home
about
news
download
doc
source
systems
tests
bugs
contact
IMP Reference Guide
2.8.0
The Integrative Modeling Platform
IMP Manual
Reference Guide
Modules
Classes
Examples
Class List
Class Index
Class Hierarchy
Class Members
All
Functions
Variables
Enumerations
Related Functions
_
a
b
c
d
e
f
g
h
i
j
k
l
m
n
o
p
q
r
s
t
u
v
w
x
~
Here is a list of all documented class members with links to the class documentation for each member:
- e -
EdgeFloatPropertyMap :
IMP::atom::BondGraph
EdgeIntPropertyMap :
IMP::atom::BondGraph
Em2DRestraint() :
IMP::em2d::Em2DRestraint
EM2DRestraint() :
IMP::spb::EM2DRestraint
empty :
IMP::em::SpiderHeader
enable_all_movers() :
IMP.pmi.dof.DegreesOfFreedom
EnvelopeFitRestraint() :
IMP::em::EnvelopeFitRestraint
EnvelopePenetrationRestraint() :
IMP::em::EnvelopePenetrationRestraint
estimate_cv_constant() :
IMP.isd.TuneRex.CvEstimator
estimate_cv_interpolate() :
IMP.isd.TuneRex.CvEstimator
estimate_cv_mbar() :
IMP.isd.TuneRex.CvEstimator
evaluate() :
IMP::core::ClosedCubicSpline
,
IMP::core::Cosine
,
IMP::core::Harmonic
,
IMP::core::HarmonicLowerBound
,
IMP::core::HarmonicUpperBound
,
IMP::core::HarmonicWell
,
IMP::core::Linear
,
IMP::core::SurfaceTetheredChain
,
IMP::core::TruncatedHarmonic< DIRECTION >
,
IMP::core::WeightedSum
,
IMP::core::WeightedSumOfExponential
,
IMP::em::CoarseCCatIntervals
,
IMP::example::ExampleUnaryFunction
,
IMP::isd::MultivariateFNormalSufficient
,
IMP::isd::OneDimensionalDistribution
,
IMP::isd::OneDimensionalSufficientDistribution
,
IMP::misc::FreelyJointedChain
,
IMP::misc::WormLikeChain
,
IMP.pmi.restraints.RestraintBase
,
IMP::score_functor::ScoreUnaryFunction< Score, D >
,
IMP::ScoringFunction
,
IMP::spb::Gaussian
,
IMP::UnaryFunction
evaluate_derivative_factor() :
IMP::isd::MultivariateFNormalSufficient
evaluate_derivative_FM() :
IMP::isd::FStudentT
,
IMP::isd::MultivariateFNormalSufficient
evaluate_derivative_Fx() :
IMP::isd::FStudentT
evaluate_derivative_FX() :
IMP::isd::FStudentT
evaluate_derivative_LogJX() :
IMP::isd::FStudentT
evaluate_derivative_nu() :
IMP::isd::FStudentT
evaluate_derivative_sigma() :
IMP::isd::FStudentT
evaluate_derivative_Sigma() :
IMP::isd::MultivariateFNormalSufficient
evaluate_for_contributions() :
IMP::isd::AtomicCrossLinkMSRestraint
evaluate_if_good_index() :
IMP::core::ClosePairsPairScore
,
IMP::core::KClosePairsPairScore
,
IMP::PairScore
,
IMP::QuadScore
,
IMP::SingletonScore
,
IMP::TripletScore
evaluate_if_good_indexes() :
IMP::atom::AngleSingletonScore
,
IMP::atom::BondSingletonScore
,
IMP::atom::CoulombPairScore
,
IMP::atom::DihedralSingletonScore
,
IMP::atom::ImproperSingletonScore
,
IMP::atom::LennardJonesPairScore
,
IMP::container::MinimumPairScore
,
IMP::container::MinimumQuadScore
,
IMP::container::MinimumSingletonScore
,
IMP::container::MinimumTripletScore
,
IMP::core::AngleTripletScore
,
IMP::core::ClosePairsPairScore
,
IMP::core::GenericAttributeSingletonScore< UF >
,
IMP::core::GenericBoundingBox3DSingletonScore< UF >
,
IMP::core::GenericDistanceToSingletonScore< UF >
,
IMP::core::HarmonicUpperBoundSphereDiameterPairScore
,
IMP::core::KClosePairsPairScore
,
IMP::core::NormalizedSphereDistancePairScore
,
IMP::core::PredicateSingletonScore< Predicate, Score >
,
IMP::core::RefinedPairsPairScore
,
IMP::core::RigidBodyAnglePairScore
,
IMP::core::SphereDistanceToSingletonScore
,
IMP::core::TransformedDistancePairScore
,
IMP::core::TypedPairScore
,
IMP::core::WeightedSphereDistancePairScore
,
IMP::example::ExamplePairScore
,
IMP::isd::RepulsiveDistancePairScore
,
IMP::misc::LowestRefinedPairScore
,
IMP::misc::SoftCylinderPairScore
,
IMP::PairScore
,
IMP::QuadScore
,
IMP::score_functor::DistancePairScore< DistanceScoreT >
,
IMP::score_functor::SurfaceDistancePairScore< DistanceScoreT >
,
IMP::SingletonScore
,
IMP::spb::AttributeDistancePairScore
,
IMP::spb::KinkPairScore
,
IMP::spb::RigidBodyPackingScore
,
IMP::spb::TiltSingletonScore
,
IMP::TripletScore
evaluate_index() :
IMP::atom::AngleSingletonScore
,
IMP::atom::BondSingletonScore
,
IMP::atom::CoulombPairScore
,
IMP::atom::DihedralSingletonScore
,
IMP::atom::ImproperSingletonScore
,
IMP::atom::LennardJonesPairScore
,
IMP::container::MinimumPairScore
,
IMP::container::MinimumQuadScore
,
IMP::container::MinimumSingletonScore
,
IMP::container::MinimumTripletScore
,
IMP::core::AngleTripletScore
,
IMP::core::ClosePairsPairScore
,
IMP::core::DistancePairScore
,
IMP::core::GenericAttributeSingletonScore< UF >
,
IMP::core::GenericBoundingBox3DSingletonScore< UF >
,
IMP::core::GenericDistanceToSingletonScore< UF >
,
IMP::core::HarmonicDistancePairScore
,
IMP::core::HarmonicSphereDistancePairScore
,
IMP::core::HarmonicSurfaceDepthPairScore
,
IMP::core::HarmonicSurfaceDistancePairScore
,
IMP::core::HarmonicSurfaceHeightPairScore
,
IMP::core::HarmonicUpperBoundSphereDiameterPairScore
,
IMP::core::HarmonicUpperBoundSphereDistancePairScore
,
IMP::core::KClosePairsPairScore
,
IMP::core::NormalizedSphereDistancePairScore
,
IMP::core::PredicateSingletonScore< Predicate, Score >
,
IMP::core::RefinedPairsPairScore
,
IMP::core::RigidBodyAnglePairScore
,
IMP::core::SoftSpherePairScore
,
IMP::core::SoftSubSurfacePairScore
,
IMP::core::SoftSuperSurfacePairScore
,
IMP::core::SphereDistancePairScore
,
IMP::core::SphereDistanceToSingletonScore
,
IMP::core::SurfaceDepthPairScore
,
IMP::core::SurfaceDistancePairScore
,
IMP::core::SurfaceHeightPairScore
,
IMP::core::TransformedDistancePairScore
,
IMP::core::TypedPairScore
,
IMP::core::WeightedSphereDistancePairScore
,
IMP::example::ExamplePairScore
,
IMP::isd::RepulsiveDistancePairScore
,
IMP::misc::LogPairScore
,
IMP::misc::LowestRefinedPairScore
,
IMP::misc::SoftCylinderPairScore
,
IMP::PairScore
,
IMP::QuadScore
,
IMP::score_functor::DistancePairScore< DistanceScoreT >
,
IMP::score_functor::SurfaceDistancePairScore< DistanceScoreT >
,
IMP::SingletonScore
,
IMP::spb::AttributeDistancePairScore
,
IMP::spb::KinkPairScore
,
IMP::spb::RigidBodyPackingScore
,
IMP::spb::TiltSingletonScore
,
IMP::TripletScore
evaluate_indexes() :
IMP::atom::AngleSingletonScore
,
IMP::atom::BondSingletonScore
,
IMP::atom::CoulombPairScore
,
IMP::atom::DihedralSingletonScore
,
IMP::atom::ImproperSingletonScore
,
IMP::atom::LennardJonesPairScore
,
IMP::container::MinimumPairScore
,
IMP::container::MinimumQuadScore
,
IMP::container::MinimumSingletonScore
,
IMP::container::MinimumTripletScore
,
IMP::core::AngleTripletScore
,
IMP::core::ClosePairsPairScore
,
IMP::core::GenericAttributeSingletonScore< UF >
,
IMP::core::GenericBoundingBox3DSingletonScore< UF >
,
IMP::core::GenericDistanceToSingletonScore< UF >
,
IMP::core::HarmonicUpperBoundSphereDiameterPairScore
,
IMP::core::KClosePairsPairScore
,
IMP::core::NormalizedSphereDistancePairScore
,
IMP::core::PredicateSingletonScore< Predicate, Score >
,
IMP::core::RefinedPairsPairScore
,
IMP::core::RigidBodyAnglePairScore
,
IMP::core::SphereDistanceToSingletonScore
,
IMP::core::TransformedDistancePairScore
,
IMP::core::TypedPairScore
,
IMP::core::WeightedSphereDistancePairScore
,
IMP::example::ExamplePairScore
,
IMP::isd::RepulsiveDistancePairScore
,
IMP::misc::LowestRefinedPairScore
,
IMP::misc::SoftCylinderPairScore
,
IMP::PairScore
,
IMP::QuadScore
,
IMP::score_functor::DistancePairScore< DistanceScoreT >
,
IMP::score_functor::SurfaceDistancePairScore< DistanceScoreT >
,
IMP::SingletonScore
,
IMP::spb::AttributeDistancePairScore
,
IMP::spb::KinkPairScore
,
IMP::spb::RigidBodyPackingScore
,
IMP::spb::TiltSingletonScore
,
IMP::TripletScore
evaluate_second_derivative_FM_FM() :
IMP::isd::MultivariateFNormalSufficient
evaluate_second_derivative_FM_Sigma() :
IMP::isd::MultivariateFNormalSufficient
evaluate_second_derivative_Sigma_Sigma() :
IMP::isd::MultivariateFNormalSufficient
evaluate_with_derivative() :
IMP::core::ClosedCubicSpline
,
IMP::core::Cosine
,
IMP::core::Harmonic
,
IMP::core::HarmonicLowerBound
,
IMP::core::HarmonicUpperBound
,
IMP::core::HarmonicWell
,
IMP::core::Linear
,
IMP::core::SurfaceTetheredChain
,
IMP::core::TruncatedHarmonic< DIRECTION >
,
IMP::core::WeightedSum
,
IMP::core::WeightedSumOfExponential
,
IMP::example::ExampleUnaryFunction
,
IMP::misc::FreelyJointedChain
,
IMP::misc::WormLikeChain
,
IMP::score_functor::ScoreUnaryFunction< Score, D >
,
IMP::spb::Gaussian
,
IMP::UnaryFunction
EventException() :
IMP::EventException
ExampleComplexRestraint() :
IMP::example::ExampleComplexRestraint
ExampleRestraint() :
IMP::example::ExampleRestraint
ExampleTemplateClassD() :
IMP::example::ExampleTemplateClassD< D >
ExampleUnaryFunction() :
IMP::example::ExampleUnaryFunction
ExcludedVolumeRestraint() :
IMP::core::ExcludedVolumeRestraint
execute() :
IMP::kmeans::KMeans
execute_macro() :
IMP.pmi.macros.BuildSystem
ExtendedGridIndexD() :
IMP::algebra::ExtendedGridIndexD< D >