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IMP Reference Guide
2.22.0
The Integrative Modeling Platform
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A single asymmetric unit in the system. More...
Inherits AsymUnit.
A single asymmetric unit in the system.
This roughly corresponds to a single PMI subunit (sequence, copy, or clone).
This functions identically to the base ihm.AsymUnit class, but it allows identifying residues by either the PMI numbering scheme (which is always contiguous starting at 1, covering the entire sequence in the FASTA files, or the IHM scheme (seq_id, which also starts at 1, but which only covers the modeled subset of the full sequence, with non-modeled N-terminal or C-terminal residues removed).
The entity member of this class points to an Entity object, which contains information (such as database identifiers) specific to a particular sequence rather than a copy (for example, when modeling a homodimer, two AsymUnits will point to the same Entity).
Public Member Functions | |
| def | pmi_range |
| Return a range of IHM residues indexed using PMI numbering. More... | |
| def | pmi_residue |
| Return a single IHM residue indexed using PMI numbering. More... | |
| def IMP.pmi.mmcif.AsymUnit.pmi_range | ( | self, | |
| res_id_begin, | |||
| res_id_end | |||
| ) |
| def IMP.pmi.mmcif.AsymUnit.pmi_residue | ( | self, | |
| res_id | |||
| ) |