IMP.pmi.macros.BuildModel1 Class Reference

Deprecated building macro - use BuildSystem() More...

Inherits object.

Detailed Description

Deprecated building macro - use BuildSystem()

Deprecated:

As of IMP release 2.5.

See the IMP Deprecation Policy for more information about deprecation in IMP. Use BuildSystem instead

Note

This class is only available in Python.

Definition at line 946 of file macros.py.

Public Member Functions
def	__init__
	Constructor. More...
def	build_model
	Create model. More...

Constructor & Destructor Documentation

def IMP.pmi.macros.BuildModel1.__init__	(		self,
			representation
	)

Constructor.

Parameters

representation

The PMI representation

Definition at line 950 of file macros.py.

Member Function Documentation

def IMP.pmi.macros.BuildModel1.build_model	(		self,
			data_structure,
			sequence_connectivity_scale = 4.0,
			sequence_connectivity_resolution = 10,
			rmf_file = None,
			rmf_frame_number = 0,
			rmf_file_map = None,
			skip_connectivity_these_domains = None,
			skip_gaussian_in_rmf = False,
			skip_gaussian_in_representation = False
	)

Create model.

Parameters

data_structure	List of lists containing these entries: comp_name, hier_name, color, fasta_file, fasta_id, pdb_name, chain_id, res_range, read_em_files, bead_size, rb, super_rb, em_num_components, em_txt_file_name, em_mrc_file_name, chain_of_super_rb, keep_gaussian_flexible_beads (optional)
sequence_connectivity_scale
rmf_file
rmf_frame_number
rmf_file_map	: a dictionary that map key=component_name:value=(rmf_file_name, rmf_frame_number, rmf_component_name)

Definition at line 964 of file macros.py.

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The documentation for this class was generated from the following file:

• macros.py