[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

Re: [IMP-users] Normal Mode Analysis

To: Help and discussion for users of IMP <>, Altair Hernández <>
Subject: Re: [IMP-users] Normal Mode Analysis
From: Ben Webb <>
Date: Fri, 11 Jun 2021 11:02:58 -0700

On 6/8/21 9:26 AM, Altair Hernández wrote:

I would like to analyse themobility of each subunit by using normal modes (normal mode analysis) ofeach subunit. Is there any function/method in IMP to do this?

To the best of my knowledge, there is no code in IMP to perform normalmode analysis. You may want to check out the rapidly exploring randomtree (RRT) method though:https://integrativemodeling.org/nightly/doc/manual/kinematics_rrt.html


	Ben
--
                      https://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
	- Sir Arthur Conan Doyle

References:
- [IMP-users] Normal Mode Analysis
  - From: Altair Hernández <>

Prev by Date: [IMP-users] Normal Mode Analysis
Next by Date: [IMP-users] extracting distance from CrossLinkingMassSpectrometryRestraint with state ambiguity
Previous by thread: [IMP-users] Normal Mode Analysis
Next by thread: [IMP-users] extracting distance from CrossLinkingMassSpectrometryRestraint with state ambiguity
Index(es):
- Date
- Thread