IMP Reference Guide
2.14.0
The Integrative Modeling Platform
|
Restraints for handling various kinds of proteomics data. More...
Restraints for handling various kinds of proteomics data.
Classes | |
class | AmbiguousCompositeRestraint |
this restraint allows ambiguous cross-linking between multiple copies excluding between symmetric copies It allows name ambiguity More... | |
class | CompositeRestraint |
handleparticles a list of particles compositeparticles is a list of list of particles More... | |
class | ConnectivityNetworkRestraint |
a python restraint that computes the score for a composite of proteins Authors: G. More... | |
class | ConnectivityRestraint |
generate a connectivity restraint between domains setting up the restraint example: sel1 = IMP.atom.Selection(root_hier, molecule="Rpb3", residue_indexes=range(1,100)) sel2 = IMP.atom.Selection(root_hier, molecule="Rpb4", residue_indexes=range(1,100)) cr=restraints.ConnectivityRestraint((sel1, sel2), label='CR1') cr.add_to_model() Multistate support =No Resolution=Yes More... | |
class | FuzzyBoolean |
Fully Ambiguous Restraint that can be built using boolean logic R. More... | |
class | FuzzyRestraint |
Fully Ambiguous Restraint that can be built using boolean logic R. More... | |
class | SetupConnectivityNetworkRestraint |
generates and wraps a IMP.pmi.ConnectivityRestraint between domains example: cr=restraints.ConnectivityNetworkRestraint(simo,["CCC",(1,100,"TTT"),(100,150,"AAA")]) cr.add_to_model() cr.set_label("CR1") More... | |