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IMP Reference Guide  2.20.0
The Integrative Modeling Platform
IMP::npctransport::LinearInteractionPairScore Member List

This is the complete list of members for IMP::npctransport::LinearInteractionPairScore, including all inherited members.

Argument typedef (defined in IMP::PairScore)IMP::PairScore
clear_caches()IMP::Objectvirtual
create_current_decomposition(Model *m, const ParticleIndexPair &vt) const IMP::PairScore
do_create_current_decomposition(Model *m, const ParticleIndexPair &vt) const IMP::PairScoreprotectedvirtual
do_destroy()IMP::Objectprotectedvirtual
do_get_inputs(Model *m, const ParticleIndexes &pis) const overrideIMP::npctransport::LinearInteractionPairScorevirtual
evaluate_if_good_index(Model *m, const ParticleIndexPairs &p, DerivativeAccumulator *da, double max, unsigned int lower_bound, unsigned int upper_bound) const (defined in IMP::npctransport::LinearInteractionPairScore)IMP::npctransport::LinearInteractionPairScore
IMP::PairScore::evaluate_if_good_index(Model *m, const ParticleIndexPair &vt, DerivativeAccumulator *da, double max) const IMP::PairScorevirtual
evaluate_if_good_indexes(Model *m, const ParticleIndexPairs &o, DerivativeAccumulator *da, double max, unsigned int lower_bound, unsigned int upper_bound) const IMP::PairScorevirtual
evaluate_index(algebra::Sphere3D const &s0, algebra::Sphere3D const &s1, algebra::Sphere3D &ds0, algebra::Sphere3D &ds1, DerivativeAccumulator *da) const IMP::npctransport::LinearInteractionPairScoreprotected
IMP::PairScore::evaluate_index(Model *m, const ParticleIndexPair &vt, DerivativeAccumulator *da) const =0IMP::PairScorepure virtual
evaluate_indexes(Model *m, const ParticleIndexPairs &pips, DerivativeAccumulator *da, unsigned int lower_bound, unsigned int upper_bound) const overrideIMP::npctransport::LinearInteractionPairScorevirtual
evaluate_indexes_delta(Model *m, const ParticleIndexPairs &o, DerivativeAccumulator *da, const std::vector< unsigned > &indexes, std::vector< double > &score) const IMP::PairScorevirtual
evaluate_indexes_scores(Model *m, const ParticleIndexPairs &o, DerivativeAccumulator *da, unsigned int lower_bound, unsigned int upper_bound, std::vector< double > &score) const IMP::PairScorevirtual
get_check_level() const (defined in IMP::Object)IMP::Object
get_evaluation_cache() const (defined in IMP::npctransport::LinearInteractionPairScore)IMP::npctransport::LinearInteractionPairScore
get_inputs(Model *m, const ParticleIndexes &pis) const IMP::ParticleInputs
get_k_attraction() const IMP::npctransport::LinearInteractionPairScore
get_k_repulsion() const IMP::npctransport::LinearInteractionPairScore
get_log_level() const (defined in IMP::Object)IMP::Object
get_name() const (defined in IMP::Object)IMP::Object
get_range_attraction() const IMP::npctransport::LinearInteractionPairScore
get_type_name() const override (defined in IMP::npctransport::LinearInteractionPairScore)IMP::npctransport::LinearInteractionPairScorevirtual
get_version_info() const overrideIMP::npctransport::LinearInteractionPairScorevirtual
IndexArgument typedef (defined in IMP::PairScore)IMP::PairScore
LinearInteractionPairScore(double k_rep, double range_attr, double k_attr, std::string name="LinearIDPairScore%1%")IMP::npctransport::LinearInteractionPairScore
Modifier typedef (defined in IMP::PairScore)IMP::PairScore
NonCopyable() (defined in IMP::NonCopyable)IMP::NonCopyableprotected
Object(std::string name)IMP::Objectprotected
PairScore(std::string name="PairScore %1%") (defined in IMP::PairScore)IMP::PairScore
PassArgument typedef (defined in IMP::PairScore)IMP::PairScore
PassIndexArgument typedef (defined in IMP::PairScore)IMP::PairScore
set_check_level(CheckLevel l)IMP::Object
set_k_attraction(double k_attr)IMP::npctransport::LinearInteractionPairScore
set_k_repulsion(double k_rep)IMP::npctransport::LinearInteractionPairScore
set_log_level(LogLevel l)IMP::Object
set_name(std::string name) (defined in IMP::Object)IMP::Object
set_was_used(bool tf) const IMP::Object
show(std::ostream &out=std::cout) const (defined in IMP::Object)IMP::Object
~LinearInteractionPairScore() (defined in IMP::npctransport::LinearInteractionPairScore)IMP::npctransport::LinearInteractionPairScorevirtual
~Object() (defined in IMP::Object)IMP::Objectvirtual
~ParticleInputs() (defined in IMP::ParticleInputs)IMP::ParticleInputsprotectedvirtual