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IMP Reference Guide
2.16.0
The Integrative Modeling Platform
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Represent a metric for clustering data that has already been clustered once. More...
#include <IMP/statistics/RecursivePartitionalClusteringMetric.h>
Inheritance diagram for IMP::statistics::RecursivePartitionalClusteringMetric:Represent a metric for clustering data that has already been clustered once.
To use it, cluster things once, then create one of these with the metric you want (created with the original data). When you pass this metric to the clustering algorithm, it will cluster the centers. You can extract the clustering of the original elements using create_full_clustering().
Definition at line 25 of file RecursivePartitionalClusteringMetric.h.
Public Member Functions | |
| RecursivePartitionalClusteringMetric (Metric *metric, PartitionalClustering *clustering) | |
| PartitionalClustering * | create_full_clustering (PartitionalClustering *center_cluster) |
| double | get_distance (unsigned int i, unsigned int j) const |
| unsigned int | get_number_of_items () const |
| virtual std::string | get_type_name () const |
| virtual ::IMP::VersionInfo | get_version_info () const |
| Get information about the module and version of the object. More... | |
| Public Member Functions inherited from IMP::statistics::Metric | |
| double | get_weight (unsigned int i) const |
| Return a weight for the point. More... | |
| Public Member Functions inherited from IMP::Object | |
| virtual void | clear_caches () |
| CheckLevel | get_check_level () const |
| LogLevel | get_log_level () const |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Additional Inherited Members | |
| Protected Member Functions inherited from IMP::statistics::Metric | |
| Metric (std::string name) | |
| virtual double | do_get_weight (unsigned int i) const |
| By default return 1.0. More... | |
| Protected Member Functions inherited from IMP::Object | |
| Object (std::string name) | |
| Construct an object with the given name. More... | |
| virtual void | do_destroy () |
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virtual |
Get information about the module and version of the object.
Reimplemented from IMP::Object.
Definition at line 36 of file RecursivePartitionalClusteringMetric.h.