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IMP Reference Guide  2.11.1
The Integrative Modeling Platform
IMP.pmi.topology.PDBSequences Class Reference

Data_structure for reading and storing sequence data from pdb. More...

Inherits object.

Detailed Description

Data_structure for reading and storing sequence data from pdb.

Note
This class is only available in Python.

Definition at line 899 of file pmi/topology/__init__.py.

Public Member Functions

def __init__
 read a pdb file and returns all sequences for each contiguous fragment More...
 

Constructor & Destructor Documentation

def IMP.pmi.topology.PDBSequences.__init__ (   self,
  model,
  pdb_fn,
  name_map = None 
)

read a pdb file and returns all sequences for each contiguous fragment

Parameters
pdb_fnfile
name_mapdictionary mapping the pdb chain id to final stored name

Definition at line 903 of file pmi/topology/__init__.py.


The documentation for this class was generated from the following file: