IMP systems

Modeling of the phosphodiesterase (PDE6) [more...]

This system (using these input files) was tested but does not work with:

MODELLER version 9.12
IMP develop branch (2013-06-01), revision ff45220f01 (built with all checks turned on)

Detailed test information

test.py FAILED with code 1 (took 14 minutes) and stderr:

.Traceback (most recent call last):
  File "./run_modeling.py", line 749, in <module>
    rc.setup_and_run(test)
  File "./run_modeling.py", line 587, in setup_and_run
    self.rigidbody_list.append(self.create_rigid_body(rigid_body_definition_ref,self.prot[0]))
  File "./run_modeling.py", line 31, in create_rigid_body
    s=IMP.atom.Selection(prot,chains=interval[2],residue_indexes=rinterval)
  File "/salilab/diva1/home/imp/develop/20130601-ff45220/lib/x86_64-intel8/IMP/atom/__init__.py", line 7573, in __init__
    eval("self.set_%s(params[k])"%k)
  File "<string>", line 1, in <module>
  File "/salilab/diva1/home/imp/develop/20130601-ff45220/lib/x86_64-intel8/IMP/atom/__init__.py", line 7480, in set_residue_indexes
    return _IMP_atom.Selection_set_residue_indexes(self, *args)
TypeError: Argument not of correct type

E.
======================================================================
ERROR: Test the integrative modeling script
----------------------------------------------------------------------
Traceback (most recent call last):
  File "./test.py", line 20, in test_integrative_modeling
    cwd='integrative_modeling')
  File "/usr/lib64/python2.6/subprocess.py", line 502, in check_call
    raise CalledProcessError(retcode, cmd)
CalledProcessError: Command '['./run_modeling.py', 'test']' returned non-zero exit status 1

----------------------------------------------------------------------
Ran 3 tests in 879.907s

FAILED (errors=1)

Build information