IMP Reference Guide
2.20.2
The Integrative Modeling Platform
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Utility functions to handle alignments. More...
Utility functions to handle alignments.
Functions | |
def | align_centroids_using_pca |
Align the centroids of 2 sets of rigid bodies using PCA using their reference frames. More... | |
def | get_reference_frames_aligning_rbs |
rbs = rigid bodies More... | |
def | get_reference_frames_from_chain_alignment |
Align the rigid bodies rbs_to_align to the reference frames of reference_rbs. More... | |
def IMP.EMageFit.imp_general.alignments.align_centroids_using_pca | ( | ref_frames, | |
ref_frames_reference | |||
) |
Align the centroids of 2 sets of rigid bodies using PCA using their reference frames.
returns the best rmsd and the ref_frames to get it.
Definition at line 40 of file alignments.py.
def IMP.EMageFit.imp_general.alignments.get_reference_frames_aligning_rbs | ( | rbs, | |
reference_rbs | |||
) |
rbs = rigid bodies
Definition at line 68 of file alignments.py.
def IMP.EMageFit.imp_general.alignments.get_reference_frames_from_chain_alignment | ( | reference_rbs, | |
reference_index, | |||
rbs_to_align, | |||
index_to_align | |||
) |
Align the rigid bodies rbs_to_align to the reference frames of reference_rbs.
The rb with index_to_align is aligned to the reference rb with reference_index. The function returns the reference frames to apply to the rbs_to_align.
Definition at line 13 of file alignments.py.