IMP::npctransport::ParticleFactory Class Reference

Factory that produces diffusing particles with specified attributes. More...

#include <IMP/npctransport/ParticleFactory.h>

Inheritance diagram for IMP::npctransport::ParticleFactory:

Detailed Description

Factory that produces diffusing particles with specified attributes.

Definition at line 23 of file ParticleFactory.h.

Public Member Functions
	ParticleFactory (SimulationData *sd, double radius, double D_factor, double angular_D_factor, display::Color color, core::ParticleType type, std::string name="Particle factory %1%")
IMP::Particle *	create (std::string name="")
Model *	get_model ()
	return model associated with this factory More...
double	get_radius () const
	return radius of generated particles More...
SimulationData *	get_simulation_data ()
	return SimulationData object associated with this factory More...
virtual std::string	get_type_name () const
virtual ::IMP::VersionInfo	get_version_info () const
	Get information about the module and version of the object. More...
Public Member Functions inherited from IMP::Object
virtual void	clear_caches ()
CheckLevel	get_check_level () const
LogLevel	get_log_level () const
void	set_check_level (CheckLevel l)
void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...
void	set_was_used (bool tf) const
void	show (std::ostream &out=std::cout) const
const std::string &	get_name () const
void	set_name (std::string name)

Public Attributes
double	angular_D_factor_
display::Color	color_
double	D_factor_
double	radius_
IMP::WeakPointer< SimulationData >	sd_
core::ParticleType	type_

Additional Inherited Members
Protected Member Functions inherited from IMP::Object
	Object (std::string name)
	Construct an object with the given name. More...
virtual void	do_destroy ()

Constructor & Destructor Documentation

IMP::npctransport::ParticleFactory::ParticleFactory	(	SimulationData *	sd,
		double	radius,
		double	D_factor,
		double	angular_D_factor,
		display::Color	color,
		core::ParticleType	type,
		std::string	name = "Particle factory %1%"
	)

construct a factory that produces diffusing particles with specified attributes, with a default mass of 1.0

Parameters

sd	the simulation data whose model is associated with new particles particles are decorated with a simulation data attribute to mark their owner
radius	particle radius (A)
D_factor	diffusion factor (relative to that auto-calculated from radius). If 0.0, no diffusion or angular diffusion is set up.
angular_D_factor	angular diffusion factor (relative to that auto-calculated from radius times D_factor). If non-positive, do not setup angular rigid body diffusion (still set up Diffusion if D_factor>0.0)
color	color for new particles
type	the type of new particles
name	object name

Definition at line 64 of file ParticleFactory.h.

Member Function Documentation

IMP::Particle* IMP::npctransport::ParticleFactory::create

(

std::string

name = ""

)

create a particle as specified during construction. The particle is decorated with XYZR, RigidBodyDiffusion, Color and Typed decorator. In addition, a simulation data key is added to it pointing to this->sd_

Parameters

name	- name of particle. If empty, the return value of this->type_.get_string() is used

Model* IMP::npctransport::ParticleFactory::get_model

(

)

return model associated with this factory

Definition at line 93 of file ParticleFactory.h.

double IMP::npctransport::ParticleFactory::get_radius

(

)

const

return radius of generated particles

Definition at line 103 of file ParticleFactory.h.

SimulationData* IMP::npctransport::ParticleFactory::get_simulation_data

(

)

return SimulationData object associated with this factory

Definition at line 98 of file ParticleFactory.h.

virtual ::IMP::VersionInfo IMP::npctransport::ParticleFactory::get_version_info ( ) const

virtual

Get information about the module and version of the object.

Reimplemented from IMP::Object.

Definition at line 106 of file ParticleFactory.h.

Member Data Documentation

double IMP::npctransport::ParticleFactory::angular_D_factor_

angular diffusion factor

Definition at line 36 of file ParticleFactory.h.

display::Color IMP::npctransport::ParticleFactory::color_

particle color

Definition at line 39 of file ParticleFactory.h.

double IMP::npctransport::ParticleFactory::D_factor_

diffusion factor

Definition at line 33 of file ParticleFactory.h.

double IMP::npctransport::ParticleFactory::radius_

particle radius (A)

Definition at line 30 of file ParticleFactory.h.

IMP::WeakPointer<SimulationData> IMP::npctransport::ParticleFactory::sd_

The simulation data whose model is associated with new particle

Definition at line 27 of file ParticleFactory.h.

core::ParticleType IMP::npctransport::ParticleFactory::type_

particle type

Definition at line 42 of file ParticleFactory.h.

---

The documentation for this class was generated from the following file:

• ParticleFactory.h