IMP Reference Guide
2.14.0
The Integrative Modeling Platform
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The refiner can refine any particle by returning a fixed set. More...
#include <IMP/core/FixedRefiner.h>
The refiner can refine any particle by returning a fixed set.
Definition at line 22 of file FixedRefiner.h.
Public Member Functions | |
FixedRefiner (const ParticlesTemp &ps) | |
Store the set of particles. More... | |
FixedRefiner (Model *m, const ParticleIndexes &pis) | |
Store the set of particle indexes from passed model. More... | |
virtual ModelObjectsTemp | do_get_inputs (Model *m, const ParticleIndexes &pis) const |
Overload this method to specify the inputs. More... | |
virtual bool | get_can_refine (Particle *) const |
Return true if this refiner can refine that particle. More... | |
virtual const ParticlesTemp | get_refined (Particle *p) const |
Returns the fixed set of particles. More... | |
virtual ParticleIndexes | get_refined_indexes (Model *m, ParticleIndex) const |
Returns the fixed set of particles, as indexes. More... | |
virtual ParticleIndexes const & | get_refined_indexes_by_ref (Model *m, ParticleIndex pi) const |
Return the indexes of the particles returned by get_refined() More... | |
virtual std::string | get_type_name () const |
virtual ::IMP::VersionInfo | get_version_info () const |
Get information about the module and version of the object. More... | |
Public Member Functions inherited from IMP::Refiner | |
Refiner (std::string name="Refiner %1%", bool is_by_ref=false) | |
bool | get_is_by_ref_supported () |
virtual unsigned int | get_number_of_refined (Particle *a) const |
virtual Particle * | get_refined (Particle *a, unsigned int i) const |
Get the ith refined particle. More... | |
RefinedIterator | refined_begin (Particle *a) const |
RefinedIterator | refined_end (Particle *a) const |
Public Member Functions inherited from IMP::ParticleInputs | |
ModelObjectsTemp | get_inputs (Model *m, const ParticleIndexes &pis) const |
Get the ModelObjects read when the given list of particles is used. More... | |
Public Member Functions inherited from IMP::Object | |
virtual void | clear_caches () |
CheckLevel | get_check_level () const |
LogLevel | get_log_level () const |
void | set_check_level (CheckLevel l) |
void | set_log_level (LogLevel l) |
Set the logging level used in this object. More... | |
void | set_was_used (bool tf) const |
void | show (std::ostream &out=std::cout) const |
const std::string & | get_name () const |
void | set_name (std::string name) |
Additional Inherited Members | |
Public Types inherited from IMP::Refiner | |
typedef internal::IndexingIterator < Accessor > | RefinedIterator |
Protected Member Functions inherited from IMP::Object | |
Object (std::string name) | |
Construct an object with the given name. More... | |
virtual void | do_destroy () |
IMP::core::FixedRefiner::FixedRefiner | ( | const ParticlesTemp & | ps | ) |
Store the set of particles.
IMP::core::FixedRefiner::FixedRefiner | ( | Model * | m, |
const ParticleIndexes & | pis | ||
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Store the set of particle indexes from passed model.
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Overload this method to specify the inputs.
Implements IMP::ParticleInputs.
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Return true if this refiner can refine that particle.
This should not throw, so be careful what fields are touched.
Reimplemented from IMP::Refiner.
Definition at line 33 of file FixedRefiner.h.
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Returns the fixed set of particles, as indexes.
Reimplemented from IMP::Refiner.
Definition at line 52 of file FixedRefiner.h.
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Return the indexes of the particles returned by get_refined()
Return the indexes of the particles returned by get_refined() for particle pi in model m by reference (possibly faster).
m,pi | model and particle index of coarse particle to be refined |
Reimplemented from IMP::Refiner.
Definition at line 61 of file FixedRefiner.h.
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Get information about the module and version of the object.
Reimplemented from IMP::Object.
Definition at line 76 of file FixedRefiner.h.