IMP::em::SpiderMapReaderWriter Class Reference

Detailed Description

Class to read EM maps (3D) in Spider and Xmipp formats.

Note:: : Compatible only with Xmipp 2.2 and Spider floating point maps
: A DensityHeader class must be provided

Inherits IMP::em::MapReaderWriter.


Public Member Functions
void	Read (const char filename, float *data, DensityHeader &header)
	Reads a map in Spider format and transfers the data and header.
	SpiderMapReaderWriter (String filename, bool skip_type_check, bool force_reversed, bool skip_extra_checkings)
	Full constructor.
	SpiderMapReaderWriter ()
void	Write (const char filename, const float data, const DensityHeader &header)
	Writes a map in Spider format from data and header.
Data Fields
String	filename_
bool	force_reversed_
bool	skip_extra_checkings_
bool	skip_type_check_

IMP::em::SpiderMapReaderWriter::SpiderMapReaderWriter ( )

Empty constructor. It does not force reversed header and does not skip any of the tests

IMP::em::SpiderMapReaderWriter::SpiderMapReaderWriter	(	String	filename,
		bool	skip_type_check,
		bool	force_reversed,
		bool	skip_extra_checkings
	)

Full constructor.

Parameters:

`[in]`	filename	file to read
`[in]`	skip_type_check	if true, the check for type of image is skipped
`[in]`	force_reversed	if true, the reverse mode is enforced for reading and writting
`[in]`	skip_extra_checkings	if true, the most stringent tests for consistency of images are skipped when reading

void IMP::em::SpiderMapReaderWriter::Read	(	const char *	filename,
		float **	data,
		DensityHeader &	header
	)

Reads a map in Spider format and transfers the data and header.

Parameters:

`[in]`	filename	file to read
`[in]`	data	pointer to the structure where to store the data
`[in]`	header	DensityHeader class where to store the info from the header.

void IMP::em::SpiderMapReaderWriter::Write	(	const char *	filename,
		const float *	data,
		const DensityHeader &	header
	)

Writes a map in Spider format from data and header.

Parameters:

`[in]`	filename	file to write
`[in]`	data	pointer to the structure where data are stored
`[in]`	header	DensityHeader class where the header info is stored data from the header.

The documentation for this class was generated from the following files: