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IMP Reference Guide
2.20.2
The Integrative Modeling Platform
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Track statistics on a PairContainer. More...
#include <IMP/container/PairContainerStatistics.h>
Inheritance diagram for IMP::container::PairContainerStatistics:Track statistics on a PairContainer.
The current statistics are average and min/max occupancy. Other statistics can be added on request, but we probably want to restrict it to ones that are cheap to gather.
Definition at line 26 of file PairContainerStatistics.h.
Public Member Functions | |
| PairContainerStatistics (PairContainerAdaptor c) | |
| virtual void | do_after_evaluate (DerivativeAccumulator *da) override |
| Do any necessary updates after the model score is calculated. More... | |
| virtual void | do_before_evaluate () override |
| Update the state given the current state of the model. More... | |
| virtual ModelObjectsTemp | do_get_inputs () const override |
| virtual ModelObjectsTemp | do_get_outputs () const override |
| virtual std::string | get_type_name () const override |
| virtual ::IMP::VersionInfo | get_version_info () const override |
| Get information about the module and version of the object. More... | |
| void | set_track_unique (bool tf) |
| void | show_statistics (std::ostream &out) const |
| Public Member Functions inherited from IMP::ScoreState | |
| ScoreState (Model *m, std::string name) | |
| void | after_evaluate (DerivativeAccumulator *accpt) |
| Do post evaluation work if needed. More... | |
| void | before_evaluate () |
| Force update of the structure. More... | |
| bool | get_can_skip () const |
| Get whether this state can be skipped if its inputs/outputs didn't move. More... | |
| Public Member Functions inherited from IMP::ModelObject | |
| ModelObject (Model *m, std::string name) | |
| bool | get_has_dependencies () const |
| Return whether this object has dependencies computed. More... | |
| bool | get_has_required_score_states () const |
| Return whether score states are computed. More... | |
| ModelObjectsTemp | get_inputs () const |
| ModelObjectsTemps | get_interactions () const |
| Get the interacting sets induced by this ModelObject. More... | |
| Model * | get_model () const |
| ModelObjectsTemp | get_outputs () const |
| const ScoreStatesTemp & | get_required_score_states () const |
| Get the score states that are ancestors of this in the dependency graph. More... | |
| void | set_has_dependencies (bool tf) |
| Either invalidate the dependencies or ensure they are correct. More... | |
| void | set_has_required_score_states (bool tf) |
| Compute the required score states. More... | |
| Public Member Functions inherited from IMP::Object | |
| virtual void | clear_caches () |
| CheckLevel | get_check_level () const |
| LogLevel | get_log_level () const |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Additional Inherited Members | |
| Protected Member Functions inherited from IMP::ScoreState | |
| void | set_can_skip (bool can_skip) |
| Set whether we can skip during model evaluation if appropriate. More... | |
| Protected Member Functions inherited from IMP::ModelObject | |
| virtual ModelObjectsTemps | do_get_interactions () const |
| virtual void | handle_set_has_required_score_states (bool) |
| Protected Member Functions inherited from IMP::Object | |
| Object (std::string name) | |
| Construct an object with the given name. More... | |
| virtual void | do_destroy () |
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overridevirtual |
Do any necessary updates after the model score is calculated.
| [in] | accpt | The object used to scale derivatives in the score calculation, or nullptr if derivatives were not requested. |
Implements IMP::ScoreState.
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overridevirtual |
Update the state given the current state of the model.
This is also called prior to every calculation of the model score. It should be implemented by ScoreStates in order to provide functionality.
Implements IMP::ScoreState.
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overridevirtual |
Get any Particle, Container or other ModelObjects read by this during evaluation. If you read everything in a container, you can just return that container.
Implements IMP::ModelObject.
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overridevirtual |
Get any Particle, Container or other ModelObjects changed by this during evaluation. This is only useful for ScoreStates, at the moment.
Implements IMP::ModelObject.
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overridevirtual |
Get information about the module and version of the object.
Reimplemented from IMP::Object.
Definition at line 46 of file PairContainerStatistics.h.
| void IMP::container::PairContainerStatistics::set_track_unique | ( | bool | tf | ) |
Keeping track of the number of unique entries seen is expensive, so it is not done by default.