Re: [IMP-users] FW: Installing IMP on Ubuntu

>Does "import IMP.multifit" work from a Python interpreter? It sounds like
some of your environment variables aren't set. Did you use the
setup_environment script?

"import IMP.multifit" does not work. I did use setup_enviroment script. But not all modules could be found.

>And they are...?

Besides multifit, I also noticed that em2d, emagefit, cnmultifit, numpy, could not be found. (Many other modules and applications work well.)

Alan

Nan (Alan) Zhao, Ph.D.
Assistant Research Professor
Department of Basic Sciences
College of Veterinary Medicine
P.O.Box 6100
Mississippi State, MS 39762
Phone: 662-325-1208
Email: " target="_blank">

On Fri, Nov 15, 2013 at 3:23 PM, Nan (Alan) Zhao <" target="_blank">> wrote:

-----Original Message-----
From: "> [mailto:">]
On Behalf Of Ben Webb
Sent: Friday, November 15, 2013 10:14 AM
To: Help and discussion for users of IMP
Subject: Re: [IMP-users] Installing IMP on Ubuntu

On 11/15/13 6:54 AM, Nan Zhao wrote:
> I am new to IMP and tried to install it on a Ubuntu server. It worked
> well mostly and after building, I am able to use basic applications
> and modules. However, I just noticed that not all modules are
> installed. For example, if I run multifit.py, Error shows "No module named
multifit".

Does "import IMP.multifit" work from a Python interpreter? It sounds like
some of your environment variables aren't set. Did you use the
setup_environment script?

> There are more than just this one.

And they are...?

> /usr/local/src/imp_release/doxygen/generated/all.dox:9: warning:
> unable to resolve reference to `impcgal' for \ref command

This is just related to the documentation - nothing to worry about.

BEn
--
"> http://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
- Sir Arthur Conan Doyle
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