IMP Reference Guide
2.20.2
The Integrative Modeling Platform
|
Map between FASTA codes and residue types. More...
Inherits object.
Map between FASTA codes and residue types.
Typically one would use the amino_acid
, rna
, or dna
objects.
Definition at line 9 of file alphabets.py.
Public Member Functions | |
def | get_chain_type |
Get the IMP.atom.ChainType for this alphabet. More... | |
def | get_one_letter_code_from_residue_type |
Given a residue type, return a one-letter code. More... | |
def | get_residue_type_from_one_letter_code |
Given a one-letter code, return an IMP.atom.ResidueType. More... | |
def IMP.pmi.alphabets.ResidueAlphabet.get_chain_type | ( | self | ) |
Get the IMP.atom.ChainType for this alphabet.
Definition at line 29 of file alphabets.py.
def IMP.pmi.alphabets.ResidueAlphabet.get_one_letter_code_from_residue_type | ( | self, | |
rt | |||
) |
Given a residue type, return a one-letter code.
Definition at line 23 of file alphabets.py.
def IMP.pmi.alphabets.ResidueAlphabet.get_residue_type_from_one_letter_code | ( | self, | |
code | |||
) |
Given a one-letter code, return an IMP.atom.ResidueType.
Definition at line 19 of file alphabets.py.