IMP Reference Guide
2.21.0
The Integrative Modeling Platform
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A method for merging SAXS profiles using Gaussian processes. More...
A method for merging SAXS profiles using Gaussian processes.
A method for merging SAXS profiles using Gaussian processes. Small-Angle X-ray Scattering (SAXS) is an experimental technique that allows gathering structural information on biomolecules in solution. High-quality SAXS profiles are usually obtained by manual merging of scattering profiles from different concentrations and exposure times.
SAXS Merge is a fully automated statistical method for merging SAXS profiles using Gaussian processes. This method requires only the buffer-subtracted profile files in a specific order. At the heart of its formulation is nonlinear interpolation using Gaussian Processes, which provide a statement of the problem that accounts for correlation in the data. The method is benchmarked.
A webserver is also available.
Examples:
Author(s): Yannick Spill, Seong Joong Kim, Dina Schneidman-Duhovny
Maintainer: yannickspill
License: LGPL This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
Publications:
Functions | |
def | get_data_path |
Return the full path to one of this module's data files. More... | |
def | get_example_path |
Return the full path to one of this module's example files. More... | |
def | get_module_name |
Return the fully-qualified name of this module. More... | |
def | get_module_version |
Return the version of this module, as a string. More... | |
def IMP.saxs_merge.get_data_path | ( | fname | ) |
Return the full path to one of this module's data files.
Definition at line 15 of file saxs_merge/__init__.py.
def IMP.saxs_merge.get_example_path | ( | fname | ) |
Return the full path to one of this module's example files.
Definition at line 20 of file saxs_merge/__init__.py.
def IMP.saxs_merge.get_module_name | ( | ) |
Return the fully-qualified name of this module.
Definition at line 10 of file saxs_merge/__init__.py.
def IMP.saxs_merge.get_module_version | ( | ) |
Return the version of this module, as a string.
Definition at line 5 of file saxs_merge/__init__.py.