IMP.pmi.restraints.saxs.SAXSISDRestraint Class Reference

Basic SAXS restraint using ISD. More...

Inherits RestraintBase.

Detailed Description

Basic SAXS restraint using ISD.

Note

This class is only available in Python.

Definition at line 110 of file saxs.py.

Public Member Functions
def	draw_gamma
	Draw gamma from lognormal distribution. More...
def	draw_sigma
	Draw 1/sigma2 from gamma distribution. More...
def	get_gamma_value
	Get value of gamma. More...
def	optimize_gamma
	Set gamma to the value that maximizes its conditional likelihood. More...
def	optimize_sigma
	Set sigma to the value that maximizes its conditional likelihood. More...

Member Function Documentation

def IMP.pmi.restraints.saxs.SAXSISDRestraint.draw_gamma

(

self

)

Draw gamma from lognormal distribution.

Definition at line 232 of file saxs.py.

def IMP.pmi.restraints.saxs.SAXSISDRestraint.draw_sigma

(

self

)

Draw 1/sigma2 from gamma distribution.

Definition at line 227 of file saxs.py.

def IMP.pmi.restraints.saxs.SAXSISDRestraint.get_gamma_value

(

self

)

Get value of gamma.

Definition at line 220 of file saxs.py.

def IMP.pmi.restraints.saxs.SAXSISDRestraint.optimize_gamma

(

self

)

Set gamma to the value that maximizes its conditional likelihood.

Definition at line 188 of file saxs.py.

def IMP.pmi.restraints.saxs.SAXSISDRestraint.optimize_sigma

(

self

)

Set sigma to the value that maximizes its conditional likelihood.

Definition at line 181 of file saxs.py.

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The documentation for this class was generated from the following file:

• saxs.py