IMP::atom::PDBSelector Class Reference

Select which atoms to read from a PDB file. More...

#include <IMP/atom/pdb.h>

Inheritance diagram for IMP::atom::PDBSelector:

Detailed Description

Select which atoms to read from a PDB file.

Selector is a general purpose class used to select records from a PDB file. Using descendants of this class one may implement arbitrary selection functions and pass them to PDB reading functions for object selection. Simple selectors can be used to build more complicated ones. Inheritance means "AND" unless otherwise noted (that is, the CAlphaPDBSelector takes all non-alternate C-alphas since it inherits from NonAlternativePDBSelector).

See Also

read_pdb, read_mmcif

Definition at line 103 of file pdb.h.

Public Member Functions
	PDBSelector (std::string name)
virtual bool	get_is_selected (const PDBRecord &record) const =0
	Return true if the line should be processed. More...
Public Member Functions inherited from IMP::Object
virtual void	clear_caches ()
CheckLevel	get_check_level () const
LogLevel	get_log_level () const
virtual VersionInfo	get_version_info () const
	Get information about the module and version of the object. More...
void	set_check_level (CheckLevel l)
void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...
void	set_was_used (bool tf) const
void	show (std::ostream &out=std::cout) const
const std::string &	get_name () const
void	set_name (std::string name)
virtual std::string	get_type_name () const

Additional Inherited Members
Protected Member Functions inherited from IMP::Object
	Object (std::string name)
	Construct an object with the given name. More...
virtual void	do_destroy ()

Member Function Documentation

virtual bool IMP::atom::PDBSelector::get_is_selected ( const PDBRecord &  record ) const

pure virtual

Return true if the line should be processed.

Implemented in IMP::atom::NotPDBSelector, IMP::atom::XorPDBSelector, IMP::atom::OrPDBSelector, IMP::atom::AndPDBSelector, IMP::atom::PPDBSelector, IMP::atom::BackbonePDBSelector, IMP::atom::NonWaterPDBSelector, IMP::atom::NonHydrogenPDBSelector, IMP::atom::NonWaterNonHydrogenPDBSelector, IMP::atom::HydrogenPDBSelector, IMP::atom::WaterPDBSelector, IMP::atom::ChainPDBSelector, IMP::atom::AllPDBSelector, IMP::atom::NPDBSelector, IMP::atom::CPDBSelector, IMP::atom::ResidueTypePDBSelector, IMP::atom::AtomTypePDBSelector, IMP::atom::CBetaPDBSelector, IMP::atom::CAlphaPDBSelector, IMP::atom::ATOMPDBSelector, and IMP::atom::NonAlternativePDBSelector.

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The documentation for this class was generated from the following file:

• pdb.h