IMP Reference Guide
2.14.0
The Integrative Modeling Platform
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A simple distance restraint. More...
A simple distance restraint.
Definition at line 76 of file /restraints/basic.py.
Public Member Functions | |
def | __init__ |
Setup distance restraint. More... | |
Public Member Functions inherited from IMP.pmi1.restraints.RestraintBase | |
def | __init__ |
Constructor. More... | |
def | add_to_model |
Add the restraint to the model. More... | |
def | evaluate |
Evaluate the score of the restraint. More... | |
def | get_output |
Get outputs to write to stat files. More... | |
def | get_particles_to_sample |
Get any created particles which should be sampled. More... | |
def | get_restraint |
Get the primary restraint set. More... | |
def | get_restraint_for_rmf |
Get the restraint for visualization in an RMF file. More... | |
def | get_restraint_set |
Get the primary restraint set. More... | |
def | set_label |
Set the unique label used in outputs and particle/restraint names. More... | |
def | set_weight |
Set the weight to apply to all internal restraints. More... | |
def IMP.pmi1.restraints.basic.DistanceRestraint.__init__ | ( | self, | |
representation = None , |
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tuple_selection1 = None , |
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tuple_selection2 = None , |
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distancemin = 0 , |
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distancemax = 100 , |
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resolution = 1.0 , |
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kappa = 1.0 , |
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root_hier = None , |
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label = None , |
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weight = 1.0 |
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) |
Setup distance restraint.
representation | DEPRECATED |
tuple_selection1 | (resnum, resnum, molecule name, copy number (=0)) |
tuple_selection2 | (resnum, resnum, molecule name, copy number (=0)) |
distancemin | The minimum dist |
distancemax | The maximum dist |
resolution | For selecting particles |
kappa | The harmonic parameter |
root_hier | The hierarchy to select from (use this instead of representation) |
label | A unique label to be used in outputs and particle/restraint names |
weight | Weight of restraint |
ote Pass the same resnum twice to each tuple_selection. Optionally add a copy number (PMI2 only)
Definition at line 96 of file /restraints/basic.py.