At first, the configure stage failed because your latest commit still
contained a symlink.
Which symlink didn't it like?
There were still a few errors with some Windows API functions
complaining about path format.
I don't get any of these - can you give an example?
There was a lot of errors about various symbols present twice in the
same Boost library (program_options).
We link Boost explicitly. But at least on some Windows setups Boost does
autolinking, so you might end up with it trying to link things twice.
Defining BOOST_ALL_NO_LIB should fix that.
There was a great number of warnings about symbols not being
exported. I guess they can be ignored?
I don't get any of those either - can you give an example?
It also replaces a symlink inside scons directory with a Python
package that behaves like a symlink when imported.
That shouldn't be necessary, since that's only used by the scons build,
and you're presumably using cmake here.
Ben
--
http://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
- Sir Arthur Conan Doyle