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IMP Reference Guide  2.13.0
The Integrative Modeling Platform
IMP.pmi.alphabets.ResidueAlphabet Class Reference

Map between FASTA codes and residue types. More...

Inherits object.

Detailed Description

Map between FASTA codes and residue types.

Typically one would use the amino_acid, rna, or dna objects.

Note
This class is only available in Python.

Definition at line 9 of file alphabets.py.

Public Member Functions

def get_one_letter_code_from_residue_type
 Given a residue type, return a one-letter code. More...
 
def get_residue_type_from_one_letter_code
 Given a one-letter code, return an IMP.atom.ResidueType. More...
 

Member Function Documentation

def IMP.pmi.alphabets.ResidueAlphabet.get_one_letter_code_from_residue_type (   self,
  rt 
)

Given a residue type, return a one-letter code.

Definition at line 22 of file alphabets.py.

def IMP.pmi.alphabets.ResidueAlphabet.get_residue_type_from_one_letter_code (   self,
  code 
)

Given a one-letter code, return an IMP.atom.ResidueType.

Definition at line 18 of file alphabets.py.


The documentation for this class was generated from the following file: