Detailed Description

Reader/writer for EM.

Definition at line 20 of file EMReaderWriter.h.

Public Member Functions
virtual std::string	get_type_name () const override

virtual ::IMP::VersionInfo	get_version_info () const override
	Get information about the module and version of the object. More...

void	read (const char filename, float *data, DensityHeader &header) override
	Reads a density file in EM format and stores the information. More...

void	write (const char filename, const float data, const DensityHeader &header) override
	Writes a density file in EM format with the header information. More...

Public Member Functions inherited from IMP::Object
virtual void	clear_caches ()

CheckLevel	get_check_level () const

LogLevel	get_log_level () const

void	set_check_level (CheckLevel l)

void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...

void	set_was_used (bool tf) const

void	show (std::ostream &out=std::cout) const

const std::string &	get_name () const

void	set_name (std::string name)

Protected Member Functions
void	read_data (std::ifstream &file, float **data, const internal::EMHeader &header)
	Reads the data. More...

void	read_header (std::ifstream &file, internal::EMHeader &header)

void	write_header (std::ostream &s, const internal::EMHeader &header)
	Writes the header. More...

Protected Member Functions inherited from IMP::Object
	Object (std::string name)
	Construct an object with the given name. More...

virtual void	do_destroy ()

Member Function Documentation

virtual ::IMP::VersionInfo IMP::em::EMReaderWriter::get_version_info ( ) const

overridevirtual

Get information about the module and version of the object.

Reimplemented from IMP::em::MapReaderWriter.

Definition at line 68 of file EMReaderWriter.h.

void IMP::em::EMReaderWriter::read	(	const char *	filename,
		float **	data,
		DensityHeader &	header
	)

overridevirtual

Reads a density file in EM format and stores the information.

Parameters

[in]	filename	name of the file to read
[in]	data	pointer to the data
[in]	header	DensityHeader() to store the header information

Exceptions

IOException in case that the filename was not found

Reimplemented from IMP::em::MapReaderWriter.

void IMP::em::EMReaderWriter::read_data	(	std::ifstream &	file,
		float **	data,
		const internal::EMHeader &	header
	)

protected

Reads the data.

Parameters

file	ifstream of the file to read
data	pointer to store the data
header	internal::EMHeader to store the header information

Exceptions

IOException	if the data allocation had failed
IOException	is the requested data type is not implemented

void IMP::em::EMReaderWriter::read_header	(	std::ifstream &	file,
		internal::EMHeader &	header
	)

protected

Reads the header Reads the data

Parameters

file	ifstream of the file to read
header	internal::EMHeader to store the header information

void IMP::em::EMReaderWriter::write	(	const char *	filename,
		const float *	data,
		const DensityHeader &	header
	)

overridevirtual

Writes a density file in EM format with the header information.

Parameters

[in]	filename	name of the file to read
[in]	data	pointer to the data
[in]	header	DensityHeader() with the header information

Reimplemented from IMP::em::MapReaderWriter.

void IMP::em::EMReaderWriter::write_header	(	std::ostream &	s,
		const internal::EMHeader &	header
	)

protected

Writes the header.

Parameters

[in]	s
[in]	header	internal::EMHeader with the header information

Exceptions

IOException if the writing operation had failed.

The documentation for this class was generated from the following file:

EMReaderWriter.h

Detailed Description

Public Member Functions

Protected Member Functions

Member Function Documentation