IMP Reference Guide
2.20.2
The Integrative Modeling Platform
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Storage of anchors (points and edges) More...
#include <IMP/multifit/anchors_reader.h>
Storage of anchors (points and edges)
Definition at line 21 of file anchors_reader.h.
Public Member Functions | |
AnchorsData (algebra::Vector3Ds points, IntPairs edges) | |
bool | get_is_point_considered (int node_ind) const |
int | get_number_of_edges () const |
int | get_number_of_points () const |
bool | get_secondary_structure_is_set () |
Check if secondary structure is setup. More... | |
Particles | get_secondary_structure_particles () const |
void | remove_edges_for_node (int node_ind) |
void | set_secondary_structure_probabilities (const Particles &ssres_ps, const Ints &indices=Ints()) |
Assign secondary structure particles. Provide indices if out of order. More... | |
void | setup_secondary_structure (Model *mdl) |
Sets up default secondary structure particles for every anchor (run first) More... | |
void | show (std::ostream &out=std::cout) const |
Public Attributes | |
std::vector< bool > | consider_point_ |
IntPairs | edges_ |
algebra::Vector3Ds | points_ |
Protected Attributes | |
Particles | secondary_structure_ps_ |
bool IMP::multifit::AnchorsData::get_secondary_structure_is_set | ( | ) |
Check if secondary structure is setup.
Definition at line 63 of file anchors_reader.h.
void IMP::multifit::AnchorsData::set_secondary_structure_probabilities | ( | const Particles & | ssres_ps, |
const Ints & | indices = Ints() |
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Assign secondary structure particles. Provide indices if out of order.
[in] | ssres_ps | The particles which you will be assigning to anchors |
[in] | indices | (Optional) List of which anchor point numbers the provided ssres_ps belong to. |
void IMP::multifit::AnchorsData::setup_secondary_structure | ( | Model * | mdl | ) |
Sets up default secondary structure particles for every anchor (run first)