IMP Reference Guide
2.14.0
The Integrative Modeling Platform
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Basic SAXS restraint using ISD. More...
Inherits RestraintBase.
Basic SAXS restraint using ISD.
Definition at line 101 of file restraints/saxs.py.
Public Member Functions | |
def | draw_gamma |
Draw gamma from lognormal distribution. More... | |
def | draw_sigma |
Draw 1/sigma2 from gamma distribution. More... | |
def | get_gamma_value |
Get value of gamma. More... | |
def | optimize_gamma |
Set gamma to the value that maximizes its conditional likelihood. More... | |
def | optimize_sigma |
Set sigma to the value that maximizes its conditional likelihood. More... | |
def IMP.pmi.restraints.saxs.SAXSISDRestraint.draw_gamma | ( | self | ) |
Draw gamma from lognormal distribution.
Definition at line 224 of file restraints/saxs.py.
def IMP.pmi.restraints.saxs.SAXSISDRestraint.draw_sigma | ( | self | ) |
Draw 1/sigma2 from gamma distribution.
Definition at line 219 of file restraints/saxs.py.
def IMP.pmi.restraints.saxs.SAXSISDRestraint.get_gamma_value | ( | self | ) |
Get value of gamma.
Definition at line 212 of file restraints/saxs.py.
def IMP.pmi.restraints.saxs.SAXSISDRestraint.optimize_gamma | ( | self | ) |
Set gamma to the value that maximizes its conditional likelihood.
Definition at line 180 of file restraints/saxs.py.
def IMP.pmi.restraints.saxs.SAXSISDRestraint.optimize_sigma | ( | self | ) |
Set sigma to the value that maximizes its conditional likelihood.
Definition at line 173 of file restraints/saxs.py.