Re: [IMP-users] [External] Re: imp_sampcon pyRMSD installation issue

To: Ben Webb <>, "" <>

Subject: Re: [IMP-users] [External] Re: imp_sampcon pyRMSD installation issue

From: "Gorbea, Jose" <>

Date: Wed, 18 Nov 2020 19:50:58 +0000

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Hi Ben,

Thank you very much for the prompt reply. Your suggestion fixed the issue entirely. Thanks!

Best,

Jose

From: Ben Webb <>
Sent: Wednesday, November 18, 2020 1:37 PM
To: Help and discussion for users of IMP <>; Gorbea, Jose <>
Subject: [External] Re: [IMP-users] imp_sampcon pyRMSD installation issue

On 11/18/20 9:17 AM, Gorbea, Jose wrote:
> I am trying to run imp_sampcon exhaust from the actin tutorial and
> pyRMSD is required. I tried pip installation and git cloned the
> repository

Which one? "pip install" certainly won't work because the original
author of pyRMSD gave up years ago and never added support for Python 3:
https://github.com/victor-gil-sepulveda/pyRMSD/issues/12

If you want to git clone, you can use our fork of pyRMSD which *does*
include Python 3 support (https://github.com/salilab/pyRMSD) then build
with "python3 setup.py".

        Ben
--
                      https://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
        - Sir Arthur Conan Doyle