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IMP Reference Guide  develop.7cb8855c60,2024/10/04
The Integrative Modeling Platform
Chain.h File Reference

Store the chain ID. More...

#include <IMP/atom/atom_config.h>
#include "Hierarchy.h"
#include <IMP/macros.h>
#include <IMP/Decorator.h>
#include <IMP/base_types.h>
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Classes

class  IMP::atom::Chain
 Store info for a chain of a protein. More...
 

Namespaces

 IMP
 Base functionality and abstract base classes for representation, scoring and sampling.
 
 IMP::atom
 Functionality for loading, creating, manipulating and scoring atomic structures.
 

Typedefs

typedef IMP::Vector< Chain > IMP::atom::Chains
 
typedef Key< 90784336 > IMP::atom::ChainType
 
typedef IMP::Vector< ChainType > IMP::atom::ChainTypes
 

Functions

Chain IMP::atom::get_chain (Hierarchy h)
 Get the containing chain or Chain() if there is none. More...
 
std::string IMP::atom::get_chain_id (Hierarchy h)
 Walk up the hierarchy to determine the chain id. More...
 

Variables

const ChainType IMP::atom::DNA
 Shorthand for IMP::atom::Polydeoxyribonucleotide. More...
 
const ChainType IMP::atom::DPolypeptide
 Polypeptide(D) More...
 
const ChainType IMP::atom::DPolysaccharide
 Polysaccharide(D) More...
 
const ChainType IMP::atom::LPolypeptide
 Polypeptide(L) More...
 
const ChainType IMP::atom::LPolysaccharide
 Polysaccharide(L) More...
 
const ChainType IMP::atom::Polydeoxyribonucleotide
 DNA. More...
 
const ChainType IMP::atom::Polyribonucleotide
 RNA. More...
 
const ChainType IMP::atom::Protein
 Shorthand for IMP::atom::LPolypeptide. More...
 
const ChainType IMP::atom::RNA
 Shorthand for IMP::atom::Polyribonucleotide. More...
 
const ChainType IMP::atom::UnknownChainType
 Unknown chain type. More...
 

Detailed Description

Store the chain ID.

Copyright 2007-2022 IMP Inventors. All rights reserved.

Definition in file Chain.h.