vonMisesKappaJeffreysRestraint.h

Go to the documentation of this file.

/**
 *  \file IMP/isd/vonMisesKappaJeffreysRestraint.h
 *  \brief Jeffreys prior for \f$\kappa\f$ in the von Mises distribution.
 *
 *  Copyright 2007-2019 IMP Inventors. All rights reserved.
 *
 */

#ifndef IMPISD_VON_MISES_KAPPA_JEFFREYS_RESTRAINT_H
#define IMPISD_VON_MISES_KAPPA_JEFFREYS_RESTRAINT_H

#include <IMP/isd/isd_config.h>
#include <IMP/SingletonScore.h>
#include <IMP/Restraint.h>

IMPISD_BEGIN_NAMESPACE

//! Jeffreys prior for the \f$\kappa\f$ concentration parameter of a von Mises distribution.
/** \f[p(\kappa) = \sqrt{\frac{I_1(\kappa)}{I_0(\kappa)}
 *  \left[
 *    \kappa
 *    -\frac{I_1(\kappa)}{I_0(\kappa)}
 *    -\kappa\left(\frac{I_1(\kappa)}{I_0(\kappa)}\right)^2
 *  \right]}\f]
*/

class IMPISDEXPORT vonMisesKappaJeffreysRestraint : public Restraint {
  Pointer<Particle> kappa_;
  double old_kappaval;
  double I0_, I1_;

 public:
  //! Create the restraint.
  vonMisesKappaJeffreysRestraint(Model *m, Particle *kappa);

  virtual double unprotected_evaluate(IMP::DerivativeAccumulator *accum)
      const IMP_OVERRIDE;
  virtual IMP::ModelObjectsTemp do_get_inputs() const IMP_OVERRIDE;
  IMP_OBJECT_METHODS(vonMisesKappaJeffreysRestraint);

  virtual double get_probability() const;

 private:
  void update_bessel(double kappaval);  // update memoized bessel values
};

IMPISD_END_NAMESPACE

#endif /* IMPISD_VON_MISES_KAPPA_JEFFREYS_RESTRAINT_H */