IMP
2.0.0
The Integrative Modeling Platform
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Class to handle individual model particles. More...
#include <IMP/kernel/declare_Particle.h>
Public Member Functions | |
Particle (Model *m, std::string name) | |
Construct a particle and add it to the Model. | |
Particle (Model *m) | |
Construct a particle and add it to the Model. | |
virtual void | do_show (std::ostream &out) const |
ParticleIndex | get_index () const |
Public Member Functions inherited from IMP::kernel::ModelObject | |
ModelObject (Model *m, std::string name) | |
ModelObjectsTemp | get_inputs () const |
ModelObjectsTemps | get_interactions () const |
Model * | get_model () const |
ModelObjectsTemp | get_outputs () const |
Public Member Functions inherited from IMP::base::Object | |
virtual void | clear_caches () |
virtual IMP::base::VersionInfo | get_version_info () const =0 |
Get information about the module and version of the object. | |
void | set_check_level (CheckLevel l) |
void | set_log_level (LogLevel l) |
Set the logging level used in this object. More... | |
void | set_was_used (bool tf) const |
void | show (std::ostream &out=std::cout) const |
const std::string & | get_name () const |
void | set_name (std::string name) |
Protected Member Functions | |
virtual ModelObjectsTemp | do_get_inputs () const |
virtual ModelObjectsTemp | do_get_outputs () const |
virtual void | do_update_dependencies () |
Protected Member Functions inherited from IMP::kernel::ModelObject | |
virtual ModelObjectsTemps | do_get_interactions () const |
virtual void | update_dependencies () |
Protected Member Functions inherited from IMP::base::Object | |
Object (std::string name) | |
Construct an object with the given name. More... | |
Additional Inherited Members | |
Related Functions inherited from IMP::kernel::ModelObject | |
typedef IMP::base::Vector < IMP::base::WeakPointer < ModelObject > > | ModelObjectsTemp |
At this point a Particle should only be considered as a placeholder for the ParticleIndex, accessed through the get_index() method.
Definition at line 79 of file kernel/declare_Particle.h.
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protectedvirtual |
Override if this reads other objects during evaluate.
Implements IMP::kernel::ModelObject.
Definition at line 159 of file kernel/declare_Particle.h.
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protectedvirtual |
Override if this writes other objects during evaluate.
Implements IMP::kernel::ModelObject.
Definition at line 162 of file kernel/declare_Particle.h.
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protectedvirtual |
This method is called when the dependencies in the model have changed and model evaluate is called (or Model::ensure_dependencies()). The object can use this to update anything that is needed for efficient computation.
Reimplemented from IMP::kernel::ModelObject.
Definition at line 165 of file kernel/declare_Particle.h.