IMP Reference Guide
2.14.0
The Integrative Modeling Platform
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A decorator for helping deal with a generalized hierarchy. More...
#include <IMP/core/Hierarchy.h>
A decorator for helping deal with a generalized hierarchy.
See HierarchyTraits for an example of how to define a custom hierarchy and IMP::atom::Hierarchy for a hierarchy for molecules.
Definition at line 78 of file core/Hierarchy.h.
Public Types | |
typedef HierarchyTraits | DecoratorTraits |
Public Member Functions | |
Hierarchy (const IMP::ParticleAdaptor &d, const HierarchyTraits &tr=get_default_traits()) | |
Hierarchy (::IMP::Model *m,::IMP::ParticleIndex id, const HierarchyTraits &tr=get_default_traits()) | |
void | add_child (Hierarchy h) const |
void | add_child_at (Hierarchy h, unsigned int pos) |
void | clear_children () |
Hierarchy | get_child (unsigned int i) const |
ParticleIndex | get_child_index (unsigned int i) const |
int | get_child_index () const |
Return i such that get_parent().get_child(i) == this More... | |
GenericHierarchies | get_children () const |
ParticleIndexes | get_children_indexes () const |
const DecoratorTraits & | get_decorator_traits () const |
unsigned int | get_number_of_children () const |
Hierarchy | get_parent () const |
HierarchyTraits | get_traits () |
void | remove_child (unsigned int i) |
void | remove_child (Hierarchy h) |
void | show (std::ostream &out=std::cout) const |
Public Member Functions inherited from IMP::Decorator | |
bool | get_is_valid () const |
Returns true if constructed with a non-default constructor. More... | |
Model * | get_model () const |
Returns the Model containing the particle. More... | |
Particle * | get_particle () const |
Returns the particle decorated by this decorator. More... | |
ParticleIndex | get_particle_index () const |
Returns the particle index decorated by this decorator. More... | |
operator Particle * () const | |
operator ParticleIndex () const | |
Particle * | operator-> () const |
Static Public Member Functions | |
static const DecoratorTraits & | get_default_decorator_traits () |
static const HierarchyTraits & | get_default_traits () |
Get the default hierarchy traits. More... | |
static bool | get_is_setup (const IMP::ParticleAdaptor &p, const HierarchyTraits &tr=get_default_traits()) |
static bool | get_is_setup (Model *, ParticleIndex, HierarchyTraits=Hierarchy::get_default_traits()) |
static Hierarchy | setup_particle (IMP::ParticleAdaptor d, DecoratorTraits tr=get_default_decorator_traits()) |
static Hierarchy | setup_particle (Model *m, ParticleIndex pi, DecoratorTraits tr=get_default_decorator_traits()) |
static Hierarchy | setup_particle (Model *m, ParticleIndex pi, ParticleIndexes children, DecoratorTraits tr=get_default_decorator_traits()) |
static Hierarchy | setup_particle (IMP::ParticleAdaptor d, ParticleIndexes children, DecoratorTraits tr=get_default_decorator_traits()) |
static Hierarchy | setup_particle (IMP::ParticleAdaptor d, ParticlesTemp children, DecoratorTraits tr=get_default_decorator_traits()) |
static Hierarchy | setup_particle (Model *m, ParticleIndex pi, ParticlesTemp children, DecoratorTraits tr=get_default_decorator_traits()) |
Additional Inherited Members | |
Protected Member Functions inherited from IMP::Decorator | |
Decorator (Model *m, ParticleIndex pi) | |
Decorator (ParticleAdaptor p) | |
int IMP::core::Hierarchy::get_child_index | ( | ) | const |
Return i such that get_parent().get_child(i) == this
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Get the default hierarchy traits.
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Check if the particle has the needed attributes for a cast to succeed
Definition at line 105 of file core/Hierarchy.h.
Hierarchy IMP::core::Hierarchy::get_parent | ( | ) | const |
Definition at line 112 of file core/Hierarchy.h.
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Setup the particle so it can be used with this decorator.
Definition at line 98 of file core/Hierarchy.h.
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Setup the particle and add children.
Definition at line 100 of file core/Hierarchy.h.