReferenceFrame3D__set_from_binary(self, p)
3656 def __getstate__(self):
3657 p = self._get_as_binary()
3658 if len(self.__dict__) > 1:
3659 d = self.__dict__.copy()
3664 def __setstate__(self, p):
3665 if not hasattr(self,
'this'):
3667 if isinstance(p, tuple):
3669 self.__dict__.update(d)
3670 return self._set_from_binary(p)
3674 _IMP_algebra.ReferenceFrame3D_swigregister(ReferenceFrame3D)
3676 def get_transformed(*args):
3678 get_transformed(BoundingBox3D bb, Transformation3D tr) -> BoundingBox3D
3679 get_transformed(Line3D l, Transformation3D tr) -> Line3D
3680 get_transformed(ReferenceFrame3D rf, Transformation3D tr) -> ReferenceFrame3D
3682 return _IMP_algebra.get_transformed(*args)
3684 def get_transformation_from_first_to_second(a, b):
3685 r"""get_transformation_from_first_to_second(ReferenceFrame3D a, ReferenceFrame3D b) -> Transformation3D"""
3686 return _IMP_algebra.get_transformation_from_first_to_second(a, b)
3687 class SphericalVector3D(IMP._GeometricPrimitive3D):
3688 r"""Proxy of C++ IMP::algebra::SphericalVector3D class."""
3690 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3692 def __init__(self, *args):
3694 __init__(SphericalVector3D self) -> SphericalVector3D
3695 __init__(SphericalVector3D self, Vector3D v) -> SphericalVector3D
3696 __init__(SphericalVector3D self, double r, double theta, double psi, bool apply_check=True) -> SphericalVector3D
3698 _IMP_algebra.SphericalVector3D_swiginit(self, _IMP_algebra.new_SphericalVector3D(*args))
3700 def get_cartesian_coordinates(self):
3701 r"""get_cartesian_coordinates(SphericalVector3D self) -> Vector3D"""
3702 return _IMP_algebra.SphericalVector3D_get_cartesian_coordinates(self)
3704 def show(self, *args):
3705 r"""show(SphericalVector3D self, _ostream out=std::cout)"""
3706 return _IMP_algebra.SphericalVector3D_show(self, *args)
3709 r"""__str__(SphericalVector3D self) -> std::string"""
3710 return _IMP_algebra.SphericalVector3D___str__(self)
3713 r"""__repr__(SphericalVector3D self) -> std::string"""
3714 return _IMP_algebra.SphericalVector3D___repr__(self)
3716 def _get_as_binary(self):
3717 r"""_get_as_binary(SphericalVector3D self) -> PyObject *"""
3718 return _IMP_algebra.SphericalVector3D__get_as_binary(self)
3720 def _set_from_binary(self, p):
3721 r"""_set_from_binary(SphericalVector3D self, PyObject * p)"""
3722 return _IMP_algebra.SphericalVector3D__set_from_binary(self, p)
3724 def __getstate__(self):
3725 p = self._get_as_binary()
3726 if len(self.__dict__) > 1:
3727 d = self.__dict__.copy()
3732 def __setstate__(self, p):
3733 if not hasattr(self,
'this'):
3735 if isinstance(p, tuple):
3737 self.__dict__.update(d)
3738 return self._set_from_binary(p)
3741 def __getitem__(self, index):
3742 r"""__getitem__(SphericalVector3D self, unsigned int index) -> double"""
3743 return _IMP_algebra.SphericalVector3D___getitem__(self, index)
3745 def __setitem__(self, index, val):
3746 r"""__setitem__(SphericalVector3D self, unsigned int index, double val)"""
3747 return _IMP_algebra.SphericalVector3D___setitem__(self, index, val)
3748 __swig_destroy__ = _IMP_algebra.delete_SphericalVector3D
3751 _IMP_algebra.SphericalVector3D_swigregister(SphericalVector3D)
3754 r"""get_alignments_from_first_to_second(PrincipalComponentAnalysis3D pca1, PrincipalComponentAnalysis3D pca2) -> IMP::algebra::Transformation3Ds"""
3755 return _IMP_algebra.get_alignments_from_first_to_second(pca1, pca2)
3756 class Line3D(IMP._GeometricPrimitive3D):
3757 r"""Proxy of C++ IMP::algebra::Line3D class."""
3759 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3761 def __init__(self, *args):
3763 __init__(Line3D self) -> Line3D
3764 __init__(Line3D self, Vector3D direction, Vector3D point_on_line) -> Line3D
3765 __init__(Line3D self, Segment3D s) -> Line3D
3767 _IMP_algebra.Line3D_swiginit(self, _IMP_algebra.new_Line3D(*args))
3769 def get_direction(self):
3770 r"""get_direction(Line3D self) -> Vector3D"""
3771 return _IMP_algebra.Line3D_get_direction(self)
3773 def get_point_on_line(self):
3774 r"""get_point_on_line(Line3D self) -> Vector3D"""
3775 return _IMP_algebra.Line3D_get_point_on_line(self)
3777 def get_moment(self, *args):
3779 get_moment(Line3D self) -> Vector3D
3780 get_moment(Line3D self, Vector3D v) -> Vector3D
3782 return _IMP_algebra.Line3D_get_moment(self, *args)
3784 def get_reciprocal_product(self, l):
3785 r"""get_reciprocal_product(Line3D self, Line3D l) -> double"""
3786 return _IMP_algebra.Line3D_get_reciprocal_product(self, l)
3788 def get_opposite(self):
3789 r"""get_opposite(Line3D self) -> Line3D"""
3790 return _IMP_algebra.Line3D_get_opposite(self)
3792 def get_segment_starting_at(self, v, d):
3793 r"""get_segment_starting_at(Line3D self, Vector3D v, double d) -> Segment3D"""
3794 return _IMP_algebra.Line3D_get_segment_starting_at(self, v, d)
3796 def show(self, *args):
3797 r"""show(Line3D self, _ostream out=std::cout)"""
3798 return _IMP_algebra.Line3D_show(self, *args)
3801 r"""__str__(Line3D self) -> std::string"""
3802 return _IMP_algebra.Line3D___str__(self)
3805 r"""__repr__(Line3D self) -> std::string"""
3806 return _IMP_algebra.Line3D___repr__(self)
3808 def _get_as_binary(self):
3809 r"""_get_as_binary(Line3D self) -> PyObject *"""
3810 return _IMP_algebra.Line3D__get_as_binary(self)
3812 def _set_from_binary(self, p):
3813 r"""_set_from_binary(Line3D self, PyObject * p)"""
3814 return _IMP_algebra.Line3D__set_from_binary(self, p)
3816 def __getstate__(self):
3817 p = self._get_as_binary()
3818 if len(self.__dict__) > 1:
3819 d = self.__dict__.copy()
3824 def __setstate__(self, p):
3825 if not hasattr(self,
'this'):
3827 if isinstance(p, tuple):
3829 self.__dict__.update(d)
3830 return self._set_from_binary(p)
3832 __swig_destroy__ = _IMP_algebra.delete_Line3D
3835 _IMP_algebra.Line3D_swigregister(Line3D)
3837 def get_line_3d_geometry(g):
3838 r"""get_line_3d_geometry(Line3D g) -> Line3D"""
3839 return _IMP_algebra.get_line_3d_geometry(g)
3842 r"""get_angle(Line3D a, Line3D b) -> double"""
3843 return _IMP_algebra.get_angle(a, b)
3846 r"""get_segment_connecting_first_to_second(Line3D a, Line3D b) -> Segment3D"""
3847 return _IMP_algebra.get_segment_connecting_first_to_second(a, b)
3848 class Segment3D(IMP._GeometricPrimitive3D):
3849 r"""Proxy of C++ IMP::algebra::Segment3D class."""
3851 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3853 def __init__(self, *args):
3855 __init__(Segment3D self) -> Segment3D
3856 __init__(Segment3D self, Vector3D start, Vector3D end) -> Segment3D
3858 _IMP_algebra.Segment3D_swiginit(self, _IMP_algebra.new_Segment3D(*args))
3860 def get_point(self, i):
3863 return _IMP_algebra.Segment3D_get_point(self, i)
3867 def get_middle_point(self):
3868 r"""get_middle_point(Segment3D self) -> Vector3D"""
3869 return _IMP_algebra.Segment3D_get_middle_point(self)
3871 def get_direction(self):
3872 r"""get_direction(Segment3D self) -> Vector3D"""
3873 return _IMP_algebra.Segment3D_get_direction(self)
3875 def get_length(self):
3876 r"""get_length(Segment3D self) -> double"""
3877 return _IMP_algebra.Segment3D_get_length(self)
3879 def show(self, *args):
3880 r"""show(Segment3D self, _ostream out=std::cout)"""
3881 return _IMP_algebra.Segment3D_show(self, *args)
3884 r"""__str__(Segment3D self) -> std::string"""
3885 return _IMP_algebra.Segment3D___str__(self)
3888 r"""__repr__(Segment3D self) -> std::string"""
3889 return _IMP_algebra.Segment3D___repr__(self)
3891 def _get_as_binary(self):
3892 r"""_get_as_binary(Segment3D self) -> PyObject *"""
3893 return _IMP_algebra.Segment3D__get_as_binary(self)
3895 def _set_from_binary(self, p):
3896 r"""_set_from_binary(Segment3D self, PyObject * p)"""
3897 return _IMP_algebra.Segment3D__set_from_binary(self, p)
3899 def __getstate__(self):
3900 p = self._get_as_binary()
3901 if len(self.__dict__) > 1:
3902 d = self.__dict__.copy()
3907 def __setstate__(self, p):
3908 if not hasattr(self,
'this'):
3910 if isinstance(p, tuple):
3912 self.__dict__.update(d)
3913 return self._set_from_binary(p)
3915 __swig_destroy__ = _IMP_algebra.delete_Segment3D
3918 _IMP_algebra.Segment3D_swigregister(Segment3D)
3920 def get_segment_3d_geometry(g):
3921 r"""get_segment_3d_geometry(Segment3D g) -> Segment3D"""
3922 return _IMP_algebra.get_segment_3d_geometry(g)
3925 r"""get_relative_projection_on_segment(Segment3D s, Vector3D p) -> double"""
3926 return _IMP_algebra.get_relative_projection_on_segment(s, p)
3927 class Triangle3D(IMP._GeometricPrimitive3D):
3928 r"""Proxy of C++ IMP::algebra::Triangle3D class."""
3930 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
3932 def __init__(self, *args):
3934 __init__(Triangle3D self) -> Triangle3D
3935 __init__(Triangle3D self, Vector3D p1, Vector3D p2, Vector3D p3) -> Triangle3D
3937 _IMP_algebra.Triangle3D_swiginit(self, _IMP_algebra.new_Triangle3D(*args))
3939 def get_point(self, i):
3940 r"""get_point(Triangle3D self, unsigned int i) -> Vector3D"""
3941 return _IMP_algebra.Triangle3D_get_point(self, i)
3943 def show(self, *args):
3944 r"""show(Triangle3D self, _ostream out=std::cout)"""
3945 return _IMP_algebra.Triangle3D_show(self, *args)
3947 def get_edge_lengths(self):
3948 r"""get_edge_lengths(Triangle3D self) -> IMP::Floats"""
3949 return _IMP_algebra.Triangle3D_get_edge_lengths(self)
3952 r"""__str__(Triangle3D self) -> std::string"""
3953 return _IMP_algebra.Triangle3D___str__(self)
3956 r"""__repr__(Triangle3D self) -> std::string"""
3957 return _IMP_algebra.Triangle3D___repr__(self)
3959 def _get_as_binary(self):
3960 r"""_get_as_binary(Triangle3D self) -> PyObject *"""
3961 return _IMP_algebra.Triangle3D__get_as_binary(self)
3963 def _set_from_binary(self, p):
3964 r"""_set_from_binary(Triangle3D self, PyObject * p)"""
3965 return _IMP_algebra.Triangle3D__set_from_binary(self, p)
3967 def __getstate__(self):
3968 p = self._get_as_binary()
3969 if len(self.__dict__) > 1:
3970 d = self.__dict__.copy()
3975 def __setstate__(self, p):
3976 if not hasattr(self,
'this'):
3978 if isinstance(p, tuple):
3980 self.__dict__.update(d)
3981 return self._set_from_binary(p)
3983 __swig_destroy__ = _IMP_algebra.delete_Triangle3D
3986 _IMP_algebra.Triangle3D_swigregister(Triangle3D)
3989 r"""get_largest_triangle(IMP::algebra::Vector3Ds const & points) -> Triangle3D"""
3990 return _IMP_algebra.get_largest_triangle(points)
3993 r"""get_transformation_from_first_triangle_to_second(Triangle3D first_tri, Triangle3D second_tri) -> Transformation3D"""
3994 return _IMP_algebra.get_transformation_from_first_triangle_to_second(first_tri, second_tri)
3997 r"""get_are_colinear(Vector3D p1, Vector3D p2, Vector3D p3) -> bool"""
3998 return _IMP_algebra.get_are_colinear(p1, p2, p3)
3999 class LinearFit2D(IMP._GeometricPrimitive2D):
4000 r"""Proxy of C++ IMP::algebra::LinearFit2D class."""
4002 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4004 def __init__(self, *args):
4006 __init__(LinearFit2D self) -> LinearFit2D
4007 __init__(LinearFit2D self, IMP::algebra::Vector2Ds const & data, IMP::Floats const & error_bars=IMP::Floats()) -> LinearFit2D
4009 _IMP_algebra.LinearFit2D_swiginit(self, _IMP_algebra.new_LinearFit2D(*args))
4011 def get_fit_error(self):
4012 r"""get_fit_error(LinearFit2D self) -> double"""
4013 return _IMP_algebra.LinearFit2D_get_fit_error(self)
4016 r"""get_a(LinearFit2D self) -> double"""
4017 return _IMP_algebra.LinearFit2D_get_a(self)
4020 r"""get_b(LinearFit2D self) -> double"""
4021 return _IMP_algebra.LinearFit2D_get_b(self)
4023 def show(self, *args):
4024 r"""show(LinearFit2D self, _ostream out=std::cout)"""
4025 return _IMP_algebra.LinearFit2D_show(self, *args)
4028 r"""__str__(LinearFit2D self) -> std::string"""
4029 return _IMP_algebra.LinearFit2D___str__(self)
4032 r"""__repr__(LinearFit2D self) -> std::string"""
4033 return _IMP_algebra.LinearFit2D___repr__(self)
4035 def _get_as_binary(self):
4036 r"""_get_as_binary(LinearFit2D self) -> PyObject *"""
4037 return _IMP_algebra.LinearFit2D__get_as_binary(self)
4039 def _set_from_binary(self, p):
4040 r"""_set_from_binary(LinearFit2D self, PyObject * p)"""
4041 return _IMP_algebra.LinearFit2D__set_from_binary(self, p)
4043 def __getstate__(self):
4044 p = self._get_as_binary()
4045 if len(self.__dict__) > 1:
4046 d = self.__dict__.copy()
4051 def __setstate__(self, p):
4052 if not hasattr(self,
'this'):
4054 if isinstance(p, tuple):
4056 self.__dict__.update(d)
4057 return self._set_from_binary(p)
4059 __swig_destroy__ = _IMP_algebra.delete_LinearFit2D
4062 _IMP_algebra.LinearFit2D_swigregister(LinearFit2D)
4063 class ParabolicFit2D(IMP._GeometricPrimitive2D):
4064 r"""Proxy of C++ IMP::algebra::ParabolicFit2D class."""
4066 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4068 def __init__(self, *args):
4070 __init__(ParabolicFit2D self) -> ParabolicFit2D
4071 __init__(ParabolicFit2D self, IMP::algebra::Vector2Ds const & data) -> ParabolicFit2D
4073 _IMP_algebra.ParabolicFit2D_swiginit(self, _IMP_algebra.new_ParabolicFit2D(*args))
4075 def get_fit_error(self):
4076 r"""get_fit_error(ParabolicFit2D self) -> double"""
4077 return _IMP_algebra.ParabolicFit2D_get_fit_error(self)
4080 r"""get_a(ParabolicFit2D self) -> double"""
4081 return _IMP_algebra.ParabolicFit2D_get_a(self)
4084 r"""get_b(ParabolicFit2D self) -> double"""
4085 return _IMP_algebra.ParabolicFit2D_get_b(self)
4088 r"""get_c(ParabolicFit2D self) -> double"""
4089 return _IMP_algebra.ParabolicFit2D_get_c(self)
4091 def show(self, *args):
4092 r"""show(ParabolicFit2D self, _ostream out=std::cout)"""
4093 return _IMP_algebra.ParabolicFit2D_show(self, *args)
4096 r"""__str__(ParabolicFit2D self) -> std::string"""
4097 return _IMP_algebra.ParabolicFit2D___str__(self)
4100 r"""__repr__(ParabolicFit2D self) -> std::string"""
4101 return _IMP_algebra.ParabolicFit2D___repr__(self)
4103 def _get_as_binary(self):
4104 r"""_get_as_binary(ParabolicFit2D self) -> PyObject *"""
4105 return _IMP_algebra.ParabolicFit2D__get_as_binary(self)
4107 def _set_from_binary(self, p):
4108 r"""_set_from_binary(ParabolicFit2D self, PyObject * p)"""
4109 return _IMP_algebra.ParabolicFit2D__set_from_binary(self, p)
4111 def __getstate__(self):
4112 p = self._get_as_binary()
4113 if len(self.__dict__) > 1:
4114 d = self.__dict__.copy()
4119 def __setstate__(self, p):
4120 if not hasattr(self,
'this'):
4122 if isinstance(p, tuple):
4124 self.__dict__.update(d)
4125 return self._set_from_binary(p)
4127 __swig_destroy__ = _IMP_algebra.delete_ParabolicFit2D
4130 _IMP_algebra.ParabolicFit2D_swigregister(ParabolicFit2D)
4131 class Plane3D(IMP._GeometricPrimitive3D):
4132 r"""Proxy of C++ IMP::algebra::Plane3D class."""
4134 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4136 def __init__(self, *args):
4138 __init__(Plane3D self) -> Plane3D
4139 __init__(Plane3D self, Vector3D point_on_plane, Vector3D normal_to_plane) -> Plane3D
4140 __init__(Plane3D self, double distance_to_plane, Vector3D normal_to_plane) -> Plane3D
4142 _IMP_algebra.Plane3D_swiginit(self, _IMP_algebra.new_Plane3D(*args))
4144 def get_point_on_plane(self):
4145 r"""get_point_on_plane(Plane3D self) -> Vector3D"""
4146 return _IMP_algebra.Plane3D_get_point_on_plane(self)
4148 def get_normal(self):
4149 r"""get_normal(Plane3D self) -> Vector3D"""
4150 return _IMP_algebra.Plane3D_get_normal(self)
4153 r"""get_projected(Plane3D self, Vector3D p) -> Vector3D"""
4154 return _IMP_algebra.Plane3D_get_projected(self, p)
4156 def get_is_above(self, p):
4157 r"""get_is_above(Plane3D self, Vector3D p) -> bool"""
4158 return _IMP_algebra.Plane3D_get_is_above(self, p)
4160 def get_is_below(self, p):
4161 r"""get_is_below(Plane3D self, Vector3D p) -> bool"""
4162 return _IMP_algebra.Plane3D_get_is_below(self, p)
4165 r"""get_height(Plane3D self, Vector3D p) -> double"""
4166 return _IMP_algebra.Plane3D_get_height(self, p)
4168 def show(self, *args):
4169 r"""show(Plane3D self, _ostream out=std::cout)"""
4170 return _IMP_algebra.Plane3D_show(self, *args)
4172 def get_opposite(self):
4173 r"""get_opposite(Plane3D self) -> Plane3D"""
4174 return _IMP_algebra.Plane3D_get_opposite(self)
4176 def get_distance_from_origin(self):
4177 r"""get_distance_from_origin(Plane3D self) -> double"""
4178 return _IMP_algebra.Plane3D_get_distance_from_origin(self)
4181 r"""__str__(Plane3D self) -> std::string"""
4182 return _IMP_algebra.Plane3D___str__(self)
4185 r"""__repr__(Plane3D self) -> std::string"""
4186 return _IMP_algebra.Plane3D___repr__(self)
4188 def _get_as_binary(self):
4189 r"""_get_as_binary(Plane3D self) -> PyObject *"""
4190 return _IMP_algebra.Plane3D__get_as_binary(self)
4192 def _set_from_binary(self, p):
4193 r"""_set_from_binary(Plane3D self, PyObject * p)"""
4194 return _IMP_algebra.Plane3D__set_from_binary(self, p)
4196 def __getstate__(self):
4197 p = self._get_as_binary()
4198 if len(self.__dict__) > 1:
4199 d = self.__dict__.copy()
4204 def __setstate__(self, p):
4205 if not hasattr(self,
'this'):
4207 if isinstance(p, tuple):
4209 self.__dict__.update(d)
4210 return self._set_from_binary(p)
4212 __swig_destroy__ = _IMP_algebra.delete_Plane3D
4215 _IMP_algebra.Plane3D_swigregister(Plane3D)
4218 r"""get_reflected(Plane3D pln, Vector3D p) -> Vector3D"""
4219 return _IMP_algebra.get_reflected(pln, p)
4221 def get_plane_3d_geometry(g):
4222 r"""get_plane_3d_geometry(Plane3D g) -> Plane3D"""
4223 return _IMP_algebra.get_plane_3d_geometry(g)
4224 class Reflection3D(IMP._GeometricPrimitive3D):
4225 r"""Proxy of C++ IMP::algebra::Reflection3D class."""
4227 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4229 def __init__(self, *args):
4231 __init__(Reflection3D self) -> Reflection3D
4232 __init__(Reflection3D self, Plane3D pl) -> Reflection3D
4234 _IMP_algebra.Reflection3D_swiginit(self, _IMP_algebra.new_Reflection3D(*args))
4237 r"""get_reflected(Reflection3D self, Vector3D v) -> Vector3D"""
4238 return _IMP_algebra.Reflection3D_get_reflected(self, v)
4240 def show(self, *args):
4241 r"""show(Reflection3D self, _ostream out=std::cout)"""
4242 return _IMP_algebra.Reflection3D_show(self, *args)
4245 r"""__str__(Reflection3D self) -> std::string"""
4246 return _IMP_algebra.Reflection3D___str__(self)
4249 r"""__repr__(Reflection3D self) -> std::string"""
4250 return _IMP_algebra.Reflection3D___repr__(self)
4252 def _get_as_binary(self):
4253 r"""_get_as_binary(Reflection3D self) -> PyObject *"""
4254 return _IMP_algebra.Reflection3D__get_as_binary(self)
4256 def _set_from_binary(self, p):
4257 r"""_set_from_binary(Reflection3D self, PyObject * p)"""
4258 return _IMP_algebra.Reflection3D__set_from_binary(self, p)
4260 def __getstate__(self):
4261 p = self._get_as_binary()
4262 if len(self.__dict__) > 1:
4263 d = self.__dict__.copy()
4268 def __setstate__(self, p):
4269 if not hasattr(self,
'this'):
4271 if isinstance(p, tuple):
4273 self.__dict__.update(d)
4274 return self._set_from_binary(p)
4276 __swig_destroy__ = _IMP_algebra.delete_Reflection3D
4279 _IMP_algebra.Reflection3D_swigregister(Reflection3D)
4280 class Cylinder3D(IMP._GeometricPrimitive3D):
4281 r"""Proxy of C++ IMP::algebra::Cylinder3D class."""
4283 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4285 def __init__(self, *args):
4287 __init__(Cylinder3D self) -> Cylinder3D
4288 __init__(Cylinder3D self, Segment3D s, double radius) -> Cylinder3D
4290 _IMP_algebra.Cylinder3D_swiginit(self, _IMP_algebra.new_Cylinder3D(*args))
4292 def get_radius(self):
4293 r"""get_radius(Cylinder3D self) -> double"""
4294 return _IMP_algebra.Cylinder3D_get_radius(self)
4297 r"""get_segment(Cylinder3D self) -> Segment3D"""
4298 return _IMP_algebra.Cylinder3D_get_segment(self)
4300 def get_surface_point_at(self, relative_height, angle):
4301 r"""get_surface_point_at(Cylinder3D self, double relative_height, double angle) -> Vector3D"""
4302 return _IMP_algebra.Cylinder3D_get_surface_point_at(self, relative_height, angle)
4304 def get_inner_point_at(self, relative_height, relative_radius, angle):
4305 r"""get_inner_point_at(Cylinder3D self, double relative_height, double relative_radius, double angle) -> Vector3D"""
4306 return _IMP_algebra.Cylinder3D_get_inner_point_at(self, relative_height, relative_radius, angle)
4308 def show(self, *args):
4309 r"""show(Cylinder3D self, _ostream out=std::cout)"""
4310 return _IMP_algebra.Cylinder3D_show(self, *args)
4313 r"""__str__(Cylinder3D self) -> std::string"""
4314 return _IMP_algebra.Cylinder3D___str__(self)
4317 r"""__repr__(Cylinder3D self) -> std::string"""
4318 return _IMP_algebra.Cylinder3D___repr__(self)
4320 def _get_as_binary(self):
4321 r"""_get_as_binary(Cylinder3D self) -> PyObject *"""
4322 return _IMP_algebra.Cylinder3D__get_as_binary(self)
4324 def _set_from_binary(self, p):
4325 r"""_set_from_binary(Cylinder3D self, PyObject * p)"""
4326 return _IMP_algebra.Cylinder3D__set_from_binary(self, p)
4328 def __getstate__(self):
4329 p = self._get_as_binary()
4330 if len(self.__dict__) > 1:
4331 d = self.__dict__.copy()
4336 def __setstate__(self, p):
4337 if not hasattr(self,
'this'):
4339 if isinstance(p, tuple):
4341 self.__dict__.update(d)
4342 return self._set_from_binary(p)
4344 __swig_destroy__ = _IMP_algebra.delete_Cylinder3D
4347 _IMP_algebra.Cylinder3D_swigregister(Cylinder3D)
4349 def get_cylinder_3d_geometry(g):
4350 r"""get_cylinder_3d_geometry(Cylinder3D g) -> Cylinder3D"""
4351 return _IMP_algebra.get_cylinder_3d_geometry(g)
4352 class Ellipsoid3D(IMP._GeometricPrimitive3D):
4353 r"""Proxy of C++ IMP::algebra::Ellipsoid3D class."""
4355 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4357 def __init__(self, *args):
4359 __init__(Ellipsoid3D self) -> Ellipsoid3D
4360 __init__(Ellipsoid3D self, ReferenceFrame3D rf, Vector3D radii) -> Ellipsoid3D
4361 __init__(Ellipsoid3D self, Vector3D center, double radius_x, double radius_y, double radius_z, Rotation3D rot) -> Ellipsoid3D
4363 _IMP_algebra.Ellipsoid3D_swiginit(self, _IMP_algebra.new_Ellipsoid3D(*args))
4365 def get_radii(self):
4366 r"""get_radii(Ellipsoid3D self) -> Vector3D"""
4367 return _IMP_algebra.Ellipsoid3D_get_radii(self)
4369 def get_reference_frame(self):
4370 r"""get_reference_frame(Ellipsoid3D self) -> ReferenceFrame3D"""
4371 return _IMP_algebra.Ellipsoid3D_get_reference_frame(self)
4373 def show(self, *args):
4374 r"""show(Ellipsoid3D self, _ostream out=std::cout)"""
4375 return _IMP_algebra.Ellipsoid3D_show(self, *args)
4378 r"""__str__(Ellipsoid3D self) -> std::string"""
4379 return _IMP_algebra.Ellipsoid3D___str__(self)
4382 r"""__repr__(Ellipsoid3D self) -> std::string"""
4383 return _IMP_algebra.Ellipsoid3D___repr__(self)
4385 def _get_as_binary(self):
4386 r"""_get_as_binary(Ellipsoid3D self) -> PyObject *"""
4387 return _IMP_algebra.Ellipsoid3D__get_as_binary(self)
4389 def _set_from_binary(self, p):
4390 r"""_set_from_binary(Ellipsoid3D self, PyObject * p)"""
4391 return _IMP_algebra.Ellipsoid3D__set_from_binary(self, p)
4393 def __getstate__(self):
4394 p = self._get_as_binary()
4395 if len(self.__dict__) > 1:
4396 d = self.__dict__.copy()
4401 def __setstate__(self, p):
4402 if not hasattr(self,
'this'):
4404 if isinstance(p, tuple):
4406 self.__dict__.update(d)
4407 return self._set_from_binary(p)
4409 __swig_destroy__ = _IMP_algebra.delete_Ellipsoid3D
4412 _IMP_algebra.Ellipsoid3D_swigregister(Ellipsoid3D)
4414 def get_ellipsoid_3d_geometry(g):
4415 r"""get_ellipsoid_3d_geometry(Ellipsoid3D g) -> Ellipsoid3D"""
4416 return _IMP_algebra.get_ellipsoid_3d_geometry(g)
4417 class ConnollySurfacePoint(object):
4418 r"""Proxy of C++ IMP::algebra::ConnollySurfacePoint class."""
4420 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4422 def __init__(self, *args):
4424 __init__(ConnollySurfacePoint self) -> ConnollySurfacePoint
4425 __init__(ConnollySurfacePoint self, int a0, int a1, int a2, Vector3D sp, float a, Vector3D n) -> ConnollySurfacePoint
4427 _IMP_algebra.ConnollySurfacePoint_swiginit(self, _IMP_algebra.new_ConnollySurfacePoint(*args))
4430 r"""get_atom(ConnollySurfacePoint self, unsigned int i) -> int"""
4431 return _IMP_algebra.ConnollySurfacePoint_get_atom(self, i)
4433 def get_surface_point(self):
4434 r"""get_surface_point(ConnollySurfacePoint self) -> Vector3D"""
4435 return _IMP_algebra.ConnollySurfacePoint_get_surface_point(self)
4438 r"""get_area(ConnollySurfacePoint self) -> double"""
4439 return _IMP_algebra.ConnollySurfacePoint_get_area(self)
4441 def get_normal(self):
4442 r"""get_normal(ConnollySurfacePoint self) -> Vector3D"""
4443 return _IMP_algebra.ConnollySurfacePoint_get_normal(self)
4445 def show(self, *args):
4446 r"""show(ConnollySurfacePoint self, _ostream out=std::cout)"""
4447 return _IMP_algebra.ConnollySurfacePoint_show(self, *args)
4450 r"""__str__(ConnollySurfacePoint self) -> std::string"""
4451 return _IMP_algebra.ConnollySurfacePoint___str__(self)
4454 r"""__repr__(ConnollySurfacePoint self) -> std::string"""
4455 return _IMP_algebra.ConnollySurfacePoint___repr__(self)
4457 def _get_as_binary(self):
4458 r"""_get_as_binary(ConnollySurfacePoint self) -> PyObject *"""
4459 return _IMP_algebra.ConnollySurfacePoint__get_as_binary(self)
4461 def _set_from_binary(self, p):
4462 r"""_set_from_binary(ConnollySurfacePoint self, PyObject * p)"""
4463 return _IMP_algebra.ConnollySurfacePoint__set_from_binary(self, p)
4465 def __getstate__(self):
4466 p = self._get_as_binary()
4467 if len(self.__dict__) > 1:
4468 d = self.__dict__.copy()
4473 def __setstate__(self, p):
4474 if not hasattr(self,
'this'):
4476 if isinstance(p, tuple):
4478 self.__dict__.update(d)
4479 return self._set_from_binary(p)
4481 __swig_destroy__ = _IMP_algebra.delete_ConnollySurfacePoint
4484 _IMP_algebra.ConnollySurfacePoint_swigregister(ConnollySurfacePoint)
4487 r"""get_connolly_surface(IMP::algebra::Sphere3Ds const & spheres, double density, double probe_radius) -> IMP::algebra::ConnollySurfacePoints"""
4488 return _IMP_algebra.get_connolly_surface(spheres, density, probe_radius)
4489 class LogEmbedding3D(object):
4490 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 3 > class."""
4492 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4494 def __init__(self, *args):
4496 __init__(LogEmbedding3D self, Vector3D origin, Vector3D cell, Vector3D base) -> LogEmbedding3D
4497 __init__(LogEmbedding3D self, BoundingBox3D bb, Vector3D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding3D
4498 __init__(LogEmbedding3D self, Vector3D arg2, Vector3D arg3) -> LogEmbedding3D
4499 __init__(LogEmbedding3D self) -> LogEmbedding3D
4501 _IMP_algebra.LogEmbedding3D_swiginit(self, _IMP_algebra.new_LogEmbedding3D(*args))
4503 def set_origin(self, o):
4504 r"""set_origin(LogEmbedding3D self, Vector3D o)"""
4505 return _IMP_algebra.LogEmbedding3D_set_origin(self, o)
4507 def get_origin(self):
4508 r"""get_origin(LogEmbedding3D self) -> Vector3D"""
4509 return _IMP_algebra.LogEmbedding3D_get_origin(self)
4511 def get_dimension(self):
4512 r"""get_dimension(LogEmbedding3D self) -> unsigned int"""
4513 return _IMP_algebra.LogEmbedding3D_get_dimension(self)
4515 def set_unit_cell(self, *args):
4517 set_unit_cell(LogEmbedding3D self, Vector3D o, Vector3D base)
4518 set_unit_cell(LogEmbedding3D self, Vector3D o)
4520 return _IMP_algebra.LogEmbedding3D_set_unit_cell(self, *args)
4522 def get_unit_cell(self):
4523 r"""get_unit_cell(LogEmbedding3D self) -> Vector3D"""
4524 return _IMP_algebra.LogEmbedding3D_get_unit_cell(self)
4526 def get_extended_index(self, o):
4527 r"""get_extended_index(LogEmbedding3D self, Vector3D o) -> ExtendedGridIndex3D"""
4528 return _IMP_algebra.LogEmbedding3D_get_extended_index(self, o)
4531 r"""get_index(LogEmbedding3D self, Vector3D o) -> GridIndex3D"""
4532 return _IMP_algebra.LogEmbedding3D_get_index(self, o)
4534 def get_center(self, *args):
4536 get_center(LogEmbedding3D self, ExtendedGridIndex3D ei) -> Vector3D
4537 get_center(LogEmbedding3D self, GridIndex3D ei) -> Vector3D
4539 return _IMP_algebra.LogEmbedding3D_get_center(self, *args)
4541 def get_bounding_box(self, *args):
4543 get_bounding_box(LogEmbedding3D self, ExtendedGridIndex3D ei) -> BoundingBox3D
4544 get_bounding_box(LogEmbedding3D self, GridIndex3D ei) -> BoundingBox3D
4546 return _IMP_algebra.LogEmbedding3D_get_bounding_box(self, *args)
4548 def show(self, *args):
4549 r"""show(LogEmbedding3D self, _ostream out=std::cout)"""
4550 return _IMP_algebra.LogEmbedding3D_show(self, *args)
4553 r"""__str__(LogEmbedding3D self) -> std::string"""
4554 return _IMP_algebra.LogEmbedding3D___str__(self)
4557 r"""__repr__(LogEmbedding3D self) -> std::string"""
4558 return _IMP_algebra.LogEmbedding3D___repr__(self)
4560 def __cmp__(self, arg2):
4561 r"""__cmp__(LogEmbedding3D self, LogEmbedding3D arg2) -> int"""
4562 return _IMP_algebra.LogEmbedding3D___cmp__(self, arg2)
4564 def __eq__(self, arg2):
4565 r"""__eq__(LogEmbedding3D self, LogEmbedding3D arg2) -> bool"""
4566 return _IMP_algebra.LogEmbedding3D___eq__(self, arg2)
4568 def _get_as_binary(self):
4569 r"""_get_as_binary(LogEmbedding3D self) -> PyObject *"""
4570 return _IMP_algebra.LogEmbedding3D__get_as_binary(self)
4572 def _set_from_binary(self, p):
4573 r"""_set_from_binary(LogEmbedding3D self, PyObject * p)"""
4574 return _IMP_algebra.LogEmbedding3D__set_from_binary(self, p)
4576 def __getstate__(self):
4577 p = self._get_as_binary()
4578 if len(self.__dict__) > 1:
4579 d = self.__dict__.copy()
4584 def __setstate__(self, p):
4585 if not hasattr(self,
'this'):
4587 if isinstance(p, tuple):
4589 self.__dict__.update(d)
4590 return self._set_from_binary(p)
4592 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding3D
4595 _IMP_algebra.LogEmbedding3D_swigregister(LogEmbedding3D)
4596 class LogEmbeddingKD(object):
4597 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< -1 > class."""
4599 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4601 def __init__(self, *args):
4603 __init__(LogEmbeddingKD self, VectorKD origin, VectorKD cell, VectorKD base) -> LogEmbeddingKD
4604 __init__(LogEmbeddingKD self, BoundingBoxKD bb, VectorKD bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbeddingKD
4605 __init__(LogEmbeddingKD self, VectorKD arg2, VectorKD arg3) -> LogEmbeddingKD
4606 __init__(LogEmbeddingKD self) -> LogEmbeddingKD
4608 _IMP_algebra.LogEmbeddingKD_swiginit(self, _IMP_algebra.new_LogEmbeddingKD(*args))
4610 def set_origin(self, o):
4611 r"""set_origin(LogEmbeddingKD self, VectorKD o)"""
4612 return _IMP_algebra.LogEmbeddingKD_set_origin(self, o)
4614 def get_origin(self):
4615 r"""get_origin(LogEmbeddingKD self) -> VectorKD"""
4616 return _IMP_algebra.LogEmbeddingKD_get_origin(self)
4618 def get_dimension(self):
4619 r"""get_dimension(LogEmbeddingKD self) -> unsigned int"""
4620 return _IMP_algebra.LogEmbeddingKD_get_dimension(self)
4622 def set_unit_cell(self, *args):
4624 set_unit_cell(LogEmbeddingKD self, VectorKD o, VectorKD base)
4625 set_unit_cell(LogEmbeddingKD self, VectorKD o)
4627 return _IMP_algebra.LogEmbeddingKD_set_unit_cell(self, *args)
4629 def get_unit_cell(self):
4630 r"""get_unit_cell(LogEmbeddingKD self) -> VectorKD"""
4631 return _IMP_algebra.LogEmbeddingKD_get_unit_cell(self)
4633 def get_extended_index(self, o):
4634 r"""get_extended_index(LogEmbeddingKD self, VectorKD o) -> ExtendedGridIndexKD"""
4635 return _IMP_algebra.LogEmbeddingKD_get_extended_index(self, o)
4638 r"""get_index(LogEmbeddingKD self, VectorKD o) -> GridIndexKD"""
4639 return _IMP_algebra.LogEmbeddingKD_get_index(self, o)
4641 def get_center(self, *args):
4643 get_center(LogEmbeddingKD self, ExtendedGridIndexKD ei) -> VectorKD
4644 get_center(LogEmbeddingKD self, GridIndexKD ei) -> VectorKD
4646 return _IMP_algebra.LogEmbeddingKD_get_center(self, *args)
4648 def get_bounding_box(self, *args):
4650 get_bounding_box(LogEmbeddingKD self, ExtendedGridIndexKD ei) -> BoundingBoxKD
4651 get_bounding_box(LogEmbeddingKD self, GridIndexKD ei) -> BoundingBoxKD
4653 return _IMP_algebra.LogEmbeddingKD_get_bounding_box(self, *args)
4655 def show(self, *args):
4656 r"""show(LogEmbeddingKD self, _ostream out=std::cout)"""
4657 return _IMP_algebra.LogEmbeddingKD_show(self, *args)
4660 r"""__str__(LogEmbeddingKD self) -> std::string"""
4661 return _IMP_algebra.LogEmbeddingKD___str__(self)
4664 r"""__repr__(LogEmbeddingKD self) -> std::string"""
4665 return _IMP_algebra.LogEmbeddingKD___repr__(self)
4667 def __cmp__(self, arg2):
4668 r"""__cmp__(LogEmbeddingKD self, LogEmbeddingKD arg2) -> int"""
4669 return _IMP_algebra.LogEmbeddingKD___cmp__(self, arg2)
4671 def __eq__(self, arg2):
4672 r"""__eq__(LogEmbeddingKD self, LogEmbeddingKD arg2) -> bool"""
4673 return _IMP_algebra.LogEmbeddingKD___eq__(self, arg2)
4675 def _get_as_binary(self):
4676 r"""_get_as_binary(LogEmbeddingKD self) -> PyObject *"""
4677 return _IMP_algebra.LogEmbeddingKD__get_as_binary(self)
4679 def _set_from_binary(self, p):
4680 r"""_set_from_binary(LogEmbeddingKD self, PyObject * p)"""
4681 return _IMP_algebra.LogEmbeddingKD__set_from_binary(self, p)
4683 def __getstate__(self):
4684 p = self._get_as_binary()
4685 if len(self.__dict__) > 1:
4686 d = self.__dict__.copy()
4691 def __setstate__(self, p):
4692 if not hasattr(self,
'this'):
4694 if isinstance(p, tuple):
4696 self.__dict__.update(d)
4697 return self._set_from_binary(p)
4699 __swig_destroy__ = _IMP_algebra.delete_LogEmbeddingKD
4702 _IMP_algebra.LogEmbeddingKD_swigregister(LogEmbeddingKD)
4703 class DenseFloatLogGridKD(object):
4704 r"""Proxy of C++ IMP::algebra::DenseFloatLogGridKD class."""
4706 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4708 def __init__(self, sz, le):
4709 r"""__init__(DenseFloatLogGridKD self, IMP::Ints const & sz, LogEmbeddingKD le) -> DenseFloatLogGridKD"""
4710 _IMP_algebra.DenseFloatLogGridKD_swiginit(self, _IMP_algebra.new_DenseFloatLogGridKD(sz, le))
4712 def add_voxel(self, i, q):
4713 r"""add_voxel(DenseFloatLogGridKD self, ExtendedGridIndexKD i, float const & q) -> GridIndexKD"""
4714 return _IMP_algebra.DenseFloatLogGridKD_add_voxel(self, i, q)
4716 def __getitem__(self, *args):
4718 __getitem__(DenseFloatLogGridKD self, GridIndexKD i) -> float
4719 __getitem__(DenseFloatLogGridKD self, VectorKD i) -> float
4721 return _IMP_algebra.DenseFloatLogGridKD___getitem__(self, *args)
4723 def __setitem__(self, *args):
4725 __setitem__(DenseFloatLogGridKD self, GridIndexKD i, float const & q)
4726 __setitem__(DenseFloatLogGridKD self, VectorKD i, float const & q)
4728 return _IMP_algebra.DenseFloatLogGridKD___setitem__(self, *args)
4730 def get_bounding_box(self, *args):
4732 get_bounding_box(DenseFloatLogGridKD self, ExtendedGridIndexKD v) -> BoundingBoxKD
4733 get_bounding_box(DenseFloatLogGridKD self) -> BoundingBoxKD
4735 return _IMP_algebra.DenseFloatLogGridKD_get_bounding_box(self, *args)
4739 get_indexes(DenseFloatLogGridKD self, BoundingBoxKD bb) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >
4740 get_indexes(DenseFloatLogGridKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >
4742 return _IMP_algebra.DenseFloatLogGridKD_get_indexes(self, *args)
4744 def get_all_indexes(self):
4745 r"""get_all_indexes(DenseFloatLogGridKD self) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >"""
4746 return _IMP_algebra.DenseFloatLogGridKD_get_all_indexes(self)
4748 def get_extended_indexes(self, *args):
4750 get_extended_indexes(DenseFloatLogGridKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 >,std::allocator< IMP::algebra::ExtendedGridIndexD< -1 > > >
4751 get_extended_indexes(DenseFloatLogGridKD self, BoundingBoxKD bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 >,std::allocator< IMP::algebra::ExtendedGridIndexD< -1 > > >
4753 return _IMP_algebra.DenseFloatLogGridKD_get_extended_indexes(self, *args)
4755 def get_center(self, *args):
4757 get_center(DenseFloatLogGridKD self, ExtendedGridIndexKD ei) -> VectorKD
4758 get_center(DenseFloatLogGridKD self, GridIndexKD ei) -> VectorKD
4760 return _IMP_algebra.DenseFloatLogGridKD_get_center(self, *args)
4762 def get_extended_index(self, v):
4763 r"""get_extended_index(DenseFloatLogGridKD self, VectorKD v) -> ExtendedGridIndexKD"""
4764 return _IMP_algebra.DenseFloatLogGridKD_get_extended_index(self, v)
4767 r"""get_index(DenseFloatLogGridKD self, ExtendedGridIndexKD v) -> GridIndexKD"""
4768 return _IMP_algebra.DenseFloatLogGridKD_get_index(self, v)
4770 def get_origin(self):
4771 r"""get_origin(DenseFloatLogGridKD self) -> VectorKD"""
4772 return _IMP_algebra.DenseFloatLogGridKD_get_origin(self)
4774 def get_dimension(self):
4775 r"""get_dimension(DenseFloatLogGridKD self) -> unsigned int"""
4776 return _IMP_algebra.DenseFloatLogGridKD_get_dimension(self)
4778 def get_unit_cell(self):
4779 r"""get_unit_cell(DenseFloatLogGridKD self) -> VectorKD"""
4780 return _IMP_algebra.DenseFloatLogGridKD_get_unit_cell(self)
4782 def get_has_index(self, v):
4783 r"""get_has_index(DenseFloatLogGridKD self, ExtendedGridIndexKD v) -> bool"""
4784 return _IMP_algebra.DenseFloatLogGridKD_get_has_index(self, v)
4787 r"""__str__(DenseFloatLogGridKD self) -> std::string"""
4788 return _IMP_algebra.DenseFloatLogGridKD___str__(self)
4791 r"""__repr__(DenseFloatLogGridKD self) -> std::string"""
4792 return _IMP_algebra.DenseFloatLogGridKD___repr__(self)
4794 def show(self, *args):
4795 r"""show(DenseFloatLogGridKD self, _ostream out=std::cout)"""
4796 return _IMP_algebra.DenseFloatLogGridKD_show(self, *args)
4797 __swig_destroy__ = _IMP_algebra.delete_DenseFloatLogGridKD
4800 _IMP_algebra.DenseFloatLogGridKD_swigregister(DenseFloatLogGridKD)
4801 class DenseIntLogGrid3D(object):
4802 r"""Proxy of C++ IMP::algebra::DenseIntLogGrid3D class."""
4804 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4806 def __init__(self, sz, le):
4807 r"""__init__(DenseIntLogGrid3D self, IMP::Ints const & sz, LogEmbedding3D le) -> DenseIntLogGrid3D"""
4808 _IMP_algebra.DenseIntLogGrid3D_swiginit(self, _IMP_algebra.new_DenseIntLogGrid3D(sz, le))
4810 def add_voxel(self, i, q):
4811 r"""add_voxel(DenseIntLogGrid3D self, ExtendedGridIndex3D i, int const & q) -> GridIndex3D"""
4812 return _IMP_algebra.DenseIntLogGrid3D_add_voxel(self, i, q)
4814 def __getitem__(self, *args):
4816 __getitem__(DenseIntLogGrid3D self, GridIndex3D i) -> int
4817 __getitem__(DenseIntLogGrid3D self, Vector3D i) -> int
4819 return _IMP_algebra.DenseIntLogGrid3D___getitem__(self, *args)
4821 def __setitem__(self, *args):
4823 __setitem__(DenseIntLogGrid3D self, GridIndex3D i, int const & q)
4824 __setitem__(DenseIntLogGrid3D self, Vector3D i, int const & q)
4826 return _IMP_algebra.DenseIntLogGrid3D___setitem__(self, *args)
4828 def get_bounding_box(self, *args):
4830 get_bounding_box(DenseIntLogGrid3D self, ExtendedGridIndex3D v) -> BoundingBox3D
4831 get_bounding_box(DenseIntLogGrid3D self) -> BoundingBox3D
4833 return _IMP_algebra.DenseIntLogGrid3D_get_bounding_box(self, *args)
4837 get_indexes(DenseIntLogGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
4838 get_indexes(DenseIntLogGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
4840 return _IMP_algebra.DenseIntLogGrid3D_get_indexes(self, *args)
4842 def get_all_indexes(self):
4843 r"""get_all_indexes(DenseIntLogGrid3D self) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >"""
4844 return _IMP_algebra.DenseIntLogGrid3D_get_all_indexes(self)
4846 def get_extended_indexes(self, *args):
4848 get_extended_indexes(DenseIntLogGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
4849 get_extended_indexes(DenseIntLogGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
4851 return _IMP_algebra.DenseIntLogGrid3D_get_extended_indexes(self, *args)
4853 def get_center(self, *args):
4855 get_center(DenseIntLogGrid3D self, ExtendedGridIndex3D ei) -> Vector3D
4856 get_center(DenseIntLogGrid3D self, GridIndex3D ei) -> Vector3D
4858 return _IMP_algebra.DenseIntLogGrid3D_get_center(self, *args)
4860 def get_extended_index(self, v):
4861 r"""get_extended_index(DenseIntLogGrid3D self, Vector3D v) -> ExtendedGridIndex3D"""
4862 return _IMP_algebra.DenseIntLogGrid3D_get_extended_index(self, v)
4865 r"""get_index(DenseIntLogGrid3D self, ExtendedGridIndex3D v) -> GridIndex3D"""
4866 return _IMP_algebra.DenseIntLogGrid3D_get_index(self, v)
4868 def get_origin(self):
4869 r"""get_origin(DenseIntLogGrid3D self) -> Vector3D"""
4870 return _IMP_algebra.DenseIntLogGrid3D_get_origin(self)
4872 def get_dimension(self):
4873 r"""get_dimension(DenseIntLogGrid3D self) -> unsigned int"""
4874 return _IMP_algebra.DenseIntLogGrid3D_get_dimension(self)
4876 def get_unit_cell(self):
4877 r"""get_unit_cell(DenseIntLogGrid3D self) -> Vector3D"""
4878 return _IMP_algebra.DenseIntLogGrid3D_get_unit_cell(self)
4880 def get_has_index(self, v):
4881 r"""get_has_index(DenseIntLogGrid3D self, ExtendedGridIndex3D v) -> bool"""
4882 return _IMP_algebra.DenseIntLogGrid3D_get_has_index(self, v)
4885 r"""__str__(DenseIntLogGrid3D self) -> std::string"""
4886 return _IMP_algebra.DenseIntLogGrid3D___str__(self)
4889 r"""__repr__(DenseIntLogGrid3D self) -> std::string"""
4890 return _IMP_algebra.DenseIntLogGrid3D___repr__(self)
4892 def show(self, *args):
4893 r"""show(DenseIntLogGrid3D self, _ostream out=std::cout)"""
4894 return _IMP_algebra.DenseIntLogGrid3D_show(self, *args)
4895 __swig_destroy__ = _IMP_algebra.delete_DenseIntLogGrid3D
4898 _IMP_algebra.DenseIntLogGrid3D_swigregister(DenseIntLogGrid3D)
4900 r"""Proxy of C++ IMP::algebra::DenseGrid3D< double > class."""
4902 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
4904 def __init__(self, *args):
4906 __init__(DenseDoubleGrid3D self, double side, BoundingBox3D bb, double _def=double()) -> DenseDoubleGrid3D
4907 __init__(DenseDoubleGrid3D self) -> DenseDoubleGrid3D
4909 _IMP_algebra.DenseDoubleGrid3D_swiginit(self, _IMP_algebra.new_DenseDoubleGrid3D(*args))
4911 def add_voxel(self, i, q):
4912 r"""add_voxel(DenseDoubleGrid3D self, ExtendedGridIndex3D i, double const & q) -> GridIndex3D"""
4913 return _IMP_algebra.DenseDoubleGrid3D_add_voxel(self, i, q)
4915 def __getitem__(self, *args):
4917 __getitem__(DenseDoubleGrid3D self, GridIndex3D i) -> double
4918 __getitem__(DenseDoubleGrid3D self, Vector3D i) -> double
4920 return _IMP_algebra.DenseDoubleGrid3D___getitem__(self, *args)
4922 def __setitem__(self, *args):
4924 __setitem__(DenseDoubleGrid3D self, GridIndex3D i, double const & q)
4925 __setitem__(DenseDoubleGrid3D self, Vector3D i, double const & q)
4927 return _IMP_algebra.DenseDoubleGrid3D___setitem__(self, *args)
4929 def get_bounding_box(self, *args):
4931 get_bounding_box(DenseDoubleGrid3D self, ExtendedGridIndex3D v) -> BoundingBox3D
4932 get_bounding_box(DenseDoubleGrid3D self) -> BoundingBox3D
4934 return _IMP_algebra.DenseDoubleGrid3D_get_bounding_box(self, *args)
4938 get_indexes(DenseDoubleGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
4939 get_indexes(DenseDoubleGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
4941 return _IMP_algebra.DenseDoubleGrid3D_get_indexes(self, *args)
4943 def get_all_indexes(self):
4944 r"""get_all_indexes(DenseDoubleGrid3D self) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >"""
4945 return _IMP_algebra.DenseDoubleGrid3D_get_all_indexes(self)
4947 def get_extended_indexes(self, *args):
4949 get_extended_indexes(DenseDoubleGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
4950 get_extended_indexes(DenseDoubleGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
4952 return _IMP_algebra.DenseDoubleGrid3D_get_extended_indexes(self, *args)
4954 def get_center(self, *args):
4956 get_center(DenseDoubleGrid3D self, ExtendedGridIndex3D ei) -> Vector3D
4957 get_center(DenseDoubleGrid3D self, GridIndex3D ei) -> Vector3D
4959 return _IMP_algebra.DenseDoubleGrid3D_get_center(self, *args)
4961 def get_extended_index(self, v):
4962 r"""get_extended_index(DenseDoubleGrid3D self, Vector3D v) -> ExtendedGridIndex3D"""
4963 return _IMP_algebra.DenseDoubleGrid3D_get_extended_index(self, v)
4966 r"""get_index(DenseDoubleGrid3D self, ExtendedGridIndex3D v) -> GridIndex3D"""
4967 return _IMP_algebra.DenseDoubleGrid3D_get_index(self, v)
4969 def get_origin(self):
4970 r"""get_origin(DenseDoubleGrid3D self) -> Vector3D"""
4971 return _IMP_algebra.DenseDoubleGrid3D_get_origin(self)
4973 def get_dimension(self):
4974 r"""get_dimension(DenseDoubleGrid3D self) -> unsigned int"""
4975 return _IMP_algebra.DenseDoubleGrid3D_get_dimension(self)
4977 def get_unit_cell(self):
4978 r"""get_unit_cell(DenseDoubleGrid3D self) -> Vector3D"""
4979 return _IMP_algebra.DenseDoubleGrid3D_get_unit_cell(self)
4981 def get_has_index(self, v):
4982 r"""get_has_index(DenseDoubleGrid3D self, ExtendedGridIndex3D v) -> bool"""
4983 return _IMP_algebra.DenseDoubleGrid3D_get_has_index(self, v)
4986 r"""__str__(DenseDoubleGrid3D self) -> std::string"""
4987 return _IMP_algebra.DenseDoubleGrid3D___str__(self)
4990 r"""__repr__(DenseDoubleGrid3D self) -> std::string"""
4991 return _IMP_algebra.DenseDoubleGrid3D___repr__(self)
4993 def show(self, *args):
4994 r"""show(DenseDoubleGrid3D self, _ostream out=std::cout)"""
4995 return _IMP_algebra.DenseDoubleGrid3D_show(self, *args)
4996 __swig_destroy__ = _IMP_algebra.delete_DenseDoubleGrid3D
4999 _IMP_algebra.DenseDoubleGrid3D_swigregister(DenseDoubleGrid3D)
5001 r"""Proxy of C++ IMP::algebra::DenseGrid3D< float > class."""
5003 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5005 def __init__(self, *args):
5007 __init__(DenseFloatGrid3D self, double side, BoundingBox3D bb, float _def=float()) -> DenseFloatGrid3D
5008 __init__(DenseFloatGrid3D self) -> DenseFloatGrid3D
5010 _IMP_algebra.DenseFloatGrid3D_swiginit(self, _IMP_algebra.new_DenseFloatGrid3D(*args))
5012 def add_voxel(self, i, q):
5013 r"""add_voxel(DenseFloatGrid3D self, ExtendedGridIndex3D i, float const & q) -> GridIndex3D"""
5014 return _IMP_algebra.DenseFloatGrid3D_add_voxel(self, i, q)
5016 def __getitem__(self, *args):
5018 __getitem__(DenseFloatGrid3D self, GridIndex3D i) -> float
5019 __getitem__(DenseFloatGrid3D self, Vector3D i) -> float
5021 return _IMP_algebra.DenseFloatGrid3D___getitem__(self, *args)
5023 def __setitem__(self, *args):
5025 __setitem__(DenseFloatGrid3D self, GridIndex3D i, float const & q)
5026 __setitem__(DenseFloatGrid3D self, Vector3D i, float const & q)
5028 return _IMP_algebra.DenseFloatGrid3D___setitem__(self, *args)
5030 def get_bounding_box(self, *args):
5032 get_bounding_box(DenseFloatGrid3D self, ExtendedGridIndex3D v) -> BoundingBox3D
5033 get_bounding_box(DenseFloatGrid3D self) -> BoundingBox3D
5035 return _IMP_algebra.DenseFloatGrid3D_get_bounding_box(self, *args)
5039 get_indexes(DenseFloatGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
5040 get_indexes(DenseFloatGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
5042 return _IMP_algebra.DenseFloatGrid3D_get_indexes(self, *args)
5044 def get_all_indexes(self):
5045 r"""get_all_indexes(DenseFloatGrid3D self) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >"""
5046 return _IMP_algebra.DenseFloatGrid3D_get_all_indexes(self)
5048 def get_extended_indexes(self, *args):
5050 get_extended_indexes(DenseFloatGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
5051 get_extended_indexes(DenseFloatGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
5053 return _IMP_algebra.DenseFloatGrid3D_get_extended_indexes(self, *args)
5055 def get_center(self, *args):
5057 get_center(DenseFloatGrid3D self, ExtendedGridIndex3D ei) -> Vector3D
5058 get_center(DenseFloatGrid3D self, GridIndex3D ei) -> Vector3D
5060 return _IMP_algebra.DenseFloatGrid3D_get_center(self, *args)
5062 def get_extended_index(self, v):
5063 r"""get_extended_index(DenseFloatGrid3D self, Vector3D v) -> ExtendedGridIndex3D"""
5064 return _IMP_algebra.DenseFloatGrid3D_get_extended_index(self, v)
5067 r"""get_index(DenseFloatGrid3D self, ExtendedGridIndex3D v) -> GridIndex3D"""
5068 return _IMP_algebra.DenseFloatGrid3D_get_index(self, v)
5070 def get_origin(self):
5071 r"""get_origin(DenseFloatGrid3D self) -> Vector3D"""
5072 return _IMP_algebra.DenseFloatGrid3D_get_origin(self)
5074 def get_dimension(self):
5075 r"""get_dimension(DenseFloatGrid3D self) -> unsigned int"""
5076 return _IMP_algebra.DenseFloatGrid3D_get_dimension(self)
5078 def get_unit_cell(self):
5079 r"""get_unit_cell(DenseFloatGrid3D self) -> Vector3D"""
5080 return _IMP_algebra.DenseFloatGrid3D_get_unit_cell(self)
5082 def get_has_index(self, v):
5083 r"""get_has_index(DenseFloatGrid3D self, ExtendedGridIndex3D v) -> bool"""
5084 return _IMP_algebra.DenseFloatGrid3D_get_has_index(self, v)
5087 r"""__str__(DenseFloatGrid3D self) -> std::string"""
5088 return _IMP_algebra.DenseFloatGrid3D___str__(self)
5091 r"""__repr__(DenseFloatGrid3D self) -> std::string"""
5092 return _IMP_algebra.DenseFloatGrid3D___repr__(self)
5094 def show(self, *args):
5095 r"""show(DenseFloatGrid3D self, _ostream out=std::cout)"""
5096 return _IMP_algebra.DenseFloatGrid3D_show(self, *args)
5097 __swig_destroy__ = _IMP_algebra.delete_DenseFloatGrid3D
5100 _IMP_algebra.DenseFloatGrid3D_swigregister(DenseFloatGrid3D)
5102 r"""Proxy of C++ IMP::algebra::SparseUnboundedGrid3D< int > class."""
5104 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5106 def __init__(self, *args):
5108 __init__(SparseUnboundedIntGrid3D self, double side, Vector3D origin, int _def=int()) -> SparseUnboundedIntGrid3D
5109 __init__(SparseUnboundedIntGrid3D self, Vector3D sides, Vector3D origin, int _def=int()) -> SparseUnboundedIntGrid3D
5110 __init__(SparseUnboundedIntGrid3D self) -> SparseUnboundedIntGrid3D
5112 _IMP_algebra.SparseUnboundedIntGrid3D_swiginit(self, _IMP_algebra.new_SparseUnboundedIntGrid3D(*args))
5114 def add_voxel(self, i, q):
5115 r"""add_voxel(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D i, int const & q) -> GridIndex3D"""
5116 return _IMP_algebra.SparseUnboundedIntGrid3D_add_voxel(self, i, q)
5118 def __getitem__(self, *args):
5120 __getitem__(SparseUnboundedIntGrid3D self, GridIndex3D i) -> int
5121 __getitem__(SparseUnboundedIntGrid3D self, Vector3D i) -> int
5123 return _IMP_algebra.SparseUnboundedIntGrid3D___getitem__(self, *args)
5125 def __setitem__(self, *args):
5127 __setitem__(SparseUnboundedIntGrid3D self, GridIndex3D i, int const & q)
5128 __setitem__(SparseUnboundedIntGrid3D self, Vector3D i, int const & q)
5130 return _IMP_algebra.SparseUnboundedIntGrid3D___setitem__(self, *args)
5132 def get_bounding_box(self, *args):
5134 get_bounding_box(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D v) -> BoundingBox3D
5135 get_bounding_box(SparseUnboundedIntGrid3D self) -> BoundingBox3D
5137 return _IMP_algebra.SparseUnboundedIntGrid3D_get_bounding_box(self, *args)
5141 get_indexes(SparseUnboundedIntGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
5142 get_indexes(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >
5144 return _IMP_algebra.SparseUnboundedIntGrid3D_get_indexes(self, *args)
5146 def get_all_indexes(self):
5147 r"""get_all_indexes(SparseUnboundedIntGrid3D self) -> IMP::Vector< IMP::algebra::GridIndexD< 3 >,std::allocator< IMP::algebra::GridIndexD< 3 > > >"""
5148 return _IMP_algebra.SparseUnboundedIntGrid3D_get_all_indexes(self)
5150 def get_extended_indexes(self, *args):
5152 get_extended_indexes(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
5153 get_extended_indexes(SparseUnboundedIntGrid3D self, BoundingBox3D bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 >,std::allocator< IMP::algebra::ExtendedGridIndexD< 3 > > >
5155 return _IMP_algebra.SparseUnboundedIntGrid3D_get_extended_indexes(self, *args)
5157 def get_center(self, *args):
5159 get_center(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D ei) -> Vector3D
5160 get_center(SparseUnboundedIntGrid3D self, GridIndex3D ei) -> Vector3D
5162 return _IMP_algebra.SparseUnboundedIntGrid3D_get_center(self, *args)
5164 def get_extended_index(self, v):
5165 r"""get_extended_index(SparseUnboundedIntGrid3D self, Vector3D v) -> ExtendedGridIndex3D"""
5166 return _IMP_algebra.SparseUnboundedIntGrid3D_get_extended_index(self, v)
5169 r"""get_index(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D v) -> GridIndex3D"""
5170 return _IMP_algebra.SparseUnboundedIntGrid3D_get_index(self, v)
5172 def get_origin(self):
5173 r"""get_origin(SparseUnboundedIntGrid3D self) -> Vector3D"""
5174 return _IMP_algebra.SparseUnboundedIntGrid3D_get_origin(self)
5176 def get_dimension(self):
5177 r"""get_dimension(SparseUnboundedIntGrid3D self) -> unsigned int"""
5178 return _IMP_algebra.SparseUnboundedIntGrid3D_get_dimension(self)
5180 def get_unit_cell(self):
5181 r"""get_unit_cell(SparseUnboundedIntGrid3D self) -> Vector3D"""
5182 return _IMP_algebra.SparseUnboundedIntGrid3D_get_unit_cell(self)
5184 def get_has_index(self, v):
5185 r"""get_has_index(SparseUnboundedIntGrid3D self, ExtendedGridIndex3D v) -> bool"""
5186 return _IMP_algebra.SparseUnboundedIntGrid3D_get_has_index(self, v)
5189 r"""__str__(SparseUnboundedIntGrid3D self) -> std::string"""
5190 return _IMP_algebra.SparseUnboundedIntGrid3D___str__(self)
5193 r"""__repr__(SparseUnboundedIntGrid3D self) -> std::string"""
5194 return _IMP_algebra.SparseUnboundedIntGrid3D___repr__(self)
5196 def show(self, *args):
5197 r"""show(SparseUnboundedIntGrid3D self, _ostream out=std::cout)"""
5198 return _IMP_algebra.SparseUnboundedIntGrid3D_show(self, *args)
5199 __swig_destroy__ = _IMP_algebra.delete_SparseUnboundedIntGrid3D
5202 _IMP_algebra.SparseUnboundedIntGrid3D_swigregister(SparseUnboundedIntGrid3D)
5203 class SparseUnboundedIntGridKD(object):
5204 r"""Proxy of C++ IMP::algebra::SparseUnboundedGridD< -1,int > class."""
5206 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5208 def __init__(self, *args):
5210 __init__(SparseUnboundedIntGridKD self, double side, VectorKD origin, int _def=int()) -> SparseUnboundedIntGridKD
5211 __init__(SparseUnboundedIntGridKD self) -> SparseUnboundedIntGridKD
5213 _IMP_algebra.SparseUnboundedIntGridKD_swiginit(self, _IMP_algebra.new_SparseUnboundedIntGridKD(*args))
5215 def add_voxel(self, i, q):
5216 r"""add_voxel(SparseUnboundedIntGridKD self, ExtendedGridIndexKD i, int const & q) -> GridIndexKD"""
5217 return _IMP_algebra.SparseUnboundedIntGridKD_add_voxel(self, i, q)
5219 def __getitem__(self, *args):
5221 __getitem__(SparseUnboundedIntGridKD self, GridIndexKD i) -> int
5222 __getitem__(SparseUnboundedIntGridKD self, VectorKD i) -> int
5224 return _IMP_algebra.SparseUnboundedIntGridKD___getitem__(self, *args)
5226 def __setitem__(self, *args):
5228 __setitem__(SparseUnboundedIntGridKD self, GridIndexKD i, int const & q)
5229 __setitem__(SparseUnboundedIntGridKD self, VectorKD i, int const & q)
5231 return _IMP_algebra.SparseUnboundedIntGridKD___setitem__(self, *args)
5233 def get_bounding_box(self, *args):
5235 get_bounding_box(SparseUnboundedIntGridKD self, ExtendedGridIndexKD v) -> BoundingBoxKD
5236 get_bounding_box(SparseUnboundedIntGridKD self) -> BoundingBoxKD
5238 return _IMP_algebra.SparseUnboundedIntGridKD_get_bounding_box(self, *args)
5242 get_indexes(SparseUnboundedIntGridKD self, BoundingBoxKD bb) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >
5243 get_indexes(SparseUnboundedIntGridKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >
5245 return _IMP_algebra.SparseUnboundedIntGridKD_get_indexes(self, *args)
5247 def get_all_indexes(self):
5248 r"""get_all_indexes(SparseUnboundedIntGridKD self) -> IMP::Vector< IMP::algebra::GridIndexD< -1 >,std::allocator< IMP::algebra::GridIndexD< -1 > > >"""
5249 return _IMP_algebra.SparseUnboundedIntGridKD_get_all_indexes(self)
5251 def get_extended_indexes(self, *args):
5253 get_extended_indexes(SparseUnboundedIntGridKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 >,std::allocator< IMP::algebra::ExtendedGridIndexD< -1 > > >
5254 get_extended_indexes(SparseUnboundedIntGridKD self, BoundingBoxKD bb) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 >,std::allocator< IMP::algebra::ExtendedGridIndexD< -1 > > >
5256 return _IMP_algebra.SparseUnboundedIntGridKD_get_extended_indexes(self, *args)
5258 def get_center(self, *args):
5260 get_center(SparseUnboundedIntGridKD self, ExtendedGridIndexKD ei) -> VectorKD
5261 get_center(SparseUnboundedIntGridKD self, GridIndexKD ei) -> VectorKD
5263 return _IMP_algebra.SparseUnboundedIntGridKD_get_center(self, *args)
5265 def get_extended_index(self, v):
5266 r"""get_extended_index(SparseUnboundedIntGridKD self, VectorKD v) -> ExtendedGridIndexKD"""
5267 return _IMP_algebra.SparseUnboundedIntGridKD_get_extended_index(self, v)
5270 r"""get_index(SparseUnboundedIntGridKD self, ExtendedGridIndexKD v) -> GridIndexKD"""
5271 return _IMP_algebra.SparseUnboundedIntGridKD_get_index(self, v)
5273 def get_origin(self):
5274 r"""get_origin(SparseUnboundedIntGridKD self) -> VectorKD"""
5275 return _IMP_algebra.SparseUnboundedIntGridKD_get_origin(self)
5277 def get_dimension(self):
5278 r"""get_dimension(SparseUnboundedIntGridKD self) -> unsigned int"""
5279 return _IMP_algebra.SparseUnboundedIntGridKD_get_dimension(self)
5281 def get_unit_cell(self):
5282 r"""get_unit_cell(SparseUnboundedIntGridKD self) -> VectorKD"""
5283 return _IMP_algebra.SparseUnboundedIntGridKD_get_unit_cell(self)
5285 def get_has_index(self, v):
5286 r"""get_has_index(SparseUnboundedIntGridKD self, ExtendedGridIndexKD v) -> bool"""
5287 return _IMP_algebra.SparseUnboundedIntGridKD_get_has_index(self, v)
5290 r"""__str__(SparseUnboundedIntGridKD self) -> std::string"""
5291 return _IMP_algebra.SparseUnboundedIntGridKD___str__(self)
5294 r"""__repr__(SparseUnboundedIntGridKD self) -> std::string"""
5295 return _IMP_algebra.SparseUnboundedIntGridKD___repr__(self)
5297 def show(self, *args):
5298 r"""show(SparseUnboundedIntGridKD self, _ostream out=std::cout)"""
5299 return _IMP_algebra.SparseUnboundedIntGridKD_show(self, *args)
5300 __swig_destroy__ = _IMP_algebra.delete_SparseUnboundedIntGridKD
5303 _IMP_algebra.SparseUnboundedIntGridKD_swigregister(SparseUnboundedIntGridKD)
5304 class GridIndex1D(IMP._Value):
5305 r"""Proxy of C++ IMP::algebra::GridIndexD< 1 > class."""
5307 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5309 def __init__(self, *args):
5311 __init__(GridIndex1D self) -> GridIndex1D
5312 __init__(GridIndex1D self, int x) -> GridIndex1D
5313 __init__(GridIndex1D self, int x, int y) -> GridIndex1D
5314 __init__(GridIndex1D self, int x, int y, int z) -> GridIndex1D
5315 __init__(GridIndex1D self, int i, int j, int k, int l) -> GridIndex1D
5316 __init__(GridIndex1D self, int i, int j, int k, int l, int m) -> GridIndex1D
5317 __init__(GridIndex1D self, int i, int j, int k, int l, int m, int n) -> GridIndex1D
5319 _IMP_algebra.GridIndex1D_swiginit(self, _IMP_algebra.new_GridIndex1D(*args))
5321 def get_dimension(self):
5322 r"""get_dimension(GridIndex1D self) -> unsigned int"""
5323 return _IMP_algebra.GridIndex1D_get_dimension(self)
5325 def __getitem__(self, i):
5326 r"""__getitem__(GridIndex1D self, unsigned int i) -> int const &"""
5327 return _IMP_algebra.GridIndex1D___getitem__(self, i)
5329 def show(self, *args):
5330 r"""show(GridIndex1D self, _ostream out=std::cout)"""
5331 return _IMP_algebra.GridIndex1D_show(self, *args)
5334 r"""__len__(GridIndex1D self) -> unsigned int"""
5335 return _IMP_algebra.GridIndex1D___len__(self)
5337 def __cmp__(self, o):
5338 r"""__cmp__(GridIndex1D self, GridIndex1D o) -> int"""
5339 return _IMP_algebra.GridIndex1D___cmp__(self, o)
5341 def __eq__(self, o):
5342 r"""__eq__(GridIndex1D self, GridIndex1D o) -> bool"""
5343 return _IMP_algebra.GridIndex1D___eq__(self, o)
5345 def __ne__(self, o):
5346 r"""__ne__(GridIndex1D self, GridIndex1D o) -> bool"""
5347 return _IMP_algebra.GridIndex1D___ne__(self, o)
5349 def __lt__(self, o):
5350 r"""__lt__(GridIndex1D self, GridIndex1D o) -> bool"""
5351 return _IMP_algebra.GridIndex1D___lt__(self, o)
5353 def __gt__(self, o):
5354 r"""__gt__(GridIndex1D self, GridIndex1D o) -> bool"""
5355 return _IMP_algebra.GridIndex1D___gt__(self, o)
5357 def __ge__(self, o):
5358 r"""__ge__(GridIndex1D self, GridIndex1D o) -> bool"""
5359 return _IMP_algebra.GridIndex1D___ge__(self, o)
5361 def __le__(self, o):
5362 r"""__le__(GridIndex1D self, GridIndex1D o) -> bool"""
5363 return _IMP_algebra.GridIndex1D___le__(self, o)
5366 r"""__hash__(GridIndex1D self) -> std::size_t"""
5367 return _IMP_algebra.GridIndex1D___hash__(self)
5370 r"""__str__(GridIndex1D self) -> std::string"""
5371 return _IMP_algebra.GridIndex1D___str__(self)
5374 r"""__repr__(GridIndex1D self) -> std::string"""
5375 return _IMP_algebra.GridIndex1D___repr__(self)
5377 def _get_as_binary(self):
5378 r"""_get_as_binary(GridIndex1D self) -> PyObject *"""
5379 return _IMP_algebra.GridIndex1D__get_as_binary(self)
5381 def _set_from_binary(self, p):
5382 r"""_set_from_binary(GridIndex1D self, PyObject * p)"""
5383 return _IMP_algebra.GridIndex1D__set_from_binary(self, p)
5385 def __getstate__(self):
5386 p = self._get_as_binary()
5387 if len(self.__dict__) > 1:
5388 d = self.__dict__.copy()
5393 def __setstate__(self, p):
5394 if not hasattr(self,
'this'):
5396 if isinstance(p, tuple):
5398 self.__dict__.update(d)
5399 return self._set_from_binary(p)
5401 __swig_destroy__ = _IMP_algebra.delete_GridIndex1D
5404 _IMP_algebra.GridIndex1D_swigregister(GridIndex1D)
5405 class GridIndex2D(IMP._Value):
5406 r"""Proxy of C++ IMP::algebra::GridIndexD< 2 > class."""
5408 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5410 def __init__(self, *args):
5412 __init__(GridIndex2D self) -> GridIndex2D
5413 __init__(GridIndex2D self, int x) -> GridIndex2D
5414 __init__(GridIndex2D self, int x, int y) -> GridIndex2D
5415 __init__(GridIndex2D self, int x, int y, int z) -> GridIndex2D
5416 __init__(GridIndex2D self, int i, int j, int k, int l) -> GridIndex2D
5417 __init__(GridIndex2D self, int i, int j, int k, int l, int m) -> GridIndex2D
5418 __init__(GridIndex2D self, int i, int j, int k, int l, int m, int n) -> GridIndex2D
5420 _IMP_algebra.GridIndex2D_swiginit(self, _IMP_algebra.new_GridIndex2D(*args))
5422 def get_dimension(self):
5423 r"""get_dimension(GridIndex2D self) -> unsigned int"""
5424 return _IMP_algebra.GridIndex2D_get_dimension(self)
5426 def __getitem__(self, i):
5427 r"""__getitem__(GridIndex2D self, unsigned int i) -> int const &"""
5428 return _IMP_algebra.GridIndex2D___getitem__(self, i)
5430 def show(self, *args):
5431 r"""show(GridIndex2D self, _ostream out=std::cout)"""
5432 return _IMP_algebra.GridIndex2D_show(self, *args)
5435 r"""__len__(GridIndex2D self) -> unsigned int"""
5436 return _IMP_algebra.GridIndex2D___len__(self)
5438 def __cmp__(self, o):
5439 r"""__cmp__(GridIndex2D self, GridIndex2D o) -> int"""
5440 return _IMP_algebra.GridIndex2D___cmp__(self, o)
5442 def __eq__(self, o):
5443 r"""__eq__(GridIndex2D self, GridIndex2D o) -> bool"""
5444 return _IMP_algebra.GridIndex2D___eq__(self, o)
5446 def __ne__(self, o):
5447 r"""__ne__(GridIndex2D self, GridIndex2D o) -> bool"""
5448 return _IMP_algebra.GridIndex2D___ne__(self, o)
5450 def __lt__(self, o):
5451 r"""__lt__(GridIndex2D self, GridIndex2D o) -> bool"""
5452 return _IMP_algebra.GridIndex2D___lt__(self, o)
5454 def __gt__(self, o):
5455 r"""__gt__(GridIndex2D self, GridIndex2D o) -> bool"""
5456 return _IMP_algebra.GridIndex2D___gt__(self, o)
5458 def __ge__(self, o):
5459 r"""__ge__(GridIndex2D self, GridIndex2D o) -> bool"""
5460 return _IMP_algebra.GridIndex2D___ge__(self, o)
5462 def __le__(self, o):
5463 r"""__le__(GridIndex2D self, GridIndex2D o) -> bool"""
5464 return _IMP_algebra.GridIndex2D___le__(self, o)
5467 r"""__hash__(GridIndex2D self) -> std::size_t"""
5468 return _IMP_algebra.GridIndex2D___hash__(self)
5471 r"""__str__(GridIndex2D self) -> std::string"""
5472 return _IMP_algebra.GridIndex2D___str__(self)
5475 r"""__repr__(GridIndex2D self) -> std::string"""
5476 return _IMP_algebra.GridIndex2D___repr__(self)
5478 def _get_as_binary(self):
5479 r"""_get_as_binary(GridIndex2D self) -> PyObject *"""
5480 return _IMP_algebra.GridIndex2D__get_as_binary(self)
5482 def _set_from_binary(self, p):
5483 r"""_set_from_binary(GridIndex2D self, PyObject * p)"""
5484 return _IMP_algebra.GridIndex2D__set_from_binary(self, p)
5486 def __getstate__(self):
5487 p = self._get_as_binary()
5488 if len(self.__dict__) > 1:
5489 d = self.__dict__.copy()
5494 def __setstate__(self, p):
5495 if not hasattr(self,
'this'):
5497 if isinstance(p, tuple):
5499 self.__dict__.update(d)
5500 return self._set_from_binary(p)
5502 __swig_destroy__ = _IMP_algebra.delete_GridIndex2D
5505 _IMP_algebra.GridIndex2D_swigregister(GridIndex2D)
5506 class GridIndex3D(IMP._Value):
5507 r"""Proxy of C++ IMP::algebra::GridIndexD< 3 > class."""
5509 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5511 def __init__(self, *args):
5513 __init__(GridIndex3D self) -> GridIndex3D
5514 __init__(GridIndex3D self, int x) -> GridIndex3D
5515 __init__(GridIndex3D self, int x, int y) -> GridIndex3D
5516 __init__(GridIndex3D self, int x, int y, int z) -> GridIndex3D
5517 __init__(GridIndex3D self, int i, int j, int k, int l) -> GridIndex3D
5518 __init__(GridIndex3D self, int i, int j, int k, int l, int m) -> GridIndex3D
5519 __init__(GridIndex3D self, int i, int j, int k, int l, int m, int n) -> GridIndex3D
5521 _IMP_algebra.GridIndex3D_swiginit(self, _IMP_algebra.new_GridIndex3D(*args))
5523 def get_dimension(self):
5524 r"""get_dimension(GridIndex3D self) -> unsigned int"""
5525 return _IMP_algebra.GridIndex3D_get_dimension(self)
5527 def __getitem__(self, i):
5528 r"""__getitem__(GridIndex3D self, unsigned int i) -> int const &"""
5529 return _IMP_algebra.GridIndex3D___getitem__(self, i)
5531 def show(self, *args):
5532 r"""show(GridIndex3D self, _ostream out=std::cout)"""
5533 return _IMP_algebra.GridIndex3D_show(self, *args)
5536 r"""__len__(GridIndex3D self) -> unsigned int"""
5537 return _IMP_algebra.GridIndex3D___len__(self)
5539 def __cmp__(self, o):
5540 r"""__cmp__(GridIndex3D self, GridIndex3D o) -> int"""
5541 return _IMP_algebra.GridIndex3D___cmp__(self, o)
5543 def __eq__(self, o):
5544 r"""__eq__(GridIndex3D self, GridIndex3D o) -> bool"""
5545 return _IMP_algebra.GridIndex3D___eq__(self, o)
5547 def __ne__(self, o):
5548 r"""__ne__(GridIndex3D self, GridIndex3D o) -> bool"""
5549 return _IMP_algebra.GridIndex3D___ne__(self, o)
5551 def __lt__(self, o):
5552 r"""__lt__(GridIndex3D self, GridIndex3D o) -> bool"""
5553 return _IMP_algebra.GridIndex3D___lt__(self, o)
5555 def __gt__(self, o):
5556 r"""__gt__(GridIndex3D self, GridIndex3D o) -> bool"""
5557 return _IMP_algebra.GridIndex3D___gt__(self, o)
5559 def __ge__(self, o):
5560 r"""__ge__(GridIndex3D self, GridIndex3D o) -> bool"""
5561 return _IMP_algebra.GridIndex3D___ge__(self, o)
5563 def __le__(self, o):
5564 r"""__le__(GridIndex3D self, GridIndex3D o) -> bool"""
5565 return _IMP_algebra.GridIndex3D___le__(self, o)
5568 r"""__hash__(GridIndex3D self) -> std::size_t"""
5569 return _IMP_algebra.GridIndex3D___hash__(self)
5572 r"""__str__(GridIndex3D self) -> std::string"""
5573 return _IMP_algebra.GridIndex3D___str__(self)
5576 r"""__repr__(GridIndex3D self) -> std::string"""
5577 return _IMP_algebra.GridIndex3D___repr__(self)
5579 def _get_as_binary(self):
5580 r"""_get_as_binary(GridIndex3D self) -> PyObject *"""
5581 return _IMP_algebra.GridIndex3D__get_as_binary(self)
5583 def _set_from_binary(self, p):
5584 r"""_set_from_binary(GridIndex3D self, PyObject * p)"""
5585 return _IMP_algebra.GridIndex3D__set_from_binary(self, p)
5587 def __getstate__(self):
5588 p = self._get_as_binary()
5589 if len(self.__dict__) > 1:
5590 d = self.__dict__.copy()
5595 def __setstate__(self, p):
5596 if not hasattr(self,
'this'):
5598 if isinstance(p, tuple):
5600 self.__dict__.update(d)
5601 return self._set_from_binary(p)
5603 __swig_destroy__ = _IMP_algebra.delete_GridIndex3D
5606 _IMP_algebra.GridIndex3D_swigregister(GridIndex3D)
5607 class GridIndex4D(IMP._Value):
5608 r"""Proxy of C++ IMP::algebra::GridIndexD< 4 > class."""
5610 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5612 def __init__(self, *args):
5614 __init__(GridIndex4D self) -> GridIndex4D
5615 __init__(GridIndex4D self, int x) -> GridIndex4D
5616 __init__(GridIndex4D self, int x, int y) -> GridIndex4D
5617 __init__(GridIndex4D self, int x, int y, int z) -> GridIndex4D
5618 __init__(GridIndex4D self, int i, int j, int k, int l) -> GridIndex4D
5619 __init__(GridIndex4D self, int i, int j, int k, int l, int m) -> GridIndex4D
5620 __init__(GridIndex4D self, int i, int j, int k, int l, int m, int n) -> GridIndex4D
5622 _IMP_algebra.GridIndex4D_swiginit(self, _IMP_algebra.new_GridIndex4D(*args))
5624 def get_dimension(self):
5625 r"""get_dimension(GridIndex4D self) -> unsigned int"""
5626 return _IMP_algebra.GridIndex4D_get_dimension(self)
5628 def __getitem__(self, i):
5629 r"""__getitem__(GridIndex4D self, unsigned int i) -> int const &"""
5630 return _IMP_algebra.GridIndex4D___getitem__(self, i)
5632 def show(self, *args):
5633 r"""show(GridIndex4D self, _ostream out=std::cout)"""
5634 return _IMP_algebra.GridIndex4D_show(self, *args)
5637 r"""__len__(GridIndex4D self) -> unsigned int"""
5638 return _IMP_algebra.GridIndex4D___len__(self)
5640 def __cmp__(self, o):
5641 r"""__cmp__(GridIndex4D self, GridIndex4D o) -> int"""
5642 return _IMP_algebra.GridIndex4D___cmp__(self, o)
5644 def __eq__(self, o):
5645 r"""__eq__(GridIndex4D self, GridIndex4D o) -> bool"""
5646 return _IMP_algebra.GridIndex4D___eq__(self, o)
5648 def __ne__(self, o):
5649 r"""__ne__(GridIndex4D self, GridIndex4D o) -> bool"""
5650 return _IMP_algebra.GridIndex4D___ne__(self, o)
5652 def __lt__(self, o):
5653 r"""__lt__(GridIndex4D self, GridIndex4D o) -> bool"""
5654 return _IMP_algebra.GridIndex4D___lt__(self, o)
5656 def __gt__(self, o):
5657 r"""__gt__(GridIndex4D self, GridIndex4D o) -> bool"""
5658 return _IMP_algebra.GridIndex4D___gt__(self, o)
5660 def __ge__(self, o):
5661 r"""__ge__(GridIndex4D self, GridIndex4D o) -> bool"""
5662 return _IMP_algebra.GridIndex4D___ge__(self, o)
5664 def __le__(self, o):
5665 r"""__le__(GridIndex4D self, GridIndex4D o) -> bool"""
5666 return _IMP_algebra.GridIndex4D___le__(self, o)
5669 r"""__hash__(GridIndex4D self) -> std::size_t"""
5670 return _IMP_algebra.GridIndex4D___hash__(self)
5673 r"""__str__(GridIndex4D self) -> std::string"""
5674 return _IMP_algebra.GridIndex4D___str__(self)
5677 r"""__repr__(GridIndex4D self) -> std::string"""
5678 return _IMP_algebra.GridIndex4D___repr__(self)
5680 def _get_as_binary(self):
5681 r"""_get_as_binary(GridIndex4D self) -> PyObject *"""
5682 return _IMP_algebra.GridIndex4D__get_as_binary(self)
5684 def _set_from_binary(self, p):
5685 r"""_set_from_binary(GridIndex4D self, PyObject * p)"""
5686 return _IMP_algebra.GridIndex4D__set_from_binary(self, p)
5688 def __getstate__(self):
5689 p = self._get_as_binary()
5690 if len(self.__dict__) > 1:
5691 d = self.__dict__.copy()
5696 def __setstate__(self, p):
5697 if not hasattr(self,
'this'):
5699 if isinstance(p, tuple):
5701 self.__dict__.update(d)
5702 return self._set_from_binary(p)
5704 __swig_destroy__ = _IMP_algebra.delete_GridIndex4D
5707 _IMP_algebra.GridIndex4D_swigregister(GridIndex4D)
5708 class GridIndex5D(IMP._Value):
5709 r"""Proxy of C++ IMP::algebra::GridIndexD< 5 > class."""
5711 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5713 def __init__(self, *args):
5715 __init__(GridIndex5D self) -> GridIndex5D
5716 __init__(GridIndex5D self, int x) -> GridIndex5D
5717 __init__(GridIndex5D self, int x, int y) -> GridIndex5D
5718 __init__(GridIndex5D self, int x, int y, int z) -> GridIndex5D
5719 __init__(GridIndex5D self, int i, int j, int k, int l) -> GridIndex5D
5720 __init__(GridIndex5D self, int i, int j, int k, int l, int m) -> GridIndex5D
5721 __init__(GridIndex5D self, int i, int j, int k, int l, int m, int n) -> GridIndex5D
5723 _IMP_algebra.GridIndex5D_swiginit(self, _IMP_algebra.new_GridIndex5D(*args))
5725 def get_dimension(self):
5726 r"""get_dimension(GridIndex5D self) -> unsigned int"""
5727 return _IMP_algebra.GridIndex5D_get_dimension(self)
5729 def __getitem__(self, i):
5730 r"""__getitem__(GridIndex5D self, unsigned int i) -> int const &"""
5731 return _IMP_algebra.GridIndex5D___getitem__(self, i)
5733 def show(self, *args):
5734 r"""show(GridIndex5D self, _ostream out=std::cout)"""
5735 return _IMP_algebra.GridIndex5D_show(self, *args)
5738 r"""__len__(GridIndex5D self) -> unsigned int"""
5739 return _IMP_algebra.GridIndex5D___len__(self)
5741 def __cmp__(self, o):
5742 r"""__cmp__(GridIndex5D self, GridIndex5D o) -> int"""
5743 return _IMP_algebra.GridIndex5D___cmp__(self, o)
5745 def __eq__(self, o):
5746 r"""__eq__(GridIndex5D self, GridIndex5D o) -> bool"""
5747 return _IMP_algebra.GridIndex5D___eq__(self, o)
5749 def __ne__(self, o):
5750 r"""__ne__(GridIndex5D self, GridIndex5D o) -> bool"""
5751 return _IMP_algebra.GridIndex5D___ne__(self, o)
5753 def __lt__(self, o):
5754 r"""__lt__(GridIndex5D self, GridIndex5D o) -> bool"""
5755 return _IMP_algebra.GridIndex5D___lt__(self, o)
5757 def __gt__(self, o):
5758 r"""__gt__(GridIndex5D self, GridIndex5D o) -> bool"""
5759 return _IMP_algebra.GridIndex5D___gt__(self, o)
5761 def __ge__(self, o):
5762 r"""__ge__(GridIndex5D self, GridIndex5D o) -> bool"""
5763 return _IMP_algebra.GridIndex5D___ge__(self, o)
5765 def __le__(self, o):
5766 r"""__le__(GridIndex5D self, GridIndex5D o) -> bool"""
5767 return _IMP_algebra.GridIndex5D___le__(self, o)
5770 r"""__hash__(GridIndex5D self) -> std::size_t"""
5771 return _IMP_algebra.GridIndex5D___hash__(self)
5774 r"""__str__(GridIndex5D self) -> std::string"""
5775 return _IMP_algebra.GridIndex5D___str__(self)
5778 r"""__repr__(GridIndex5D self) -> std::string"""
5779 return _IMP_algebra.GridIndex5D___repr__(self)
5781 def _get_as_binary(self):
5782 r"""_get_as_binary(GridIndex5D self) -> PyObject *"""
5783 return _IMP_algebra.GridIndex5D__get_as_binary(self)
5785 def _set_from_binary(self, p):
5786 r"""_set_from_binary(GridIndex5D self, PyObject * p)"""
5787 return _IMP_algebra.GridIndex5D__set_from_binary(self, p)
5789 def __getstate__(self):
5790 p = self._get_as_binary()
5791 if len(self.__dict__) > 1:
5792 d = self.__dict__.copy()
5797 def __setstate__(self, p):
5798 if not hasattr(self,
'this'):
5800 if isinstance(p, tuple):
5802 self.__dict__.update(d)
5803 return self._set_from_binary(p)
5805 __swig_destroy__ = _IMP_algebra.delete_GridIndex5D
5808 _IMP_algebra.GridIndex5D_swigregister(GridIndex5D)
5809 class GridIndex6D(IMP._Value):
5810 r"""Proxy of C++ IMP::algebra::GridIndexD< 6 > class."""
5812 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5814 def __init__(self, *args):
5816 __init__(GridIndex6D self) -> GridIndex6D
5817 __init__(GridIndex6D self, int x) -> GridIndex6D
5818 __init__(GridIndex6D self, int x, int y) -> GridIndex6D
5819 __init__(GridIndex6D self, int x, int y, int z) -> GridIndex6D
5820 __init__(GridIndex6D self, int i, int j, int k, int l) -> GridIndex6D
5821 __init__(GridIndex6D self, int i, int j, int k, int l, int m) -> GridIndex6D
5822 __init__(GridIndex6D self, int i, int j, int k, int l, int m, int n) -> GridIndex6D
5824 _IMP_algebra.GridIndex6D_swiginit(self, _IMP_algebra.new_GridIndex6D(*args))
5826 def get_dimension(self):
5827 r"""get_dimension(GridIndex6D self) -> unsigned int"""
5828 return _IMP_algebra.GridIndex6D_get_dimension(self)
5830 def __getitem__(self, i):
5831 r"""__getitem__(GridIndex6D self, unsigned int i) -> int const &"""
5832 return _IMP_algebra.GridIndex6D___getitem__(self, i)
5834 def show(self, *args):
5835 r"""show(GridIndex6D self, _ostream out=std::cout)"""
5836 return _IMP_algebra.GridIndex6D_show(self, *args)
5839 r"""__len__(GridIndex6D self) -> unsigned int"""
5840 return _IMP_algebra.GridIndex6D___len__(self)
5842 def __cmp__(self, o):
5843 r"""__cmp__(GridIndex6D self, GridIndex6D o) -> int"""
5844 return _IMP_algebra.GridIndex6D___cmp__(self, o)
5846 def __eq__(self, o):
5847 r"""__eq__(GridIndex6D self, GridIndex6D o) -> bool"""
5848 return _IMP_algebra.GridIndex6D___eq__(self, o)
5850 def __ne__(self, o):
5851 r"""__ne__(GridIndex6D self, GridIndex6D o) -> bool"""
5852 return _IMP_algebra.GridIndex6D___ne__(self, o)
5854 def __lt__(self, o):
5855 r"""__lt__(GridIndex6D self, GridIndex6D o) -> bool"""
5856 return _IMP_algebra.GridIndex6D___lt__(self, o)
5858 def __gt__(self, o):
5859 r"""__gt__(GridIndex6D self, GridIndex6D o) -> bool"""
5860 return _IMP_algebra.GridIndex6D___gt__(self, o)
5862 def __ge__(self, o):
5863 r"""__ge__(GridIndex6D self, GridIndex6D o) -> bool"""
5864 return _IMP_algebra.GridIndex6D___ge__(self, o)
5866 def __le__(self, o):
5867 r"""__le__(GridIndex6D self, GridIndex6D o) -> bool"""
5868 return _IMP_algebra.GridIndex6D___le__(self, o)
5871 r"""__hash__(GridIndex6D self) -> std::size_t"""
5872 return _IMP_algebra.GridIndex6D___hash__(self)
5875 r"""__str__(GridIndex6D self) -> std::string"""
5876 return _IMP_algebra.GridIndex6D___str__(self)
5879 r"""__repr__(GridIndex6D self) -> std::string"""
5880 return _IMP_algebra.GridIndex6D___repr__(self)
5882 def _get_as_binary(self):
5883 r"""_get_as_binary(GridIndex6D self) -> PyObject *"""
5884 return _IMP_algebra.GridIndex6D__get_as_binary(self)
5886 def _set_from_binary(self, p):
5887 r"""_set_from_binary(GridIndex6D self, PyObject * p)"""
5888 return _IMP_algebra.GridIndex6D__set_from_binary(self, p)
5890 def __getstate__(self):
5891 p = self._get_as_binary()
5892 if len(self.__dict__) > 1:
5893 d = self.__dict__.copy()
5898 def __setstate__(self, p):
5899 if not hasattr(self,
'this'):
5901 if isinstance(p, tuple):
5903 self.__dict__.update(d)
5904 return self._set_from_binary(p)
5906 __swig_destroy__ = _IMP_algebra.delete_GridIndex6D
5909 _IMP_algebra.GridIndex6D_swigregister(GridIndex6D)
5910 class GridIndexKD(IMP._Value):
5911 r"""Proxy of C++ IMP::algebra::GridIndexD< -1 > class."""
5913 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
5915 def __init__(self, *args):
5917 __init__(GridIndexKD self) -> GridIndexKD
5918 __init__(GridIndexKD self, int x) -> GridIndexKD
5919 __init__(GridIndexKD self, int x, int y) -> GridIndexKD
5920 __init__(GridIndexKD self, int x, int y, int z) -> GridIndexKD
5921 __init__(GridIndexKD self, int i, int j, int k, int l) -> GridIndexKD
5922 __init__(GridIndexKD self, int i, int j, int k, int l, int m) -> GridIndexKD
5923 __init__(GridIndexKD self, int i, int j, int k, int l, int m, int n) -> GridIndexKD
5925 _IMP_algebra.GridIndexKD_swiginit(self, _IMP_algebra.new_GridIndexKD(*args))
5927 def get_dimension(self):
5928 r"""get_dimension(GridIndexKD self) -> unsigned int"""
5929 return _IMP_algebra.GridIndexKD_get_dimension(self)
5931 def __getitem__(self, i):
5932 r"""__getitem__(GridIndexKD self, unsigned int i) -> int const &"""
5933 return _IMP_algebra.GridIndexKD___getitem__(self, i)
5935 def show(self, *args):
5936 r"""show(GridIndexKD self, _ostream out=std::cout)"""
5937 return _IMP_algebra.GridIndexKD_show(self, *args)
5940 r"""__len__(GridIndexKD self) -> unsigned int"""
5941 return _IMP_algebra.GridIndexKD___len__(self)
5943 def __cmp__(self, o):
5944 r"""__cmp__(GridIndexKD self, GridIndexKD o) -> int"""
5945 return _IMP_algebra.GridIndexKD___cmp__(self, o)
5947 def __eq__(self, o):
5948 r"""__eq__(GridIndexKD self, GridIndexKD o) -> bool"""
5949 return _IMP_algebra.GridIndexKD___eq__(self, o)
5951 def __ne__(self, o):
5952 r"""__ne__(GridIndexKD self, GridIndexKD o) -> bool"""
5953 return _IMP_algebra.GridIndexKD___ne__(self, o)
5955 def __lt__(self, o):
5956 r"""__lt__(GridIndexKD self, GridIndexKD o) -> bool"""
5957 return _IMP_algebra.GridIndexKD___lt__(self, o)
5959 def __gt__(self, o):
5960 r"""__gt__(GridIndexKD self, GridIndexKD o) -> bool"""
5961 return _IMP_algebra.GridIndexKD___gt__(self, o)
5963 def __ge__(self, o):
5964 r"""__ge__(GridIndexKD self, GridIndexKD o) -> bool"""
5965 return _IMP_algebra.GridIndexKD___ge__(self, o)
5967 def __le__(self, o):
5968 r"""__le__(GridIndexKD self, GridIndexKD o) -> bool"""
5969 return _IMP_algebra.GridIndexKD___le__(self, o)
5972 r"""__hash__(GridIndexKD self) -> std::size_t"""
5973 return _IMP_algebra.GridIndexKD___hash__(self)
5976 r"""__str__(GridIndexKD self) -> std::string"""
5977 return _IMP_algebra.GridIndexKD___str__(self)
5980 r"""__repr__(GridIndexKD self) -> std::string"""
5981 return _IMP_algebra.GridIndexKD___repr__(self)
5983 def _get_as_binary(self):
5984 r"""_get_as_binary(GridIndexKD self) -> PyObject *"""
5985 return _IMP_algebra.GridIndexKD__get_as_binary(self)
5987 def _set_from_binary(self, p):
5988 r"""_set_from_binary(GridIndexKD self, PyObject * p)"""
5989 return _IMP_algebra.GridIndexKD__set_from_binary(self, p)
5991 def __getstate__(self):
5992 p = self._get_as_binary()
5993 if len(self.__dict__) > 1:
5994 d = self.__dict__.copy()
5999 def __setstate__(self, p):
6000 if not hasattr(self,
'this'):
6002 if isinstance(p, tuple):
6004 self.__dict__.update(d)
6005 return self._set_from_binary(p)
6007 __swig_destroy__ = _IMP_algebra.delete_GridIndexKD
6010 _IMP_algebra.GridIndexKD_swigregister(GridIndexKD)
6011 class ExtendedGridIndex1D(IMP._Value):
6012 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 1 > class."""
6014 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6016 def __init__(self, *args):
6018 __init__(ExtendedGridIndex1D self, IMP::Ints vals) -> ExtendedGridIndex1D
6019 __init__(ExtendedGridIndex1D self, int x) -> ExtendedGridIndex1D
6020 __init__(ExtendedGridIndex1D self, int x, int y) -> ExtendedGridIndex1D
6021 __init__(ExtendedGridIndex1D self, int x, int y, int z) -> ExtendedGridIndex1D
6022 __init__(ExtendedGridIndex1D self, int i, int j, int k, int l) -> ExtendedGridIndex1D
6023 __init__(ExtendedGridIndex1D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex1D
6024 __init__(ExtendedGridIndex1D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex1D
6025 __init__(ExtendedGridIndex1D self) -> ExtendedGridIndex1D
6027 _IMP_algebra.ExtendedGridIndex1D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex1D(*args))
6029 def get_dimension(self):
6030 r"""get_dimension(ExtendedGridIndex1D self) -> unsigned int"""
6031 return _IMP_algebra.ExtendedGridIndex1D_get_dimension(self)
6033 def __cmp__(self, o):
6034 r"""__cmp__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> int"""
6035 return _IMP_algebra.ExtendedGridIndex1D___cmp__(self, o)
6037 def __eq__(self, o):
6038 r"""__eq__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
6039 return _IMP_algebra.ExtendedGridIndex1D___eq__(self, o)
6041 def __ne__(self, o):
6042 r"""__ne__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
6043 return _IMP_algebra.ExtendedGridIndex1D___ne__(self, o)
6045 def __lt__(self, o):
6046 r"""__lt__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
6047 return _IMP_algebra.ExtendedGridIndex1D___lt__(self, o)
6049 def __gt__(self, o):
6050 r"""__gt__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
6051 return _IMP_algebra.ExtendedGridIndex1D___gt__(self, o)
6053 def __ge__(self, o):
6054 r"""__ge__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
6055 return _IMP_algebra.ExtendedGridIndex1D___ge__(self, o)
6057 def __le__(self, o):
6058 r"""__le__(ExtendedGridIndex1D self, ExtendedGridIndex1D o) -> bool"""
6059 return _IMP_algebra.ExtendedGridIndex1D___le__(self, o)
6061 def __setitem__(self, i, v):
6062 r"""__setitem__(ExtendedGridIndex1D self, unsigned int i, int const & v)"""
6063 return _IMP_algebra.ExtendedGridIndex1D___setitem__(self, i, v)
6065 def __getitem__(self, i):
6066 r"""__getitem__(ExtendedGridIndex1D self, unsigned int i) -> int const &"""
6067 return _IMP_algebra.ExtendedGridIndex1D___getitem__(self, i)
6069 def show(self, *args):
6070 r"""show(ExtendedGridIndex1D self, _ostream out=std::cout)"""
6071 return _IMP_algebra.ExtendedGridIndex1D_show(self, *args)
6074 r"""__len__(ExtendedGridIndex1D self) -> unsigned int"""
6075 return _IMP_algebra.ExtendedGridIndex1D___len__(self)
6078 r"""__hash__(ExtendedGridIndex1D self) -> std::size_t"""
6079 return _IMP_algebra.ExtendedGridIndex1D___hash__(self)
6081 def get_uniform_offset(self, ii):
6082 r"""get_uniform_offset(ExtendedGridIndex1D self, int ii) -> ExtendedGridIndex1D"""
6083 return _IMP_algebra.ExtendedGridIndex1D_get_uniform_offset(self, ii)
6085 def get_offset(self, i, j, k):
6086 r"""get_offset(ExtendedGridIndex1D self, int i, int j, int k) -> ExtendedGridIndex1D"""
6087 return _IMP_algebra.ExtendedGridIndex1D_get_offset(self, i, j, k)
6090 r"""__str__(ExtendedGridIndex1D self) -> std::string"""
6091 return _IMP_algebra.ExtendedGridIndex1D___str__(self)
6094 r"""__repr__(ExtendedGridIndex1D self) -> std::string"""
6095 return _IMP_algebra.ExtendedGridIndex1D___repr__(self)
6097 def _get_as_binary(self):
6098 r"""_get_as_binary(ExtendedGridIndex1D self) -> PyObject *"""
6099 return _IMP_algebra.ExtendedGridIndex1D__get_as_binary(self)
6101 def _set_from_binary(self, p):
6102 r"""_set_from_binary(ExtendedGridIndex1D self, PyObject * p)"""
6103 return _IMP_algebra.ExtendedGridIndex1D__set_from_binary(self, p)
6105 def __getstate__(self):
6106 p = self._get_as_binary()
6107 if len(self.__dict__) > 1:
6108 d = self.__dict__.copy()
6113 def __setstate__(self, p):
6114 if not hasattr(self,
'this'):
6116 if isinstance(p, tuple):
6118 self.__dict__.update(d)
6119 return self._set_from_binary(p)
6121 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex1D
6124 _IMP_algebra.ExtendedGridIndex1D_swigregister(ExtendedGridIndex1D)
6125 class ExtendedGridIndex2D(IMP._Value):
6126 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 2 > class."""
6128 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6130 def __init__(self, *args):
6132 __init__(ExtendedGridIndex2D self, IMP::Ints vals) -> ExtendedGridIndex2D
6133 __init__(ExtendedGridIndex2D self, int x) -> ExtendedGridIndex2D
6134 __init__(ExtendedGridIndex2D self, int x, int y) -> ExtendedGridIndex2D
6135 __init__(ExtendedGridIndex2D self, int x, int y, int z) -> ExtendedGridIndex2D
6136 __init__(ExtendedGridIndex2D self, int i, int j, int k, int l) -> ExtendedGridIndex2D
6137 __init__(ExtendedGridIndex2D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex2D
6138 __init__(ExtendedGridIndex2D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex2D
6139 __init__(ExtendedGridIndex2D self) -> ExtendedGridIndex2D
6141 _IMP_algebra.ExtendedGridIndex2D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex2D(*args))
6143 def get_dimension(self):
6144 r"""get_dimension(ExtendedGridIndex2D self) -> unsigned int"""
6145 return _IMP_algebra.ExtendedGridIndex2D_get_dimension(self)
6147 def __cmp__(self, o):
6148 r"""__cmp__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> int"""
6149 return _IMP_algebra.ExtendedGridIndex2D___cmp__(self, o)
6151 def __eq__(self, o):
6152 r"""__eq__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
6153 return _IMP_algebra.ExtendedGridIndex2D___eq__(self, o)
6155 def __ne__(self, o):
6156 r"""__ne__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
6157 return _IMP_algebra.ExtendedGridIndex2D___ne__(self, o)
6159 def __lt__(self, o):
6160 r"""__lt__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
6161 return _IMP_algebra.ExtendedGridIndex2D___lt__(self, o)
6163 def __gt__(self, o):
6164 r"""__gt__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
6165 return _IMP_algebra.ExtendedGridIndex2D___gt__(self, o)
6167 def __ge__(self, o):
6168 r"""__ge__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
6169 return _IMP_algebra.ExtendedGridIndex2D___ge__(self, o)
6171 def __le__(self, o):
6172 r"""__le__(ExtendedGridIndex2D self, ExtendedGridIndex2D o) -> bool"""
6173 return _IMP_algebra.ExtendedGridIndex2D___le__(self, o)
6175 def __setitem__(self, i, v):
6176 r"""__setitem__(ExtendedGridIndex2D self, unsigned int i, int const & v)"""
6177 return _IMP_algebra.ExtendedGridIndex2D___setitem__(self, i, v)
6179 def __getitem__(self, i):
6180 r"""__getitem__(ExtendedGridIndex2D self, unsigned int i) -> int const &"""
6181 return _IMP_algebra.ExtendedGridIndex2D___getitem__(self, i)
6183 def show(self, *args):
6184 r"""show(ExtendedGridIndex2D self, _ostream out=std::cout)"""
6185 return _IMP_algebra.ExtendedGridIndex2D_show(self, *args)
6188 r"""__len__(ExtendedGridIndex2D self) -> unsigned int"""
6189 return _IMP_algebra.ExtendedGridIndex2D___len__(self)
6192 r"""__hash__(ExtendedGridIndex2D self) -> std::size_t"""
6193 return _IMP_algebra.ExtendedGridIndex2D___hash__(self)
6195 def get_uniform_offset(self, ii):
6196 r"""get_uniform_offset(ExtendedGridIndex2D self, int ii) -> ExtendedGridIndex2D"""
6197 return _IMP_algebra.ExtendedGridIndex2D_get_uniform_offset(self, ii)
6199 def get_offset(self, i, j, k):
6200 r"""get_offset(ExtendedGridIndex2D self, int i, int j, int k) -> ExtendedGridIndex2D"""
6201 return _IMP_algebra.ExtendedGridIndex2D_get_offset(self, i, j, k)
6204 r"""__str__(ExtendedGridIndex2D self) -> std::string"""
6205 return _IMP_algebra.ExtendedGridIndex2D___str__(self)
6208 r"""__repr__(ExtendedGridIndex2D self) -> std::string"""
6209 return _IMP_algebra.ExtendedGridIndex2D___repr__(self)
6211 def _get_as_binary(self):
6212 r"""_get_as_binary(ExtendedGridIndex2D self) -> PyObject *"""
6213 return _IMP_algebra.ExtendedGridIndex2D__get_as_binary(self)
6215 def _set_from_binary(self, p):
6216 r"""_set_from_binary(ExtendedGridIndex2D self, PyObject * p)"""
6217 return _IMP_algebra.ExtendedGridIndex2D__set_from_binary(self, p)
6219 def __getstate__(self):
6220 p = self._get_as_binary()
6221 if len(self.__dict__) > 1:
6222 d = self.__dict__.copy()
6227 def __setstate__(self, p):
6228 if not hasattr(self,
'this'):
6230 if isinstance(p, tuple):
6232 self.__dict__.update(d)
6233 return self._set_from_binary(p)
6235 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex2D
6238 _IMP_algebra.ExtendedGridIndex2D_swigregister(ExtendedGridIndex2D)
6239 class ExtendedGridIndex3D(IMP._Value):
6240 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 3 > class."""
6242 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6244 def __init__(self, *args):
6246 __init__(ExtendedGridIndex3D self, IMP::Ints vals) -> ExtendedGridIndex3D
6247 __init__(ExtendedGridIndex3D self, int x) -> ExtendedGridIndex3D
6248 __init__(ExtendedGridIndex3D self, int x, int y) -> ExtendedGridIndex3D
6249 __init__(ExtendedGridIndex3D self, int x, int y, int z) -> ExtendedGridIndex3D
6250 __init__(ExtendedGridIndex3D self, int i, int j, int k, int l) -> ExtendedGridIndex3D
6251 __init__(ExtendedGridIndex3D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex3D
6252 __init__(ExtendedGridIndex3D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex3D
6253 __init__(ExtendedGridIndex3D self) -> ExtendedGridIndex3D
6255 _IMP_algebra.ExtendedGridIndex3D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex3D(*args))
6257 def get_dimension(self):
6258 r"""get_dimension(ExtendedGridIndex3D self) -> unsigned int"""
6259 return _IMP_algebra.ExtendedGridIndex3D_get_dimension(self)
6261 def __cmp__(self, o):
6262 r"""__cmp__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> int"""
6263 return _IMP_algebra.ExtendedGridIndex3D___cmp__(self, o)
6265 def __eq__(self, o):
6266 r"""__eq__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
6267 return _IMP_algebra.ExtendedGridIndex3D___eq__(self, o)
6269 def __ne__(self, o):
6270 r"""__ne__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
6271 return _IMP_algebra.ExtendedGridIndex3D___ne__(self, o)
6273 def __lt__(self, o):
6274 r"""__lt__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
6275 return _IMP_algebra.ExtendedGridIndex3D___lt__(self, o)
6277 def __gt__(self, o):
6278 r"""__gt__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
6279 return _IMP_algebra.ExtendedGridIndex3D___gt__(self, o)
6281 def __ge__(self, o):
6282 r"""__ge__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
6283 return _IMP_algebra.ExtendedGridIndex3D___ge__(self, o)
6285 def __le__(self, o):
6286 r"""__le__(ExtendedGridIndex3D self, ExtendedGridIndex3D o) -> bool"""
6287 return _IMP_algebra.ExtendedGridIndex3D___le__(self, o)
6289 def __setitem__(self, i, v):
6290 r"""__setitem__(ExtendedGridIndex3D self, unsigned int i, int const & v)"""
6291 return _IMP_algebra.ExtendedGridIndex3D___setitem__(self, i, v)
6293 def __getitem__(self, i):
6294 r"""__getitem__(ExtendedGridIndex3D self, unsigned int i) -> int const &"""
6295 return _IMP_algebra.ExtendedGridIndex3D___getitem__(self, i)
6297 def show(self, *args):
6298 r"""show(ExtendedGridIndex3D self, _ostream out=std::cout)"""
6299 return _IMP_algebra.ExtendedGridIndex3D_show(self, *args)
6302 r"""__len__(ExtendedGridIndex3D self) -> unsigned int"""
6303 return _IMP_algebra.ExtendedGridIndex3D___len__(self)
6306 r"""__hash__(ExtendedGridIndex3D self) -> std::size_t"""
6307 return _IMP_algebra.ExtendedGridIndex3D___hash__(self)
6309 def get_uniform_offset(self, ii):
6310 r"""get_uniform_offset(ExtendedGridIndex3D self, int ii) -> ExtendedGridIndex3D"""
6311 return _IMP_algebra.ExtendedGridIndex3D_get_uniform_offset(self, ii)
6313 def get_offset(self, i, j, k):
6314 r"""get_offset(ExtendedGridIndex3D self, int i, int j, int k) -> ExtendedGridIndex3D"""
6315 return _IMP_algebra.ExtendedGridIndex3D_get_offset(self, i, j, k)
6318 r"""__str__(ExtendedGridIndex3D self) -> std::string"""
6319 return _IMP_algebra.ExtendedGridIndex3D___str__(self)
6322 r"""__repr__(ExtendedGridIndex3D self) -> std::string"""
6323 return _IMP_algebra.ExtendedGridIndex3D___repr__(self)
6325 def _get_as_binary(self):
6326 r"""_get_as_binary(ExtendedGridIndex3D self) -> PyObject *"""
6327 return _IMP_algebra.ExtendedGridIndex3D__get_as_binary(self)
6329 def _set_from_binary(self, p):
6330 r"""_set_from_binary(ExtendedGridIndex3D self, PyObject * p)"""
6331 return _IMP_algebra.ExtendedGridIndex3D__set_from_binary(self, p)
6333 def __getstate__(self):
6334 p = self._get_as_binary()
6335 if len(self.__dict__) > 1:
6336 d = self.__dict__.copy()
6341 def __setstate__(self, p):
6342 if not hasattr(self,
'this'):
6344 if isinstance(p, tuple):
6346 self.__dict__.update(d)
6347 return self._set_from_binary(p)
6349 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex3D
6352 _IMP_algebra.ExtendedGridIndex3D_swigregister(ExtendedGridIndex3D)
6353 class ExtendedGridIndex4D(IMP._Value):
6354 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 4 > class."""
6356 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6358 def __init__(self, *args):
6360 __init__(ExtendedGridIndex4D self, IMP::Ints vals) -> ExtendedGridIndex4D
6361 __init__(ExtendedGridIndex4D self, int x) -> ExtendedGridIndex4D
6362 __init__(ExtendedGridIndex4D self, int x, int y) -> ExtendedGridIndex4D
6363 __init__(ExtendedGridIndex4D self, int x, int y, int z) -> ExtendedGridIndex4D
6364 __init__(ExtendedGridIndex4D self, int i, int j, int k, int l) -> ExtendedGridIndex4D
6365 __init__(ExtendedGridIndex4D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex4D
6366 __init__(ExtendedGridIndex4D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex4D
6367 __init__(ExtendedGridIndex4D self) -> ExtendedGridIndex4D
6369 _IMP_algebra.ExtendedGridIndex4D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex4D(*args))
6371 def get_dimension(self):
6372 r"""get_dimension(ExtendedGridIndex4D self) -> unsigned int"""
6373 return _IMP_algebra.ExtendedGridIndex4D_get_dimension(self)
6375 def __cmp__(self, o):
6376 r"""__cmp__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> int"""
6377 return _IMP_algebra.ExtendedGridIndex4D___cmp__(self, o)
6379 def __eq__(self, o):
6380 r"""__eq__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
6381 return _IMP_algebra.ExtendedGridIndex4D___eq__(self, o)
6383 def __ne__(self, o):
6384 r"""__ne__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
6385 return _IMP_algebra.ExtendedGridIndex4D___ne__(self, o)
6387 def __lt__(self, o):
6388 r"""__lt__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
6389 return _IMP_algebra.ExtendedGridIndex4D___lt__(self, o)
6391 def __gt__(self, o):
6392 r"""__gt__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
6393 return _IMP_algebra.ExtendedGridIndex4D___gt__(self, o)
6395 def __ge__(self, o):
6396 r"""__ge__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
6397 return _IMP_algebra.ExtendedGridIndex4D___ge__(self, o)
6399 def __le__(self, o):
6400 r"""__le__(ExtendedGridIndex4D self, ExtendedGridIndex4D o) -> bool"""
6401 return _IMP_algebra.ExtendedGridIndex4D___le__(self, o)
6403 def __setitem__(self, i, v):
6404 r"""__setitem__(ExtendedGridIndex4D self, unsigned int i, int const & v)"""
6405 return _IMP_algebra.ExtendedGridIndex4D___setitem__(self, i, v)
6407 def __getitem__(self, i):
6408 r"""__getitem__(ExtendedGridIndex4D self, unsigned int i) -> int const &"""
6409 return _IMP_algebra.ExtendedGridIndex4D___getitem__(self, i)
6411 def show(self, *args):
6412 r"""show(ExtendedGridIndex4D self, _ostream out=std::cout)"""
6413 return _IMP_algebra.ExtendedGridIndex4D_show(self, *args)
6416 r"""__len__(ExtendedGridIndex4D self) -> unsigned int"""
6417 return _IMP_algebra.ExtendedGridIndex4D___len__(self)
6420 r"""__hash__(ExtendedGridIndex4D self) -> std::size_t"""
6421 return _IMP_algebra.ExtendedGridIndex4D___hash__(self)
6423 def get_uniform_offset(self, ii):
6424 r"""get_uniform_offset(ExtendedGridIndex4D self, int ii) -> ExtendedGridIndex4D"""
6425 return _IMP_algebra.ExtendedGridIndex4D_get_uniform_offset(self, ii)
6427 def get_offset(self, i, j, k):
6428 r"""get_offset(ExtendedGridIndex4D self, int i, int j, int k) -> ExtendedGridIndex4D"""
6429 return _IMP_algebra.ExtendedGridIndex4D_get_offset(self, i, j, k)
6432 r"""__str__(ExtendedGridIndex4D self) -> std::string"""
6433 return _IMP_algebra.ExtendedGridIndex4D___str__(self)
6436 r"""__repr__(ExtendedGridIndex4D self) -> std::string"""
6437 return _IMP_algebra.ExtendedGridIndex4D___repr__(self)
6439 def _get_as_binary(self):
6440 r"""_get_as_binary(ExtendedGridIndex4D self) -> PyObject *"""
6441 return _IMP_algebra.ExtendedGridIndex4D__get_as_binary(self)
6443 def _set_from_binary(self, p):
6444 r"""_set_from_binary(ExtendedGridIndex4D self, PyObject * p)"""
6445 return _IMP_algebra.ExtendedGridIndex4D__set_from_binary(self, p)
6447 def __getstate__(self):
6448 p = self._get_as_binary()
6449 if len(self.__dict__) > 1:
6450 d = self.__dict__.copy()
6455 def __setstate__(self, p):
6456 if not hasattr(self,
'this'):
6458 if isinstance(p, tuple):
6460 self.__dict__.update(d)
6461 return self._set_from_binary(p)
6463 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex4D
6466 _IMP_algebra.ExtendedGridIndex4D_swigregister(ExtendedGridIndex4D)
6467 class ExtendedGridIndex5D(IMP._Value):
6468 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 5 > class."""
6470 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6472 def __init__(self, *args):
6474 __init__(ExtendedGridIndex5D self, IMP::Ints vals) -> ExtendedGridIndex5D
6475 __init__(ExtendedGridIndex5D self, int x) -> ExtendedGridIndex5D
6476 __init__(ExtendedGridIndex5D self, int x, int y) -> ExtendedGridIndex5D
6477 __init__(ExtendedGridIndex5D self, int x, int y, int z) -> ExtendedGridIndex5D
6478 __init__(ExtendedGridIndex5D self, int i, int j, int k, int l) -> ExtendedGridIndex5D
6479 __init__(ExtendedGridIndex5D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex5D
6480 __init__(ExtendedGridIndex5D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex5D
6481 __init__(ExtendedGridIndex5D self) -> ExtendedGridIndex5D
6483 _IMP_algebra.ExtendedGridIndex5D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex5D(*args))
6485 def get_dimension(self):
6486 r"""get_dimension(ExtendedGridIndex5D self) -> unsigned int"""
6487 return _IMP_algebra.ExtendedGridIndex5D_get_dimension(self)
6489 def __cmp__(self, o):
6490 r"""__cmp__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> int"""
6491 return _IMP_algebra.ExtendedGridIndex5D___cmp__(self, o)
6493 def __eq__(self, o):
6494 r"""__eq__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
6495 return _IMP_algebra.ExtendedGridIndex5D___eq__(self, o)
6497 def __ne__(self, o):
6498 r"""__ne__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
6499 return _IMP_algebra.ExtendedGridIndex5D___ne__(self, o)
6501 def __lt__(self, o):
6502 r"""__lt__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
6503 return _IMP_algebra.ExtendedGridIndex5D___lt__(self, o)
6505 def __gt__(self, o):
6506 r"""__gt__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
6507 return _IMP_algebra.ExtendedGridIndex5D___gt__(self, o)
6509 def __ge__(self, o):
6510 r"""__ge__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
6511 return _IMP_algebra.ExtendedGridIndex5D___ge__(self, o)
6513 def __le__(self, o):
6514 r"""__le__(ExtendedGridIndex5D self, ExtendedGridIndex5D o) -> bool"""
6515 return _IMP_algebra.ExtendedGridIndex5D___le__(self, o)
6517 def __setitem__(self, i, v):
6518 r"""__setitem__(ExtendedGridIndex5D self, unsigned int i, int const & v)"""
6519 return _IMP_algebra.ExtendedGridIndex5D___setitem__(self, i, v)
6521 def __getitem__(self, i):
6522 r"""__getitem__(ExtendedGridIndex5D self, unsigned int i) -> int const &"""
6523 return _IMP_algebra.ExtendedGridIndex5D___getitem__(self, i)
6525 def show(self, *args):
6526 r"""show(ExtendedGridIndex5D self, _ostream out=std::cout)"""
6527 return _IMP_algebra.ExtendedGridIndex5D_show(self, *args)
6530 r"""__len__(ExtendedGridIndex5D self) -> unsigned int"""
6531 return _IMP_algebra.ExtendedGridIndex5D___len__(self)
6534 r"""__hash__(ExtendedGridIndex5D self) -> std::size_t"""
6535 return _IMP_algebra.ExtendedGridIndex5D___hash__(self)
6537 def get_uniform_offset(self, ii):
6538 r"""get_uniform_offset(ExtendedGridIndex5D self, int ii) -> ExtendedGridIndex5D"""
6539 return _IMP_algebra.ExtendedGridIndex5D_get_uniform_offset(self, ii)
6541 def get_offset(self, i, j, k):
6542 r"""get_offset(ExtendedGridIndex5D self, int i, int j, int k) -> ExtendedGridIndex5D"""
6543 return _IMP_algebra.ExtendedGridIndex5D_get_offset(self, i, j, k)
6546 r"""__str__(ExtendedGridIndex5D self) -> std::string"""
6547 return _IMP_algebra.ExtendedGridIndex5D___str__(self)
6550 r"""__repr__(ExtendedGridIndex5D self) -> std::string"""
6551 return _IMP_algebra.ExtendedGridIndex5D___repr__(self)
6553 def _get_as_binary(self):
6554 r"""_get_as_binary(ExtendedGridIndex5D self) -> PyObject *"""
6555 return _IMP_algebra.ExtendedGridIndex5D__get_as_binary(self)
6557 def _set_from_binary(self, p):
6558 r"""_set_from_binary(ExtendedGridIndex5D self, PyObject * p)"""
6559 return _IMP_algebra.ExtendedGridIndex5D__set_from_binary(self, p)
6561 def __getstate__(self):
6562 p = self._get_as_binary()
6563 if len(self.__dict__) > 1:
6564 d = self.__dict__.copy()
6569 def __setstate__(self, p):
6570 if not hasattr(self,
'this'):
6572 if isinstance(p, tuple):
6574 self.__dict__.update(d)
6575 return self._set_from_binary(p)
6577 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex5D
6580 _IMP_algebra.ExtendedGridIndex5D_swigregister(ExtendedGridIndex5D)
6581 class ExtendedGridIndex6D(IMP._Value):
6582 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< 6 > class."""
6584 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6586 def __init__(self, *args):
6588 __init__(ExtendedGridIndex6D self, IMP::Ints vals) -> ExtendedGridIndex6D
6589 __init__(ExtendedGridIndex6D self, int x) -> ExtendedGridIndex6D
6590 __init__(ExtendedGridIndex6D self, int x, int y) -> ExtendedGridIndex6D
6591 __init__(ExtendedGridIndex6D self, int x, int y, int z) -> ExtendedGridIndex6D
6592 __init__(ExtendedGridIndex6D self, int i, int j, int k, int l) -> ExtendedGridIndex6D
6593 __init__(ExtendedGridIndex6D self, int i, int j, int k, int l, int m) -> ExtendedGridIndex6D
6594 __init__(ExtendedGridIndex6D self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndex6D
6595 __init__(ExtendedGridIndex6D self) -> ExtendedGridIndex6D
6597 _IMP_algebra.ExtendedGridIndex6D_swiginit(self, _IMP_algebra.new_ExtendedGridIndex6D(*args))
6599 def get_dimension(self):
6600 r"""get_dimension(ExtendedGridIndex6D self) -> unsigned int"""
6601 return _IMP_algebra.ExtendedGridIndex6D_get_dimension(self)
6603 def __cmp__(self, o):
6604 r"""__cmp__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> int"""
6605 return _IMP_algebra.ExtendedGridIndex6D___cmp__(self, o)
6607 def __eq__(self, o):
6608 r"""__eq__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
6609 return _IMP_algebra.ExtendedGridIndex6D___eq__(self, o)
6611 def __ne__(self, o):
6612 r"""__ne__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
6613 return _IMP_algebra.ExtendedGridIndex6D___ne__(self, o)
6615 def __lt__(self, o):
6616 r"""__lt__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
6617 return _IMP_algebra.ExtendedGridIndex6D___lt__(self, o)
6619 def __gt__(self, o):
6620 r"""__gt__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
6621 return _IMP_algebra.ExtendedGridIndex6D___gt__(self, o)
6623 def __ge__(self, o):
6624 r"""__ge__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
6625 return _IMP_algebra.ExtendedGridIndex6D___ge__(self, o)
6627 def __le__(self, o):
6628 r"""__le__(ExtendedGridIndex6D self, ExtendedGridIndex6D o) -> bool"""
6629 return _IMP_algebra.ExtendedGridIndex6D___le__(self, o)
6631 def __setitem__(self, i, v):
6632 r"""__setitem__(ExtendedGridIndex6D self, unsigned int i, int const & v)"""
6633 return _IMP_algebra.ExtendedGridIndex6D___setitem__(self, i, v)
6635 def __getitem__(self, i):
6636 r"""__getitem__(ExtendedGridIndex6D self, unsigned int i) -> int const &"""
6637 return _IMP_algebra.ExtendedGridIndex6D___getitem__(self, i)
6639 def show(self, *args):
6640 r"""show(ExtendedGridIndex6D self, _ostream out=std::cout)"""
6641 return _IMP_algebra.ExtendedGridIndex6D_show(self, *args)
6644 r"""__len__(ExtendedGridIndex6D self) -> unsigned int"""
6645 return _IMP_algebra.ExtendedGridIndex6D___len__(self)
6648 r"""__hash__(ExtendedGridIndex6D self) -> std::size_t"""
6649 return _IMP_algebra.ExtendedGridIndex6D___hash__(self)
6651 def get_uniform_offset(self, ii):
6652 r"""get_uniform_offset(ExtendedGridIndex6D self, int ii) -> ExtendedGridIndex6D"""
6653 return _IMP_algebra.ExtendedGridIndex6D_get_uniform_offset(self, ii)
6655 def get_offset(self, i, j, k):
6656 r"""get_offset(ExtendedGridIndex6D self, int i, int j, int k) -> ExtendedGridIndex6D"""
6657 return _IMP_algebra.ExtendedGridIndex6D_get_offset(self, i, j, k)
6660 r"""__str__(ExtendedGridIndex6D self) -> std::string"""
6661 return _IMP_algebra.ExtendedGridIndex6D___str__(self)
6664 r"""__repr__(ExtendedGridIndex6D self) -> std::string"""
6665 return _IMP_algebra.ExtendedGridIndex6D___repr__(self)
6667 def _get_as_binary(self):
6668 r"""_get_as_binary(ExtendedGridIndex6D self) -> PyObject *"""
6669 return _IMP_algebra.ExtendedGridIndex6D__get_as_binary(self)
6671 def _set_from_binary(self, p):
6672 r"""_set_from_binary(ExtendedGridIndex6D self, PyObject * p)"""
6673 return _IMP_algebra.ExtendedGridIndex6D__set_from_binary(self, p)
6675 def __getstate__(self):
6676 p = self._get_as_binary()
6677 if len(self.__dict__) > 1:
6678 d = self.__dict__.copy()
6683 def __setstate__(self, p):
6684 if not hasattr(self,
'this'):
6686 if isinstance(p, tuple):
6688 self.__dict__.update(d)
6689 return self._set_from_binary(p)
6691 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndex6D
6694 _IMP_algebra.ExtendedGridIndex6D_swigregister(ExtendedGridIndex6D)
6695 class ExtendedGridIndexKD(IMP._Value):
6696 r"""Proxy of C++ IMP::algebra::ExtendedGridIndexD< -1 > class."""
6698 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6700 def __init__(self, *args):
6702 __init__(ExtendedGridIndexKD self, IMP::Ints vals) -> ExtendedGridIndexKD
6703 __init__(ExtendedGridIndexKD self, int x) -> ExtendedGridIndexKD
6704 __init__(ExtendedGridIndexKD self, int x, int y) -> ExtendedGridIndexKD
6705 __init__(ExtendedGridIndexKD self, int x, int y, int z) -> ExtendedGridIndexKD
6706 __init__(ExtendedGridIndexKD self, int i, int j, int k, int l) -> ExtendedGridIndexKD
6707 __init__(ExtendedGridIndexKD self, int i, int j, int k, int l, int m) -> ExtendedGridIndexKD
6708 __init__(ExtendedGridIndexKD self, int i, int j, int k, int l, int m, int n) -> ExtendedGridIndexKD
6709 __init__(ExtendedGridIndexKD self) -> ExtendedGridIndexKD
6711 _IMP_algebra.ExtendedGridIndexKD_swiginit(self, _IMP_algebra.new_ExtendedGridIndexKD(*args))
6713 def get_dimension(self):
6714 r"""get_dimension(ExtendedGridIndexKD self) -> unsigned int"""
6715 return _IMP_algebra.ExtendedGridIndexKD_get_dimension(self)
6717 def __cmp__(self, o):
6718 r"""__cmp__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> int"""
6719 return _IMP_algebra.ExtendedGridIndexKD___cmp__(self, o)
6721 def __eq__(self, o):
6722 r"""__eq__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
6723 return _IMP_algebra.ExtendedGridIndexKD___eq__(self, o)
6725 def __ne__(self, o):
6726 r"""__ne__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
6727 return _IMP_algebra.ExtendedGridIndexKD___ne__(self, o)
6729 def __lt__(self, o):
6730 r"""__lt__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
6731 return _IMP_algebra.ExtendedGridIndexKD___lt__(self, o)
6733 def __gt__(self, o):
6734 r"""__gt__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
6735 return _IMP_algebra.ExtendedGridIndexKD___gt__(self, o)
6737 def __ge__(self, o):
6738 r"""__ge__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
6739 return _IMP_algebra.ExtendedGridIndexKD___ge__(self, o)
6741 def __le__(self, o):
6742 r"""__le__(ExtendedGridIndexKD self, ExtendedGridIndexKD o) -> bool"""
6743 return _IMP_algebra.ExtendedGridIndexKD___le__(self, o)
6745 def __setitem__(self, i, v):
6746 r"""__setitem__(ExtendedGridIndexKD self, unsigned int i, int const & v)"""
6747 return _IMP_algebra.ExtendedGridIndexKD___setitem__(self, i, v)
6749 def __getitem__(self, i):
6750 r"""__getitem__(ExtendedGridIndexKD self, unsigned int i) -> int const &"""
6751 return _IMP_algebra.ExtendedGridIndexKD___getitem__(self, i)
6753 def show(self, *args):
6754 r"""show(ExtendedGridIndexKD self, _ostream out=std::cout)"""
6755 return _IMP_algebra.ExtendedGridIndexKD_show(self, *args)
6758 r"""__len__(ExtendedGridIndexKD self) -> unsigned int"""
6759 return _IMP_algebra.ExtendedGridIndexKD___len__(self)
6762 r"""__hash__(ExtendedGridIndexKD self) -> std::size_t"""
6763 return _IMP_algebra.ExtendedGridIndexKD___hash__(self)
6765 def get_uniform_offset(self, ii):
6766 r"""get_uniform_offset(ExtendedGridIndexKD self, int ii) -> ExtendedGridIndexKD"""
6767 return _IMP_algebra.ExtendedGridIndexKD_get_uniform_offset(self, ii)
6769 def get_offset(self, i, j, k):
6770 r"""get_offset(ExtendedGridIndexKD self, int i, int j, int k) -> ExtendedGridIndexKD"""
6771 return _IMP_algebra.ExtendedGridIndexKD_get_offset(self, i, j, k)
6774 r"""__str__(ExtendedGridIndexKD self) -> std::string"""
6775 return _IMP_algebra.ExtendedGridIndexKD___str__(self)
6778 r"""__repr__(ExtendedGridIndexKD self) -> std::string"""
6779 return _IMP_algebra.ExtendedGridIndexKD___repr__(self)
6781 def _get_as_binary(self):
6782 r"""_get_as_binary(ExtendedGridIndexKD self) -> PyObject *"""
6783 return _IMP_algebra.ExtendedGridIndexKD__get_as_binary(self)
6785 def _set_from_binary(self, p):
6786 r"""_set_from_binary(ExtendedGridIndexKD self, PyObject * p)"""
6787 return _IMP_algebra.ExtendedGridIndexKD__set_from_binary(self, p)
6789 def __getstate__(self):
6790 p = self._get_as_binary()
6791 if len(self.__dict__) > 1:
6792 d = self.__dict__.copy()
6797 def __setstate__(self, p):
6798 if not hasattr(self,
'this'):
6800 if isinstance(p, tuple):
6802 self.__dict__.update(d)
6803 return self._set_from_binary(p)
6805 __swig_destroy__ = _IMP_algebra.delete_ExtendedGridIndexKD
6808 _IMP_algebra.ExtendedGridIndexKD_swigregister(ExtendedGridIndexKD)
6809 class BoundedGridRange1D(object):
6810 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 1 > class."""
6812 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6815 def get_is_bounded():
6816 r"""get_is_bounded() -> bool"""
6817 return _IMP_algebra.BoundedGridRange1D_get_is_bounded()
6819 def __init__(self, *args):
6821 __init__(BoundedGridRange1D self) -> BoundedGridRange1D
6822 __init__(BoundedGridRange1D self, IMP::Ints const & counts) -> BoundedGridRange1D
6824 _IMP_algebra.BoundedGridRange1D_swiginit(self, _IMP_algebra.new_BoundedGridRange1D(*args))
6826 def get_number_of_voxels(self, *args):
6828 get_number_of_voxels(BoundedGridRange1D self, unsigned int i) -> unsigned int
6829 get_number_of_voxels(BoundedGridRange1D self) -> unsigned int
6831 return _IMP_algebra.BoundedGridRange1D_get_number_of_voxels(self, *args)
6833 def get_end_index(self):
6834 r"""get_end_index(BoundedGridRange1D self) -> ExtendedGridIndex1D"""
6835 return _IMP_algebra.BoundedGridRange1D_get_end_index(self)
6837 def show(self, *args):
6838 r"""show(BoundedGridRange1D self, _ostream out=std::cout)"""
6839 return _IMP_algebra.BoundedGridRange1D_show(self, *args)
6841 def get_all_indexes(self):
6842 r"""get_all_indexes(BoundedGridRange1D self) -> IMP::Vector< IMP::algebra::GridIndexD< 1 > >"""
6843 return _IMP_algebra.BoundedGridRange1D_get_all_indexes(self)
6846 r"""get_indexes(BoundedGridRange1D self, ExtendedGridIndex1D lb, ExtendedGridIndex1D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 1 > >"""
6847 return _IMP_algebra.BoundedGridRange1D_get_indexes(self, lb, ub)
6849 def get_extended_indexes(self, lb, ub):
6850 r"""get_extended_indexes(BoundedGridRange1D self, ExtendedGridIndex1D lb, ExtendedGridIndex1D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 1 > >"""
6851 return _IMP_algebra.BoundedGridRange1D_get_extended_indexes(self, lb, ub)
6854 r"""get_index(BoundedGridRange1D self, ExtendedGridIndex1D v) -> GridIndex1D"""
6855 return _IMP_algebra.BoundedGridRange1D_get_index(self, v)
6857 def get_has_index(self, v):
6858 r"""get_has_index(BoundedGridRange1D self, ExtendedGridIndex1D v) -> bool"""
6859 return _IMP_algebra.BoundedGridRange1D_get_has_index(self, v)
6861 def get_minimum_extended_index(self):
6862 r"""get_minimum_extended_index(BoundedGridRange1D self) -> ExtendedGridIndex1D"""
6863 return _IMP_algebra.BoundedGridRange1D_get_minimum_extended_index(self)
6865 def get_maximum_extended_index(self):
6866 r"""get_maximum_extended_index(BoundedGridRange1D self) -> ExtendedGridIndex1D"""
6867 return _IMP_algebra.BoundedGridRange1D_get_maximum_extended_index(self)
6870 r"""__str__(BoundedGridRange1D self) -> std::string"""
6871 return _IMP_algebra.BoundedGridRange1D___str__(self)
6874 r"""__repr__(BoundedGridRange1D self) -> std::string"""
6875 return _IMP_algebra.BoundedGridRange1D___repr__(self)
6877 def __cmp__(self, arg2):
6878 r"""__cmp__(BoundedGridRange1D self, BoundedGridRange1D arg2) -> int"""
6879 return _IMP_algebra.BoundedGridRange1D___cmp__(self, arg2)
6881 def __eq__(self, arg2):
6882 r"""__eq__(BoundedGridRange1D self, BoundedGridRange1D arg2) -> bool"""
6883 return _IMP_algebra.BoundedGridRange1D___eq__(self, arg2)
6885 def _get_as_binary(self):
6886 r"""_get_as_binary(BoundedGridRange1D self) -> PyObject *"""
6887 return _IMP_algebra.BoundedGridRange1D__get_as_binary(self)
6889 def _set_from_binary(self, p):
6890 r"""_set_from_binary(BoundedGridRange1D self, PyObject * p)"""
6891 return _IMP_algebra.BoundedGridRange1D__set_from_binary(self, p)
6893 def __getstate__(self):
6894 p = self._get_as_binary()
6895 if len(self.__dict__) > 1:
6896 d = self.__dict__.copy()
6901 def __setstate__(self, p):
6902 if not hasattr(self,
'this'):
6904 if isinstance(p, tuple):
6906 self.__dict__.update(d)
6907 return self._set_from_binary(p)
6909 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange1D
6912 _IMP_algebra.BoundedGridRange1D_swigregister(BoundedGridRange1D)
6913 class BoundedGridRange2D(object):
6914 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 2 > class."""
6916 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
6919 def get_is_bounded():
6920 r"""get_is_bounded() -> bool"""
6921 return _IMP_algebra.BoundedGridRange2D_get_is_bounded()
6923 def __init__(self, *args):
6925 __init__(BoundedGridRange2D self) -> BoundedGridRange2D
6926 __init__(BoundedGridRange2D self, IMP::Ints const & counts) -> BoundedGridRange2D
6928 _IMP_algebra.BoundedGridRange2D_swiginit(self, _IMP_algebra.new_BoundedGridRange2D(*args))
6930 def get_number_of_voxels(self, *args):
6932 get_number_of_voxels(BoundedGridRange2D self, unsigned int i) -> unsigned int
6933 get_number_of_voxels(BoundedGridRange2D self) -> unsigned int
6935 return _IMP_algebra.BoundedGridRange2D_get_number_of_voxels(self, *args)
6937 def get_end_index(self):
6938 r"""get_end_index(BoundedGridRange2D self) -> ExtendedGridIndex2D"""
6939 return _IMP_algebra.BoundedGridRange2D_get_end_index(self)
6941 def show(self, *args):
6942 r"""show(BoundedGridRange2D self, _ostream out=std::cout)"""
6943 return _IMP_algebra.BoundedGridRange2D_show(self, *args)
6945 def get_all_indexes(self):
6946 r"""get_all_indexes(BoundedGridRange2D self) -> IMP::Vector< IMP::algebra::GridIndexD< 2 > >"""
6947 return _IMP_algebra.BoundedGridRange2D_get_all_indexes(self)
6950 r"""get_indexes(BoundedGridRange2D self, ExtendedGridIndex2D lb, ExtendedGridIndex2D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 2 > >"""
6951 return _IMP_algebra.BoundedGridRange2D_get_indexes(self, lb, ub)
6953 def get_extended_indexes(self, lb, ub):
6954 r"""get_extended_indexes(BoundedGridRange2D self, ExtendedGridIndex2D lb, ExtendedGridIndex2D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 2 > >"""
6955 return _IMP_algebra.BoundedGridRange2D_get_extended_indexes(self, lb, ub)
6958 r"""get_index(BoundedGridRange2D self, ExtendedGridIndex2D v) -> GridIndex2D"""
6959 return _IMP_algebra.BoundedGridRange2D_get_index(self, v)
6961 def get_has_index(self, v):
6962 r"""get_has_index(BoundedGridRange2D self, ExtendedGridIndex2D v) -> bool"""
6963 return _IMP_algebra.BoundedGridRange2D_get_has_index(self, v)
6965 def get_minimum_extended_index(self):
6966 r"""get_minimum_extended_index(BoundedGridRange2D self) -> ExtendedGridIndex2D"""
6967 return _IMP_algebra.BoundedGridRange2D_get_minimum_extended_index(self)
6969 def get_maximum_extended_index(self):
6970 r"""get_maximum_extended_index(BoundedGridRange2D self) -> ExtendedGridIndex2D"""
6971 return _IMP_algebra.BoundedGridRange2D_get_maximum_extended_index(self)
6974 r"""__str__(BoundedGridRange2D self) -> std::string"""
6975 return _IMP_algebra.BoundedGridRange2D___str__(self)
6978 r"""__repr__(BoundedGridRange2D self) -> std::string"""
6979 return _IMP_algebra.BoundedGridRange2D___repr__(self)
6981 def __cmp__(self, arg2):
6982 r"""__cmp__(BoundedGridRange2D self, BoundedGridRange2D arg2) -> int"""
6983 return _IMP_algebra.BoundedGridRange2D___cmp__(self, arg2)
6985 def __eq__(self, arg2):
6986 r"""__eq__(BoundedGridRange2D self, BoundedGridRange2D arg2) -> bool"""
6987 return _IMP_algebra.BoundedGridRange2D___eq__(self, arg2)
6989 def _get_as_binary(self):
6990 r"""_get_as_binary(BoundedGridRange2D self) -> PyObject *"""
6991 return _IMP_algebra.BoundedGridRange2D__get_as_binary(self)
6993 def _set_from_binary(self, p):
6994 r"""_set_from_binary(BoundedGridRange2D self, PyObject * p)"""
6995 return _IMP_algebra.BoundedGridRange2D__set_from_binary(self, p)
6997 def __getstate__(self):
6998 p = self._get_as_binary()
6999 if len(self.__dict__) > 1:
7000 d = self.__dict__.copy()
7005 def __setstate__(self, p):
7006 if not hasattr(self,
'this'):
7008 if isinstance(p, tuple):
7010 self.__dict__.update(d)
7011 return self._set_from_binary(p)
7013 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange2D
7016 _IMP_algebra.BoundedGridRange2D_swigregister(BoundedGridRange2D)
7017 class BoundedGridRange3D(object):
7018 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 3 > class."""
7020 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7023 def get_is_bounded():
7024 r"""get_is_bounded() -> bool"""
7025 return _IMP_algebra.BoundedGridRange3D_get_is_bounded()
7027 def __init__(self, *args):
7029 __init__(BoundedGridRange3D self) -> BoundedGridRange3D
7030 __init__(BoundedGridRange3D self, IMP::Ints const & counts) -> BoundedGridRange3D
7032 _IMP_algebra.BoundedGridRange3D_swiginit(self, _IMP_algebra.new_BoundedGridRange3D(*args))
7034 def get_number_of_voxels(self, *args):
7036 get_number_of_voxels(BoundedGridRange3D self, unsigned int i) -> unsigned int
7037 get_number_of_voxels(BoundedGridRange3D self) -> unsigned int
7039 return _IMP_algebra.BoundedGridRange3D_get_number_of_voxels(self, *args)
7041 def get_end_index(self):
7042 r"""get_end_index(BoundedGridRange3D self) -> ExtendedGridIndex3D"""
7043 return _IMP_algebra.BoundedGridRange3D_get_end_index(self)
7045 def show(self, *args):
7046 r"""show(BoundedGridRange3D self, _ostream out=std::cout)"""
7047 return _IMP_algebra.BoundedGridRange3D_show(self, *args)
7049 def get_all_indexes(self):
7050 r"""get_all_indexes(BoundedGridRange3D self) -> IMP::Vector< IMP::algebra::GridIndexD< 3 > >"""
7051 return _IMP_algebra.BoundedGridRange3D_get_all_indexes(self)
7054 r"""get_indexes(BoundedGridRange3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 3 > >"""
7055 return _IMP_algebra.BoundedGridRange3D_get_indexes(self, lb, ub)
7057 def get_extended_indexes(self, lb, ub):
7058 r"""get_extended_indexes(BoundedGridRange3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 > >"""
7059 return _IMP_algebra.BoundedGridRange3D_get_extended_indexes(self, lb, ub)
7062 r"""get_index(BoundedGridRange3D self, ExtendedGridIndex3D v) -> GridIndex3D"""
7063 return _IMP_algebra.BoundedGridRange3D_get_index(self, v)
7065 def get_has_index(self, v):
7066 r"""get_has_index(BoundedGridRange3D self, ExtendedGridIndex3D v) -> bool"""
7067 return _IMP_algebra.BoundedGridRange3D_get_has_index(self, v)
7069 def get_minimum_extended_index(self):
7070 r"""get_minimum_extended_index(BoundedGridRange3D self) -> ExtendedGridIndex3D"""
7071 return _IMP_algebra.BoundedGridRange3D_get_minimum_extended_index(self)
7073 def get_maximum_extended_index(self):
7074 r"""get_maximum_extended_index(BoundedGridRange3D self) -> ExtendedGridIndex3D"""
7075 return _IMP_algebra.BoundedGridRange3D_get_maximum_extended_index(self)
7078 r"""__str__(BoundedGridRange3D self) -> std::string"""
7079 return _IMP_algebra.BoundedGridRange3D___str__(self)
7082 r"""__repr__(BoundedGridRange3D self) -> std::string"""
7083 return _IMP_algebra.BoundedGridRange3D___repr__(self)
7085 def __cmp__(self, arg2):
7086 r"""__cmp__(BoundedGridRange3D self, BoundedGridRange3D arg2) -> int"""
7087 return _IMP_algebra.BoundedGridRange3D___cmp__(self, arg2)
7089 def __eq__(self, arg2):
7090 r"""__eq__(BoundedGridRange3D self, BoundedGridRange3D arg2) -> bool"""
7091 return _IMP_algebra.BoundedGridRange3D___eq__(self, arg2)
7093 def _get_as_binary(self):
7094 r"""_get_as_binary(BoundedGridRange3D self) -> PyObject *"""
7095 return _IMP_algebra.BoundedGridRange3D__get_as_binary(self)
7097 def _set_from_binary(self, p):
7098 r"""_set_from_binary(BoundedGridRange3D self, PyObject * p)"""
7099 return _IMP_algebra.BoundedGridRange3D__set_from_binary(self, p)
7101 def __getstate__(self):
7102 p = self._get_as_binary()
7103 if len(self.__dict__) > 1:
7104 d = self.__dict__.copy()
7109 def __setstate__(self, p):
7110 if not hasattr(self,
'this'):
7112 if isinstance(p, tuple):
7114 self.__dict__.update(d)
7115 return self._set_from_binary(p)
7117 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange3D
7120 _IMP_algebra.BoundedGridRange3D_swigregister(BoundedGridRange3D)
7121 class BoundedGridRange4D(object):
7122 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 4 > class."""
7124 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7127 def get_is_bounded():
7128 r"""get_is_bounded() -> bool"""
7129 return _IMP_algebra.BoundedGridRange4D_get_is_bounded()
7131 def __init__(self, *args):
7133 __init__(BoundedGridRange4D self) -> BoundedGridRange4D
7134 __init__(BoundedGridRange4D self, IMP::Ints const & counts) -> BoundedGridRange4D
7136 _IMP_algebra.BoundedGridRange4D_swiginit(self, _IMP_algebra.new_BoundedGridRange4D(*args))
7138 def get_number_of_voxels(self, *args):
7140 get_number_of_voxels(BoundedGridRange4D self, unsigned int i) -> unsigned int
7141 get_number_of_voxels(BoundedGridRange4D self) -> unsigned int
7143 return _IMP_algebra.BoundedGridRange4D_get_number_of_voxels(self, *args)
7145 def get_end_index(self):
7146 r"""get_end_index(BoundedGridRange4D self) -> ExtendedGridIndex4D"""
7147 return _IMP_algebra.BoundedGridRange4D_get_end_index(self)
7149 def show(self, *args):
7150 r"""show(BoundedGridRange4D self, _ostream out=std::cout)"""
7151 return _IMP_algebra.BoundedGridRange4D_show(self, *args)
7153 def get_all_indexes(self):
7154 r"""get_all_indexes(BoundedGridRange4D self) -> IMP::Vector< IMP::algebra::GridIndexD< 4 > >"""
7155 return _IMP_algebra.BoundedGridRange4D_get_all_indexes(self)
7158 r"""get_indexes(BoundedGridRange4D self, ExtendedGridIndex4D lb, ExtendedGridIndex4D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 4 > >"""
7159 return _IMP_algebra.BoundedGridRange4D_get_indexes(self, lb, ub)
7161 def get_extended_indexes(self, lb, ub):
7162 r"""get_extended_indexes(BoundedGridRange4D self, ExtendedGridIndex4D lb, ExtendedGridIndex4D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 4 > >"""
7163 return _IMP_algebra.BoundedGridRange4D_get_extended_indexes(self, lb, ub)
7166 r"""get_index(BoundedGridRange4D self, ExtendedGridIndex4D v) -> GridIndex4D"""
7167 return _IMP_algebra.BoundedGridRange4D_get_index(self, v)
7169 def get_has_index(self, v):
7170 r"""get_has_index(BoundedGridRange4D self, ExtendedGridIndex4D v) -> bool"""
7171 return _IMP_algebra.BoundedGridRange4D_get_has_index(self, v)
7173 def get_minimum_extended_index(self):
7174 r"""get_minimum_extended_index(BoundedGridRange4D self) -> ExtendedGridIndex4D"""
7175 return _IMP_algebra.BoundedGridRange4D_get_minimum_extended_index(self)
7177 def get_maximum_extended_index(self):
7178 r"""get_maximum_extended_index(BoundedGridRange4D self) -> ExtendedGridIndex4D"""
7179 return _IMP_algebra.BoundedGridRange4D_get_maximum_extended_index(self)
7182 r"""__str__(BoundedGridRange4D self) -> std::string"""
7183 return _IMP_algebra.BoundedGridRange4D___str__(self)
7186 r"""__repr__(BoundedGridRange4D self) -> std::string"""
7187 return _IMP_algebra.BoundedGridRange4D___repr__(self)
7189 def __cmp__(self, arg2):
7190 r"""__cmp__(BoundedGridRange4D self, BoundedGridRange4D arg2) -> int"""
7191 return _IMP_algebra.BoundedGridRange4D___cmp__(self, arg2)
7193 def __eq__(self, arg2):
7194 r"""__eq__(BoundedGridRange4D self, BoundedGridRange4D arg2) -> bool"""
7195 return _IMP_algebra.BoundedGridRange4D___eq__(self, arg2)
7197 def _get_as_binary(self):
7198 r"""_get_as_binary(BoundedGridRange4D self) -> PyObject *"""
7199 return _IMP_algebra.BoundedGridRange4D__get_as_binary(self)
7201 def _set_from_binary(self, p):
7202 r"""_set_from_binary(BoundedGridRange4D self, PyObject * p)"""
7203 return _IMP_algebra.BoundedGridRange4D__set_from_binary(self, p)
7205 def __getstate__(self):
7206 p = self._get_as_binary()
7207 if len(self.__dict__) > 1:
7208 d = self.__dict__.copy()
7213 def __setstate__(self, p):
7214 if not hasattr(self,
'this'):
7216 if isinstance(p, tuple):
7218 self.__dict__.update(d)
7219 return self._set_from_binary(p)
7221 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange4D
7224 _IMP_algebra.BoundedGridRange4D_swigregister(BoundedGridRange4D)
7225 class BoundedGridRange5D(object):
7226 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 5 > class."""
7228 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7231 def get_is_bounded():
7232 r"""get_is_bounded() -> bool"""
7233 return _IMP_algebra.BoundedGridRange5D_get_is_bounded()
7235 def __init__(self, *args):
7237 __init__(BoundedGridRange5D self) -> BoundedGridRange5D
7238 __init__(BoundedGridRange5D self, IMP::Ints const & counts) -> BoundedGridRange5D
7240 _IMP_algebra.BoundedGridRange5D_swiginit(self, _IMP_algebra.new_BoundedGridRange5D(*args))
7242 def get_number_of_voxels(self, *args):
7244 get_number_of_voxels(BoundedGridRange5D self, unsigned int i) -> unsigned int
7245 get_number_of_voxels(BoundedGridRange5D self) -> unsigned int
7247 return _IMP_algebra.BoundedGridRange5D_get_number_of_voxels(self, *args)
7249 def get_end_index(self):
7250 r"""get_end_index(BoundedGridRange5D self) -> ExtendedGridIndex5D"""
7251 return _IMP_algebra.BoundedGridRange5D_get_end_index(self)
7253 def show(self, *args):
7254 r"""show(BoundedGridRange5D self, _ostream out=std::cout)"""
7255 return _IMP_algebra.BoundedGridRange5D_show(self, *args)
7257 def get_all_indexes(self):
7258 r"""get_all_indexes(BoundedGridRange5D self) -> IMP::Vector< IMP::algebra::GridIndexD< 5 > >"""
7259 return _IMP_algebra.BoundedGridRange5D_get_all_indexes(self)
7262 r"""get_indexes(BoundedGridRange5D self, ExtendedGridIndex5D lb, ExtendedGridIndex5D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 5 > >"""
7263 return _IMP_algebra.BoundedGridRange5D_get_indexes(self, lb, ub)
7265 def get_extended_indexes(self, lb, ub):
7266 r"""get_extended_indexes(BoundedGridRange5D self, ExtendedGridIndex5D lb, ExtendedGridIndex5D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 5 > >"""
7267 return _IMP_algebra.BoundedGridRange5D_get_extended_indexes(self, lb, ub)
7270 r"""get_index(BoundedGridRange5D self, ExtendedGridIndex5D v) -> GridIndex5D"""
7271 return _IMP_algebra.BoundedGridRange5D_get_index(self, v)
7273 def get_has_index(self, v):
7274 r"""get_has_index(BoundedGridRange5D self, ExtendedGridIndex5D v) -> bool"""
7275 return _IMP_algebra.BoundedGridRange5D_get_has_index(self, v)
7277 def get_minimum_extended_index(self):
7278 r"""get_minimum_extended_index(BoundedGridRange5D self) -> ExtendedGridIndex5D"""
7279 return _IMP_algebra.BoundedGridRange5D_get_minimum_extended_index(self)
7281 def get_maximum_extended_index(self):
7282 r"""get_maximum_extended_index(BoundedGridRange5D self) -> ExtendedGridIndex5D"""
7283 return _IMP_algebra.BoundedGridRange5D_get_maximum_extended_index(self)
7286 r"""__str__(BoundedGridRange5D self) -> std::string"""
7287 return _IMP_algebra.BoundedGridRange5D___str__(self)
7290 r"""__repr__(BoundedGridRange5D self) -> std::string"""
7291 return _IMP_algebra.BoundedGridRange5D___repr__(self)
7293 def __cmp__(self, arg2):
7294 r"""__cmp__(BoundedGridRange5D self, BoundedGridRange5D arg2) -> int"""
7295 return _IMP_algebra.BoundedGridRange5D___cmp__(self, arg2)
7297 def __eq__(self, arg2):
7298 r"""__eq__(BoundedGridRange5D self, BoundedGridRange5D arg2) -> bool"""
7299 return _IMP_algebra.BoundedGridRange5D___eq__(self, arg2)
7301 def _get_as_binary(self):
7302 r"""_get_as_binary(BoundedGridRange5D self) -> PyObject *"""
7303 return _IMP_algebra.BoundedGridRange5D__get_as_binary(self)
7305 def _set_from_binary(self, p):
7306 r"""_set_from_binary(BoundedGridRange5D self, PyObject * p)"""
7307 return _IMP_algebra.BoundedGridRange5D__set_from_binary(self, p)
7309 def __getstate__(self):
7310 p = self._get_as_binary()
7311 if len(self.__dict__) > 1:
7312 d = self.__dict__.copy()
7317 def __setstate__(self, p):
7318 if not hasattr(self,
'this'):
7320 if isinstance(p, tuple):
7322 self.__dict__.update(d)
7323 return self._set_from_binary(p)
7325 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange5D
7328 _IMP_algebra.BoundedGridRange5D_swigregister(BoundedGridRange5D)
7329 class BoundedGridRange6D(object):
7330 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< 6 > class."""
7332 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7335 def get_is_bounded():
7336 r"""get_is_bounded() -> bool"""
7337 return _IMP_algebra.BoundedGridRange6D_get_is_bounded()
7339 def __init__(self, *args):
7341 __init__(BoundedGridRange6D self) -> BoundedGridRange6D
7342 __init__(BoundedGridRange6D self, IMP::Ints const & counts) -> BoundedGridRange6D
7344 _IMP_algebra.BoundedGridRange6D_swiginit(self, _IMP_algebra.new_BoundedGridRange6D(*args))
7346 def get_number_of_voxels(self, *args):
7348 get_number_of_voxels(BoundedGridRange6D self, unsigned int i) -> unsigned int
7349 get_number_of_voxels(BoundedGridRange6D self) -> unsigned int
7351 return _IMP_algebra.BoundedGridRange6D_get_number_of_voxels(self, *args)
7353 def get_end_index(self):
7354 r"""get_end_index(BoundedGridRange6D self) -> ExtendedGridIndex6D"""
7355 return _IMP_algebra.BoundedGridRange6D_get_end_index(self)
7357 def show(self, *args):
7358 r"""show(BoundedGridRange6D self, _ostream out=std::cout)"""
7359 return _IMP_algebra.BoundedGridRange6D_show(self, *args)
7361 def get_all_indexes(self):
7362 r"""get_all_indexes(BoundedGridRange6D self) -> IMP::Vector< IMP::algebra::GridIndexD< 6 > >"""
7363 return _IMP_algebra.BoundedGridRange6D_get_all_indexes(self)
7366 r"""get_indexes(BoundedGridRange6D self, ExtendedGridIndex6D lb, ExtendedGridIndex6D ub) -> IMP::Vector< IMP::algebra::GridIndexD< 6 > >"""
7367 return _IMP_algebra.BoundedGridRange6D_get_indexes(self, lb, ub)
7369 def get_extended_indexes(self, lb, ub):
7370 r"""get_extended_indexes(BoundedGridRange6D self, ExtendedGridIndex6D lb, ExtendedGridIndex6D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 6 > >"""
7371 return _IMP_algebra.BoundedGridRange6D_get_extended_indexes(self, lb, ub)
7374 r"""get_index(BoundedGridRange6D self, ExtendedGridIndex6D v) -> GridIndex6D"""
7375 return _IMP_algebra.BoundedGridRange6D_get_index(self, v)
7377 def get_has_index(self, v):
7378 r"""get_has_index(BoundedGridRange6D self, ExtendedGridIndex6D v) -> bool"""
7379 return _IMP_algebra.BoundedGridRange6D_get_has_index(self, v)
7381 def get_minimum_extended_index(self):
7382 r"""get_minimum_extended_index(BoundedGridRange6D self) -> ExtendedGridIndex6D"""
7383 return _IMP_algebra.BoundedGridRange6D_get_minimum_extended_index(self)
7385 def get_maximum_extended_index(self):
7386 r"""get_maximum_extended_index(BoundedGridRange6D self) -> ExtendedGridIndex6D"""
7387 return _IMP_algebra.BoundedGridRange6D_get_maximum_extended_index(self)
7390 r"""__str__(BoundedGridRange6D self) -> std::string"""
7391 return _IMP_algebra.BoundedGridRange6D___str__(self)
7394 r"""__repr__(BoundedGridRange6D self) -> std::string"""
7395 return _IMP_algebra.BoundedGridRange6D___repr__(self)
7397 def __cmp__(self, arg2):
7398 r"""__cmp__(BoundedGridRange6D self, BoundedGridRange6D arg2) -> int"""
7399 return _IMP_algebra.BoundedGridRange6D___cmp__(self, arg2)
7401 def __eq__(self, arg2):
7402 r"""__eq__(BoundedGridRange6D self, BoundedGridRange6D arg2) -> bool"""
7403 return _IMP_algebra.BoundedGridRange6D___eq__(self, arg2)
7405 def _get_as_binary(self):
7406 r"""_get_as_binary(BoundedGridRange6D self) -> PyObject *"""
7407 return _IMP_algebra.BoundedGridRange6D__get_as_binary(self)
7409 def _set_from_binary(self, p):
7410 r"""_set_from_binary(BoundedGridRange6D self, PyObject * p)"""
7411 return _IMP_algebra.BoundedGridRange6D__set_from_binary(self, p)
7413 def __getstate__(self):
7414 p = self._get_as_binary()
7415 if len(self.__dict__) > 1:
7416 d = self.__dict__.copy()
7421 def __setstate__(self, p):
7422 if not hasattr(self,
'this'):
7424 if isinstance(p, tuple):
7426 self.__dict__.update(d)
7427 return self._set_from_binary(p)
7429 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRange6D
7432 _IMP_algebra.BoundedGridRange6D_swigregister(BoundedGridRange6D)
7433 class BoundedGridRangeKD(object):
7434 r"""Proxy of C++ IMP::algebra::BoundedGridRangeD< -1 > class."""
7436 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7439 def get_is_bounded():
7440 r"""get_is_bounded() -> bool"""
7441 return _IMP_algebra.BoundedGridRangeKD_get_is_bounded()
7443 def __init__(self, *args):
7445 __init__(BoundedGridRangeKD self) -> BoundedGridRangeKD
7446 __init__(BoundedGridRangeKD self, IMP::Ints const & counts) -> BoundedGridRangeKD
7448 _IMP_algebra.BoundedGridRangeKD_swiginit(self, _IMP_algebra.new_BoundedGridRangeKD(*args))
7450 def get_number_of_voxels(self, *args):
7452 get_number_of_voxels(BoundedGridRangeKD self, unsigned int i) -> unsigned int
7453 get_number_of_voxels(BoundedGridRangeKD self) -> unsigned int
7455 return _IMP_algebra.BoundedGridRangeKD_get_number_of_voxels(self, *args)
7457 def get_end_index(self):
7458 r"""get_end_index(BoundedGridRangeKD self) -> ExtendedGridIndexKD"""
7459 return _IMP_algebra.BoundedGridRangeKD_get_end_index(self)
7461 def show(self, *args):
7462 r"""show(BoundedGridRangeKD self, _ostream out=std::cout)"""
7463 return _IMP_algebra.BoundedGridRangeKD_show(self, *args)
7465 def get_all_indexes(self):
7466 r"""get_all_indexes(BoundedGridRangeKD self) -> IMP::Vector< IMP::algebra::GridIndexD< -1 > >"""
7467 return _IMP_algebra.BoundedGridRangeKD_get_all_indexes(self)
7470 r"""get_indexes(BoundedGridRangeKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::GridIndexD< -1 > >"""
7471 return _IMP_algebra.BoundedGridRangeKD_get_indexes(self, lb, ub)
7473 def get_extended_indexes(self, lb, ub):
7474 r"""get_extended_indexes(BoundedGridRangeKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 > >"""
7475 return _IMP_algebra.BoundedGridRangeKD_get_extended_indexes(self, lb, ub)
7478 r"""get_index(BoundedGridRangeKD self, ExtendedGridIndexKD v) -> GridIndexKD"""
7479 return _IMP_algebra.BoundedGridRangeKD_get_index(self, v)
7481 def get_has_index(self, v):
7482 r"""get_has_index(BoundedGridRangeKD self, ExtendedGridIndexKD v) -> bool"""
7483 return _IMP_algebra.BoundedGridRangeKD_get_has_index(self, v)
7485 def get_minimum_extended_index(self):
7486 r"""get_minimum_extended_index(BoundedGridRangeKD self) -> ExtendedGridIndexKD"""
7487 return _IMP_algebra.BoundedGridRangeKD_get_minimum_extended_index(self)
7489 def get_maximum_extended_index(self):
7490 r"""get_maximum_extended_index(BoundedGridRangeKD self) -> ExtendedGridIndexKD"""
7491 return _IMP_algebra.BoundedGridRangeKD_get_maximum_extended_index(self)
7494 r"""__str__(BoundedGridRangeKD self) -> std::string"""
7495 return _IMP_algebra.BoundedGridRangeKD___str__(self)
7498 r"""__repr__(BoundedGridRangeKD self) -> std::string"""
7499 return _IMP_algebra.BoundedGridRangeKD___repr__(self)
7501 def __cmp__(self, arg2):
7502 r"""__cmp__(BoundedGridRangeKD self, BoundedGridRangeKD arg2) -> int"""
7503 return _IMP_algebra.BoundedGridRangeKD___cmp__(self, arg2)
7505 def __eq__(self, arg2):
7506 r"""__eq__(BoundedGridRangeKD self, BoundedGridRangeKD arg2) -> bool"""
7507 return _IMP_algebra.BoundedGridRangeKD___eq__(self, arg2)
7509 def _get_as_binary(self):
7510 r"""_get_as_binary(BoundedGridRangeKD self) -> PyObject *"""
7511 return _IMP_algebra.BoundedGridRangeKD__get_as_binary(self)
7513 def _set_from_binary(self, p):
7514 r"""_set_from_binary(BoundedGridRangeKD self, PyObject * p)"""
7515 return _IMP_algebra.BoundedGridRangeKD__set_from_binary(self, p)
7517 def __getstate__(self):
7518 p = self._get_as_binary()
7519 if len(self.__dict__) > 1:
7520 d = self.__dict__.copy()
7525 def __setstate__(self, p):
7526 if not hasattr(self,
'this'):
7528 if isinstance(p, tuple):
7530 self.__dict__.update(d)
7531 return self._set_from_binary(p)
7533 __swig_destroy__ = _IMP_algebra.delete_BoundedGridRangeKD
7536 _IMP_algebra.BoundedGridRangeKD_swigregister(BoundedGridRangeKD)
7537 class UnboundedGridRange1D(object):
7538 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 1 > class."""
7540 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7542 def __init__(self, *args):
7544 __init__(UnboundedGridRange1D self) -> UnboundedGridRange1D
7545 __init__(UnboundedGridRange1D self, IMP::Ints const & arg2) -> UnboundedGridRange1D
7547 _IMP_algebra.UnboundedGridRange1D_swiginit(self, _IMP_algebra.new_UnboundedGridRange1D(*args))
7549 def set_number_of_voxels(self, arg2):
7550 r"""set_number_of_voxels(UnboundedGridRange1D self, IMP::Ints arg2)"""
7551 return _IMP_algebra.UnboundedGridRange1D_set_number_of_voxels(self, arg2)
7553 def get_number_of_voxels(self, arg2):
7554 r"""get_number_of_voxels(UnboundedGridRange1D self, int arg2) -> unsigned int"""
7555 return _IMP_algebra.UnboundedGridRange1D_get_number_of_voxels(self, arg2)
7558 def get_is_bounded():
7559 r"""get_is_bounded() -> bool"""
7560 return _IMP_algebra.UnboundedGridRange1D_get_is_bounded()
7562 def get_has_index(self, arg2):
7563 r"""get_has_index(UnboundedGridRange1D self, ExtendedGridIndex1D arg2) -> bool"""
7564 return _IMP_algebra.UnboundedGridRange1D_get_has_index(self, arg2)
7566 def show(self, *args):
7567 r"""show(UnboundedGridRange1D self, _ostream out=std::cout)"""
7568 return _IMP_algebra.UnboundedGridRange1D_show(self, *args)
7570 def get_extended_indexes(self, lb, ub):
7571 r"""get_extended_indexes(UnboundedGridRange1D self, ExtendedGridIndex1D lb, ExtendedGridIndex1D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 1 > >"""
7572 return _IMP_algebra.UnboundedGridRange1D_get_extended_indexes(self, lb, ub)
7575 r"""__str__(UnboundedGridRange1D self) -> std::string"""
7576 return _IMP_algebra.UnboundedGridRange1D___str__(self)
7579 r"""__repr__(UnboundedGridRange1D self) -> std::string"""
7580 return _IMP_algebra.UnboundedGridRange1D___repr__(self)
7582 def __cmp__(self, arg2):
7583 r"""__cmp__(UnboundedGridRange1D self, UnboundedGridRange1D arg2) -> int"""
7584 return _IMP_algebra.UnboundedGridRange1D___cmp__(self, arg2)
7586 def __eq__(self, arg2):
7587 r"""__eq__(UnboundedGridRange1D self, UnboundedGridRange1D arg2) -> bool"""
7588 return _IMP_algebra.UnboundedGridRange1D___eq__(self, arg2)
7590 def _get_as_binary(self):
7591 r"""_get_as_binary(UnboundedGridRange1D self) -> PyObject *"""
7592 return _IMP_algebra.UnboundedGridRange1D__get_as_binary(self)
7594 def _set_from_binary(self, p):
7595 r"""_set_from_binary(UnboundedGridRange1D self, PyObject * p)"""
7596 return _IMP_algebra.UnboundedGridRange1D__set_from_binary(self, p)
7598 def __getstate__(self):
7599 p = self._get_as_binary()
7600 if len(self.__dict__) > 1:
7601 d = self.__dict__.copy()
7606 def __setstate__(self, p):
7607 if not hasattr(self,
'this'):
7609 if isinstance(p, tuple):
7611 self.__dict__.update(d)
7612 return self._set_from_binary(p)
7614 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange1D
7617 _IMP_algebra.UnboundedGridRange1D_swigregister(UnboundedGridRange1D)
7618 class UnboundedGridRange2D(object):
7619 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 2 > class."""
7621 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7623 def __init__(self, *args):
7625 __init__(UnboundedGridRange2D self) -> UnboundedGridRange2D
7626 __init__(UnboundedGridRange2D self, IMP::Ints const & arg2) -> UnboundedGridRange2D
7628 _IMP_algebra.UnboundedGridRange2D_swiginit(self, _IMP_algebra.new_UnboundedGridRange2D(*args))
7630 def set_number_of_voxels(self, arg2):
7631 r"""set_number_of_voxels(UnboundedGridRange2D self, IMP::Ints arg2)"""
7632 return _IMP_algebra.UnboundedGridRange2D_set_number_of_voxels(self, arg2)
7634 def get_number_of_voxels(self, arg2):
7635 r"""get_number_of_voxels(UnboundedGridRange2D self, int arg2) -> unsigned int"""
7636 return _IMP_algebra.UnboundedGridRange2D_get_number_of_voxels(self, arg2)
7639 def get_is_bounded():
7640 r"""get_is_bounded() -> bool"""
7641 return _IMP_algebra.UnboundedGridRange2D_get_is_bounded()
7643 def get_has_index(self, arg2):
7644 r"""get_has_index(UnboundedGridRange2D self, ExtendedGridIndex2D arg2) -> bool"""
7645 return _IMP_algebra.UnboundedGridRange2D_get_has_index(self, arg2)
7647 def show(self, *args):
7648 r"""show(UnboundedGridRange2D self, _ostream out=std::cout)"""
7649 return _IMP_algebra.UnboundedGridRange2D_show(self, *args)
7651 def get_extended_indexes(self, lb, ub):
7652 r"""get_extended_indexes(UnboundedGridRange2D self, ExtendedGridIndex2D lb, ExtendedGridIndex2D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 2 > >"""
7653 return _IMP_algebra.UnboundedGridRange2D_get_extended_indexes(self, lb, ub)
7656 r"""__str__(UnboundedGridRange2D self) -> std::string"""
7657 return _IMP_algebra.UnboundedGridRange2D___str__(self)
7660 r"""__repr__(UnboundedGridRange2D self) -> std::string"""
7661 return _IMP_algebra.UnboundedGridRange2D___repr__(self)
7663 def __cmp__(self, arg2):
7664 r"""__cmp__(UnboundedGridRange2D self, UnboundedGridRange2D arg2) -> int"""
7665 return _IMP_algebra.UnboundedGridRange2D___cmp__(self, arg2)
7667 def __eq__(self, arg2):
7668 r"""__eq__(UnboundedGridRange2D self, UnboundedGridRange2D arg2) -> bool"""
7669 return _IMP_algebra.UnboundedGridRange2D___eq__(self, arg2)
7671 def _get_as_binary(self):
7672 r"""_get_as_binary(UnboundedGridRange2D self) -> PyObject *"""
7673 return _IMP_algebra.UnboundedGridRange2D__get_as_binary(self)
7675 def _set_from_binary(self, p):
7676 r"""_set_from_binary(UnboundedGridRange2D self, PyObject * p)"""
7677 return _IMP_algebra.UnboundedGridRange2D__set_from_binary(self, p)
7679 def __getstate__(self):
7680 p = self._get_as_binary()
7681 if len(self.__dict__) > 1:
7682 d = self.__dict__.copy()
7687 def __setstate__(self, p):
7688 if not hasattr(self,
'this'):
7690 if isinstance(p, tuple):
7692 self.__dict__.update(d)
7693 return self._set_from_binary(p)
7695 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange2D
7698 _IMP_algebra.UnboundedGridRange2D_swigregister(UnboundedGridRange2D)
7699 class UnboundedGridRange3D(object):
7700 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 3 > class."""
7702 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7704 def __init__(self, *args):
7706 __init__(UnboundedGridRange3D self) -> UnboundedGridRange3D
7707 __init__(UnboundedGridRange3D self, IMP::Ints const & arg2) -> UnboundedGridRange3D
7709 _IMP_algebra.UnboundedGridRange3D_swiginit(self, _IMP_algebra.new_UnboundedGridRange3D(*args))
7711 def set_number_of_voxels(self, arg2):
7712 r"""set_number_of_voxels(UnboundedGridRange3D self, IMP::Ints arg2)"""
7713 return _IMP_algebra.UnboundedGridRange3D_set_number_of_voxels(self, arg2)
7715 def get_number_of_voxels(self, arg2):
7716 r"""get_number_of_voxels(UnboundedGridRange3D self, int arg2) -> unsigned int"""
7717 return _IMP_algebra.UnboundedGridRange3D_get_number_of_voxels(self, arg2)
7720 def get_is_bounded():
7721 r"""get_is_bounded() -> bool"""
7722 return _IMP_algebra.UnboundedGridRange3D_get_is_bounded()
7724 def get_has_index(self, arg2):
7725 r"""get_has_index(UnboundedGridRange3D self, ExtendedGridIndex3D arg2) -> bool"""
7726 return _IMP_algebra.UnboundedGridRange3D_get_has_index(self, arg2)
7728 def show(self, *args):
7729 r"""show(UnboundedGridRange3D self, _ostream out=std::cout)"""
7730 return _IMP_algebra.UnboundedGridRange3D_show(self, *args)
7732 def get_extended_indexes(self, lb, ub):
7733 r"""get_extended_indexes(UnboundedGridRange3D self, ExtendedGridIndex3D lb, ExtendedGridIndex3D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 3 > >"""
7734 return _IMP_algebra.UnboundedGridRange3D_get_extended_indexes(self, lb, ub)
7737 r"""__str__(UnboundedGridRange3D self) -> std::string"""
7738 return _IMP_algebra.UnboundedGridRange3D___str__(self)
7741 r"""__repr__(UnboundedGridRange3D self) -> std::string"""
7742 return _IMP_algebra.UnboundedGridRange3D___repr__(self)
7744 def __cmp__(self, arg2):
7745 r"""__cmp__(UnboundedGridRange3D self, UnboundedGridRange3D arg2) -> int"""
7746 return _IMP_algebra.UnboundedGridRange3D___cmp__(self, arg2)
7748 def __eq__(self, arg2):
7749 r"""__eq__(UnboundedGridRange3D self, UnboundedGridRange3D arg2) -> bool"""
7750 return _IMP_algebra.UnboundedGridRange3D___eq__(self, arg2)
7752 def _get_as_binary(self):
7753 r"""_get_as_binary(UnboundedGridRange3D self) -> PyObject *"""
7754 return _IMP_algebra.UnboundedGridRange3D__get_as_binary(self)
7756 def _set_from_binary(self, p):
7757 r"""_set_from_binary(UnboundedGridRange3D self, PyObject * p)"""
7758 return _IMP_algebra.UnboundedGridRange3D__set_from_binary(self, p)
7760 def __getstate__(self):
7761 p = self._get_as_binary()
7762 if len(self.__dict__) > 1:
7763 d = self.__dict__.copy()
7768 def __setstate__(self, p):
7769 if not hasattr(self,
'this'):
7771 if isinstance(p, tuple):
7773 self.__dict__.update(d)
7774 return self._set_from_binary(p)
7776 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange3D
7779 _IMP_algebra.UnboundedGridRange3D_swigregister(UnboundedGridRange3D)
7780 class UnboundedGridRange4D(object):
7781 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 4 > class."""
7783 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7785 def __init__(self, *args):
7787 __init__(UnboundedGridRange4D self) -> UnboundedGridRange4D
7788 __init__(UnboundedGridRange4D self, IMP::Ints const & arg2) -> UnboundedGridRange4D
7790 _IMP_algebra.UnboundedGridRange4D_swiginit(self, _IMP_algebra.new_UnboundedGridRange4D(*args))
7792 def set_number_of_voxels(self, arg2):
7793 r"""set_number_of_voxels(UnboundedGridRange4D self, IMP::Ints arg2)"""
7794 return _IMP_algebra.UnboundedGridRange4D_set_number_of_voxels(self, arg2)
7796 def get_number_of_voxels(self, arg2):
7797 r"""get_number_of_voxels(UnboundedGridRange4D self, int arg2) -> unsigned int"""
7798 return _IMP_algebra.UnboundedGridRange4D_get_number_of_voxels(self, arg2)
7801 def get_is_bounded():
7802 r"""get_is_bounded() -> bool"""
7803 return _IMP_algebra.UnboundedGridRange4D_get_is_bounded()
7805 def get_has_index(self, arg2):
7806 r"""get_has_index(UnboundedGridRange4D self, ExtendedGridIndex4D arg2) -> bool"""
7807 return _IMP_algebra.UnboundedGridRange4D_get_has_index(self, arg2)
7809 def show(self, *args):
7810 r"""show(UnboundedGridRange4D self, _ostream out=std::cout)"""
7811 return _IMP_algebra.UnboundedGridRange4D_show(self, *args)
7813 def get_extended_indexes(self, lb, ub):
7814 r"""get_extended_indexes(UnboundedGridRange4D self, ExtendedGridIndex4D lb, ExtendedGridIndex4D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 4 > >"""
7815 return _IMP_algebra.UnboundedGridRange4D_get_extended_indexes(self, lb, ub)
7818 r"""__str__(UnboundedGridRange4D self) -> std::string"""
7819 return _IMP_algebra.UnboundedGridRange4D___str__(self)
7822 r"""__repr__(UnboundedGridRange4D self) -> std::string"""
7823 return _IMP_algebra.UnboundedGridRange4D___repr__(self)
7825 def __cmp__(self, arg2):
7826 r"""__cmp__(UnboundedGridRange4D self, UnboundedGridRange4D arg2) -> int"""
7827 return _IMP_algebra.UnboundedGridRange4D___cmp__(self, arg2)
7829 def __eq__(self, arg2):
7830 r"""__eq__(UnboundedGridRange4D self, UnboundedGridRange4D arg2) -> bool"""
7831 return _IMP_algebra.UnboundedGridRange4D___eq__(self, arg2)
7833 def _get_as_binary(self):
7834 r"""_get_as_binary(UnboundedGridRange4D self) -> PyObject *"""
7835 return _IMP_algebra.UnboundedGridRange4D__get_as_binary(self)
7837 def _set_from_binary(self, p):
7838 r"""_set_from_binary(UnboundedGridRange4D self, PyObject * p)"""
7839 return _IMP_algebra.UnboundedGridRange4D__set_from_binary(self, p)
7841 def __getstate__(self):
7842 p = self._get_as_binary()
7843 if len(self.__dict__) > 1:
7844 d = self.__dict__.copy()
7849 def __setstate__(self, p):
7850 if not hasattr(self,
'this'):
7852 if isinstance(p, tuple):
7854 self.__dict__.update(d)
7855 return self._set_from_binary(p)
7857 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange4D
7860 _IMP_algebra.UnboundedGridRange4D_swigregister(UnboundedGridRange4D)
7861 class UnboundedGridRange5D(object):
7862 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 5 > class."""
7864 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7866 def __init__(self, *args):
7868 __init__(UnboundedGridRange5D self) -> UnboundedGridRange5D
7869 __init__(UnboundedGridRange5D self, IMP::Ints const & arg2) -> UnboundedGridRange5D
7871 _IMP_algebra.UnboundedGridRange5D_swiginit(self, _IMP_algebra.new_UnboundedGridRange5D(*args))
7873 def set_number_of_voxels(self, arg2):
7874 r"""set_number_of_voxels(UnboundedGridRange5D self, IMP::Ints arg2)"""
7875 return _IMP_algebra.UnboundedGridRange5D_set_number_of_voxels(self, arg2)
7877 def get_number_of_voxels(self, arg2):
7878 r"""get_number_of_voxels(UnboundedGridRange5D self, int arg2) -> unsigned int"""
7879 return _IMP_algebra.UnboundedGridRange5D_get_number_of_voxels(self, arg2)
7882 def get_is_bounded():
7883 r"""get_is_bounded() -> bool"""
7884 return _IMP_algebra.UnboundedGridRange5D_get_is_bounded()
7886 def get_has_index(self, arg2):
7887 r"""get_has_index(UnboundedGridRange5D self, ExtendedGridIndex5D arg2) -> bool"""
7888 return _IMP_algebra.UnboundedGridRange5D_get_has_index(self, arg2)
7890 def show(self, *args):
7891 r"""show(UnboundedGridRange5D self, _ostream out=std::cout)"""
7892 return _IMP_algebra.UnboundedGridRange5D_show(self, *args)
7894 def get_extended_indexes(self, lb, ub):
7895 r"""get_extended_indexes(UnboundedGridRange5D self, ExtendedGridIndex5D lb, ExtendedGridIndex5D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 5 > >"""
7896 return _IMP_algebra.UnboundedGridRange5D_get_extended_indexes(self, lb, ub)
7899 r"""__str__(UnboundedGridRange5D self) -> std::string"""
7900 return _IMP_algebra.UnboundedGridRange5D___str__(self)
7903 r"""__repr__(UnboundedGridRange5D self) -> std::string"""
7904 return _IMP_algebra.UnboundedGridRange5D___repr__(self)
7906 def __cmp__(self, arg2):
7907 r"""__cmp__(UnboundedGridRange5D self, UnboundedGridRange5D arg2) -> int"""
7908 return _IMP_algebra.UnboundedGridRange5D___cmp__(self, arg2)
7910 def __eq__(self, arg2):
7911 r"""__eq__(UnboundedGridRange5D self, UnboundedGridRange5D arg2) -> bool"""
7912 return _IMP_algebra.UnboundedGridRange5D___eq__(self, arg2)
7914 def _get_as_binary(self):
7915 r"""_get_as_binary(UnboundedGridRange5D self) -> PyObject *"""
7916 return _IMP_algebra.UnboundedGridRange5D__get_as_binary(self)
7918 def _set_from_binary(self, p):
7919 r"""_set_from_binary(UnboundedGridRange5D self, PyObject * p)"""
7920 return _IMP_algebra.UnboundedGridRange5D__set_from_binary(self, p)
7922 def __getstate__(self):
7923 p = self._get_as_binary()
7924 if len(self.__dict__) > 1:
7925 d = self.__dict__.copy()
7930 def __setstate__(self, p):
7931 if not hasattr(self,
'this'):
7933 if isinstance(p, tuple):
7935 self.__dict__.update(d)
7936 return self._set_from_binary(p)
7938 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange5D
7941 _IMP_algebra.UnboundedGridRange5D_swigregister(UnboundedGridRange5D)
7942 class UnboundedGridRange6D(object):
7943 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< 6 > class."""
7945 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
7947 def __init__(self, *args):
7949 __init__(UnboundedGridRange6D self) -> UnboundedGridRange6D
7950 __init__(UnboundedGridRange6D self, IMP::Ints const & arg2) -> UnboundedGridRange6D
7952 _IMP_algebra.UnboundedGridRange6D_swiginit(self, _IMP_algebra.new_UnboundedGridRange6D(*args))
7954 def set_number_of_voxels(self, arg2):
7955 r"""set_number_of_voxels(UnboundedGridRange6D self, IMP::Ints arg2)"""
7956 return _IMP_algebra.UnboundedGridRange6D_set_number_of_voxels(self, arg2)
7958 def get_number_of_voxels(self, arg2):
7959 r"""get_number_of_voxels(UnboundedGridRange6D self, int arg2) -> unsigned int"""
7960 return _IMP_algebra.UnboundedGridRange6D_get_number_of_voxels(self, arg2)
7963 def get_is_bounded():
7964 r"""get_is_bounded() -> bool"""
7965 return _IMP_algebra.UnboundedGridRange6D_get_is_bounded()
7967 def get_has_index(self, arg2):
7968 r"""get_has_index(UnboundedGridRange6D self, ExtendedGridIndex6D arg2) -> bool"""
7969 return _IMP_algebra.UnboundedGridRange6D_get_has_index(self, arg2)
7971 def show(self, *args):
7972 r"""show(UnboundedGridRange6D self, _ostream out=std::cout)"""
7973 return _IMP_algebra.UnboundedGridRange6D_show(self, *args)
7975 def get_extended_indexes(self, lb, ub):
7976 r"""get_extended_indexes(UnboundedGridRange6D self, ExtendedGridIndex6D lb, ExtendedGridIndex6D ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< 6 > >"""
7977 return _IMP_algebra.UnboundedGridRange6D_get_extended_indexes(self, lb, ub)
7980 r"""__str__(UnboundedGridRange6D self) -> std::string"""
7981 return _IMP_algebra.UnboundedGridRange6D___str__(self)
7984 r"""__repr__(UnboundedGridRange6D self) -> std::string"""
7985 return _IMP_algebra.UnboundedGridRange6D___repr__(self)
7987 def __cmp__(self, arg2):
7988 r"""__cmp__(UnboundedGridRange6D self, UnboundedGridRange6D arg2) -> int"""
7989 return _IMP_algebra.UnboundedGridRange6D___cmp__(self, arg2)
7991 def __eq__(self, arg2):
7992 r"""__eq__(UnboundedGridRange6D self, UnboundedGridRange6D arg2) -> bool"""
7993 return _IMP_algebra.UnboundedGridRange6D___eq__(self, arg2)
7995 def _get_as_binary(self):
7996 r"""_get_as_binary(UnboundedGridRange6D self) -> PyObject *"""
7997 return _IMP_algebra.UnboundedGridRange6D__get_as_binary(self)
7999 def _set_from_binary(self, p):
8000 r"""_set_from_binary(UnboundedGridRange6D self, PyObject * p)"""
8001 return _IMP_algebra.UnboundedGridRange6D__set_from_binary(self, p)
8003 def __getstate__(self):
8004 p = self._get_as_binary()
8005 if len(self.__dict__) > 1:
8006 d = self.__dict__.copy()
8011 def __setstate__(self, p):
8012 if not hasattr(self,
'this'):
8014 if isinstance(p, tuple):
8016 self.__dict__.update(d)
8017 return self._set_from_binary(p)
8019 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRange6D
8022 _IMP_algebra.UnboundedGridRange6D_swigregister(UnboundedGridRange6D)
8023 class UnboundedGridRangeKD(object):
8024 r"""Proxy of C++ IMP::algebra::UnboundedGridRangeD< -1 > class."""
8026 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8028 def __init__(self, *args):
8030 __init__(UnboundedGridRangeKD self) -> UnboundedGridRangeKD
8031 __init__(UnboundedGridRangeKD self, IMP::Ints const & arg2) -> UnboundedGridRangeKD
8033 _IMP_algebra.UnboundedGridRangeKD_swiginit(self, _IMP_algebra.new_UnboundedGridRangeKD(*args))
8035 def set_number_of_voxels(self, arg2):
8036 r"""set_number_of_voxels(UnboundedGridRangeKD self, IMP::Ints arg2)"""
8037 return _IMP_algebra.UnboundedGridRangeKD_set_number_of_voxels(self, arg2)
8039 def get_number_of_voxels(self, arg2):
8040 r"""get_number_of_voxels(UnboundedGridRangeKD self, int arg2) -> unsigned int"""
8041 return _IMP_algebra.UnboundedGridRangeKD_get_number_of_voxels(self, arg2)
8044 def get_is_bounded():
8045 r"""get_is_bounded() -> bool"""
8046 return _IMP_algebra.UnboundedGridRangeKD_get_is_bounded()
8048 def get_has_index(self, arg2):
8049 r"""get_has_index(UnboundedGridRangeKD self, ExtendedGridIndexKD arg2) -> bool"""
8050 return _IMP_algebra.UnboundedGridRangeKD_get_has_index(self, arg2)
8052 def show(self, *args):
8053 r"""show(UnboundedGridRangeKD self, _ostream out=std::cout)"""
8054 return _IMP_algebra.UnboundedGridRangeKD_show(self, *args)
8056 def get_extended_indexes(self, lb, ub):
8057 r"""get_extended_indexes(UnboundedGridRangeKD self, ExtendedGridIndexKD lb, ExtendedGridIndexKD ub) -> IMP::Vector< IMP::algebra::ExtendedGridIndexD< -1 > >"""
8058 return _IMP_algebra.UnboundedGridRangeKD_get_extended_indexes(self, lb, ub)
8061 r"""__str__(UnboundedGridRangeKD self) -> std::string"""
8062 return _IMP_algebra.UnboundedGridRangeKD___str__(self)
8065 r"""__repr__(UnboundedGridRangeKD self) -> std::string"""
8066 return _IMP_algebra.UnboundedGridRangeKD___repr__(self)
8068 def __cmp__(self, arg2):
8069 r"""__cmp__(UnboundedGridRangeKD self, UnboundedGridRangeKD arg2) -> int"""
8070 return _IMP_algebra.UnboundedGridRangeKD___cmp__(self, arg2)
8072 def __eq__(self, arg2):
8073 r"""__eq__(UnboundedGridRangeKD self, UnboundedGridRangeKD arg2) -> bool"""
8074 return _IMP_algebra.UnboundedGridRangeKD___eq__(self, arg2)
8076 def _get_as_binary(self):
8077 r"""_get_as_binary(UnboundedGridRangeKD self) -> PyObject *"""
8078 return _IMP_algebra.UnboundedGridRangeKD__get_as_binary(self)
8080 def _set_from_binary(self, p):
8081 r"""_set_from_binary(UnboundedGridRangeKD self, PyObject * p)"""
8082 return _IMP_algebra.UnboundedGridRangeKD__set_from_binary(self, p)
8084 def __getstate__(self):
8085 p = self._get_as_binary()
8086 if len(self.__dict__) > 1:
8087 d = self.__dict__.copy()
8092 def __setstate__(self, p):
8093 if not hasattr(self,
'this'):
8095 if isinstance(p, tuple):
8097 self.__dict__.update(d)
8098 return self._set_from_binary(p)
8100 __swig_destroy__ = _IMP_algebra.delete_UnboundedGridRangeKD
8103 _IMP_algebra.UnboundedGridRangeKD_swigregister(UnboundedGridRangeKD)
8104 class DefaultEmbedding1D(object):
8105 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 1 > class."""
8107 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8109 def __init__(self, *args):
8111 __init__(DefaultEmbedding1D self, Vector1D origin, Vector1D cell) -> DefaultEmbedding1D
8112 __init__(DefaultEmbedding1D self) -> DefaultEmbedding1D
8114 _IMP_algebra.DefaultEmbedding1D_swiginit(self, _IMP_algebra.new_DefaultEmbedding1D(*args))
8116 def set_origin(self, o):
8117 r"""set_origin(DefaultEmbedding1D self, Vector1D o)"""
8118 return _IMP_algebra.DefaultEmbedding1D_set_origin(self, o)
8120 def get_origin(self):
8121 r"""get_origin(DefaultEmbedding1D self) -> Vector1D"""
8122 return _IMP_algebra.DefaultEmbedding1D_get_origin(self)
8124 def get_dimension(self):
8125 r"""get_dimension(DefaultEmbedding1D self) -> unsigned int"""
8126 return _IMP_algebra.DefaultEmbedding1D_get_dimension(self)
8128 def set_unit_cell(self, o):
8129 r"""set_unit_cell(DefaultEmbedding1D self, Vector1D o)"""
8130 return _IMP_algebra.DefaultEmbedding1D_set_unit_cell(self, o)
8132 def get_inverse_unit_cell(self):
8133 r"""get_inverse_unit_cell(DefaultEmbedding1D self) -> Vector1D"""
8134 return _IMP_algebra.DefaultEmbedding1D_get_inverse_unit_cell(self)
8136 def get_unit_cell(self):
8137 r"""get_unit_cell(DefaultEmbedding1D self) -> Vector1D"""
8138 return _IMP_algebra.DefaultEmbedding1D_get_unit_cell(self)
8140 def get_extended_index(self, o):
8141 r"""get_extended_index(DefaultEmbedding1D self, Vector1D o) -> ExtendedGridIndex1D"""
8142 return _IMP_algebra.DefaultEmbedding1D_get_extended_index(self, o)
8145 r"""get_index(DefaultEmbedding1D self, Vector1D o) -> GridIndex1D"""
8146 return _IMP_algebra.DefaultEmbedding1D_get_index(self, o)
8148 def get_center(self, *args):
8150 get_center(DefaultEmbedding1D self, ExtendedGridIndex1D ei) -> Vector1D
8151 get_center(DefaultEmbedding1D self, GridIndex1D ei) -> Vector1D
8153 return _IMP_algebra.DefaultEmbedding1D_get_center(self, *args)
8155 def get_bounding_box(self, *args):
8157 get_bounding_box(DefaultEmbedding1D self, ExtendedGridIndex1D ei) -> BoundingBox1D
8158 get_bounding_box(DefaultEmbedding1D self, GridIndex1D ei) -> BoundingBox1D
8160 return _IMP_algebra.DefaultEmbedding1D_get_bounding_box(self, *args)
8162 def show(self, *args):
8163 r"""show(DefaultEmbedding1D self, _ostream out=std::cout)"""
8164 return _IMP_algebra.DefaultEmbedding1D_show(self, *args)
8167 r"""__str__(DefaultEmbedding1D self) -> std::string"""
8168 return _IMP_algebra.DefaultEmbedding1D___str__(self)
8171 r"""__repr__(DefaultEmbedding1D self) -> std::string"""
8172 return _IMP_algebra.DefaultEmbedding1D___repr__(self)
8174 def __cmp__(self, arg2):
8175 r"""__cmp__(DefaultEmbedding1D self, DefaultEmbedding1D arg2) -> int"""
8176 return _IMP_algebra.DefaultEmbedding1D___cmp__(self, arg2)
8178 def __eq__(self, arg2):
8179 r"""__eq__(DefaultEmbedding1D self, DefaultEmbedding1D arg2) -> bool"""
8180 return _IMP_algebra.DefaultEmbedding1D___eq__(self, arg2)
8182 def _get_as_binary(self):
8183 r"""_get_as_binary(DefaultEmbedding1D self) -> PyObject *"""
8184 return _IMP_algebra.DefaultEmbedding1D__get_as_binary(self)
8186 def _set_from_binary(self, p):
8187 r"""_set_from_binary(DefaultEmbedding1D self, PyObject * p)"""
8188 return _IMP_algebra.DefaultEmbedding1D__set_from_binary(self, p)
8190 def __getstate__(self):
8191 p = self._get_as_binary()
8192 if len(self.__dict__) > 1:
8193 d = self.__dict__.copy()
8198 def __setstate__(self, p):
8199 if not hasattr(self,
'this'):
8201 if isinstance(p, tuple):
8203 self.__dict__.update(d)
8204 return self._set_from_binary(p)
8206 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding1D
8209 _IMP_algebra.DefaultEmbedding1D_swigregister(DefaultEmbedding1D)
8210 class DefaultEmbedding2D(object):
8211 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 2 > class."""
8213 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8215 def __init__(self, *args):
8217 __init__(DefaultEmbedding2D self, Vector2D origin, Vector2D cell) -> DefaultEmbedding2D
8218 __init__(DefaultEmbedding2D self) -> DefaultEmbedding2D
8220 _IMP_algebra.DefaultEmbedding2D_swiginit(self, _IMP_algebra.new_DefaultEmbedding2D(*args))
8222 def set_origin(self, o):
8223 r"""set_origin(DefaultEmbedding2D self, Vector2D o)"""
8224 return _IMP_algebra.DefaultEmbedding2D_set_origin(self, o)
8226 def get_origin(self):
8227 r"""get_origin(DefaultEmbedding2D self) -> Vector2D"""
8228 return _IMP_algebra.DefaultEmbedding2D_get_origin(self)
8230 def get_dimension(self):
8231 r"""get_dimension(DefaultEmbedding2D self) -> unsigned int"""
8232 return _IMP_algebra.DefaultEmbedding2D_get_dimension(self)
8234 def set_unit_cell(self, o):
8235 r"""set_unit_cell(DefaultEmbedding2D self, Vector2D o)"""
8236 return _IMP_algebra.DefaultEmbedding2D_set_unit_cell(self, o)
8238 def get_inverse_unit_cell(self):
8239 r"""get_inverse_unit_cell(DefaultEmbedding2D self) -> Vector2D"""
8240 return _IMP_algebra.DefaultEmbedding2D_get_inverse_unit_cell(self)
8242 def get_unit_cell(self):
8243 r"""get_unit_cell(DefaultEmbedding2D self) -> Vector2D"""
8244 return _IMP_algebra.DefaultEmbedding2D_get_unit_cell(self)
8246 def get_extended_index(self, o):
8247 r"""get_extended_index(DefaultEmbedding2D self, Vector2D o) -> ExtendedGridIndex2D"""
8248 return _IMP_algebra.DefaultEmbedding2D_get_extended_index(self, o)
8251 r"""get_index(DefaultEmbedding2D self, Vector2D o) -> GridIndex2D"""
8252 return _IMP_algebra.DefaultEmbedding2D_get_index(self, o)
8254 def get_center(self, *args):
8256 get_center(DefaultEmbedding2D self, ExtendedGridIndex2D ei) -> Vector2D
8257 get_center(DefaultEmbedding2D self, GridIndex2D ei) -> Vector2D
8259 return _IMP_algebra.DefaultEmbedding2D_get_center(self, *args)
8261 def get_bounding_box(self, *args):
8263 get_bounding_box(DefaultEmbedding2D self, ExtendedGridIndex2D ei) -> BoundingBox2D
8264 get_bounding_box(DefaultEmbedding2D self, GridIndex2D ei) -> BoundingBox2D
8266 return _IMP_algebra.DefaultEmbedding2D_get_bounding_box(self, *args)
8268 def show(self, *args):
8269 r"""show(DefaultEmbedding2D self, _ostream out=std::cout)"""
8270 return _IMP_algebra.DefaultEmbedding2D_show(self, *args)
8273 r"""__str__(DefaultEmbedding2D self) -> std::string"""
8274 return _IMP_algebra.DefaultEmbedding2D___str__(self)
8277 r"""__repr__(DefaultEmbedding2D self) -> std::string"""
8278 return _IMP_algebra.DefaultEmbedding2D___repr__(self)
8280 def __cmp__(self, arg2):
8281 r"""__cmp__(DefaultEmbedding2D self, DefaultEmbedding2D arg2) -> int"""
8282 return _IMP_algebra.DefaultEmbedding2D___cmp__(self, arg2)
8284 def __eq__(self, arg2):
8285 r"""__eq__(DefaultEmbedding2D self, DefaultEmbedding2D arg2) -> bool"""
8286 return _IMP_algebra.DefaultEmbedding2D___eq__(self, arg2)
8288 def _get_as_binary(self):
8289 r"""_get_as_binary(DefaultEmbedding2D self) -> PyObject *"""
8290 return _IMP_algebra.DefaultEmbedding2D__get_as_binary(self)
8292 def _set_from_binary(self, p):
8293 r"""_set_from_binary(DefaultEmbedding2D self, PyObject * p)"""
8294 return _IMP_algebra.DefaultEmbedding2D__set_from_binary(self, p)
8296 def __getstate__(self):
8297 p = self._get_as_binary()
8298 if len(self.__dict__) > 1:
8299 d = self.__dict__.copy()
8304 def __setstate__(self, p):
8305 if not hasattr(self,
'this'):
8307 if isinstance(p, tuple):
8309 self.__dict__.update(d)
8310 return self._set_from_binary(p)
8312 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding2D
8315 _IMP_algebra.DefaultEmbedding2D_swigregister(DefaultEmbedding2D)
8316 class DefaultEmbedding3D(object):
8317 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 3 > class."""
8319 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8321 def __init__(self, *args):
8323 __init__(DefaultEmbedding3D self, Vector3D origin, Vector3D cell) -> DefaultEmbedding3D
8324 __init__(DefaultEmbedding3D self) -> DefaultEmbedding3D
8326 _IMP_algebra.DefaultEmbedding3D_swiginit(self, _IMP_algebra.new_DefaultEmbedding3D(*args))
8328 def set_origin(self, o):
8329 r"""set_origin(DefaultEmbedding3D self, Vector3D o)"""
8330 return _IMP_algebra.DefaultEmbedding3D_set_origin(self, o)
8332 def get_origin(self):
8333 r"""get_origin(DefaultEmbedding3D self) -> Vector3D"""
8334 return _IMP_algebra.DefaultEmbedding3D_get_origin(self)
8336 def get_dimension(self):
8337 r"""get_dimension(DefaultEmbedding3D self) -> unsigned int"""
8338 return _IMP_algebra.DefaultEmbedding3D_get_dimension(self)
8340 def set_unit_cell(self, o):
8341 r"""set_unit_cell(DefaultEmbedding3D self, Vector3D o)"""
8342 return _IMP_algebra.DefaultEmbedding3D_set_unit_cell(self, o)
8344 def get_inverse_unit_cell(self):
8345 r"""get_inverse_unit_cell(DefaultEmbedding3D self) -> Vector3D"""
8346 return _IMP_algebra.DefaultEmbedding3D_get_inverse_unit_cell(self)
8348 def get_unit_cell(self):
8349 r"""get_unit_cell(DefaultEmbedding3D self) -> Vector3D"""
8350 return _IMP_algebra.DefaultEmbedding3D_get_unit_cell(self)
8352 def get_extended_index(self, o):
8353 r"""get_extended_index(DefaultEmbedding3D self, Vector3D o) -> ExtendedGridIndex3D"""
8354 return _IMP_algebra.DefaultEmbedding3D_get_extended_index(self, o)
8357 r"""get_index(DefaultEmbedding3D self, Vector3D o) -> GridIndex3D"""
8358 return _IMP_algebra.DefaultEmbedding3D_get_index(self, o)
8360 def get_center(self, *args):
8362 get_center(DefaultEmbedding3D self, ExtendedGridIndex3D ei) -> Vector3D
8363 get_center(DefaultEmbedding3D self, GridIndex3D ei) -> Vector3D
8365 return _IMP_algebra.DefaultEmbedding3D_get_center(self, *args)
8367 def get_bounding_box(self, *args):
8369 get_bounding_box(DefaultEmbedding3D self, ExtendedGridIndex3D ei) -> BoundingBox3D
8370 get_bounding_box(DefaultEmbedding3D self, GridIndex3D ei) -> BoundingBox3D
8372 return _IMP_algebra.DefaultEmbedding3D_get_bounding_box(self, *args)
8374 def show(self, *args):
8375 r"""show(DefaultEmbedding3D self, _ostream out=std::cout)"""
8376 return _IMP_algebra.DefaultEmbedding3D_show(self, *args)
8379 r"""__str__(DefaultEmbedding3D self) -> std::string"""
8380 return _IMP_algebra.DefaultEmbedding3D___str__(self)
8383 r"""__repr__(DefaultEmbedding3D self) -> std::string"""
8384 return _IMP_algebra.DefaultEmbedding3D___repr__(self)
8386 def __cmp__(self, arg2):
8387 r"""__cmp__(DefaultEmbedding3D self, DefaultEmbedding3D arg2) -> int"""
8388 return _IMP_algebra.DefaultEmbedding3D___cmp__(self, arg2)
8390 def __eq__(self, arg2):
8391 r"""__eq__(DefaultEmbedding3D self, DefaultEmbedding3D arg2) -> bool"""
8392 return _IMP_algebra.DefaultEmbedding3D___eq__(self, arg2)
8394 def _get_as_binary(self):
8395 r"""_get_as_binary(DefaultEmbedding3D self) -> PyObject *"""
8396 return _IMP_algebra.DefaultEmbedding3D__get_as_binary(self)
8398 def _set_from_binary(self, p):
8399 r"""_set_from_binary(DefaultEmbedding3D self, PyObject * p)"""
8400 return _IMP_algebra.DefaultEmbedding3D__set_from_binary(self, p)
8402 def __getstate__(self):
8403 p = self._get_as_binary()
8404 if len(self.__dict__) > 1:
8405 d = self.__dict__.copy()
8410 def __setstate__(self, p):
8411 if not hasattr(self,
'this'):
8413 if isinstance(p, tuple):
8415 self.__dict__.update(d)
8416 return self._set_from_binary(p)
8418 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding3D
8421 _IMP_algebra.DefaultEmbedding3D_swigregister(DefaultEmbedding3D)
8422 class DefaultEmbedding4D(object):
8423 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 4 > class."""
8425 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8427 def __init__(self, *args):
8429 __init__(DefaultEmbedding4D self, Vector4D origin, Vector4D cell) -> DefaultEmbedding4D
8430 __init__(DefaultEmbedding4D self) -> DefaultEmbedding4D
8432 _IMP_algebra.DefaultEmbedding4D_swiginit(self, _IMP_algebra.new_DefaultEmbedding4D(*args))
8434 def set_origin(self, o):
8435 r"""set_origin(DefaultEmbedding4D self, Vector4D o)"""
8436 return _IMP_algebra.DefaultEmbedding4D_set_origin(self, o)
8438 def get_origin(self):
8439 r"""get_origin(DefaultEmbedding4D self) -> Vector4D"""
8440 return _IMP_algebra.DefaultEmbedding4D_get_origin(self)
8442 def get_dimension(self):
8443 r"""get_dimension(DefaultEmbedding4D self) -> unsigned int"""
8444 return _IMP_algebra.DefaultEmbedding4D_get_dimension(self)
8446 def set_unit_cell(self, o):
8447 r"""set_unit_cell(DefaultEmbedding4D self, Vector4D o)"""
8448 return _IMP_algebra.DefaultEmbedding4D_set_unit_cell(self, o)
8450 def get_inverse_unit_cell(self):
8451 r"""get_inverse_unit_cell(DefaultEmbedding4D self) -> Vector4D"""
8452 return _IMP_algebra.DefaultEmbedding4D_get_inverse_unit_cell(self)
8454 def get_unit_cell(self):
8455 r"""get_unit_cell(DefaultEmbedding4D self) -> Vector4D"""
8456 return _IMP_algebra.DefaultEmbedding4D_get_unit_cell(self)
8458 def get_extended_index(self, o):
8459 r"""get_extended_index(DefaultEmbedding4D self, Vector4D o) -> ExtendedGridIndex4D"""
8460 return _IMP_algebra.DefaultEmbedding4D_get_extended_index(self, o)
8463 r"""get_index(DefaultEmbedding4D self, Vector4D o) -> GridIndex4D"""
8464 return _IMP_algebra.DefaultEmbedding4D_get_index(self, o)
8466 def get_center(self, *args):
8468 get_center(DefaultEmbedding4D self, ExtendedGridIndex4D ei) -> Vector4D
8469 get_center(DefaultEmbedding4D self, GridIndex4D ei) -> Vector4D
8471 return _IMP_algebra.DefaultEmbedding4D_get_center(self, *args)
8473 def get_bounding_box(self, *args):
8475 get_bounding_box(DefaultEmbedding4D self, ExtendedGridIndex4D ei) -> BoundingBox4D
8476 get_bounding_box(DefaultEmbedding4D self, GridIndex4D ei) -> BoundingBox4D
8478 return _IMP_algebra.DefaultEmbedding4D_get_bounding_box(self, *args)
8480 def show(self, *args):
8481 r"""show(DefaultEmbedding4D self, _ostream out=std::cout)"""
8482 return _IMP_algebra.DefaultEmbedding4D_show(self, *args)
8485 r"""__str__(DefaultEmbedding4D self) -> std::string"""
8486 return _IMP_algebra.DefaultEmbedding4D___str__(self)
8489 r"""__repr__(DefaultEmbedding4D self) -> std::string"""
8490 return _IMP_algebra.DefaultEmbedding4D___repr__(self)
8492 def __cmp__(self, arg2):
8493 r"""__cmp__(DefaultEmbedding4D self, DefaultEmbedding4D arg2) -> int"""
8494 return _IMP_algebra.DefaultEmbedding4D___cmp__(self, arg2)
8496 def __eq__(self, arg2):
8497 r"""__eq__(DefaultEmbedding4D self, DefaultEmbedding4D arg2) -> bool"""
8498 return _IMP_algebra.DefaultEmbedding4D___eq__(self, arg2)
8500 def _get_as_binary(self):
8501 r"""_get_as_binary(DefaultEmbedding4D self) -> PyObject *"""
8502 return _IMP_algebra.DefaultEmbedding4D__get_as_binary(self)
8504 def _set_from_binary(self, p):
8505 r"""_set_from_binary(DefaultEmbedding4D self, PyObject * p)"""
8506 return _IMP_algebra.DefaultEmbedding4D__set_from_binary(self, p)
8508 def __getstate__(self):
8509 p = self._get_as_binary()
8510 if len(self.__dict__) > 1:
8511 d = self.__dict__.copy()
8516 def __setstate__(self, p):
8517 if not hasattr(self,
'this'):
8519 if isinstance(p, tuple):
8521 self.__dict__.update(d)
8522 return self._set_from_binary(p)
8524 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding4D
8527 _IMP_algebra.DefaultEmbedding4D_swigregister(DefaultEmbedding4D)
8528 class DefaultEmbedding5D(object):
8529 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 5 > class."""
8531 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8533 def __init__(self, *args):
8535 __init__(DefaultEmbedding5D self, Vector5D origin, Vector5D cell) -> DefaultEmbedding5D
8536 __init__(DefaultEmbedding5D self) -> DefaultEmbedding5D
8538 _IMP_algebra.DefaultEmbedding5D_swiginit(self, _IMP_algebra.new_DefaultEmbedding5D(*args))
8540 def set_origin(self, o):
8541 r"""set_origin(DefaultEmbedding5D self, Vector5D o)"""
8542 return _IMP_algebra.DefaultEmbedding5D_set_origin(self, o)
8544 def get_origin(self):
8545 r"""get_origin(DefaultEmbedding5D self) -> Vector5D"""
8546 return _IMP_algebra.DefaultEmbedding5D_get_origin(self)
8548 def get_dimension(self):
8549 r"""get_dimension(DefaultEmbedding5D self) -> unsigned int"""
8550 return _IMP_algebra.DefaultEmbedding5D_get_dimension(self)
8552 def set_unit_cell(self, o):
8553 r"""set_unit_cell(DefaultEmbedding5D self, Vector5D o)"""
8554 return _IMP_algebra.DefaultEmbedding5D_set_unit_cell(self, o)
8556 def get_inverse_unit_cell(self):
8557 r"""get_inverse_unit_cell(DefaultEmbedding5D self) -> Vector5D"""
8558 return _IMP_algebra.DefaultEmbedding5D_get_inverse_unit_cell(self)
8560 def get_unit_cell(self):
8561 r"""get_unit_cell(DefaultEmbedding5D self) -> Vector5D"""
8562 return _IMP_algebra.DefaultEmbedding5D_get_unit_cell(self)
8564 def get_extended_index(self, o):
8565 r"""get_extended_index(DefaultEmbedding5D self, Vector5D o) -> ExtendedGridIndex5D"""
8566 return _IMP_algebra.DefaultEmbedding5D_get_extended_index(self, o)
8569 r"""get_index(DefaultEmbedding5D self, Vector5D o) -> GridIndex5D"""
8570 return _IMP_algebra.DefaultEmbedding5D_get_index(self, o)
8572 def get_center(self, *args):
8574 get_center(DefaultEmbedding5D self, ExtendedGridIndex5D ei) -> Vector5D
8575 get_center(DefaultEmbedding5D self, GridIndex5D ei) -> Vector5D
8577 return _IMP_algebra.DefaultEmbedding5D_get_center(self, *args)
8579 def get_bounding_box(self, *args):
8581 get_bounding_box(DefaultEmbedding5D self, ExtendedGridIndex5D ei) -> BoundingBox5D
8582 get_bounding_box(DefaultEmbedding5D self, GridIndex5D ei) -> BoundingBox5D
8584 return _IMP_algebra.DefaultEmbedding5D_get_bounding_box(self, *args)
8586 def show(self, *args):
8587 r"""show(DefaultEmbedding5D self, _ostream out=std::cout)"""
8588 return _IMP_algebra.DefaultEmbedding5D_show(self, *args)
8591 r"""__str__(DefaultEmbedding5D self) -> std::string"""
8592 return _IMP_algebra.DefaultEmbedding5D___str__(self)
8595 r"""__repr__(DefaultEmbedding5D self) -> std::string"""
8596 return _IMP_algebra.DefaultEmbedding5D___repr__(self)
8598 def __cmp__(self, arg2):
8599 r"""__cmp__(DefaultEmbedding5D self, DefaultEmbedding5D arg2) -> int"""
8600 return _IMP_algebra.DefaultEmbedding5D___cmp__(self, arg2)
8602 def __eq__(self, arg2):
8603 r"""__eq__(DefaultEmbedding5D self, DefaultEmbedding5D arg2) -> bool"""
8604 return _IMP_algebra.DefaultEmbedding5D___eq__(self, arg2)
8606 def _get_as_binary(self):
8607 r"""_get_as_binary(DefaultEmbedding5D self) -> PyObject *"""
8608 return _IMP_algebra.DefaultEmbedding5D__get_as_binary(self)
8610 def _set_from_binary(self, p):
8611 r"""_set_from_binary(DefaultEmbedding5D self, PyObject * p)"""
8612 return _IMP_algebra.DefaultEmbedding5D__set_from_binary(self, p)
8614 def __getstate__(self):
8615 p = self._get_as_binary()
8616 if len(self.__dict__) > 1:
8617 d = self.__dict__.copy()
8622 def __setstate__(self, p):
8623 if not hasattr(self,
'this'):
8625 if isinstance(p, tuple):
8627 self.__dict__.update(d)
8628 return self._set_from_binary(p)
8630 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding5D
8633 _IMP_algebra.DefaultEmbedding5D_swigregister(DefaultEmbedding5D)
8634 class DefaultEmbedding6D(object):
8635 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< 6 > class."""
8637 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8639 def __init__(self, *args):
8641 __init__(DefaultEmbedding6D self, Vector6D origin, Vector6D cell) -> DefaultEmbedding6D
8642 __init__(DefaultEmbedding6D self) -> DefaultEmbedding6D
8644 _IMP_algebra.DefaultEmbedding6D_swiginit(self, _IMP_algebra.new_DefaultEmbedding6D(*args))
8646 def set_origin(self, o):
8647 r"""set_origin(DefaultEmbedding6D self, Vector6D o)"""
8648 return _IMP_algebra.DefaultEmbedding6D_set_origin(self, o)
8650 def get_origin(self):
8651 r"""get_origin(DefaultEmbedding6D self) -> Vector6D"""
8652 return _IMP_algebra.DefaultEmbedding6D_get_origin(self)
8654 def get_dimension(self):
8655 r"""get_dimension(DefaultEmbedding6D self) -> unsigned int"""
8656 return _IMP_algebra.DefaultEmbedding6D_get_dimension(self)
8658 def set_unit_cell(self, o):
8659 r"""set_unit_cell(DefaultEmbedding6D self, Vector6D o)"""
8660 return _IMP_algebra.DefaultEmbedding6D_set_unit_cell(self, o)
8662 def get_inverse_unit_cell(self):
8663 r"""get_inverse_unit_cell(DefaultEmbedding6D self) -> Vector6D"""
8664 return _IMP_algebra.DefaultEmbedding6D_get_inverse_unit_cell(self)
8666 def get_unit_cell(self):
8667 r"""get_unit_cell(DefaultEmbedding6D self) -> Vector6D"""
8668 return _IMP_algebra.DefaultEmbedding6D_get_unit_cell(self)
8670 def get_extended_index(self, o):
8671 r"""get_extended_index(DefaultEmbedding6D self, Vector6D o) -> ExtendedGridIndex6D"""
8672 return _IMP_algebra.DefaultEmbedding6D_get_extended_index(self, o)
8675 r"""get_index(DefaultEmbedding6D self, Vector6D o) -> GridIndex6D"""
8676 return _IMP_algebra.DefaultEmbedding6D_get_index(self, o)
8678 def get_center(self, *args):
8680 get_center(DefaultEmbedding6D self, ExtendedGridIndex6D ei) -> Vector6D
8681 get_center(DefaultEmbedding6D self, GridIndex6D ei) -> Vector6D
8683 return _IMP_algebra.DefaultEmbedding6D_get_center(self, *args)
8685 def get_bounding_box(self, *args):
8687 get_bounding_box(DefaultEmbedding6D self, ExtendedGridIndex6D ei) -> BoundingBox6D
8688 get_bounding_box(DefaultEmbedding6D self, GridIndex6D ei) -> BoundingBox6D
8690 return _IMP_algebra.DefaultEmbedding6D_get_bounding_box(self, *args)
8692 def show(self, *args):
8693 r"""show(DefaultEmbedding6D self, _ostream out=std::cout)"""
8694 return _IMP_algebra.DefaultEmbedding6D_show(self, *args)
8697 r"""__str__(DefaultEmbedding6D self) -> std::string"""
8698 return _IMP_algebra.DefaultEmbedding6D___str__(self)
8701 r"""__repr__(DefaultEmbedding6D self) -> std::string"""
8702 return _IMP_algebra.DefaultEmbedding6D___repr__(self)
8704 def __cmp__(self, arg2):
8705 r"""__cmp__(DefaultEmbedding6D self, DefaultEmbedding6D arg2) -> int"""
8706 return _IMP_algebra.DefaultEmbedding6D___cmp__(self, arg2)
8708 def __eq__(self, arg2):
8709 r"""__eq__(DefaultEmbedding6D self, DefaultEmbedding6D arg2) -> bool"""
8710 return _IMP_algebra.DefaultEmbedding6D___eq__(self, arg2)
8712 def _get_as_binary(self):
8713 r"""_get_as_binary(DefaultEmbedding6D self) -> PyObject *"""
8714 return _IMP_algebra.DefaultEmbedding6D__get_as_binary(self)
8716 def _set_from_binary(self, p):
8717 r"""_set_from_binary(DefaultEmbedding6D self, PyObject * p)"""
8718 return _IMP_algebra.DefaultEmbedding6D__set_from_binary(self, p)
8720 def __getstate__(self):
8721 p = self._get_as_binary()
8722 if len(self.__dict__) > 1:
8723 d = self.__dict__.copy()
8728 def __setstate__(self, p):
8729 if not hasattr(self,
'this'):
8731 if isinstance(p, tuple):
8733 self.__dict__.update(d)
8734 return self._set_from_binary(p)
8736 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbedding6D
8739 _IMP_algebra.DefaultEmbedding6D_swigregister(DefaultEmbedding6D)
8740 class DefaultEmbeddingKD(object):
8741 r"""Proxy of C++ IMP::algebra::DefaultEmbeddingD< -1 > class."""
8743 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8745 def __init__(self, *args):
8747 __init__(DefaultEmbeddingKD self, VectorKD origin, VectorKD cell) -> DefaultEmbeddingKD
8748 __init__(DefaultEmbeddingKD self) -> DefaultEmbeddingKD
8750 _IMP_algebra.DefaultEmbeddingKD_swiginit(self, _IMP_algebra.new_DefaultEmbeddingKD(*args))
8752 def set_origin(self, o):
8753 r"""set_origin(DefaultEmbeddingKD self, VectorKD o)"""
8754 return _IMP_algebra.DefaultEmbeddingKD_set_origin(self, o)
8756 def get_origin(self):
8757 r"""get_origin(DefaultEmbeddingKD self) -> VectorKD"""
8758 return _IMP_algebra.DefaultEmbeddingKD_get_origin(self)
8760 def get_dimension(self):
8761 r"""get_dimension(DefaultEmbeddingKD self) -> unsigned int"""
8762 return _IMP_algebra.DefaultEmbeddingKD_get_dimension(self)
8764 def set_unit_cell(self, o):
8765 r"""set_unit_cell(DefaultEmbeddingKD self, VectorKD o)"""
8766 return _IMP_algebra.DefaultEmbeddingKD_set_unit_cell(self, o)
8768 def get_inverse_unit_cell(self):
8769 r"""get_inverse_unit_cell(DefaultEmbeddingKD self) -> VectorKD"""
8770 return _IMP_algebra.DefaultEmbeddingKD_get_inverse_unit_cell(self)
8772 def get_unit_cell(self):
8773 r"""get_unit_cell(DefaultEmbeddingKD self) -> VectorKD"""
8774 return _IMP_algebra.DefaultEmbeddingKD_get_unit_cell(self)
8776 def get_extended_index(self, o):
8777 r"""get_extended_index(DefaultEmbeddingKD self, VectorKD o) -> ExtendedGridIndexKD"""
8778 return _IMP_algebra.DefaultEmbeddingKD_get_extended_index(self, o)
8781 r"""get_index(DefaultEmbeddingKD self, VectorKD o) -> GridIndexKD"""
8782 return _IMP_algebra.DefaultEmbeddingKD_get_index(self, o)
8784 def get_center(self, *args):
8786 get_center(DefaultEmbeddingKD self, ExtendedGridIndexKD ei) -> VectorKD
8787 get_center(DefaultEmbeddingKD self, GridIndexKD ei) -> VectorKD
8789 return _IMP_algebra.DefaultEmbeddingKD_get_center(self, *args)
8791 def get_bounding_box(self, *args):
8793 get_bounding_box(DefaultEmbeddingKD self, ExtendedGridIndexKD ei) -> BoundingBoxKD
8794 get_bounding_box(DefaultEmbeddingKD self, GridIndexKD ei) -> BoundingBoxKD
8796 return _IMP_algebra.DefaultEmbeddingKD_get_bounding_box(self, *args)
8798 def show(self, *args):
8799 r"""show(DefaultEmbeddingKD self, _ostream out=std::cout)"""
8800 return _IMP_algebra.DefaultEmbeddingKD_show(self, *args)
8803 r"""__str__(DefaultEmbeddingKD self) -> std::string"""
8804 return _IMP_algebra.DefaultEmbeddingKD___str__(self)
8807 r"""__repr__(DefaultEmbeddingKD self) -> std::string"""
8808 return _IMP_algebra.DefaultEmbeddingKD___repr__(self)
8810 def __cmp__(self, arg2):
8811 r"""__cmp__(DefaultEmbeddingKD self, DefaultEmbeddingKD arg2) -> int"""
8812 return _IMP_algebra.DefaultEmbeddingKD___cmp__(self, arg2)
8814 def __eq__(self, arg2):
8815 r"""__eq__(DefaultEmbeddingKD self, DefaultEmbeddingKD arg2) -> bool"""
8816 return _IMP_algebra.DefaultEmbeddingKD___eq__(self, arg2)
8818 def _get_as_binary(self):
8819 r"""_get_as_binary(DefaultEmbeddingKD self) -> PyObject *"""
8820 return _IMP_algebra.DefaultEmbeddingKD__get_as_binary(self)
8822 def _set_from_binary(self, p):
8823 r"""_set_from_binary(DefaultEmbeddingKD self, PyObject * p)"""
8824 return _IMP_algebra.DefaultEmbeddingKD__set_from_binary(self, p)
8826 def __getstate__(self):
8827 p = self._get_as_binary()
8828 if len(self.__dict__) > 1:
8829 d = self.__dict__.copy()
8834 def __setstate__(self, p):
8835 if not hasattr(self,
'this'):
8837 if isinstance(p, tuple):
8839 self.__dict__.update(d)
8840 return self._set_from_binary(p)
8842 __swig_destroy__ = _IMP_algebra.delete_DefaultEmbeddingKD
8845 _IMP_algebra.DefaultEmbeddingKD_swigregister(DefaultEmbeddingKD)
8846 class LogEmbedding1D(object):
8847 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 1 > class."""
8849 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8851 def __init__(self, *args):
8853 __init__(LogEmbedding1D self, Vector1D origin, Vector1D cell, Vector1D base) -> LogEmbedding1D
8854 __init__(LogEmbedding1D self, BoundingBox1D bb, Vector1D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding1D
8855 __init__(LogEmbedding1D self, Vector1D arg2, Vector1D arg3) -> LogEmbedding1D
8856 __init__(LogEmbedding1D self) -> LogEmbedding1D
8858 _IMP_algebra.LogEmbedding1D_swiginit(self, _IMP_algebra.new_LogEmbedding1D(*args))
8860 def set_origin(self, o):
8861 r"""set_origin(LogEmbedding1D self, Vector1D o)"""
8862 return _IMP_algebra.LogEmbedding1D_set_origin(self, o)
8864 def get_origin(self):
8865 r"""get_origin(LogEmbedding1D self) -> Vector1D"""
8866 return _IMP_algebra.LogEmbedding1D_get_origin(self)
8868 def get_dimension(self):
8869 r"""get_dimension(LogEmbedding1D self) -> unsigned int"""
8870 return _IMP_algebra.LogEmbedding1D_get_dimension(self)
8872 def set_unit_cell(self, *args):
8874 set_unit_cell(LogEmbedding1D self, Vector1D o, Vector1D base)
8875 set_unit_cell(LogEmbedding1D self, Vector1D o)
8877 return _IMP_algebra.LogEmbedding1D_set_unit_cell(self, *args)
8879 def get_unit_cell(self):
8880 r"""get_unit_cell(LogEmbedding1D self) -> Vector1D"""
8881 return _IMP_algebra.LogEmbedding1D_get_unit_cell(self)
8883 def get_extended_index(self, o):
8884 r"""get_extended_index(LogEmbedding1D self, Vector1D o) -> ExtendedGridIndex1D"""
8885 return _IMP_algebra.LogEmbedding1D_get_extended_index(self, o)
8888 r"""get_index(LogEmbedding1D self, Vector1D o) -> GridIndex1D"""
8889 return _IMP_algebra.LogEmbedding1D_get_index(self, o)
8891 def get_center(self, *args):
8893 get_center(LogEmbedding1D self, ExtendedGridIndex1D ei) -> Vector1D
8894 get_center(LogEmbedding1D self, GridIndex1D ei) -> Vector1D
8896 return _IMP_algebra.LogEmbedding1D_get_center(self, *args)
8898 def get_bounding_box(self, *args):
8900 get_bounding_box(LogEmbedding1D self, ExtendedGridIndex1D ei) -> BoundingBox1D
8901 get_bounding_box(LogEmbedding1D self, GridIndex1D ei) -> BoundingBox1D
8903 return _IMP_algebra.LogEmbedding1D_get_bounding_box(self, *args)
8905 def show(self, *args):
8906 r"""show(LogEmbedding1D self, _ostream out=std::cout)"""
8907 return _IMP_algebra.LogEmbedding1D_show(self, *args)
8910 r"""__str__(LogEmbedding1D self) -> std::string"""
8911 return _IMP_algebra.LogEmbedding1D___str__(self)
8914 r"""__repr__(LogEmbedding1D self) -> std::string"""
8915 return _IMP_algebra.LogEmbedding1D___repr__(self)
8917 def __cmp__(self, arg2):
8918 r"""__cmp__(LogEmbedding1D self, LogEmbedding1D arg2) -> int"""
8919 return _IMP_algebra.LogEmbedding1D___cmp__(self, arg2)
8921 def __eq__(self, arg2):
8922 r"""__eq__(LogEmbedding1D self, LogEmbedding1D arg2) -> bool"""
8923 return _IMP_algebra.LogEmbedding1D___eq__(self, arg2)
8925 def _get_as_binary(self):
8926 r"""_get_as_binary(LogEmbedding1D self) -> PyObject *"""
8927 return _IMP_algebra.LogEmbedding1D__get_as_binary(self)
8929 def _set_from_binary(self, p):
8930 r"""_set_from_binary(LogEmbedding1D self, PyObject * p)"""
8931 return _IMP_algebra.LogEmbedding1D__set_from_binary(self, p)
8933 def __getstate__(self):
8934 p = self._get_as_binary()
8935 if len(self.__dict__) > 1:
8936 d = self.__dict__.copy()
8941 def __setstate__(self, p):
8942 if not hasattr(self,
'this'):
8944 if isinstance(p, tuple):
8946 self.__dict__.update(d)
8947 return self._set_from_binary(p)
8949 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding1D
8952 _IMP_algebra.LogEmbedding1D_swigregister(LogEmbedding1D)
8953 class LogEmbedding2D(object):
8954 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 2 > class."""
8956 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
8958 def __init__(self, *args):
8960 __init__(LogEmbedding2D self, Vector2D origin, Vector2D cell, Vector2D base) -> LogEmbedding2D
8961 __init__(LogEmbedding2D self, BoundingBox2D bb, Vector2D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding2D
8962 __init__(LogEmbedding2D self, Vector2D arg2, Vector2D arg3) -> LogEmbedding2D
8963 __init__(LogEmbedding2D self) -> LogEmbedding2D
8965 _IMP_algebra.LogEmbedding2D_swiginit(self, _IMP_algebra.new_LogEmbedding2D(*args))
8967 def set_origin(self, o):
8968 r"""set_origin(LogEmbedding2D self, Vector2D o)"""
8969 return _IMP_algebra.LogEmbedding2D_set_origin(self, o)
8971 def get_origin(self):
8972 r"""get_origin(LogEmbedding2D self) -> Vector2D"""
8973 return _IMP_algebra.LogEmbedding2D_get_origin(self)
8975 def get_dimension(self):
8976 r"""get_dimension(LogEmbedding2D self) -> unsigned int"""
8977 return _IMP_algebra.LogEmbedding2D_get_dimension(self)
8979 def set_unit_cell(self, *args):
8981 set_unit_cell(LogEmbedding2D self, Vector2D o, Vector2D base)
8982 set_unit_cell(LogEmbedding2D self, Vector2D o)
8984 return _IMP_algebra.LogEmbedding2D_set_unit_cell(self, *args)
8986 def get_unit_cell(self):
8987 r"""get_unit_cell(LogEmbedding2D self) -> Vector2D"""
8988 return _IMP_algebra.LogEmbedding2D_get_unit_cell(self)
8990 def get_extended_index(self, o):
8991 r"""get_extended_index(LogEmbedding2D self, Vector2D o) -> ExtendedGridIndex2D"""
8992 return _IMP_algebra.LogEmbedding2D_get_extended_index(self, o)
8995 r"""get_index(LogEmbedding2D self, Vector2D o) -> GridIndex2D"""
8996 return _IMP_algebra.LogEmbedding2D_get_index(self, o)
8998 def get_center(self, *args):
9000 get_center(LogEmbedding2D self, ExtendedGridIndex2D ei) -> Vector2D
9001 get_center(LogEmbedding2D self, GridIndex2D ei) -> Vector2D
9003 return _IMP_algebra.LogEmbedding2D_get_center(self, *args)
9005 def get_bounding_box(self, *args):
9007 get_bounding_box(LogEmbedding2D self, ExtendedGridIndex2D ei) -> BoundingBox2D
9008 get_bounding_box(LogEmbedding2D self, GridIndex2D ei) -> BoundingBox2D
9010 return _IMP_algebra.LogEmbedding2D_get_bounding_box(self, *args)
9012 def show(self, *args):
9013 r"""show(LogEmbedding2D self, _ostream out=std::cout)"""
9014 return _IMP_algebra.LogEmbedding2D_show(self, *args)
9017 r"""__str__(LogEmbedding2D self) -> std::string"""
9018 return _IMP_algebra.LogEmbedding2D___str__(self)
9021 r"""__repr__(LogEmbedding2D self) -> std::string"""
9022 return _IMP_algebra.LogEmbedding2D___repr__(self)
9024 def __cmp__(self, arg2):
9025 r"""__cmp__(LogEmbedding2D self, LogEmbedding2D arg2) -> int"""
9026 return _IMP_algebra.LogEmbedding2D___cmp__(self, arg2)
9028 def __eq__(self, arg2):
9029 r"""__eq__(LogEmbedding2D self, LogEmbedding2D arg2) -> bool"""
9030 return _IMP_algebra.LogEmbedding2D___eq__(self, arg2)
9032 def _get_as_binary(self):
9033 r"""_get_as_binary(LogEmbedding2D self) -> PyObject *"""
9034 return _IMP_algebra.LogEmbedding2D__get_as_binary(self)
9036 def _set_from_binary(self, p):
9037 r"""_set_from_binary(LogEmbedding2D self, PyObject * p)"""
9038 return _IMP_algebra.LogEmbedding2D__set_from_binary(self, p)
9040 def __getstate__(self):
9041 p = self._get_as_binary()
9042 if len(self.__dict__) > 1:
9043 d = self.__dict__.copy()
9048 def __setstate__(self, p):
9049 if not hasattr(self,
'this'):
9051 if isinstance(p, tuple):
9053 self.__dict__.update(d)
9054 return self._set_from_binary(p)
9056 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding2D
9059 _IMP_algebra.LogEmbedding2D_swigregister(LogEmbedding2D)
9060 class LogEmbedding4D(object):
9061 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 4 > class."""
9063 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9065 def __init__(self, *args):
9067 __init__(LogEmbedding4D self, Vector4D origin, Vector4D cell, Vector4D base) -> LogEmbedding4D
9068 __init__(LogEmbedding4D self, BoundingBox4D bb, Vector4D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding4D
9069 __init__(LogEmbedding4D self, Vector4D arg2, Vector4D arg3) -> LogEmbedding4D
9070 __init__(LogEmbedding4D self) -> LogEmbedding4D
9072 _IMP_algebra.LogEmbedding4D_swiginit(self, _IMP_algebra.new_LogEmbedding4D(*args))
9074 def set_origin(self, o):
9075 r"""set_origin(LogEmbedding4D self, Vector4D o)"""
9076 return _IMP_algebra.LogEmbedding4D_set_origin(self, o)
9078 def get_origin(self):
9079 r"""get_origin(LogEmbedding4D self) -> Vector4D"""
9080 return _IMP_algebra.LogEmbedding4D_get_origin(self)
9082 def get_dimension(self):
9083 r"""get_dimension(LogEmbedding4D self) -> unsigned int"""
9084 return _IMP_algebra.LogEmbedding4D_get_dimension(self)
9086 def set_unit_cell(self, *args):
9088 set_unit_cell(LogEmbedding4D self, Vector4D o, Vector4D base)
9089 set_unit_cell(LogEmbedding4D self, Vector4D o)
9091 return _IMP_algebra.LogEmbedding4D_set_unit_cell(self, *args)
9093 def get_unit_cell(self):
9094 r"""get_unit_cell(LogEmbedding4D self) -> Vector4D"""
9095 return _IMP_algebra.LogEmbedding4D_get_unit_cell(self)
9097 def get_extended_index(self, o):
9098 r"""get_extended_index(LogEmbedding4D self, Vector4D o) -> ExtendedGridIndex4D"""
9099 return _IMP_algebra.LogEmbedding4D_get_extended_index(self, o)
9102 r"""get_index(LogEmbedding4D self, Vector4D o) -> GridIndex4D"""
9103 return _IMP_algebra.LogEmbedding4D_get_index(self, o)
9105 def get_center(self, *args):
9107 get_center(LogEmbedding4D self, ExtendedGridIndex4D ei) -> Vector4D
9108 get_center(LogEmbedding4D self, GridIndex4D ei) -> Vector4D
9110 return _IMP_algebra.LogEmbedding4D_get_center(self, *args)
9112 def get_bounding_box(self, *args):
9114 get_bounding_box(LogEmbedding4D self, ExtendedGridIndex4D ei) -> BoundingBox4D
9115 get_bounding_box(LogEmbedding4D self, GridIndex4D ei) -> BoundingBox4D
9117 return _IMP_algebra.LogEmbedding4D_get_bounding_box(self, *args)
9119 def show(self, *args):
9120 r"""show(LogEmbedding4D self, _ostream out=std::cout)"""
9121 return _IMP_algebra.LogEmbedding4D_show(self, *args)
9124 r"""__str__(LogEmbedding4D self) -> std::string"""
9125 return _IMP_algebra.LogEmbedding4D___str__(self)
9128 r"""__repr__(LogEmbedding4D self) -> std::string"""
9129 return _IMP_algebra.LogEmbedding4D___repr__(self)
9131 def __cmp__(self, arg2):
9132 r"""__cmp__(LogEmbedding4D self, LogEmbedding4D arg2) -> int"""
9133 return _IMP_algebra.LogEmbedding4D___cmp__(self, arg2)
9135 def __eq__(self, arg2):
9136 r"""__eq__(LogEmbedding4D self, LogEmbedding4D arg2) -> bool"""
9137 return _IMP_algebra.LogEmbedding4D___eq__(self, arg2)
9139 def _get_as_binary(self):
9140 r"""_get_as_binary(LogEmbedding4D self) -> PyObject *"""
9141 return _IMP_algebra.LogEmbedding4D__get_as_binary(self)
9143 def _set_from_binary(self, p):
9144 r"""_set_from_binary(LogEmbedding4D self, PyObject * p)"""
9145 return _IMP_algebra.LogEmbedding4D__set_from_binary(self, p)
9147 def __getstate__(self):
9148 p = self._get_as_binary()
9149 if len(self.__dict__) > 1:
9150 d = self.__dict__.copy()
9155 def __setstate__(self, p):
9156 if not hasattr(self,
'this'):
9158 if isinstance(p, tuple):
9160 self.__dict__.update(d)
9161 return self._set_from_binary(p)
9163 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding4D
9166 _IMP_algebra.LogEmbedding4D_swigregister(LogEmbedding4D)
9167 class LogEmbedding5D(object):
9168 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 5 > class."""
9170 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9172 def __init__(self, *args):
9174 __init__(LogEmbedding5D self, Vector5D origin, Vector5D cell, Vector5D base) -> LogEmbedding5D
9175 __init__(LogEmbedding5D self, BoundingBox5D bb, Vector5D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding5D
9176 __init__(LogEmbedding5D self, Vector5D arg2, Vector5D arg3) -> LogEmbedding5D
9177 __init__(LogEmbedding5D self) -> LogEmbedding5D
9179 _IMP_algebra.LogEmbedding5D_swiginit(self, _IMP_algebra.new_LogEmbedding5D(*args))
9181 def set_origin(self, o):
9182 r"""set_origin(LogEmbedding5D self, Vector5D o)"""
9183 return _IMP_algebra.LogEmbedding5D_set_origin(self, o)
9185 def get_origin(self):
9186 r"""get_origin(LogEmbedding5D self) -> Vector5D"""
9187 return _IMP_algebra.LogEmbedding5D_get_origin(self)
9189 def get_dimension(self):
9190 r"""get_dimension(LogEmbedding5D self) -> unsigned int"""
9191 return _IMP_algebra.LogEmbedding5D_get_dimension(self)
9193 def set_unit_cell(self, *args):
9195 set_unit_cell(LogEmbedding5D self, Vector5D o, Vector5D base)
9196 set_unit_cell(LogEmbedding5D self, Vector5D o)
9198 return _IMP_algebra.LogEmbedding5D_set_unit_cell(self, *args)
9200 def get_unit_cell(self):
9201 r"""get_unit_cell(LogEmbedding5D self) -> Vector5D"""
9202 return _IMP_algebra.LogEmbedding5D_get_unit_cell(self)
9204 def get_extended_index(self, o):
9205 r"""get_extended_index(LogEmbedding5D self, Vector5D o) -> ExtendedGridIndex5D"""
9206 return _IMP_algebra.LogEmbedding5D_get_extended_index(self, o)
9209 r"""get_index(LogEmbedding5D self, Vector5D o) -> GridIndex5D"""
9210 return _IMP_algebra.LogEmbedding5D_get_index(self, o)
9212 def get_center(self, *args):
9214 get_center(LogEmbedding5D self, ExtendedGridIndex5D ei) -> Vector5D
9215 get_center(LogEmbedding5D self, GridIndex5D ei) -> Vector5D
9217 return _IMP_algebra.LogEmbedding5D_get_center(self, *args)
9219 def get_bounding_box(self, *args):
9221 get_bounding_box(LogEmbedding5D self, ExtendedGridIndex5D ei) -> BoundingBox5D
9222 get_bounding_box(LogEmbedding5D self, GridIndex5D ei) -> BoundingBox5D
9224 return _IMP_algebra.LogEmbedding5D_get_bounding_box(self, *args)
9226 def show(self, *args):
9227 r"""show(LogEmbedding5D self, _ostream out=std::cout)"""
9228 return _IMP_algebra.LogEmbedding5D_show(self, *args)
9231 r"""__str__(LogEmbedding5D self) -> std::string"""
9232 return _IMP_algebra.LogEmbedding5D___str__(self)
9235 r"""__repr__(LogEmbedding5D self) -> std::string"""
9236 return _IMP_algebra.LogEmbedding5D___repr__(self)
9238 def __cmp__(self, arg2):
9239 r"""__cmp__(LogEmbedding5D self, LogEmbedding5D arg2) -> int"""
9240 return _IMP_algebra.LogEmbedding5D___cmp__(self, arg2)
9242 def __eq__(self, arg2):
9243 r"""__eq__(LogEmbedding5D self, LogEmbedding5D arg2) -> bool"""
9244 return _IMP_algebra.LogEmbedding5D___eq__(self, arg2)
9246 def _get_as_binary(self):
9247 r"""_get_as_binary(LogEmbedding5D self) -> PyObject *"""
9248 return _IMP_algebra.LogEmbedding5D__get_as_binary(self)
9250 def _set_from_binary(self, p):
9251 r"""_set_from_binary(LogEmbedding5D self, PyObject * p)"""
9252 return _IMP_algebra.LogEmbedding5D__set_from_binary(self, p)
9254 def __getstate__(self):
9255 p = self._get_as_binary()
9256 if len(self.__dict__) > 1:
9257 d = self.__dict__.copy()
9262 def __setstate__(self, p):
9263 if not hasattr(self,
'this'):
9265 if isinstance(p, tuple):
9267 self.__dict__.update(d)
9268 return self._set_from_binary(p)
9270 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding5D
9273 _IMP_algebra.LogEmbedding5D_swigregister(LogEmbedding5D)
9274 class LogEmbedding6D(object):
9275 r"""Proxy of C++ IMP::algebra::LogEmbeddingD< 6 > class."""
9277 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9279 def __init__(self, *args):
9281 __init__(LogEmbedding6D self, Vector6D origin, Vector6D cell, Vector6D base) -> LogEmbedding6D
9282 __init__(LogEmbedding6D self, BoundingBox6D bb, Vector6D bases, IMP::Ints const & counts, bool bound_centers=False) -> LogEmbedding6D
9283 __init__(LogEmbedding6D self, Vector6D arg2, Vector6D arg3) -> LogEmbedding6D
9284 __init__(LogEmbedding6D self) -> LogEmbedding6D
9286 _IMP_algebra.LogEmbedding6D_swiginit(self, _IMP_algebra.new_LogEmbedding6D(*args))
9288 def set_origin(self, o):
9289 r"""set_origin(LogEmbedding6D self, Vector6D o)"""
9290 return _IMP_algebra.LogEmbedding6D_set_origin(self, o)
9292 def get_origin(self):
9293 r"""get_origin(LogEmbedding6D self) -> Vector6D"""
9294 return _IMP_algebra.LogEmbedding6D_get_origin(self)
9296 def get_dimension(self):
9297 r"""get_dimension(LogEmbedding6D self) -> unsigned int"""
9298 return _IMP_algebra.LogEmbedding6D_get_dimension(self)
9300 def set_unit_cell(self, *args):
9302 set_unit_cell(LogEmbedding6D self, Vector6D o, Vector6D base)
9303 set_unit_cell(LogEmbedding6D self, Vector6D o)
9305 return _IMP_algebra.LogEmbedding6D_set_unit_cell(self, *args)
9307 def get_unit_cell(self):
9308 r"""get_unit_cell(LogEmbedding6D self) -> Vector6D"""
9309 return _IMP_algebra.LogEmbedding6D_get_unit_cell(self)
9311 def get_extended_index(self, o):
9312 r"""get_extended_index(LogEmbedding6D self, Vector6D o) -> ExtendedGridIndex6D"""
9313 return _IMP_algebra.LogEmbedding6D_get_extended_index(self, o)
9316 r"""get_index(LogEmbedding6D self, Vector6D o) -> GridIndex6D"""
9317 return _IMP_algebra.LogEmbedding6D_get_index(self, o)
9319 def get_center(self, *args):
9321 get_center(LogEmbedding6D self, ExtendedGridIndex6D ei) -> Vector6D
9322 get_center(LogEmbedding6D self, GridIndex6D ei) -> Vector6D
9324 return _IMP_algebra.LogEmbedding6D_get_center(self, *args)
9326 def get_bounding_box(self, *args):
9328 get_bounding_box(LogEmbedding6D self, ExtendedGridIndex6D ei) -> BoundingBox6D
9329 get_bounding_box(LogEmbedding6D self, GridIndex6D ei) -> BoundingBox6D
9331 return _IMP_algebra.LogEmbedding6D_get_bounding_box(self, *args)
9333 def show(self, *args):
9334 r"""show(LogEmbedding6D self, _ostream out=std::cout)"""
9335 return _IMP_algebra.LogEmbedding6D_show(self, *args)
9338 r"""__str__(LogEmbedding6D self) -> std::string"""
9339 return _IMP_algebra.LogEmbedding6D___str__(self)
9342 r"""__repr__(LogEmbedding6D self) -> std::string"""
9343 return _IMP_algebra.LogEmbedding6D___repr__(self)
9345 def __cmp__(self, arg2):
9346 r"""__cmp__(LogEmbedding6D self, LogEmbedding6D arg2) -> int"""
9347 return _IMP_algebra.LogEmbedding6D___cmp__(self, arg2)
9349 def __eq__(self, arg2):
9350 r"""__eq__(LogEmbedding6D self, LogEmbedding6D arg2) -> bool"""
9351 return _IMP_algebra.LogEmbedding6D___eq__(self, arg2)
9353 def _get_as_binary(self):
9354 r"""_get_as_binary(LogEmbedding6D self) -> PyObject *"""
9355 return _IMP_algebra.LogEmbedding6D__get_as_binary(self)
9357 def _set_from_binary(self, p):
9358 r"""_set_from_binary(LogEmbedding6D self, PyObject * p)"""
9359 return _IMP_algebra.LogEmbedding6D__set_from_binary(self, p)
9361 def __getstate__(self):
9362 p = self._get_as_binary()
9363 if len(self.__dict__) > 1:
9364 d = self.__dict__.copy()
9369 def __setstate__(self, p):
9370 if not hasattr(self,
'this'):
9372 if isinstance(p, tuple):
9374 self.__dict__.update(d)
9375 return self._set_from_binary(p)
9377 __swig_destroy__ = _IMP_algebra.delete_LogEmbedding6D
9380 _IMP_algebra.LogEmbedding6D_swigregister(LogEmbedding6D)
9381 class SpherePatch3D(IMP._GeometricPrimitive3D):
9382 r"""Proxy of C++ IMP::algebra::SpherePatch3D class."""
9384 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9386 def __init__(self, *args):
9388 __init__(SpherePatch3D self) -> SpherePatch3D
9389 __init__(SpherePatch3D self, Sphere3D sph, Plane3D crossing_plane) -> SpherePatch3D
9391 _IMP_algebra.SpherePatch3D_swiginit(self, _IMP_algebra.new_SpherePatch3D(*args))
9393 def get_contains(self, p):
9394 r"""get_contains(SpherePatch3D self, Vector3D p) -> bool"""
9395 return _IMP_algebra.SpherePatch3D_get_contains(self, p)
9397 def get_plane(self):
9398 r"""get_plane(SpherePatch3D self) -> Plane3D"""
9399 return _IMP_algebra.SpherePatch3D_get_plane(self)
9401 def get_sphere(self):
9402 r"""get_sphere(SpherePatch3D self) -> Sphere3D"""
9403 return _IMP_algebra.SpherePatch3D_get_sphere(self)
9405 def show(self, *args):
9406 r"""show(SpherePatch3D self, _ostream out=std::cout)"""
9407 return _IMP_algebra.SpherePatch3D_show(self, *args)
9409 def get_boundary_point(self):
9410 r"""get_boundary_point(SpherePatch3D self) -> Vector3D"""
9411 return _IMP_algebra.SpherePatch3D_get_boundary_point(self)
9414 r"""__str__(SpherePatch3D self) -> std::string"""
9415 return _IMP_algebra.SpherePatch3D___str__(self)
9418 r"""__repr__(SpherePatch3D self) -> std::string"""
9419 return _IMP_algebra.SpherePatch3D___repr__(self)
9421 def _get_as_binary(self):
9422 r"""_get_as_binary(SpherePatch3D self) -> PyObject *"""
9423 return _IMP_algebra.SpherePatch3D__get_as_binary(self)
9425 def _set_from_binary(self, p):
9426 r"""_set_from_binary(SpherePatch3D self, PyObject * p)"""
9427 return _IMP_algebra.SpherePatch3D__set_from_binary(self, p)
9429 def __getstate__(self):
9430 p = self._get_as_binary()
9431 if len(self.__dict__) > 1:
9432 d = self.__dict__.copy()
9437 def __setstate__(self, p):
9438 if not hasattr(self,
'this'):
9440 if isinstance(p, tuple):
9442 self.__dict__.update(d)
9443 return self._set_from_binary(p)
9445 __swig_destroy__ = _IMP_algebra.delete_SpherePatch3D
9448 _IMP_algebra.SpherePatch3D_swigregister(SpherePatch3D)
9452 get_area(Plane3D g) -> double
9453 get_area(SpherePatch3D g) -> double
9455 return _IMP_algebra.get_area(*args)
9457 def get_sphere_patch_3d_geometry(g):
9458 r"""get_sphere_patch_3d_geometry(SpherePatch3D g) -> SpherePatch3D"""
9459 return _IMP_algebra.get_sphere_patch_3d_geometry(g)
9460 class Cone3D(IMP._GeometricPrimitive3D):
9461 r"""Proxy of C++ IMP::algebra::Cone3D class."""
9463 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9465 def __init__(self, *args):
9467 __init__(Cone3D self) -> Cone3D
9468 __init__(Cone3D self, Segment3D s, double radius) -> Cone3D
9470 _IMP_algebra.Cone3D_swiginit(self, _IMP_algebra.new_Cone3D(*args))
9473 r"""get_tip(Cone3D self) -> Vector3D"""
9474 return _IMP_algebra.Cone3D_get_tip(self)
9476 def get_direction(self):
9477 r"""get_direction(Cone3D self) -> Vector3D"""
9478 return _IMP_algebra.Cone3D_get_direction(self)
9481 r"""get_height(Cone3D self) -> double"""
9482 return _IMP_algebra.Cone3D_get_height(self)
9485 r"""get_angle(Cone3D self) -> double"""
9486 return _IMP_algebra.Cone3D_get_angle(self)
9488 def get_radius(self):
9489 r"""get_radius(Cone3D self) -> double"""
9490 return _IMP_algebra.Cone3D_get_radius(self)
9492 def get_contains(self, v):
9493 r"""get_contains(Cone3D self, Vector3D v) -> bool"""
9494 return _IMP_algebra.Cone3D_get_contains(self, v)
9496 def get_base_plane(self):
9497 r"""get_base_plane(Cone3D self) -> Plane3D"""
9498 return _IMP_algebra.Cone3D_get_base_plane(self)
9500 def show(self, *args):
9501 r"""show(Cone3D self, _ostream out=std::cout)"""
9502 return _IMP_algebra.Cone3D_show(self, *args)
9505 r"""__str__(Cone3D self) -> std::string"""
9506 return _IMP_algebra.Cone3D___str__(self)
9509 r"""__repr__(Cone3D self) -> std::string"""
9510 return _IMP_algebra.Cone3D___repr__(self)
9512 def _get_as_binary(self):
9513 r"""_get_as_binary(Cone3D self) -> PyObject *"""
9514 return _IMP_algebra.Cone3D__get_as_binary(self)
9516 def _set_from_binary(self, p):
9517 r"""_set_from_binary(Cone3D self, PyObject * p)"""
9518 return _IMP_algebra.Cone3D__set_from_binary(self, p)
9520 def __getstate__(self):
9521 p = self._get_as_binary()
9522 if len(self.__dict__) > 1:
9523 d = self.__dict__.copy()
9528 def __setstate__(self, p):
9529 if not hasattr(self,
'this'):
9531 if isinstance(p, tuple):
9533 self.__dict__.update(d)
9534 return self._set_from_binary(p)
9536 __swig_destroy__ = _IMP_algebra.delete_Cone3D
9539 _IMP_algebra.Cone3D_swigregister(Cone3D)
9543 get_surface_area(BoundingBox3D g) -> double
9544 get_surface_area(Sphere3D g) -> double
9545 get_surface_area(Cylinder3D g) -> double
9546 get_surface_area(Ellipsoid3D g) -> double
9547 get_surface_area(Cone3D g) -> double
9549 return _IMP_algebra.get_surface_area(*args)
9553 get_volume(BoundingBox3D g) -> double
9554 get_volume(Sphere3D g) -> double
9555 get_volume(Cylinder3D g) -> double
9556 get_volume(Ellipsoid3D g) -> double
9557 get_volume(Cone3D g) -> double
9559 return _IMP_algebra.get_volume(*args)
9561 def get_cone_3d_geometry(g):
9562 r"""get_cone_3d_geometry(Cone3D g) -> Cone3D"""
9563 return _IMP_algebra.get_cone_3d_geometry(g)
9566 r"""write_pts(IMP::algebra::Vector3Ds const & vs, TextOutput out)"""
9567 return _IMP_algebra.write_pts(vs, out)
9570 r"""read_pts(TextInput input) -> IMP::algebra::Vector3Ds"""
9571 return _IMP_algebra.read_pts(input)
9574 r"""write_spheres(IMP::algebra::Sphere3Ds const & vs, TextOutput out)"""
9575 return _IMP_algebra.write_spheres(vs, out)
9578 r"""read_spheres(TextInput input) -> IMP::algebra::Sphere3Ds"""
9579 return _IMP_algebra.read_spheres(input)
9582 r"""get_random_vector_on_unit_sphere() -> Vector3D"""
9583 return _IMP_algebra.get_random_vector_on_unit_sphere()
9586 r"""get_grid_surface_cover(Cylinder3D cyl, int number_of_cycles, int number_of_points_on_cycle) -> IMP::algebra::Vector3Ds"""
9587 return _IMP_algebra.get_grid_surface_cover(cyl, number_of_cycles, number_of_points_on_cycle)
9590 r"""get_random_chain(unsigned int n, double r, Vector3D start=IMP::Vector3D(0, 0, 0), IMP::algebra::Sphere3Ds const & obstacles=IMP::algebra::Sphere3Ds()) -> IMP::algebra::Vector3Ds"""
9591 return _IMP_algebra.get_random_chain(*args)
9594 r"""reversed_read(void * dest, size_t size, size_t nitems, std::ifstream & f, bool reverse)"""
9595 return _IMP_algebra.reversed_read(dest, size, nitems, f, reverse)
9598 r"""reversed_write(void const * src, size_t size, size_t nitems, std::ofstream & f, bool reverse=False)"""
9599 return _IMP_algebra.reversed_write(src, size, nitems, f, reverse)
9602 r"""get_is_big_endian() -> bool"""
9603 return _IMP_algebra.get_is_big_endian()
9606 r"""get_is_little_endian() -> bool"""
9607 return _IMP_algebra.get_is_little_endian()
9611 get_shortest_segment(Segment3D s, Vector3D p) -> Segment3D
9612 get_shortest_segment(Segment3D sa, Segment3D sb) -> Segment3D
9614 return _IMP_algebra.get_shortest_segment(*args)
9616 r"""Proxy of C++ IMP::algebra::DynamicNearestNeighbor3D class."""
9618 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9620 def __init__(self, vs, query_estimate=1):
9621 r"""__init__(DynamicNearestNeighbor3D self, IMP::algebra::Vector3Ds const & vs, double query_estimate=1) -> DynamicNearestNeighbor3D"""
9622 _IMP_algebra.DynamicNearestNeighbor3D_swiginit(self, _IMP_algebra.new_DynamicNearestNeighbor3D(vs, query_estimate))
9624 def get_in_ball(self, id, distance):
9625 r"""get_in_ball(DynamicNearestNeighbor3D self, int id, double distance) -> IMP::Ints"""
9626 return _IMP_algebra.DynamicNearestNeighbor3D_get_in_ball(self, id, distance)
9628 def set_coordinates(self, id, nc):
9629 r"""set_coordinates(DynamicNearestNeighbor3D self, int id, Vector3D nc)"""
9630 return _IMP_algebra.DynamicNearestNeighbor3D_set_coordinates(self, id, nc)
9632 def get_version_info(self):
9633 r"""get_version_info(DynamicNearestNeighbor3D self) -> VersionInfo"""
9634 return _IMP_algebra.DynamicNearestNeighbor3D_get_version_info(self)
9635 __swig_destroy__ = _IMP_algebra.delete_DynamicNearestNeighbor3D
9638 r"""__str__(DynamicNearestNeighbor3D self) -> std::string"""
9639 return _IMP_algebra.DynamicNearestNeighbor3D___str__(self)
9642 r"""__repr__(DynamicNearestNeighbor3D self) -> std::string"""
9643 return _IMP_algebra.DynamicNearestNeighbor3D___repr__(self)
9647 return _object_cast_to_DynamicNearestNeighbor3D(o)
9651 _IMP_algebra.DynamicNearestNeighbor3D_swigregister(DynamicNearestNeighbor3D)
9653 r"""Proxy of C++ IMP::algebra::VectorKDMetric class."""
9655 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9657 def __init__(self, name):
9658 r"""__init__(VectorKDMetric self, std::string name) -> VectorKDMetric"""
9659 if self.__class__ == VectorKDMetric:
9663 _IMP_algebra.VectorKDMetric_swiginit(self, _IMP_algebra.new_VectorKDMetric(_self, name))
9665 if self.__class__ != VectorKDMetric:
9666 _director_objects.register(self)
9672 r"""get_distance(VectorKDMetric self, VectorKD a, VectorKD b) -> double"""
9673 return _IMP_algebra.VectorKDMetric_get_distance(self, a, b)
9676 r"""get_centroid(VectorKDMetric self, IMP::algebra::VectorKDs const & vs) -> VectorKD"""
9677 return _IMP_algebra.VectorKDMetric_get_centroid(self, vs)
9680 r"""__str__(VectorKDMetric self) -> std::string"""
9681 return _IMP_algebra.VectorKDMetric___str__(self)
9684 r"""__repr__(VectorKDMetric self) -> std::string"""
9685 return _IMP_algebra.VectorKDMetric___repr__(self)
9689 return _object_cast_to_VectorKDMetric(o)
9692 def do_show(self, out):
9697 return _object_cast_to_VectorKDMetric(o)
9699 __swig_destroy__ = _IMP_algebra.delete_VectorKDMetric
9700 def __disown__(self):
9702 _IMP_algebra.disown_VectorKDMetric(self)
9703 return weakref.proxy(self)
9705 def do_destroy(self):
9706 r"""do_destroy(VectorKDMetric self)"""
9707 return _IMP_algebra.VectorKDMetric_do_destroy(self)
9710 _IMP_algebra.VectorKDMetric_swigregister(VectorKDMetric)
9711 class EuclideanVectorKDMetric(VectorKDMetric):
9712 r"""Proxy of C++ IMP::algebra::EuclideanVectorKDMetric class."""
9714 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9716 def __init__(self, *args):
9717 r"""__init__(EuclideanVectorKDMetric self, std::string name="EuclideanVectorKDMetric%1%") -> EuclideanVectorKDMetric"""
9718 _IMP_algebra.EuclideanVectorKDMetric_swiginit(self, _IMP_algebra.new_EuclideanVectorKDMetric(*args))
9720 def get_version_info(self):
9721 r"""get_version_info(EuclideanVectorKDMetric self) -> VersionInfo"""
9722 return _IMP_algebra.EuclideanVectorKDMetric_get_version_info(self)
9723 __swig_destroy__ = _IMP_algebra.delete_EuclideanVectorKDMetric
9726 r"""__str__(EuclideanVectorKDMetric self) -> std::string"""
9727 return _IMP_algebra.EuclideanVectorKDMetric___str__(self)
9730 r"""__repr__(EuclideanVectorKDMetric self) -> std::string"""
9731 return _IMP_algebra.EuclideanVectorKDMetric___repr__(self)
9735 return _object_cast_to_EuclideanVectorKDMetric(o)
9738 def _get_as_binary(self):
9739 r"""_get_as_binary(EuclideanVectorKDMetric self) -> PyObject *"""
9740 return _IMP_algebra.EuclideanVectorKDMetric__get_as_binary(self)
9742 def _set_from_binary(self, p):
9743 r"""_set_from_binary(EuclideanVectorKDMetric self, PyObject * p)"""
9744 return _IMP_algebra.EuclideanVectorKDMetric__set_from_binary(self, p)
9746 def __getstate__(self):
9747 p = self._get_as_binary()
9748 if len(self.__dict__) > 1:
9749 d = self.__dict__.copy()
9754 def __setstate__(self, p):
9755 if not hasattr(self,
'this'):
9757 if isinstance(p, tuple):
9759 self.__dict__.update(d)
9760 return self._set_from_binary(p)
9764 _IMP_algebra.EuclideanVectorKDMetric_swigregister(EuclideanVectorKDMetric)
9765 class MaxVectorKDMetric(VectorKDMetric):
9766 r"""Proxy of C++ IMP::algebra::MaxVectorKDMetric class."""
9768 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9770 def __init__(self, *args):
9771 r"""__init__(MaxVectorKDMetric self, std::string name="MaxVectorKDMetric%1%") -> MaxVectorKDMetric"""
9772 _IMP_algebra.MaxVectorKDMetric_swiginit(self, _IMP_algebra.new_MaxVectorKDMetric(*args))
9774 def get_version_info(self):
9775 r"""get_version_info(MaxVectorKDMetric self) -> VersionInfo"""
9776 return _IMP_algebra.MaxVectorKDMetric_get_version_info(self)
9777 __swig_destroy__ = _IMP_algebra.delete_MaxVectorKDMetric
9780 r"""__str__(MaxVectorKDMetric self) -> std::string"""
9781 return _IMP_algebra.MaxVectorKDMetric___str__(self)
9784 r"""__repr__(MaxVectorKDMetric self) -> std::string"""
9785 return _IMP_algebra.MaxVectorKDMetric___repr__(self)
9789 return _object_cast_to_MaxVectorKDMetric(o)
9792 def _get_as_binary(self):
9793 r"""_get_as_binary(MaxVectorKDMetric self) -> PyObject *"""
9794 return _IMP_algebra.MaxVectorKDMetric__get_as_binary(self)
9796 def _set_from_binary(self, p):
9797 r"""_set_from_binary(MaxVectorKDMetric self, PyObject * p)"""
9798 return _IMP_algebra.MaxVectorKDMetric__set_from_binary(self, p)
9800 def __getstate__(self):
9801 p = self._get_as_binary()
9802 if len(self.__dict__) > 1:
9803 d = self.__dict__.copy()
9808 def __setstate__(self, p):
9809 if not hasattr(self,
'this'):
9811 if isinstance(p, tuple):
9813 self.__dict__.update(d)
9814 return self._set_from_binary(p)
9818 _IMP_algebra.MaxVectorKDMetric_swigregister(MaxVectorKDMetric)
9819 class Gaussian3D(IMP._GeometricPrimitive3D):
9820 r"""Proxy of C++ IMP::algebra::Gaussian3D class."""
9822 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9824 def __init__(self, *args):
9826 __init__(Gaussian3D self) -> Gaussian3D
9827 __init__(Gaussian3D self, ReferenceFrame3D tr, Vector3D variances) -> Gaussian3D
9829 _IMP_algebra.Gaussian3D_swiginit(self, _IMP_algebra.new_Gaussian3D(*args))
9831 def get_reference_frame(self):
9832 r"""get_reference_frame(Gaussian3D self) -> ReferenceFrame3D"""
9833 return _IMP_algebra.Gaussian3D_get_reference_frame(self)
9835 def get_variances(self):
9836 r"""get_variances(Gaussian3D self) -> Vector3D"""
9837 return _IMP_algebra.Gaussian3D_get_variances(self)
9839 def get_center(self):
9840 r"""get_center(Gaussian3D self) -> Vector3D"""
9841 return _IMP_algebra.Gaussian3D_get_center(self)
9843 def show(self, *args):
9844 r"""show(Gaussian3D self, _ostream out=std::cout)"""
9845 return _IMP_algebra.Gaussian3D_show(self, *args)
9848 r"""__str__(Gaussian3D self) -> std::string"""
9849 return _IMP_algebra.Gaussian3D___str__(self)
9852 r"""__repr__(Gaussian3D self) -> std::string"""
9853 return _IMP_algebra.Gaussian3D___repr__(self)
9855 def _get_as_binary(self):
9856 r"""_get_as_binary(Gaussian3D self) -> PyObject *"""
9857 return _IMP_algebra.Gaussian3D__get_as_binary(self)
9859 def _set_from_binary(self, p):
9860 r"""_set_from_binary(Gaussian3D self, PyObject * p)"""
9861 return _IMP_algebra.Gaussian3D__set_from_binary(self, p)
9863 def __getstate__(self):
9864 p = self._get_as_binary()
9865 if len(self.__dict__) > 1:
9866 d = self.__dict__.copy()
9871 def __setstate__(self, p):
9872 if not hasattr(self,
'this'):
9874 if isinstance(p, tuple):
9876 self.__dict__.update(d)
9877 return self._set_from_binary(p)
9879 __swig_destroy__ = _IMP_algebra.delete_Gaussian3D
9882 _IMP_algebra.Gaussian3D_swigregister(Gaussian3D)
9885 r"""get_covariance(Gaussian3D g) -> Eigen::Matrix3d"""
9886 return _IMP_algebra.get_covariance(g)
9889 r"""get_gaussian_from_covariance(Eigen::Matrix3d const & covariance, Vector3D center) -> Gaussian3D"""
9890 return _IMP_algebra.get_gaussian_from_covariance(covariance, center)
9893 r"""get_rasterized(IMP::algebra::Gaussian3Ds const & gmm, IMP::Floats const & weights, double cell_width, BoundingBox3D bb) -> DenseDoubleGrid3D"""
9894 return _IMP_algebra.get_rasterized(gmm, weights, cell_width, bb)
9897 r"""get_rasterized_fast(IMP::algebra::Gaussian3Ds const & gmm, IMP::Floats const & weights, double cell_width, BoundingBox3D bb, double factor=2.5) -> DenseDoubleGrid3D"""
9898 return _IMP_algebra.get_rasterized_fast(gmm, weights, cell_width, bb, factor)
9900 def _pass_matrix_xf(m):
9901 r"""_pass_matrix_xf(Eigen::MatrixXf const & m) -> Eigen::MatrixXf"""
9902 return _IMP_algebra._pass_matrix_xf(m)
9904 def _pass_matrix_xd(m):
9905 r"""_pass_matrix_xd(Eigen::MatrixXd const & m) -> Eigen::MatrixXd"""
9906 return _IMP_algebra._pass_matrix_xd(m)
9908 def _pass_matrix_3d(m):
9909 r"""_pass_matrix_3d(Eigen::Matrix3d const & m) -> Eigen::Matrix3d"""
9910 return _IMP_algebra._pass_matrix_3d(m)
9912 def _pass_array_xd(m):
9913 r"""_pass_array_xd(Eigen::ArrayXXd const & m) -> Eigen::ArrayXXd"""
9914 return _IMP_algebra._pass_array_xd(m)
9916 def _pass_vector_xd(m):
9917 r"""_pass_vector_xd(Eigen::VectorXd const & m) -> Eigen::VectorXd"""
9918 return _IMP_algebra._pass_vector_xd(m)
9920 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 1 > class."""
9922 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9924 def __init__(self, vs, epsilon=0):
9925 r"""__init__(NearestNeighbor1D self, IMP::Vector< IMP::algebra::VectorD< 1 > > const & vs, double epsilon=0) -> NearestNeighbor1D"""
9926 _IMP_algebra.NearestNeighbor1D_swiginit(self, _IMP_algebra.new_NearestNeighbor1D(vs, epsilon))
9928 def set_query_log(self, fname):
9929 r"""set_query_log(NearestNeighbor1D self, std::string fname)"""
9930 return _IMP_algebra.NearestNeighbor1D_set_query_log(self, fname)
9932 def get_nearest_neighbor(self, *args):
9934 get_nearest_neighbor(NearestNeighbor1D self, Vector1D q) -> unsigned int
9935 get_nearest_neighbor(NearestNeighbor1D self, unsigned int i) -> unsigned int
9937 return _IMP_algebra.NearestNeighbor1D_get_nearest_neighbor(self, *args)
9939 def get_nearest_neighbors(self, *args):
9941 get_nearest_neighbors(NearestNeighbor1D self, unsigned int i, unsigned int k) -> IMP::Ints
9942 get_nearest_neighbors(NearestNeighbor1D self, Vector1D v, unsigned int k) -> IMP::Ints
9944 return _IMP_algebra.NearestNeighbor1D_get_nearest_neighbors(self, *args)
9946 def get_in_ball(self, *args):
9948 get_in_ball(NearestNeighbor1D self, unsigned int i, double distance) -> IMP::Ints
9949 get_in_ball(NearestNeighbor1D self, Vector1D pt, double distance) -> IMP::Ints
9951 return _IMP_algebra.NearestNeighbor1D_get_in_ball(self, *args)
9953 def get_version_info(self):
9954 r"""get_version_info(NearestNeighbor1D self) -> VersionInfo"""
9955 return _IMP_algebra.NearestNeighbor1D_get_version_info(self)
9956 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor1D
9959 r"""__str__(NearestNeighbor1D self) -> std::string"""
9960 return _IMP_algebra.NearestNeighbor1D___str__(self)
9963 r"""__repr__(NearestNeighbor1D self) -> std::string"""
9964 return _IMP_algebra.NearestNeighbor1D___repr__(self)
9968 return _object_cast_to_NearestNeighborD(o)
9972 _IMP_algebra.NearestNeighbor1D_swigregister(NearestNeighbor1D)
9974 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 2 > class."""
9976 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
9978 def __init__(self, vs, epsilon=0):
9979 r"""__init__(NearestNeighbor2D self, IMP::Vector< IMP::algebra::VectorD< 2 > > const & vs, double epsilon=0) -> NearestNeighbor2D"""
9980 _IMP_algebra.NearestNeighbor2D_swiginit(self, _IMP_algebra.new_NearestNeighbor2D(vs, epsilon))
9982 def set_query_log(self, fname):
9983 r"""set_query_log(NearestNeighbor2D self, std::string fname)"""
9984 return _IMP_algebra.NearestNeighbor2D_set_query_log(self, fname)
9986 def get_nearest_neighbor(self, *args):
9988 get_nearest_neighbor(NearestNeighbor2D self, Vector2D q) -> unsigned int
9989 get_nearest_neighbor(NearestNeighbor2D self, unsigned int i) -> unsigned int
9991 return _IMP_algebra.NearestNeighbor2D_get_nearest_neighbor(self, *args)
9993 def get_nearest_neighbors(self, *args):
9995 get_nearest_neighbors(NearestNeighbor2D self, unsigned int i, unsigned int k) -> IMP::Ints
9996 get_nearest_neighbors(NearestNeighbor2D self, Vector2D v, unsigned int k) -> IMP::Ints
9998 return _IMP_algebra.NearestNeighbor2D_get_nearest_neighbors(self, *args)
10000 def get_in_ball(self, *args):
10002 get_in_ball(NearestNeighbor2D self, unsigned int i, double distance) -> IMP::Ints
10003 get_in_ball(NearestNeighbor2D self, Vector2D pt, double distance) -> IMP::Ints
10005 return _IMP_algebra.NearestNeighbor2D_get_in_ball(self, *args)
10007 def get_version_info(self):
10008 r"""get_version_info(NearestNeighbor2D self) -> VersionInfo"""
10009 return _IMP_algebra.NearestNeighbor2D_get_version_info(self)
10010 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor2D
10013 r"""__str__(NearestNeighbor2D self) -> std::string"""
10014 return _IMP_algebra.NearestNeighbor2D___str__(self)
10016 def __repr__(self):
10017 r"""__repr__(NearestNeighbor2D self) -> std::string"""
10018 return _IMP_algebra.NearestNeighbor2D___repr__(self)
10022 return _object_cast_to_NearestNeighborD(o)
10026 _IMP_algebra.NearestNeighbor2D_swigregister(NearestNeighbor2D)
10028 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 3 > class."""
10030 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10032 def __init__(self, vs, epsilon=0):
10033 r"""__init__(NearestNeighbor3D self, IMP::Vector< IMP::algebra::VectorD< 3 > > const & vs, double epsilon=0) -> NearestNeighbor3D"""
10034 _IMP_algebra.NearestNeighbor3D_swiginit(self, _IMP_algebra.new_NearestNeighbor3D(vs, epsilon))
10036 def set_query_log(self, fname):
10037 r"""set_query_log(NearestNeighbor3D self, std::string fname)"""
10038 return _IMP_algebra.NearestNeighbor3D_set_query_log(self, fname)
10040 def get_nearest_neighbor(self, *args):
10042 get_nearest_neighbor(NearestNeighbor3D self, Vector3D q) -> unsigned int
10043 get_nearest_neighbor(NearestNeighbor3D self, unsigned int i) -> unsigned int
10045 return _IMP_algebra.NearestNeighbor3D_get_nearest_neighbor(self, *args)
10047 def get_nearest_neighbors(self, *args):
10049 get_nearest_neighbors(NearestNeighbor3D self, unsigned int i, unsigned int k) -> IMP::Ints
10050 get_nearest_neighbors(NearestNeighbor3D self, Vector3D v, unsigned int k) -> IMP::Ints
10052 return _IMP_algebra.NearestNeighbor3D_get_nearest_neighbors(self, *args)
10054 def get_in_ball(self, *args):
10056 get_in_ball(NearestNeighbor3D self, unsigned int i, double distance) -> IMP::Ints
10057 get_in_ball(NearestNeighbor3D self, Vector3D pt, double distance) -> IMP::Ints
10059 return _IMP_algebra.NearestNeighbor3D_get_in_ball(self, *args)
10061 def get_version_info(self):
10062 r"""get_version_info(NearestNeighbor3D self) -> VersionInfo"""
10063 return _IMP_algebra.NearestNeighbor3D_get_version_info(self)
10064 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor3D
10067 r"""__str__(NearestNeighbor3D self) -> std::string"""
10068 return _IMP_algebra.NearestNeighbor3D___str__(self)
10070 def __repr__(self):
10071 r"""__repr__(NearestNeighbor3D self) -> std::string"""
10072 return _IMP_algebra.NearestNeighbor3D___repr__(self)
10076 return _object_cast_to_NearestNeighborD(o)
10080 _IMP_algebra.NearestNeighbor3D_swigregister(NearestNeighbor3D)
10082 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 4 > class."""
10084 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10086 def __init__(self, vs, epsilon=0):
10087 r"""__init__(NearestNeighbor4D self, IMP::Vector< IMP::algebra::VectorD< 4 > > const & vs, double epsilon=0) -> NearestNeighbor4D"""
10088 _IMP_algebra.NearestNeighbor4D_swiginit(self, _IMP_algebra.new_NearestNeighbor4D(vs, epsilon))
10090 def set_query_log(self, fname):
10091 r"""set_query_log(NearestNeighbor4D self, std::string fname)"""
10092 return _IMP_algebra.NearestNeighbor4D_set_query_log(self, fname)
10094 def get_nearest_neighbor(self, *args):
10096 get_nearest_neighbor(NearestNeighbor4D self, Vector4D q) -> unsigned int
10097 get_nearest_neighbor(NearestNeighbor4D self, unsigned int i) -> unsigned int
10099 return _IMP_algebra.NearestNeighbor4D_get_nearest_neighbor(self, *args)
10101 def get_nearest_neighbors(self, *args):
10103 get_nearest_neighbors(NearestNeighbor4D self, unsigned int i, unsigned int k) -> IMP::Ints
10104 get_nearest_neighbors(NearestNeighbor4D self, Vector4D v, unsigned int k) -> IMP::Ints
10106 return _IMP_algebra.NearestNeighbor4D_get_nearest_neighbors(self, *args)
10108 def get_in_ball(self, *args):
10110 get_in_ball(NearestNeighbor4D self, unsigned int i, double distance) -> IMP::Ints
10111 get_in_ball(NearestNeighbor4D self, Vector4D pt, double distance) -> IMP::Ints
10113 return _IMP_algebra.NearestNeighbor4D_get_in_ball(self, *args)
10115 def get_version_info(self):
10116 r"""get_version_info(NearestNeighbor4D self) -> VersionInfo"""
10117 return _IMP_algebra.NearestNeighbor4D_get_version_info(self)
10118 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor4D
10121 r"""__str__(NearestNeighbor4D self) -> std::string"""
10122 return _IMP_algebra.NearestNeighbor4D___str__(self)
10124 def __repr__(self):
10125 r"""__repr__(NearestNeighbor4D self) -> std::string"""
10126 return _IMP_algebra.NearestNeighbor4D___repr__(self)
10130 return _object_cast_to_NearestNeighborD(o)
10134 _IMP_algebra.NearestNeighbor4D_swigregister(NearestNeighbor4D)
10136 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 5 > class."""
10138 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10140 def __init__(self, vs, epsilon=0):
10141 r"""__init__(NearestNeighbor5D self, IMP::Vector< IMP::algebra::VectorD< 5 > > const & vs, double epsilon=0) -> NearestNeighbor5D"""
10142 _IMP_algebra.NearestNeighbor5D_swiginit(self, _IMP_algebra.new_NearestNeighbor5D(vs, epsilon))
10144 def set_query_log(self, fname):
10145 r"""set_query_log(NearestNeighbor5D self, std::string fname)"""
10146 return _IMP_algebra.NearestNeighbor5D_set_query_log(self, fname)
10148 def get_nearest_neighbor(self, *args):
10150 get_nearest_neighbor(NearestNeighbor5D self, Vector5D q) -> unsigned int
10151 get_nearest_neighbor(NearestNeighbor5D self, unsigned int i) -> unsigned int
10153 return _IMP_algebra.NearestNeighbor5D_get_nearest_neighbor(self, *args)
10155 def get_nearest_neighbors(self, *args):
10157 get_nearest_neighbors(NearestNeighbor5D self, unsigned int i, unsigned int k) -> IMP::Ints
10158 get_nearest_neighbors(NearestNeighbor5D self, Vector5D v, unsigned int k) -> IMP::Ints
10160 return _IMP_algebra.NearestNeighbor5D_get_nearest_neighbors(self, *args)
10162 def get_in_ball(self, *args):
10164 get_in_ball(NearestNeighbor5D self, unsigned int i, double distance) -> IMP::Ints
10165 get_in_ball(NearestNeighbor5D self, Vector5D pt, double distance) -> IMP::Ints
10167 return _IMP_algebra.NearestNeighbor5D_get_in_ball(self, *args)
10169 def get_version_info(self):
10170 r"""get_version_info(NearestNeighbor5D self) -> VersionInfo"""
10171 return _IMP_algebra.NearestNeighbor5D_get_version_info(self)
10172 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor5D
10175 r"""__str__(NearestNeighbor5D self) -> std::string"""
10176 return _IMP_algebra.NearestNeighbor5D___str__(self)
10178 def __repr__(self):
10179 r"""__repr__(NearestNeighbor5D self) -> std::string"""
10180 return _IMP_algebra.NearestNeighbor5D___repr__(self)
10184 return _object_cast_to_NearestNeighborD(o)
10188 _IMP_algebra.NearestNeighbor5D_swigregister(NearestNeighbor5D)
10190 r"""Proxy of C++ IMP::algebra::NearestNeighborD< 6 > class."""
10192 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10194 def __init__(self, vs, epsilon=0):
10195 r"""__init__(NearestNeighbor6D self, IMP::Vector< IMP::algebra::VectorD< 6 > > const & vs, double epsilon=0) -> NearestNeighbor6D"""
10196 _IMP_algebra.NearestNeighbor6D_swiginit(self, _IMP_algebra.new_NearestNeighbor6D(vs, epsilon))
10198 def set_query_log(self, fname):
10199 r"""set_query_log(NearestNeighbor6D self, std::string fname)"""
10200 return _IMP_algebra.NearestNeighbor6D_set_query_log(self, fname)
10202 def get_nearest_neighbor(self, *args):
10204 get_nearest_neighbor(NearestNeighbor6D self, Vector6D q) -> unsigned int
10205 get_nearest_neighbor(NearestNeighbor6D self, unsigned int i) -> unsigned int
10207 return _IMP_algebra.NearestNeighbor6D_get_nearest_neighbor(self, *args)
10209 def get_nearest_neighbors(self, *args):
10211 get_nearest_neighbors(NearestNeighbor6D self, unsigned int i, unsigned int k) -> IMP::Ints
10212 get_nearest_neighbors(NearestNeighbor6D self, Vector6D v, unsigned int k) -> IMP::Ints
10214 return _IMP_algebra.NearestNeighbor6D_get_nearest_neighbors(self, *args)
10216 def get_in_ball(self, *args):
10218 get_in_ball(NearestNeighbor6D self, unsigned int i, double distance) -> IMP::Ints
10219 get_in_ball(NearestNeighbor6D self, Vector6D pt, double distance) -> IMP::Ints
10221 return _IMP_algebra.NearestNeighbor6D_get_in_ball(self, *args)
10223 def get_version_info(self):
10224 r"""get_version_info(NearestNeighbor6D self) -> VersionInfo"""
10225 return _IMP_algebra.NearestNeighbor6D_get_version_info(self)
10226 __swig_destroy__ = _IMP_algebra.delete_NearestNeighbor6D
10229 r"""__str__(NearestNeighbor6D self) -> std::string"""
10230 return _IMP_algebra.NearestNeighbor6D___str__(self)
10232 def __repr__(self):
10233 r"""__repr__(NearestNeighbor6D self) -> std::string"""
10234 return _IMP_algebra.NearestNeighbor6D___repr__(self)
10238 return _object_cast_to_NearestNeighborD(o)
10242 _IMP_algebra.NearestNeighbor6D_swigregister(NearestNeighbor6D)
10244 r"""Proxy of C++ IMP::algebra::NearestNeighborD< -1 > class."""
10246 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10248 def __init__(self, vs, epsilon=0):
10249 r"""__init__(NearestNeighborKD self, IMP::Vector< IMP::algebra::VectorD< -1 > > const & vs, double epsilon=0) -> NearestNeighborKD"""
10250 _IMP_algebra.NearestNeighborKD_swiginit(self, _IMP_algebra.new_NearestNeighborKD(vs, epsilon))
10252 def set_query_log(self, fname):
10253 r"""set_query_log(NearestNeighborKD self, std::string fname)"""
10254 return _IMP_algebra.NearestNeighborKD_set_query_log(self, fname)
10256 def get_nearest_neighbor(self, *args):
10258 get_nearest_neighbor(NearestNeighborKD self, VectorKD q) -> unsigned int
10259 get_nearest_neighbor(NearestNeighborKD self, unsigned int i) -> unsigned int
10261 return _IMP_algebra.NearestNeighborKD_get_nearest_neighbor(self, *args)
10263 def get_nearest_neighbors(self, *args):
10265 get_nearest_neighbors(NearestNeighborKD self, unsigned int i, unsigned int k) -> IMP::Ints
10266 get_nearest_neighbors(NearestNeighborKD self, VectorKD v, unsigned int k) -> IMP::Ints
10268 return _IMP_algebra.NearestNeighborKD_get_nearest_neighbors(self, *args)
10270 def get_in_ball(self, *args):
10272 get_in_ball(NearestNeighborKD self, unsigned int i, double distance) -> IMP::Ints
10273 get_in_ball(NearestNeighborKD self, VectorKD pt, double distance) -> IMP::Ints
10275 return _IMP_algebra.NearestNeighborKD_get_in_ball(self, *args)
10277 def get_version_info(self):
10278 r"""get_version_info(NearestNeighborKD self) -> VersionInfo"""
10279 return _IMP_algebra.NearestNeighborKD_get_version_info(self)
10280 __swig_destroy__ = _IMP_algebra.delete_NearestNeighborKD
10283 r"""__str__(NearestNeighborKD self) -> std::string"""
10284 return _IMP_algebra.NearestNeighborKD___str__(self)
10286 def __repr__(self):
10287 r"""__repr__(NearestNeighborKD self) -> std::string"""
10288 return _IMP_algebra.NearestNeighborKD___repr__(self)
10292 return _object_cast_to_NearestNeighborD(o)
10296 _IMP_algebra.NearestNeighborKD_swigregister(NearestNeighborKD)
10299 r"""get_transformation_aligning_pair(IMP::algebra::Vector2Ds const & set_from, IMP::algebra::Vector2Ds const & set_to) -> Transformation2D"""
10300 return _IMP_algebra.get_transformation_aligning_pair(set_from, set_to)
10301 class PrincipalComponentAnalysis1D(IMP._GeometricPrimitive1D):
10302 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 1 > class."""
10304 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10306 def __init__(self, *args):
10308 __init__(PrincipalComponentAnalysis1D self) -> PrincipalComponentAnalysis1D
10309 __init__(PrincipalComponentAnalysis1D self, IMP::Vector< IMP::algebra::VectorD< 1 > > const & pcs, Vector1D values, Vector1D centroid) -> PrincipalComponentAnalysis1D
10311 _IMP_algebra.PrincipalComponentAnalysis1D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis1D(*args))
10314 r"""get_principal_components(PrincipalComponentAnalysis1D self) -> IMP::Vector< IMP::algebra::VectorD< 1 > >"""
10315 return _IMP_algebra.PrincipalComponentAnalysis1D_get_principal_components(self)
10317 def get_principal_component(self, i):
10318 r"""get_principal_component(PrincipalComponentAnalysis1D self, unsigned int i) -> Vector1D"""
10319 return _IMP_algebra.PrincipalComponentAnalysis1D_get_principal_component(self, i)
10321 def get_principal_values(self):
10322 r"""get_principal_values(PrincipalComponentAnalysis1D self) -> Vector1D"""
10323 return _IMP_algebra.PrincipalComponentAnalysis1D_get_principal_values(self)
10325 def get_principal_value(self, i):
10326 r"""get_principal_value(PrincipalComponentAnalysis1D self, unsigned int i) -> double"""
10327 return _IMP_algebra.PrincipalComponentAnalysis1D_get_principal_value(self, i)
10330 r"""get_centroid(PrincipalComponentAnalysis1D self) -> Vector1D"""
10331 return _IMP_algebra.PrincipalComponentAnalysis1D_get_centroid(self)
10333 def set_centroid(self, cntr):
10334 r"""set_centroid(PrincipalComponentAnalysis1D self, Vector1D cntr)"""
10335 return _IMP_algebra.PrincipalComponentAnalysis1D_set_centroid(self, cntr)
10337 def show(self, *args):
10338 r"""show(PrincipalComponentAnalysis1D self, _ostream out=std::cout)"""
10339 return _IMP_algebra.PrincipalComponentAnalysis1D_show(self, *args)
10341 def __cmp__(self, o):
10342 r"""__cmp__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> int"""
10343 return _IMP_algebra.PrincipalComponentAnalysis1D___cmp__(self, o)
10345 def __eq__(self, o):
10346 r"""__eq__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
10347 return _IMP_algebra.PrincipalComponentAnalysis1D___eq__(self, o)
10349 def __ne__(self, o):
10350 r"""__ne__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
10351 return _IMP_algebra.PrincipalComponentAnalysis1D___ne__(self, o)
10353 def __lt__(self, o):
10354 r"""__lt__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
10355 return _IMP_algebra.PrincipalComponentAnalysis1D___lt__(self, o)
10357 def __gt__(self, o):
10358 r"""__gt__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
10359 return _IMP_algebra.PrincipalComponentAnalysis1D___gt__(self, o)
10361 def __ge__(self, o):
10362 r"""__ge__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
10363 return _IMP_algebra.PrincipalComponentAnalysis1D___ge__(self, o)
10365 def __le__(self, o):
10366 r"""__le__(PrincipalComponentAnalysis1D self, PrincipalComponentAnalysis1D o) -> bool"""
10367 return _IMP_algebra.PrincipalComponentAnalysis1D___le__(self, o)
10370 r"""__str__(PrincipalComponentAnalysis1D self) -> std::string"""
10371 return _IMP_algebra.PrincipalComponentAnalysis1D___str__(self)
10373 def __repr__(self):
10374 r"""__repr__(PrincipalComponentAnalysis1D self) -> std::string"""
10375 return _IMP_algebra.PrincipalComponentAnalysis1D___repr__(self)
10377 def _get_as_binary(self):
10378 r"""_get_as_binary(PrincipalComponentAnalysis1D self) -> PyObject *"""
10379 return _IMP_algebra.PrincipalComponentAnalysis1D__get_as_binary(self)
10381 def _set_from_binary(self, p):
10382 r"""_set_from_binary(PrincipalComponentAnalysis1D self, PyObject * p)"""
10383 return _IMP_algebra.PrincipalComponentAnalysis1D__set_from_binary(self, p)
10385 def __getstate__(self):
10386 p = self._get_as_binary()
10387 if len(self.__dict__) > 1:
10388 d = self.__dict__.copy()
10393 def __setstate__(self, p):
10394 if not hasattr(self,
'this'):
10396 if isinstance(p, tuple):
10398 self.__dict__.update(d)
10399 return self._set_from_binary(p)
10401 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis1D
10404 _IMP_algebra.PrincipalComponentAnalysis1D_swigregister(PrincipalComponentAnalysis1D)
10405 class PrincipalComponentAnalysis2D(IMP._GeometricPrimitive2D):
10406 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 2 > class."""
10408 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10410 def __init__(self, *args):
10412 __init__(PrincipalComponentAnalysis2D self) -> PrincipalComponentAnalysis2D
10413 __init__(PrincipalComponentAnalysis2D self, IMP::Vector< IMP::algebra::VectorD< 2 > > const & pcs, Vector2D values, Vector2D centroid) -> PrincipalComponentAnalysis2D
10415 _IMP_algebra.PrincipalComponentAnalysis2D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis2D(*args))
10418 r"""get_principal_components(PrincipalComponentAnalysis2D self) -> IMP::Vector< IMP::algebra::VectorD< 2 > >"""
10419 return _IMP_algebra.PrincipalComponentAnalysis2D_get_principal_components(self)
10421 def get_principal_component(self, i):
10422 r"""get_principal_component(PrincipalComponentAnalysis2D self, unsigned int i) -> Vector2D"""
10423 return _IMP_algebra.PrincipalComponentAnalysis2D_get_principal_component(self, i)
10425 def get_principal_values(self):
10426 r"""get_principal_values(PrincipalComponentAnalysis2D self) -> Vector2D"""
10427 return _IMP_algebra.PrincipalComponentAnalysis2D_get_principal_values(self)
10429 def get_principal_value(self, i):
10430 r"""get_principal_value(PrincipalComponentAnalysis2D self, unsigned int i) -> double"""
10431 return _IMP_algebra.PrincipalComponentAnalysis2D_get_principal_value(self, i)
10434 r"""get_centroid(PrincipalComponentAnalysis2D self) -> Vector2D"""
10435 return _IMP_algebra.PrincipalComponentAnalysis2D_get_centroid(self)
10437 def set_centroid(self, cntr):
10438 r"""set_centroid(PrincipalComponentAnalysis2D self, Vector2D cntr)"""
10439 return _IMP_algebra.PrincipalComponentAnalysis2D_set_centroid(self, cntr)
10441 def show(self, *args):
10442 r"""show(PrincipalComponentAnalysis2D self, _ostream out=std::cout)"""
10443 return _IMP_algebra.PrincipalComponentAnalysis2D_show(self, *args)
10445 def __cmp__(self, o):
10446 r"""__cmp__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> int"""
10447 return _IMP_algebra.PrincipalComponentAnalysis2D___cmp__(self, o)
10449 def __eq__(self, o):
10450 r"""__eq__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
10451 return _IMP_algebra.PrincipalComponentAnalysis2D___eq__(self, o)
10453 def __ne__(self, o):
10454 r"""__ne__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
10455 return _IMP_algebra.PrincipalComponentAnalysis2D___ne__(self, o)
10457 def __lt__(self, o):
10458 r"""__lt__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
10459 return _IMP_algebra.PrincipalComponentAnalysis2D___lt__(self, o)
10461 def __gt__(self, o):
10462 r"""__gt__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
10463 return _IMP_algebra.PrincipalComponentAnalysis2D___gt__(self, o)
10465 def __ge__(self, o):
10466 r"""__ge__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
10467 return _IMP_algebra.PrincipalComponentAnalysis2D___ge__(self, o)
10469 def __le__(self, o):
10470 r"""__le__(PrincipalComponentAnalysis2D self, PrincipalComponentAnalysis2D o) -> bool"""
10471 return _IMP_algebra.PrincipalComponentAnalysis2D___le__(self, o)
10474 r"""__str__(PrincipalComponentAnalysis2D self) -> std::string"""
10475 return _IMP_algebra.PrincipalComponentAnalysis2D___str__(self)
10477 def __repr__(self):
10478 r"""__repr__(PrincipalComponentAnalysis2D self) -> std::string"""
10479 return _IMP_algebra.PrincipalComponentAnalysis2D___repr__(self)
10481 def _get_as_binary(self):
10482 r"""_get_as_binary(PrincipalComponentAnalysis2D self) -> PyObject *"""
10483 return _IMP_algebra.PrincipalComponentAnalysis2D__get_as_binary(self)
10485 def _set_from_binary(self, p):
10486 r"""_set_from_binary(PrincipalComponentAnalysis2D self, PyObject * p)"""
10487 return _IMP_algebra.PrincipalComponentAnalysis2D__set_from_binary(self, p)
10489 def __getstate__(self):
10490 p = self._get_as_binary()
10491 if len(self.__dict__) > 1:
10492 d = self.__dict__.copy()
10497 def __setstate__(self, p):
10498 if not hasattr(self,
'this'):
10500 if isinstance(p, tuple):
10502 self.__dict__.update(d)
10503 return self._set_from_binary(p)
10505 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis2D
10508 _IMP_algebra.PrincipalComponentAnalysis2D_swigregister(PrincipalComponentAnalysis2D)
10509 class PrincipalComponentAnalysis3D(IMP._GeometricPrimitive3D):
10510 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 3 > class."""
10512 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10514 def __init__(self, *args):
10516 __init__(PrincipalComponentAnalysis3D self) -> PrincipalComponentAnalysis3D
10517 __init__(PrincipalComponentAnalysis3D self, IMP::Vector< IMP::algebra::VectorD< 3 > > const & pcs, Vector3D values, Vector3D centroid) -> PrincipalComponentAnalysis3D
10519 _IMP_algebra.PrincipalComponentAnalysis3D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis3D(*args))
10522 r"""get_principal_components(PrincipalComponentAnalysis3D self) -> IMP::Vector< IMP::algebra::VectorD< 3 > >"""
10523 return _IMP_algebra.PrincipalComponentAnalysis3D_get_principal_components(self)
10525 def get_principal_component(self, i):
10526 r"""get_principal_component(PrincipalComponentAnalysis3D self, unsigned int i) -> Vector3D"""
10527 return _IMP_algebra.PrincipalComponentAnalysis3D_get_principal_component(self, i)
10529 def get_principal_values(self):
10530 r"""get_principal_values(PrincipalComponentAnalysis3D self) -> Vector3D"""
10531 return _IMP_algebra.PrincipalComponentAnalysis3D_get_principal_values(self)
10533 def get_principal_value(self, i):
10534 r"""get_principal_value(PrincipalComponentAnalysis3D self, unsigned int i) -> double"""
10535 return _IMP_algebra.PrincipalComponentAnalysis3D_get_principal_value(self, i)
10538 r"""get_centroid(PrincipalComponentAnalysis3D self) -> Vector3D"""
10539 return _IMP_algebra.PrincipalComponentAnalysis3D_get_centroid(self)
10541 def set_centroid(self, cntr):
10542 r"""set_centroid(PrincipalComponentAnalysis3D self, Vector3D cntr)"""
10543 return _IMP_algebra.PrincipalComponentAnalysis3D_set_centroid(self, cntr)
10545 def show(self, *args):
10546 r"""show(PrincipalComponentAnalysis3D self, _ostream out=std::cout)"""
10547 return _IMP_algebra.PrincipalComponentAnalysis3D_show(self, *args)
10549 def __cmp__(self, o):
10550 r"""__cmp__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> int"""
10551 return _IMP_algebra.PrincipalComponentAnalysis3D___cmp__(self, o)
10553 def __eq__(self, o):
10554 r"""__eq__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
10555 return _IMP_algebra.PrincipalComponentAnalysis3D___eq__(self, o)
10557 def __ne__(self, o):
10558 r"""__ne__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
10559 return _IMP_algebra.PrincipalComponentAnalysis3D___ne__(self, o)
10561 def __lt__(self, o):
10562 r"""__lt__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
10563 return _IMP_algebra.PrincipalComponentAnalysis3D___lt__(self, o)
10565 def __gt__(self, o):
10566 r"""__gt__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
10567 return _IMP_algebra.PrincipalComponentAnalysis3D___gt__(self, o)
10569 def __ge__(self, o):
10570 r"""__ge__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
10571 return _IMP_algebra.PrincipalComponentAnalysis3D___ge__(self, o)
10573 def __le__(self, o):
10574 r"""__le__(PrincipalComponentAnalysis3D self, PrincipalComponentAnalysis3D o) -> bool"""
10575 return _IMP_algebra.PrincipalComponentAnalysis3D___le__(self, o)
10578 r"""__str__(PrincipalComponentAnalysis3D self) -> std::string"""
10579 return _IMP_algebra.PrincipalComponentAnalysis3D___str__(self)
10581 def __repr__(self):
10582 r"""__repr__(PrincipalComponentAnalysis3D self) -> std::string"""
10583 return _IMP_algebra.PrincipalComponentAnalysis3D___repr__(self)
10585 def _get_as_binary(self):
10586 r"""_get_as_binary(PrincipalComponentAnalysis3D self) -> PyObject *"""
10587 return _IMP_algebra.PrincipalComponentAnalysis3D__get_as_binary(self)
10589 def _set_from_binary(self, p):
10590 r"""_set_from_binary(PrincipalComponentAnalysis3D self, PyObject * p)"""
10591 return _IMP_algebra.PrincipalComponentAnalysis3D__set_from_binary(self, p)
10593 def __getstate__(self):
10594 p = self._get_as_binary()
10595 if len(self.__dict__) > 1:
10596 d = self.__dict__.copy()
10601 def __setstate__(self, p):
10602 if not hasattr(self,
'this'):
10604 if isinstance(p, tuple):
10606 self.__dict__.update(d)
10607 return self._set_from_binary(p)
10609 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis3D
10612 _IMP_algebra.PrincipalComponentAnalysis3D_swigregister(PrincipalComponentAnalysis3D)
10613 class PrincipalComponentAnalysis4D(IMP._GeometricPrimitive4D):
10614 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 4 > class."""
10616 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10618 def __init__(self, *args):
10620 __init__(PrincipalComponentAnalysis4D self) -> PrincipalComponentAnalysis4D
10621 __init__(PrincipalComponentAnalysis4D self, IMP::Vector< IMP::algebra::VectorD< 4 > > const & pcs, Vector4D values, Vector4D centroid) -> PrincipalComponentAnalysis4D
10623 _IMP_algebra.PrincipalComponentAnalysis4D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis4D(*args))
10626 r"""get_principal_components(PrincipalComponentAnalysis4D self) -> IMP::Vector< IMP::algebra::VectorD< 4 > >"""
10627 return _IMP_algebra.PrincipalComponentAnalysis4D_get_principal_components(self)
10629 def get_principal_component(self, i):
10630 r"""get_principal_component(PrincipalComponentAnalysis4D self, unsigned int i) -> Vector4D"""
10631 return _IMP_algebra.PrincipalComponentAnalysis4D_get_principal_component(self, i)
10633 def get_principal_values(self):
10634 r"""get_principal_values(PrincipalComponentAnalysis4D self) -> Vector4D"""
10635 return _IMP_algebra.PrincipalComponentAnalysis4D_get_principal_values(self)
10637 def get_principal_value(self, i):
10638 r"""get_principal_value(PrincipalComponentAnalysis4D self, unsigned int i) -> double"""
10639 return _IMP_algebra.PrincipalComponentAnalysis4D_get_principal_value(self, i)
10642 r"""get_centroid(PrincipalComponentAnalysis4D self) -> Vector4D"""
10643 return _IMP_algebra.PrincipalComponentAnalysis4D_get_centroid(self)
10645 def set_centroid(self, cntr):
10646 r"""set_centroid(PrincipalComponentAnalysis4D self, Vector4D cntr)"""
10647 return _IMP_algebra.PrincipalComponentAnalysis4D_set_centroid(self, cntr)
10649 def show(self, *args):
10650 r"""show(PrincipalComponentAnalysis4D self, _ostream out=std::cout)"""
10651 return _IMP_algebra.PrincipalComponentAnalysis4D_show(self, *args)
10653 def __cmp__(self, o):
10654 r"""__cmp__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> int"""
10655 return _IMP_algebra.PrincipalComponentAnalysis4D___cmp__(self, o)
10657 def __eq__(self, o):
10658 r"""__eq__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
10659 return _IMP_algebra.PrincipalComponentAnalysis4D___eq__(self, o)
10661 def __ne__(self, o):
10662 r"""__ne__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
10663 return _IMP_algebra.PrincipalComponentAnalysis4D___ne__(self, o)
10665 def __lt__(self, o):
10666 r"""__lt__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
10667 return _IMP_algebra.PrincipalComponentAnalysis4D___lt__(self, o)
10669 def __gt__(self, o):
10670 r"""__gt__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
10671 return _IMP_algebra.PrincipalComponentAnalysis4D___gt__(self, o)
10673 def __ge__(self, o):
10674 r"""__ge__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
10675 return _IMP_algebra.PrincipalComponentAnalysis4D___ge__(self, o)
10677 def __le__(self, o):
10678 r"""__le__(PrincipalComponentAnalysis4D self, PrincipalComponentAnalysis4D o) -> bool"""
10679 return _IMP_algebra.PrincipalComponentAnalysis4D___le__(self, o)
10682 r"""__str__(PrincipalComponentAnalysis4D self) -> std::string"""
10683 return _IMP_algebra.PrincipalComponentAnalysis4D___str__(self)
10685 def __repr__(self):
10686 r"""__repr__(PrincipalComponentAnalysis4D self) -> std::string"""
10687 return _IMP_algebra.PrincipalComponentAnalysis4D___repr__(self)
10689 def _get_as_binary(self):
10690 r"""_get_as_binary(PrincipalComponentAnalysis4D self) -> PyObject *"""
10691 return _IMP_algebra.PrincipalComponentAnalysis4D__get_as_binary(self)
10693 def _set_from_binary(self, p):
10694 r"""_set_from_binary(PrincipalComponentAnalysis4D self, PyObject * p)"""
10695 return _IMP_algebra.PrincipalComponentAnalysis4D__set_from_binary(self, p)
10697 def __getstate__(self):
10698 p = self._get_as_binary()
10699 if len(self.__dict__) > 1:
10700 d = self.__dict__.copy()
10705 def __setstate__(self, p):
10706 if not hasattr(self,
'this'):
10708 if isinstance(p, tuple):
10710 self.__dict__.update(d)
10711 return self._set_from_binary(p)
10713 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis4D
10716 _IMP_algebra.PrincipalComponentAnalysis4D_swigregister(PrincipalComponentAnalysis4D)
10717 class PrincipalComponentAnalysis5D(IMP._GeometricPrimitive5D):
10718 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 5 > class."""
10720 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10722 def __init__(self, *args):
10724 __init__(PrincipalComponentAnalysis5D self) -> PrincipalComponentAnalysis5D
10725 __init__(PrincipalComponentAnalysis5D self, IMP::Vector< IMP::algebra::VectorD< 5 > > const & pcs, Vector5D values, Vector5D centroid) -> PrincipalComponentAnalysis5D
10727 _IMP_algebra.PrincipalComponentAnalysis5D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis5D(*args))
10730 r"""get_principal_components(PrincipalComponentAnalysis5D self) -> IMP::Vector< IMP::algebra::VectorD< 5 > >"""
10731 return _IMP_algebra.PrincipalComponentAnalysis5D_get_principal_components(self)
10733 def get_principal_component(self, i):
10734 r"""get_principal_component(PrincipalComponentAnalysis5D self, unsigned int i) -> Vector5D"""
10735 return _IMP_algebra.PrincipalComponentAnalysis5D_get_principal_component(self, i)
10737 def get_principal_values(self):
10738 r"""get_principal_values(PrincipalComponentAnalysis5D self) -> Vector5D"""
10739 return _IMP_algebra.PrincipalComponentAnalysis5D_get_principal_values(self)
10741 def get_principal_value(self, i):
10742 r"""get_principal_value(PrincipalComponentAnalysis5D self, unsigned int i) -> double"""
10743 return _IMP_algebra.PrincipalComponentAnalysis5D_get_principal_value(self, i)
10746 r"""get_centroid(PrincipalComponentAnalysis5D self) -> Vector5D"""
10747 return _IMP_algebra.PrincipalComponentAnalysis5D_get_centroid(self)
10749 def set_centroid(self, cntr):
10750 r"""set_centroid(PrincipalComponentAnalysis5D self, Vector5D cntr)"""
10751 return _IMP_algebra.PrincipalComponentAnalysis5D_set_centroid(self, cntr)
10753 def show(self, *args):
10754 r"""show(PrincipalComponentAnalysis5D self, _ostream out=std::cout)"""
10755 return _IMP_algebra.PrincipalComponentAnalysis5D_show(self, *args)
10757 def __cmp__(self, o):
10758 r"""__cmp__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> int"""
10759 return _IMP_algebra.PrincipalComponentAnalysis5D___cmp__(self, o)
10761 def __eq__(self, o):
10762 r"""__eq__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
10763 return _IMP_algebra.PrincipalComponentAnalysis5D___eq__(self, o)
10765 def __ne__(self, o):
10766 r"""__ne__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
10767 return _IMP_algebra.PrincipalComponentAnalysis5D___ne__(self, o)
10769 def __lt__(self, o):
10770 r"""__lt__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
10771 return _IMP_algebra.PrincipalComponentAnalysis5D___lt__(self, o)
10773 def __gt__(self, o):
10774 r"""__gt__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
10775 return _IMP_algebra.PrincipalComponentAnalysis5D___gt__(self, o)
10777 def __ge__(self, o):
10778 r"""__ge__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
10779 return _IMP_algebra.PrincipalComponentAnalysis5D___ge__(self, o)
10781 def __le__(self, o):
10782 r"""__le__(PrincipalComponentAnalysis5D self, PrincipalComponentAnalysis5D o) -> bool"""
10783 return _IMP_algebra.PrincipalComponentAnalysis5D___le__(self, o)
10786 r"""__str__(PrincipalComponentAnalysis5D self) -> std::string"""
10787 return _IMP_algebra.PrincipalComponentAnalysis5D___str__(self)
10789 def __repr__(self):
10790 r"""__repr__(PrincipalComponentAnalysis5D self) -> std::string"""
10791 return _IMP_algebra.PrincipalComponentAnalysis5D___repr__(self)
10793 def _get_as_binary(self):
10794 r"""_get_as_binary(PrincipalComponentAnalysis5D self) -> PyObject *"""
10795 return _IMP_algebra.PrincipalComponentAnalysis5D__get_as_binary(self)
10797 def _set_from_binary(self, p):
10798 r"""_set_from_binary(PrincipalComponentAnalysis5D self, PyObject * p)"""
10799 return _IMP_algebra.PrincipalComponentAnalysis5D__set_from_binary(self, p)
10801 def __getstate__(self):
10802 p = self._get_as_binary()
10803 if len(self.__dict__) > 1:
10804 d = self.__dict__.copy()
10809 def __setstate__(self, p):
10810 if not hasattr(self,
'this'):
10812 if isinstance(p, tuple):
10814 self.__dict__.update(d)
10815 return self._set_from_binary(p)
10817 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis5D
10820 _IMP_algebra.PrincipalComponentAnalysis5D_swigregister(PrincipalComponentAnalysis5D)
10821 class PrincipalComponentAnalysis6D(IMP._GeometricPrimitive6D):
10822 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< 6 > class."""
10824 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10826 def __init__(self, *args):
10828 __init__(PrincipalComponentAnalysis6D self) -> PrincipalComponentAnalysis6D
10829 __init__(PrincipalComponentAnalysis6D self, IMP::Vector< IMP::algebra::VectorD< 6 > > const & pcs, Vector6D values, Vector6D centroid) -> PrincipalComponentAnalysis6D
10831 _IMP_algebra.PrincipalComponentAnalysis6D_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysis6D(*args))
10834 r"""get_principal_components(PrincipalComponentAnalysis6D self) -> IMP::Vector< IMP::algebra::VectorD< 6 > >"""
10835 return _IMP_algebra.PrincipalComponentAnalysis6D_get_principal_components(self)
10837 def get_principal_component(self, i):
10838 r"""get_principal_component(PrincipalComponentAnalysis6D self, unsigned int i) -> Vector6D"""
10839 return _IMP_algebra.PrincipalComponentAnalysis6D_get_principal_component(self, i)
10841 def get_principal_values(self):
10842 r"""get_principal_values(PrincipalComponentAnalysis6D self) -> Vector6D"""
10843 return _IMP_algebra.PrincipalComponentAnalysis6D_get_principal_values(self)
10845 def get_principal_value(self, i):
10846 r"""get_principal_value(PrincipalComponentAnalysis6D self, unsigned int i) -> double"""
10847 return _IMP_algebra.PrincipalComponentAnalysis6D_get_principal_value(self, i)
10850 r"""get_centroid(PrincipalComponentAnalysis6D self) -> Vector6D"""
10851 return _IMP_algebra.PrincipalComponentAnalysis6D_get_centroid(self)
10853 def set_centroid(self, cntr):
10854 r"""set_centroid(PrincipalComponentAnalysis6D self, Vector6D cntr)"""
10855 return _IMP_algebra.PrincipalComponentAnalysis6D_set_centroid(self, cntr)
10857 def show(self, *args):
10858 r"""show(PrincipalComponentAnalysis6D self, _ostream out=std::cout)"""
10859 return _IMP_algebra.PrincipalComponentAnalysis6D_show(self, *args)
10861 def __cmp__(self, o):
10862 r"""__cmp__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> int"""
10863 return _IMP_algebra.PrincipalComponentAnalysis6D___cmp__(self, o)
10865 def __eq__(self, o):
10866 r"""__eq__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
10867 return _IMP_algebra.PrincipalComponentAnalysis6D___eq__(self, o)
10869 def __ne__(self, o):
10870 r"""__ne__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
10871 return _IMP_algebra.PrincipalComponentAnalysis6D___ne__(self, o)
10873 def __lt__(self, o):
10874 r"""__lt__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
10875 return _IMP_algebra.PrincipalComponentAnalysis6D___lt__(self, o)
10877 def __gt__(self, o):
10878 r"""__gt__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
10879 return _IMP_algebra.PrincipalComponentAnalysis6D___gt__(self, o)
10881 def __ge__(self, o):
10882 r"""__ge__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
10883 return _IMP_algebra.PrincipalComponentAnalysis6D___ge__(self, o)
10885 def __le__(self, o):
10886 r"""__le__(PrincipalComponentAnalysis6D self, PrincipalComponentAnalysis6D o) -> bool"""
10887 return _IMP_algebra.PrincipalComponentAnalysis6D___le__(self, o)
10890 r"""__str__(PrincipalComponentAnalysis6D self) -> std::string"""
10891 return _IMP_algebra.PrincipalComponentAnalysis6D___str__(self)
10893 def __repr__(self):
10894 r"""__repr__(PrincipalComponentAnalysis6D self) -> std::string"""
10895 return _IMP_algebra.PrincipalComponentAnalysis6D___repr__(self)
10897 def _get_as_binary(self):
10898 r"""_get_as_binary(PrincipalComponentAnalysis6D self) -> PyObject *"""
10899 return _IMP_algebra.PrincipalComponentAnalysis6D__get_as_binary(self)
10901 def _set_from_binary(self, p):
10902 r"""_set_from_binary(PrincipalComponentAnalysis6D self, PyObject * p)"""
10903 return _IMP_algebra.PrincipalComponentAnalysis6D__set_from_binary(self, p)
10905 def __getstate__(self):
10906 p = self._get_as_binary()
10907 if len(self.__dict__) > 1:
10908 d = self.__dict__.copy()
10913 def __setstate__(self, p):
10914 if not hasattr(self,
'this'):
10916 if isinstance(p, tuple):
10918 self.__dict__.update(d)
10919 return self._set_from_binary(p)
10921 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysis6D
10924 _IMP_algebra.PrincipalComponentAnalysis6D_swigregister(PrincipalComponentAnalysis6D)
10925 class PrincipalComponentAnalysisKD(IMP._GeometricPrimitiveKD):
10926 r"""Proxy of C++ IMP::algebra::PrincipalComponentAnalysisD< -1 > class."""
10928 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
10930 def __init__(self, *args):
10932 __init__(PrincipalComponentAnalysisKD self) -> PrincipalComponentAnalysisKD
10933 __init__(PrincipalComponentAnalysisKD self, IMP::Vector< IMP::algebra::VectorD< -1 > > const & pcs, VectorKD values, VectorKD centroid) -> PrincipalComponentAnalysisKD
10935 _IMP_algebra.PrincipalComponentAnalysisKD_swiginit(self, _IMP_algebra.new_PrincipalComponentAnalysisKD(*args))
10938 r"""get_principal_components(PrincipalComponentAnalysisKD self) -> IMP::Vector< IMP::algebra::VectorD< -1 > >"""
10939 return _IMP_algebra.PrincipalComponentAnalysisKD_get_principal_components(self)
10941 def get_principal_component(self, i):
10942 r"""get_principal_component(PrincipalComponentAnalysisKD self, unsigned int i) -> VectorKD"""
10943 return _IMP_algebra.PrincipalComponentAnalysisKD_get_principal_component(self, i)
10945 def get_principal_values(self):
10946 r"""get_principal_values(PrincipalComponentAnalysisKD self) -> VectorKD"""
10947 return _IMP_algebra.PrincipalComponentAnalysisKD_get_principal_values(self)
10949 def get_principal_value(self, i):
10950 r"""get_principal_value(PrincipalComponentAnalysisKD self, unsigned int i) -> double"""
10951 return _IMP_algebra.PrincipalComponentAnalysisKD_get_principal_value(self, i)
10954 r"""get_centroid(PrincipalComponentAnalysisKD self) -> VectorKD"""
10955 return _IMP_algebra.PrincipalComponentAnalysisKD_get_centroid(self)
10957 def set_centroid(self, cntr):
10958 r"""set_centroid(PrincipalComponentAnalysisKD self, VectorKD cntr)"""
10959 return _IMP_algebra.PrincipalComponentAnalysisKD_set_centroid(self, cntr)
10961 def show(self, *args):
10962 r"""show(PrincipalComponentAnalysisKD self, _ostream out=std::cout)"""
10963 return _IMP_algebra.PrincipalComponentAnalysisKD_show(self, *args)
10965 def __cmp__(self, o):
10966 r"""__cmp__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> int"""
10967 return _IMP_algebra.PrincipalComponentAnalysisKD___cmp__(self, o)
10969 def __eq__(self, o):
10970 r"""__eq__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
10971 return _IMP_algebra.PrincipalComponentAnalysisKD___eq__(self, o)
10973 def __ne__(self, o):
10974 r"""__ne__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
10975 return _IMP_algebra.PrincipalComponentAnalysisKD___ne__(self, o)
10977 def __lt__(self, o):
10978 r"""__lt__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
10979 return _IMP_algebra.PrincipalComponentAnalysisKD___lt__(self, o)
10981 def __gt__(self, o):
10982 r"""__gt__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
10983 return _IMP_algebra.PrincipalComponentAnalysisKD___gt__(self, o)
10985 def __ge__(self, o):
10986 r"""__ge__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
10987 return _IMP_algebra.PrincipalComponentAnalysisKD___ge__(self, o)
10989 def __le__(self, o):
10990 r"""__le__(PrincipalComponentAnalysisKD self, PrincipalComponentAnalysisKD o) -> bool"""
10991 return _IMP_algebra.PrincipalComponentAnalysisKD___le__(self, o)
10994 r"""__str__(PrincipalComponentAnalysisKD self) -> std::string"""
10995 return _IMP_algebra.PrincipalComponentAnalysisKD___str__(self)
10997 def __repr__(self):
10998 r"""__repr__(PrincipalComponentAnalysisKD self) -> std::string"""
10999 return _IMP_algebra.PrincipalComponentAnalysisKD___repr__(self)
11001 def _get_as_binary(self):
11002 r"""_get_as_binary(PrincipalComponentAnalysisKD self) -> PyObject *"""
11003 return _IMP_algebra.PrincipalComponentAnalysisKD__get_as_binary(self)
11005 def _set_from_binary(self, p):
11006 r"""_set_from_binary(PrincipalComponentAnalysisKD self, PyObject * p)"""
11007 return _IMP_algebra.PrincipalComponentAnalysisKD__set_from_binary(self, p)
11009 def __getstate__(self):
11010 p = self._get_as_binary()
11011 if len(self.__dict__) > 1:
11012 d = self.__dict__.copy()
11017 def __setstate__(self, p):
11018 if not hasattr(self,
'this'):
11020 if isinstance(p, tuple):
11022 self.__dict__.update(d)
11023 return self._set_from_binary(p)
11025 __swig_destroy__ = _IMP_algebra.delete_PrincipalComponentAnalysisKD
11028 _IMP_algebra.PrincipalComponentAnalysisKD_swigregister(PrincipalComponentAnalysisKD)
11032 get_principal_components(IMP::Vector< IMP::Vector1D,std::allocator< IMP::Vector1D > > const & a) -> PrincipalComponentAnalysis1D
11033 get_principal_components(IMP::Vector< IMP::Vector2D,std::allocator< IMP::Vector2D > > const & a) -> PrincipalComponentAnalysis2D
11034 get_principal_components(IMP::Vector< IMP::Vector3D,std::allocator< IMP::Vector3D > > const & a) -> PrincipalComponentAnalysis3D
11035 get_principal_components(IMP::Vector< IMP::Vector4D,std::allocator< IMP::Vector4D > > const & a) -> PrincipalComponentAnalysis4D
11036 get_principal_components(IMP::Vector< IMP::Vector5D,std::allocator< IMP::Vector5D > > const & a) -> PrincipalComponentAnalysis5D
11037 get_principal_components(IMP::Vector< IMP::Vector6D,std::allocator< IMP::Vector6D > > const & a) -> PrincipalComponentAnalysis6D
11038 get_principal_components(IMP::Vector< IMP::VectorKD,std::allocator< IMP::VectorKD > > const & a) -> PrincipalComponentAnalysisKD
11040 return _IMP_algebra.get_principal_components(*args)
11045 get_distance(Rotation3D r0, Rotation3D r1) -> double
11046 get_distance(Line3D s, Vector3D p) -> double
11047 get_distance(Line3D a, Line3D b) -> double
11048 get_distance(Segment3D s, Vector3D p) -> double
11049 get_distance(Segment3D a, Segment3D b) -> double
11050 get_distance(Plane3D pln, Vector3D p) -> double
11051 get_distance(Vector1D a, Vector1D b) -> double
11052 get_distance(Vector2D a, Vector2D b) -> double
11053 get_distance(Vector3D a, Vector3D b) -> double
11054 get_distance(Vector4D a, Vector4D b) -> double
11055 get_distance(Vector5D a, Vector5D b) -> double
11056 get_distance(Vector6D a, Vector6D b) -> double
11057 get_distance(VectorKD a, VectorKD b) -> double
11058 get_distance(Sphere1D a, Sphere1D b) -> double
11059 get_distance(Sphere2D a, Sphere2D b) -> double
11060 get_distance(Sphere3D a, Sphere3D b) -> double
11061 get_distance(Sphere4D a, Sphere4D b) -> double
11062 get_distance(Sphere5D a, Sphere5D b) -> double
11063 get_distance(Sphere6D a, Sphere6D b) -> double
11064 get_distance(SphereKD a, SphereKD b) -> double
11066 return _IMP_algebra.get_distance(*args)
11070 get_squared_distance()
11071 get_squared_distance(Vector1D a, Vector1D b) -> double
11072 get_squared_distance(Vector2D a, Vector2D b) -> double
11073 get_squared_distance(Vector3D a, Vector3D b) -> double
11074 get_squared_distance(Vector4D a, Vector4D b) -> double
11075 get_squared_distance(Vector5D a, Vector5D b) -> double
11076 get_squared_distance(Vector6D a, Vector6D b) -> double
11077 get_squared_distance(VectorKD a, VectorKD b) -> double
11079 return _IMP_algebra.get_squared_distance(*args)
11081 def get_unit_bounding_box_1d():
11082 r"""get_unit_bounding_box_1d() -> BoundingBox1D"""
11083 return _IMP_algebra.get_unit_bounding_box_1d()
11085 def get_unit_bounding_box_2d():
11086 r"""get_unit_bounding_box_2d() -> BoundingBox2D"""
11087 return _IMP_algebra.get_unit_bounding_box_2d()
11089 def get_unit_bounding_box_3d():
11090 r"""get_unit_bounding_box_3d() -> BoundingBox3D"""
11091 return _IMP_algebra.get_unit_bounding_box_3d()
11093 def get_unit_bounding_box_4d():
11094 r"""get_unit_bounding_box_4d() -> BoundingBox4D"""
11095 return _IMP_algebra.get_unit_bounding_box_4d()
11097 def get_unit_bounding_box_5d():
11098 r"""get_unit_bounding_box_5d() -> BoundingBox5D"""
11099 return _IMP_algebra.get_unit_bounding_box_5d()
11101 def get_unit_bounding_box_6d():
11102 r"""get_unit_bounding_box_6d() -> BoundingBox6D"""
11103 return _IMP_algebra.get_unit_bounding_box_6d()
11105 def get_cube_1d(radius):
11106 r"""get_cube_1d(double radius) -> BoundingBox1D"""
11107 return _IMP_algebra.get_cube_1d(radius)
11109 def get_cube_2d(radius):
11110 r"""get_cube_2d(double radius) -> BoundingBox2D"""
11111 return _IMP_algebra.get_cube_2d(radius)
11113 def get_cube_3d(radius):
11114 r"""get_cube_3d(double radius) -> BoundingBox3D"""
11115 return _IMP_algebra.get_cube_3d(radius)
11117 def get_cube_4d(radius):
11118 r"""get_cube_4d(double radius) -> BoundingBox4D"""
11119 return _IMP_algebra.get_cube_4d(radius)
11121 def get_cube_5d(radius):
11122 r"""get_cube_5d(double radius) -> BoundingBox5D"""
11123 return _IMP_algebra.get_cube_5d(radius)
11125 def get_cube_6d(radius):
11126 r"""get_cube_6d(double radius) -> BoundingBox6D"""
11127 return _IMP_algebra.get_cube_6d(radius)
11129 def get_unit_sphere_1d():
11130 r"""get_unit_sphere_1d() -> Sphere1D"""
11131 return _IMP_algebra.get_unit_sphere_1d()
11133 def get_unit_sphere_2d():
11134 r"""get_unit_sphere_2d() -> Sphere2D"""
11135 return _IMP_algebra.get_unit_sphere_2d()
11137 def get_unit_sphere_3d():
11138 r"""get_unit_sphere_3d() -> Sphere3D"""
11139 return _IMP_algebra.get_unit_sphere_3d()
11141 def get_unit_sphere_4d():
11142 r"""get_unit_sphere_4d() -> Sphere4D"""
11143 return _IMP_algebra.get_unit_sphere_4d()
11145 def get_unit_sphere_5d():
11146 r"""get_unit_sphere_5d() -> Sphere5D"""
11147 return _IMP_algebra.get_unit_sphere_5d()
11149 def get_unit_sphere_6d():
11150 r"""get_unit_sphere_6d() -> Sphere6D"""
11151 return _IMP_algebra.get_unit_sphere_6d()
11155 get_interiors_intersect(Sphere1D a, Sphere1D b) -> bool
11156 get_interiors_intersect(Sphere2D a, Sphere2D b) -> bool
11157 get_interiors_intersect(Sphere3D a, Sphere3D b) -> bool
11158 get_interiors_intersect(Sphere4D a, Sphere4D b) -> bool
11159 get_interiors_intersect(Sphere5D a, Sphere5D b) -> bool
11160 get_interiors_intersect(Sphere6D a, Sphere6D b) -> bool
11161 get_interiors_intersect(SphereKD a, SphereKD b) -> bool
11162 get_interiors_intersect(BoundingBox1D a, BoundingBox1D b) -> bool
11163 get_interiors_intersect(BoundingBox2D a, BoundingBox2D b) -> bool
11164 get_interiors_intersect(BoundingBox3D a, BoundingBox3D b) -> bool
11165 get_interiors_intersect(BoundingBox4D a, BoundingBox4D b) -> bool
11166 get_interiors_intersect(BoundingBox5D a, BoundingBox5D b) -> bool
11167 get_interiors_intersect(BoundingBox6D a, BoundingBox6D b) -> bool
11168 get_interiors_intersect(BoundingBoxKD a, BoundingBoxKD b) -> bool
11170 return _IMP_algebra.get_interiors_intersect(*args)
11174 get_random_vector_on(Sphere1D a) -> Vector1D
11175 get_random_vector_on(Sphere2D a) -> Vector2D
11176 get_random_vector_on(Sphere3D a) -> Vector3D
11177 get_random_vector_on(Sphere4D a) -> Vector4D
11178 get_random_vector_on(Sphere5D a) -> Vector5D
11179 get_random_vector_on(Sphere6D a) -> Vector6D
11180 get_random_vector_on(SphereKD a) -> VectorKD
11181 get_random_vector_on(UnitSimplex1D a) -> Vector1D
11182 get_random_vector_on(UnitSimplex2D a) -> Vector2D
11183 get_random_vector_on(UnitSimplex3D a) -> Vector3D
11184 get_random_vector_on(UnitSimplex4D a) -> Vector4D
11185 get_random_vector_on(UnitSimplex5D a) -> Vector5D
11186 get_random_vector_on(UnitSimplex6D a) -> Vector6D
11187 get_random_vector_on(UnitSimplexKD a) -> VectorKD
11188 get_random_vector_on(BoundingBox1D a) -> Vector1D
11189 get_random_vector_on(BoundingBox2D a) -> Vector2D
11190 get_random_vector_on(BoundingBox3D a) -> Vector3D
11191 get_random_vector_on(BoundingBox4D a) -> Vector4D
11192 get_random_vector_on(BoundingBox5D a) -> Vector5D
11193 get_random_vector_on(BoundingBox6D a) -> Vector6D
11194 get_random_vector_on(BoundingBoxKD a) -> VectorKD
11196 return _IMP_algebra.get_random_vector_on(*args)
11200 get_random_vector_in(Cylinder3D c) -> Vector3D
11201 get_random_vector_in(Sphere1D a) -> Vector1D
11202 get_random_vector_in(Sphere2D a) -> Vector2D
11203 get_random_vector_in(Sphere3D a) -> Vector3D
11204 get_random_vector_in(Sphere4D a) -> Vector4D
11205 get_random_vector_in(Sphere5D a) -> Vector5D
11206 get_random_vector_in(Sphere6D a) -> Vector6D
11207 get_random_vector_in(SphereKD a) -> VectorKD
11208 get_random_vector_in(BoundingBox1D a) -> Vector1D
11209 get_random_vector_in(BoundingBox2D a) -> Vector2D
11210 get_random_vector_in(BoundingBox3D a) -> Vector3D
11211 get_random_vector_in(BoundingBox4D a) -> Vector4D
11212 get_random_vector_in(BoundingBox5D a) -> Vector5D
11213 get_random_vector_in(BoundingBox6D a) -> Vector6D
11214 get_random_vector_in(BoundingBoxKD a) -> VectorKD
11216 return _IMP_algebra.get_random_vector_in(*args)
11220 get_intersection(BoundingBox1D a, BoundingBox1D b) -> BoundingBox1D
11221 get_intersection(BoundingBox2D a, BoundingBox2D b) -> BoundingBox2D
11222 get_intersection(BoundingBox3D a, BoundingBox3D b) -> BoundingBox3D
11223 get_intersection(BoundingBox4D a, BoundingBox4D b) -> BoundingBox4D
11224 get_intersection(BoundingBox5D a, BoundingBox5D b) -> BoundingBox5D
11225 get_intersection(BoundingBox6D a, BoundingBox6D b) -> BoundingBox6D
11226 get_intersection(BoundingBoxKD a, BoundingBoxKD b) -> BoundingBoxKD
11228 return _IMP_algebra.get_intersection(*args)
11232 get_union(BoundingBox1D a, BoundingBox1D b) -> BoundingBox1D
11233 get_union(BoundingBox2D a, BoundingBox2D b) -> BoundingBox2D
11234 get_union(BoundingBox3D a, BoundingBox3D b) -> BoundingBox3D
11235 get_union(BoundingBox4D a, BoundingBox4D b) -> BoundingBox4D
11236 get_union(BoundingBox5D a, BoundingBox5D b) -> BoundingBox5D
11237 get_union(BoundingBox6D a, BoundingBox6D b) -> BoundingBox6D
11238 get_union(BoundingBoxKD a, BoundingBoxKD b) -> BoundingBoxKD
11240 return _IMP_algebra.get_union(*args)
11242 def get_bounding_box(*args):
11244 get_bounding_box(Line3D g) -> BoundingBox3D
11245 get_bounding_box(Segment3D g) -> BoundingBox3D
11246 get_bounding_box(Plane3D g) -> BoundingBox3D
11247 get_bounding_box(Cylinder3D g) -> BoundingBox3D
11248 get_bounding_box(Ellipsoid3D g) -> BoundingBox3D
11249 get_bounding_box(SpherePatch3D g) -> BoundingBox3D
11250 get_bounding_box(Cone3D g) -> BoundingBox3D
11251 get_bounding_box(Sphere1D a) -> BoundingBox1D
11252 get_bounding_box(Sphere2D a) -> BoundingBox2D
11253 get_bounding_box(Sphere3D a) -> BoundingBox3D
11254 get_bounding_box(Sphere4D a) -> BoundingBox4D
11255 get_bounding_box(Sphere5D a) -> BoundingBox5D
11256 get_bounding_box(Sphere6D a) -> BoundingBox6D
11257 get_bounding_box(SphereKD a) -> BoundingBoxKD
11259 return _IMP_algebra.get_bounding_box(*args)
11263 get_uniform_surface_cover(Cylinder3D cyl, int number_of_points) -> IMP::algebra::Vector3Ds
11264 get_uniform_surface_cover(SpherePatch3D sph, unsigned int number_of_points) -> IMP::algebra::Vector3Ds
11265 get_uniform_surface_cover(Cone3D cone, unsigned int number_of_points) -> IMP::algebra::Vector3Ds
11266 get_uniform_surface_cover(IMP::algebra::Sphere3Ds const & _in, double points_per_square_angstrom) -> IMP::algebra::Vector3Ds
11267 get_uniform_surface_cover(Sphere1D a, unsigned int const & b) -> IMP::algebra::Vector1Ds
11268 get_uniform_surface_cover(Sphere2D a, unsigned int const & b) -> IMP::algebra::Vector2Ds
11269 get_uniform_surface_cover(Sphere3D a, unsigned int const & b) -> IMP::algebra::Vector3Ds
11270 get_uniform_surface_cover(Sphere4D a, unsigned int const & b) -> IMP::algebra::Vector4Ds
11271 get_uniform_surface_cover(Sphere5D a, unsigned int const & b) -> IMP::algebra::Vector5Ds
11272 get_uniform_surface_cover(Sphere6D a, unsigned int const & b) -> IMP::algebra::Vector6Ds
11273 get_uniform_surface_cover(SphereKD a, unsigned int const & b) -> IMP::algebra::VectorKDs
11275 return _IMP_algebra.get_uniform_surface_cover(*args)
11279 get_grid_interior_cover_by_spacing(BoundingBox1D a, double const & b) -> IMP::algebra::Vector1Ds
11280 get_grid_interior_cover_by_spacing(BoundingBox2D a, double const & b) -> IMP::algebra::Vector2Ds
11281 get_grid_interior_cover_by_spacing(BoundingBox3D a, double const & b) -> IMP::algebra::Vector3Ds
11282 get_grid_interior_cover_by_spacing(BoundingBox4D a, double const & b) -> IMP::algebra::Vector4Ds
11283 get_grid_interior_cover_by_spacing(BoundingBox5D a, double const & b) -> IMP::algebra::Vector5Ds
11284 get_grid_interior_cover_by_spacing(BoundingBox6D a, double const & b) -> IMP::algebra::Vector6Ds
11285 get_grid_interior_cover_by_spacing(BoundingBoxKD a, double const & b) -> IMP::algebra::VectorKDs
11287 return _IMP_algebra.get_grid_interior_cover_by_spacing(*args)
11291 get_projected(Line3D l, Vector3D p) -> Vector3D
11292 get_projected(Line3D l, Segment3D s) -> Segment3D
11293 get_projected(UnitSimplex1D a, Vector1D b) -> Vector1D
11294 get_projected(UnitSimplex2D a, Vector2D b) -> Vector2D
11295 get_projected(UnitSimplex3D a, Vector3D b) -> Vector3D
11296 get_projected(UnitSimplex4D a, Vector4D b) -> Vector4D
11297 get_projected(UnitSimplex5D a, Vector5D b) -> Vector5D
11298 get_projected(UnitSimplex6D a, Vector6D b) -> Vector6D
11299 get_projected(UnitSimplexKD a, VectorKD b) -> VectorKD
11301 return _IMP_algebra.get_projected(*args)
11305 get_vertices(BoundingBox1D a) -> IMP::Vector< IMP::Vector1D,std::allocator< IMP::Vector1D > >
11306 get_vertices(BoundingBox2D a) -> IMP::Vector< IMP::Vector2D,std::allocator< IMP::Vector2D > >
11307 get_vertices(BoundingBox3D a) -> IMP::Vector< IMP::Vector3D,std::allocator< IMP::Vector3D > >
11308 get_vertices(BoundingBox4D a) -> IMP::Vector< IMP::Vector4D,std::allocator< IMP::Vector4D > >
11309 get_vertices(BoundingBox5D a) -> IMP::Vector< IMP::Vector5D,std::allocator< IMP::Vector5D > >
11310 get_vertices(BoundingBox6D a) -> IMP::Vector< IMP::Vector6D,std::allocator< IMP::Vector6D > >
11311 get_vertices(BoundingBoxKD a) -> IMP::Vector< IMP::VectorKD,std::allocator< IMP::VectorKD > >
11312 get_vertices(UnitSimplex1D a) -> IMP::Vector< IMP::Vector1D,std::allocator< IMP::Vector1D > >
11313 get_vertices(UnitSimplex2D a) -> IMP::Vector< IMP::Vector2D,std::allocator< IMP::Vector2D > >
11314 get_vertices(UnitSimplex3D a) -> IMP::Vector< IMP::Vector3D,std::allocator< IMP::Vector3D > >
11315 get_vertices(UnitSimplex4D a) -> IMP::Vector< IMP::Vector4D,std::allocator< IMP::Vector4D > >
11316 get_vertices(UnitSimplex5D a) -> IMP::Vector< IMP::Vector5D,std::allocator< IMP::Vector5D > >
11317 get_vertices(UnitSimplex6D a) -> IMP::Vector< IMP::Vector6D,std::allocator< IMP::Vector6D > >
11318 get_vertices(UnitSimplexKD a) -> IMP::Vector< IMP::VectorKD,std::allocator< IMP::VectorKD > >
11320 return _IMP_algebra.get_vertices(*args)
11324 get_increasing_from_embedded(UnitSimplex1D a, Vector1D b) -> Vector1D
11325 get_increasing_from_embedded(UnitSimplex2D a, Vector2D b) -> Vector2D
11326 get_increasing_from_embedded(UnitSimplex3D a, Vector3D b) -> Vector3D
11327 get_increasing_from_embedded(UnitSimplex4D a, Vector4D b) -> Vector4D
11328 get_increasing_from_embedded(UnitSimplex5D a, Vector5D b) -> Vector5D
11329 get_increasing_from_embedded(UnitSimplex6D a, Vector6D b) -> Vector6D
11330 get_increasing_from_embedded(UnitSimplexKD a, VectorKD b) -> VectorKD
11332 return _IMP_algebra.get_increasing_from_embedded(*args)
11336 get_embedded_from_increasing(UnitSimplex1D a, Vector1D b) -> Vector1D
11337 get_embedded_from_increasing(UnitSimplex2D a, Vector2D b) -> Vector2D
11338 get_embedded_from_increasing(UnitSimplex3D a, Vector3D b) -> Vector3D
11339 get_embedded_from_increasing(UnitSimplex4D a, Vector4D b) -> Vector4D
11340 get_embedded_from_increasing(UnitSimplex5D a, Vector5D b) -> Vector5D
11341 get_embedded_from_increasing(UnitSimplex6D a, Vector6D b) -> Vector6D
11342 get_embedded_from_increasing(UnitSimplexKD a, VectorKD b) -> VectorKD
11344 return _IMP_algebra.get_embedded_from_increasing(*args)
11345 class _AxisAnglePair(object):
11346 r"""Proxy of C++ std::pair< IMP::VectorD< 3 >,double > class."""
11348 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11349 __repr__ = _swig_repr
11351 def __init__(self, *args):
11353 __init__(_AxisAnglePair self) -> _AxisAnglePair
11354 __init__(_AxisAnglePair self, Vector3D first, double second) -> _AxisAnglePair
11355 __init__(_AxisAnglePair self, _AxisAnglePair other) -> _AxisAnglePair
11357 _IMP_algebra._AxisAnglePair_swiginit(self, _IMP_algebra.new__AxisAnglePair(*args))
11358 first = property(_IMP_algebra._AxisAnglePair_first_get, _IMP_algebra._AxisAnglePair_first_set, doc=
r"""first : IMP::VectorD<(3)>""")
11359 second = property(_IMP_algebra._AxisAnglePair_second_get, _IMP_algebra._AxisAnglePair_second_set, doc=
r"""second : double""")
11362 def __repr__(self):
11363 return str((self.first, self.second))
11364 def __getitem__(self, index):
11365 if not (index % 2):
11369 def __setitem__(self, index, val):
11370 if not (index % 2):
11374 __swig_destroy__ = _IMP_algebra.delete__AxisAnglePair
11377 _IMP_algebra._AxisAnglePair_swigregister(_AxisAnglePair)
11380 r"""get_transformation_aligning_first_to_second(IMP::Vector< IMP::VectorD< 3 >,std::allocator< IMP::VectorD< 3 > > > const & source, IMP::Vector< IMP::VectorD< 3 >,std::allocator< IMP::VectorD< 3 > > > const & target) -> Transformation3D"""
11381 return _IMP_algebra.get_transformation_aligning_first_to_second(source, target)
11382 class _RotatedVector3DAdjoint(object):
11383 r"""Proxy of C++ std::pair< IMP::VectorD< 3 >,IMP::VectorD< 4 > > class."""
11385 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11386 __repr__ = _swig_repr
11388 def __init__(self, *args):
11390 __init__(_RotatedVector3DAdjoint self) -> _RotatedVector3DAdjoint
11391 __init__(_RotatedVector3DAdjoint self, Vector3D first, Vector4D second) -> _RotatedVector3DAdjoint
11392 __init__(_RotatedVector3DAdjoint self, _RotatedVector3DAdjoint other) -> _RotatedVector3DAdjoint
11394 _IMP_algebra._RotatedVector3DAdjoint_swiginit(self, _IMP_algebra.new__RotatedVector3DAdjoint(*args))
11395 first = property(_IMP_algebra._RotatedVector3DAdjoint_first_get, _IMP_algebra._RotatedVector3DAdjoint_first_set, doc=
r"""first : IMP::VectorD<(3)>""")
11396 second = property(_IMP_algebra._RotatedVector3DAdjoint_second_get, _IMP_algebra._RotatedVector3DAdjoint_second_set, doc=
r"""second : IMP::VectorD<(4)>""")
11399 def __repr__(self):
11400 return str((self.first, self.second))
11401 def __getitem__(self, index):
11402 if not (index % 2):
11406 def __setitem__(self, index, val):
11407 if not (index % 2):
11411 __swig_destroy__ = _IMP_algebra.delete__RotatedVector3DAdjoint
11414 _IMP_algebra._RotatedVector3DAdjoint_swigregister(_RotatedVector3DAdjoint)
11415 class _ComposeRotation3DAdjoint(object):
11416 r"""Proxy of C++ std::pair< IMP::VectorD< 4 >,IMP::VectorD< 4 > > class."""
11418 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11419 __repr__ = _swig_repr
11421 def __init__(self, *args):
11423 __init__(_ComposeRotation3DAdjoint self) -> _ComposeRotation3DAdjoint
11424 __init__(_ComposeRotation3DAdjoint self, Vector4D first, Vector4D second) -> _ComposeRotation3DAdjoint
11425 __init__(_ComposeRotation3DAdjoint self, _ComposeRotation3DAdjoint other) -> _ComposeRotation3DAdjoint
11427 _IMP_algebra._ComposeRotation3DAdjoint_swiginit(self, _IMP_algebra.new__ComposeRotation3DAdjoint(*args))
11428 first = property(_IMP_algebra._ComposeRotation3DAdjoint_first_get, _IMP_algebra._ComposeRotation3DAdjoint_first_set, doc=
r"""first : IMP::VectorD<(4)>""")
11429 second = property(_IMP_algebra._ComposeRotation3DAdjoint_second_get, _IMP_algebra._ComposeRotation3DAdjoint_second_set, doc=
r"""second : IMP::VectorD<(4)>""")
11432 def __repr__(self):
11433 return str((self.first, self.second))
11434 def __getitem__(self, index):
11435 if not (index % 2):
11439 def __setitem__(self, index, val):
11440 if not (index % 2):
11444 __swig_destroy__ = _IMP_algebra.delete__ComposeRotation3DAdjoint
11447 _IMP_algebra._ComposeRotation3DAdjoint_swigregister(_ComposeRotation3DAdjoint)
11448 class _Transformation3DAdjoint(object):
11449 r"""Proxy of C++ std::pair< IMP::VectorD< 4 >,IMP::VectorD< 3 > > class."""
11451 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11452 __repr__ = _swig_repr
11454 def __init__(self, *args):
11456 __init__(_Transformation3DAdjoint self) -> _Transformation3DAdjoint
11457 __init__(_Transformation3DAdjoint self, Vector4D first, Vector3D second) -> _Transformation3DAdjoint
11458 __init__(_Transformation3DAdjoint self, _Transformation3DAdjoint other) -> _Transformation3DAdjoint
11460 _IMP_algebra._Transformation3DAdjoint_swiginit(self, _IMP_algebra.new__Transformation3DAdjoint(*args))
11461 first = property(_IMP_algebra._Transformation3DAdjoint_first_get, _IMP_algebra._Transformation3DAdjoint_first_set, doc=
r"""first : IMP::VectorD<(4)>""")
11462 second = property(_IMP_algebra._Transformation3DAdjoint_second_get, _IMP_algebra._Transformation3DAdjoint_second_set, doc=
r"""second : IMP::VectorD<(3)>""")
11465 def __repr__(self):
11466 return str((self.first, self.second))
11467 def __getitem__(self, index):
11468 if not (index % 2):
11472 def __setitem__(self, index, val):
11473 if not (index % 2):
11477 __swig_destroy__ = _IMP_algebra.delete__Transformation3DAdjoint
11480 _IMP_algebra._Transformation3DAdjoint_swigregister(_Transformation3DAdjoint)
11481 class _TransformedVector3DAdjoint(object):
11482 r"""Proxy of C++ std::pair< IMP::VectorD< 3 >,std::pair< IMP::VectorD< 4 >,IMP::VectorD< 3 > > > class."""
11484 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11485 __repr__ = _swig_repr
11487 def __init__(self, *args):
11489 __init__(_TransformedVector3DAdjoint self) -> _TransformedVector3DAdjoint
11490 __init__(_TransformedVector3DAdjoint self, Vector3D first, _Transformation3DAdjoint second) -> _TransformedVector3DAdjoint
11491 __init__(_TransformedVector3DAdjoint self, _TransformedVector3DAdjoint other) -> _TransformedVector3DAdjoint
11493 _IMP_algebra._TransformedVector3DAdjoint_swiginit(self, _IMP_algebra.new__TransformedVector3DAdjoint(*args))
11494 first = property(_IMP_algebra._TransformedVector3DAdjoint_first_get, _IMP_algebra._TransformedVector3DAdjoint_first_set, doc=
r"""first : IMP::VectorD<(3)>""")
11495 second = property(_IMP_algebra._TransformedVector3DAdjoint_second_get, _IMP_algebra._TransformedVector3DAdjoint_second_set, doc=
r"""second : std::pair<(IMP::VectorD<(4)>,IMP::VectorD<(3)>)>""")
11498 def __repr__(self):
11499 return str((self.first, self.second))
11500 def __getitem__(self, index):
11501 if not (index % 2):
11505 def __setitem__(self, index, val):
11506 if not (index % 2):
11510 __swig_destroy__ = _IMP_algebra.delete__TransformedVector3DAdjoint
11513 _IMP_algebra._TransformedVector3DAdjoint_swigregister(_TransformedVector3DAdjoint)
11514 class _ComposeTransformation3DAdjoint(object):
11515 r"""Proxy of C++ std::pair< std::pair< IMP::VectorD< 4 >,IMP::VectorD< 3 > >,std::pair< IMP::VectorD< 4 >,IMP::VectorD< 3 > > > class."""
11517 thisown = property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
"The membership flag")
11518 __repr__ = _swig_repr
11520 def __init__(self, *args):
11522 __init__(_ComposeTransformation3DAdjoint self) -> _ComposeTransformation3DAdjoint
11523 __init__(_ComposeTransformation3DAdjoint self, _Transformation3DAdjoint first, _Transformation3DAdjoint second) -> _ComposeTransformation3DAdjoint
11524 __init__(_ComposeTransformation3DAdjoint self, _ComposeTransformation3DAdjoint other) -> _ComposeTransformation3DAdjoint
11526 _IMP_algebra._ComposeTransformation3DAdjoint_swiginit(self, _IMP_algebra.new__ComposeTransformation3DAdjoint(*args))
11527 first = property(_IMP_algebra._ComposeTransformation3DAdjoint_first_get, _IMP_algebra._ComposeTransformation3DAdjoint_first_set, doc=
r"""first : std::pair<(IMP::VectorD<(4)>,IMP::VectorD<(3)>)>""")
11528 second = property(_IMP_algebra._ComposeTransformation3DAdjoint_second_get, _IMP_algebra._ComposeTransformation3DAdjoint_second_set, doc=
r"""second : std::pair<(IMP::VectorD<(4)>,IMP::VectorD<(3)>)>""")
11531 def __repr__(self):
11532 return str((self.first, self.second))
11533 def __getitem__(self, index):
11534 if not (index % 2):
11538 def __setitem__(self, index, val):
11539 if not (index % 2):
11543 __swig_destroy__ = _IMP_algebra.delete__ComposeTransformation3DAdjoint
11546 _IMP_algebra._ComposeTransformation3DAdjoint_swigregister(_ComposeTransformation3DAdjoint)
11549 r"""get_rmsd_transforming_first(Transformation3D tr, IMP::algebra::Vector3Ds const & v0, IMP::algebra::Vector3Ds const & v1) -> double"""
11550 return _IMP_algebra.get_rmsd_transforming_first(tr, v0, v1)
11553 r"""get_rmsd(IMP::algebra::Vector3Ds const & v0, IMP::algebra::Vector3Ds const & v1) -> double"""
11554 return _IMP_algebra.get_rmsd(v0, v1)
11556 def get_weighted_rmsd_transforming_first(tr, v0, v1, weights):
11557 r"""get_weighted_rmsd_transforming_first(Transformation3D tr, IMP::algebra::Vector3Ds const & v0, IMP::algebra::Vector3Ds const & v1, IMP::Floats const & weights) -> double"""
11558 return _IMP_algebra.get_weighted_rmsd_transforming_first(tr, v0, v1, weights)
11561 r"""get_weighted_rmsd(IMP::algebra::Vector3Ds const & v0, IMP::algebra::Vector3Ds const & v1, IMP::Floats const & weights) -> double"""
11562 return _IMP_algebra.get_weighted_rmsd(v0, v1, weights)
11564 LinearFit=LinearFit2D
11565 ParabolicFit=ParabolicFit2D
11568 def __setup_vector_d_aliases():
11569 for n
in "123456K":
11570 for func
in (
'get_basis_vector',
'get_zero_vector',
11571 'get_ones_vector'):
11572 funcname = func +
"_" + n.lower() +
'd'
11573 globals()[funcname] = getattr(IMP, funcname)
11574 for cls
in (
'Vector' + n +
'D',
'Vector' + n +
'Ds'):
11575 globals()[cls] = getattr(IMP, cls)
11577 __setup_vector_d_aliases()
11579 get_vector_product = IMP.get_vector_product
11580 get_orthogonal_vector = IMP.get_orthogonal_vector
11581 get_centroid = IMP.get_centroid
11582 get_radius_of_gyration = IMP.get_radius_of_gyration
11585 def get_module_name():
11586 r"""get_module_name() -> std::string const"""
11587 return _IMP_algebra.get_module_name()
11590 r"""get_module_version() -> std::string const"""
11591 return _IMP_algebra.get_module_version()
11594 r"""get_example_path(std::string fname) -> std::string"""
11595 return _IMP_algebra.get_example_path(fname)
11598 r"""get_data_path(std::string fname) -> std::string"""
11599 return _IMP_algebra.get_data_path(fname)
11601 from .
import _version_check
bool get_is_big_endian()
Returns 1 if machine is big endian else 0.
BoundingBoxD<-1 > BoundingBoxKD
Typedef for Python.
Rotation3D get_rotation_about_normalized_axis(const Vector3D &axis_norm, double angle)
double get_height(const Surface &s, const XYZR &d)
Get height of sphere above surface.
Transformation2D get_transformation_aligning_pair(const Vector2Ds &set_from, const Vector2Ds &set_to)
Grid3D< float, DenseGridStorage3D< float > > DenseFloatGrid3D
SphereD< 4 > Sphere4D
Typedef for Python.
SphereD< 3 > Sphere3D
Typedef for Python.
VectorD< D > get_random_vector_on(const BoundingBoxD< D > &bb)
Generate a random vector on a box with uniform density.
void write_pts(const Vector3Ds &vs, TextOutput out)
Write a set of 3D vectors to a file.
Grid3D< int, SparseGridStorage3D< int, UnboundedGridStorage3D > > SparseUnboundedIntGrid3D
Rotation3D get_rotation_from_x_y_axes(const Vector3D &x, const Vector3D &y)
BoundingBoxD< 3 > BoundingBox3D
Typedef for Python.
Rotation3D get_rotation_from_fixed_xyz(double xr, double yr, double zr)
Initialize a rotation in x-y-z order from three angles.
void compose_adjoint(const Rotation3D &A, const Rotation3D &B, Vector4D DC, Rotation3DAdjoint *DA, Rotation3DAdjoint *DB)
Get adjoint of inputs to compose from adjoint of output.
VectorD< 3 > get_random_vector_on_unit_sphere()
DenseGrid3D< double > get_rasterized(const Gaussian3Ds &gmm, const Floats &weights, double cell_width, const BoundingBox3D &bb)
Rasterize the Gaussians to a grid.
Vector3Ds get_random_chain(unsigned int n, double r, const Vector3D &start=Vector3D(0, 0, 0), const Sphere3Ds &obstacles=Sphere3Ds())
Generate a random chain with no collisions.
Rotation2D compose(const Rotation2D &a, const Rotation2D &b)
Compose two rotations a and b.
Sphere3D get_enclosing_sphere(const Sphere3Ds &ss)
Return a sphere containing the listed spheres.
Vector< VectorD< D > > get_uniform_surface_cover(const SphereD< D > &s, unsigned int n)
Generate a set of vectors which covers a sphere uniformly.
algebra::Rotation3Ds get_uniformly_sampled_rotations(double delta)
Generates a nondegenerate set of Euler angles with a delta resolution.
Vector< VectorD< D > > get_vertices(const BoundingBoxD< D > &bb)
Return a list of the 2^D bounding points for the bounding box.
bool get_is_little_endian()
Returns 1 if machine is little endian else 0.
Triangle3D get_largest_triangle(const Vector3Ds &points)
Return the largest triangle defined by 3 points from the input.
An exception for an invalid usage of IMP.
Make CGAL functionality available to IMP.
Gaussian3D get_gaussian_from_covariance(const Eigen::Matrix3d &covariance, const Vector3D ¢er)
Return a Gaussian centered at the origin from a covariance matrix.
IntPairs get_edges(const BoundingBoxD< 3 > &)
Return the edges of the box as indices into the vertices list.
PrincipalComponentAnalysisD< D > get_principal_components(const Vector< VectorD< D >> &ps)
Perform principal components analysis on a set of vectors.
double get_area(const Geometry &)
Compute the area of any surface object.
BoundingBoxD< 5 > BoundingBox5D
Typedef for Python.
SphereD< 2 > Sphere2D
Typedef for Python.
BoundingBoxD< D > get_union(BoundingBoxD< D > a, const BoundingBoxD< D > &b)
Return the union bounding box.
Transformation3D get_transformation_from_first_triangle_to_second(Triangle3D first_tri, Triangle3D second_tri)
Return a transformation between two triangles.
double get_ball_radius_from_volume_3d(double volume)
Return the radius of a sphere with a given volume.
double get_weighted_rmsd(const Vector3DsOrXYZs0 &m1, const Vector3DsOrXYZs1 &m2, const Floats &weights)
Vector3D get_reflected(const Plane3D &pln, const Vector3D &p)
Return the point reflected about the plane.
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
Grid3D< double, DenseGridStorage3D< double > > DenseDoubleGrid3D
Atom get_atom(Residue rd, AtomType at)
Return a particle atom from the residue.
Vector3D get_centroid(const Vector3Ds &ps)
Return the centroid of a set of vectors.
Eigen::MatrixXd get_jacobian_of_composed_wrt_first(const Rotation3D &q, const Rotation3D &p, bool wrt_unnorm=false)
Get gradient of quaternion product with respect to first quaternion.
double get_angle(const Line3D &a, const Line3D &b)
Get angle in radians between two lines around their closest points.
BoundingBoxD< 2 > BoundingBox2D
Typedef for Python.
Rotation3D get_rotation_about_axis(const Vector3D &axis, double angle)
Generate a Rotation3D object from a rotation around an axis.
Segment3D get_shortest_segment(const Segment3D &s, const Vector3D &p)
Vector3Ds read_pts(TextInput input)
Read a set of 3D vectors from a file.
BoundingBoxD< D > get_intersection(const BoundingBoxD< D > &a, const BoundingBoxD< D > &b)
Return the intersecting bounding box.
IMP::algebra::Transformation3D get_transformation_aligning_first_to_second(const Vector3DsOrXYZs0 &source, const Vector3DsOrXYZs1 &target)
Compute the rigid transform bringing the first point set to the second.
Transformation2D get_rotation_about_point(const Vector2D &point, const Rotation2D &rotation)
Generate a Transformation2D object from a rotation around a point.
double get_volume(const BoundingBoxD< D > &bb)
See BoundingBoxD.
Rotation3D get_random_rotation_3d()
Pick a rotation at random from all possible rotations.
bool get_interiors_intersect(const BoundingBoxD< D > &a, const BoundingBoxD< D > &b)
Return true if they intersect.
VectorD< D > get_increasing_from_embedded(const UnitSimplexD< D > &s, const VectorD< D > &p)
Convert point on simplex from embedded to increasing coordinates.
Ints get_index(const ParticlesTemp &particles, const Subset &subset, const Subsets &excluded)
Common base class for heavy weight IMP objects.
VectorD< D > get_embedded_from_increasing(const UnitSimplexD< D > &s, const VectorD< D > &p)
Convert point on simplex from increasing to embedded coordinates.
FixedXYZ get_fixed_xyz_from_rotation(const Rotation3D &r)
The inverse of rotation_from_fixed_xyz()
bool get_are_colinear(const Vector3D &p1, const Vector3D &p2, const Vector3D &p3)
Return true if the three points are co-linear.
BoundingBoxD< 4 > BoundingBox4D
Typedef for Python.
Rotation2D get_identity_rotation_2d()
Build an identity rotation in 2D.
Sphere3Ds read_spheres(TextInput input)
Read a set of 3D spheres from a file.
Vector3D get_projected(const Line3D &l, const Vector3D &p)
Project a point onto the line.
Rotation3D get_rotation_from_fixed_zyz(double Rot, double Tilt, double Psi)
Generate a rotation object from Euler Angles.
SphereD< 6 > Sphere6D
Typedef for Python.
double get_rmsd(const Vector3DsOrXYZs0 &m1, const Vector3DsOrXYZs1 &m2)
VectorD< D > get_random_vector_in(const BoundingBoxD< D > &bb)
Generate a random vector in a box with uniform density.
double get_squared_distance(const VectorD< D > &v1, const VectorD< D > &v2)
Compute the squared distance between two vectors.
SphereD< 5 > Sphere5D
Typedef for Python.
double get_distance(const VectorD< D > &v1, const VectorD< D > &v2)
Compute the distance between two vectors.
BoundingBoxD<-1 > get_unit_bounding_box_kd(unsigned int d)
Box with radius one.
std::pair< Vector3D, double > get_axis_and_angle(const Rotation3D &rot)
Decompose a Rotation3D object into a rotation around an axis.
FloatPair get_surface_area_and_volume(const algebra::Sphere3Ds &ss)
Get surface area & volume of the union of the balls bounded by the spheres.
Transformation3Ds get_alignments_from_first_to_second(const PrincipalComponentAnalysisD< 3 > &pca1, const PrincipalComponentAnalysisD< 3 > &pca2)
Get all alignments of the first principal component system to the second one.
SphereD< 1 > Sphere1D
Typedef for Python.
Rotation3D get_interpolated(const Rotation3D &a, const Rotation3D &b, double f)
Interpolate between two rotations.
Rotation3D get_rotation_from_vector4d(const VectorD< 4 > &v)
Compute a rotation from an unnormalized quaternion.
BoundingBoxD<-1 > get_cube_kd(unsigned int d, double radius)
Cube with radius of length side.
Rotation3D get_rotation_taking_first_to_second(const Vector3D &v1, const Vector3D &v2)
Create a rotation from the first vector to the second one.
Rotation3Ds get_uniform_cover_rotations_3d(unsigned int num_points)
Cover the space of rotations evenly.
Rotation2D get_rotation_to_x_axis(const Vector2D &v)
std::ostream & show(Hierarchy h, std::ostream &out=std::cout)
Print the hierarchy using a given decorator to display each node.
Transformation3D get_identity_transformation_3d()
Return a transformation that does not do anything.
Eigen::MatrixXd get_jacobian_of_composed_wrt_second(const Rotation3D &q, const Rotation3D &p, bool wrt_unnorm=false)
Get Jacobian of quaternion product with respect to second quaternion.
void reversed_read(void *dest, size_t size, size_t nitems, std::ifstream &f, bool reverse)
Reads from file in normal or reverse order.
Rotation3D get_rotation_from_matrix(double m00, double m01, double m02, double m10, double m11, double m12, double m20, double m21, double m22)
Generate a Rotation3D object from a rotation matrix.
Transformation3D get_transformation_3d(const Transformation2D &t2d)
Build a 3D transformation from a 2D one.
double get_relative_projection_on_segment(const Segment3D &s, const algebra::Vector3D &p)
Return the 'relative' projection of a point p onto the line that contains s.
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
Eigen::Matrix3d get_covariance(const Gaussian3D &g)
Rotation3D get_identity_rotation_3d()
Return a rotation that does not do anything.
void write_spheres(const Sphere3Ds &vs, TextOutput out)
Write a set of 3D spheres to a file.
Sphere3Ds get_simplified_from_volume(Sphere3Ds in, double maximum_allowed_error_angstroms)
Get a set of balls that approximates the surface of the passed set.
void reversed_write(const void *src, size_t size, size_t nitems, std::ofstream &f, bool reverse=false)
Writes to a file in normal or reversed order.
algebra::Segment3D get_segment_connecting_first_to_second(const Line3D &a, const Line3D &b)
Get shortest possible segment from the first line to the second.
Vector< VectorD< D > > get_grid_interior_cover_by_spacing(const BoundingBoxD< D > &bb, double s)
DenseGrid3D< double > get_rasterized_fast(const Gaussian3Ds &gmm, const Floats &weights, double cell_width, const BoundingBox3D &bb, double factor=2.5)
Rasterize the Gaussians to a grid.
double get_surface_area(const Geometry &)
Compute the surface area of any volumetric object.
double get_rmsd_transforming_first(const Transformation3D &tr, const Vector3DsOrXYZs0 &m1, const Vector3DsOrXYZs1 &m2)
Calculate the root mean square deviation between two sets of 3D points.
BoundingBoxD< 6 > BoundingBox6D
Typedef for Python.
SphereD<-1 > SphereKD
Typedef for Python.
ParticleIndexes get_indexes(const ParticlesTemp &ps)
Get the indexes from a list of particles.
DensityMap * get_segment(DensityMap *map_to_segment, int nx_start, int nx_end, int ny_start, int ny_end, int nz_start, int nz_end)
Get a segment of the map according to xyz indexes.
Vector3Ds get_grid_surface_cover(const Cylinder3D &cyl, int number_of_cycles, int number_of_points_on_cycle)
Generate a grid of 3d points on a cylinder surface.
Rotation3D get_rotation_from_fixed_zxz(double phi, double theta, double psi)
Initialize a rotation from Euler angles.
BoundingBoxD< 1 > BoundingBox1D
Typedef for Python.
Transformation3D get_random_local_transformation(Vector3D origin, double max_translation=5., double max_angle_in_rad=0.26)
Get a local transformation.
Transformation2D get_identity_transformation_2d()
Return a transformation that does not do anything.
std::string get_module_version()
Return the version of this module, as a string.
ConnollySurfacePoints get_connolly_surface(const algebra::Sphere3Ds &spheres, double density, double probe_radius)
Rotation2D get_random_rotation_2d()
Build an identity rotation in 2D.