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Re: [IMP-users] How to represent a protein-protein interaction network in IMP

To: Help and discussion for users of IMP <>
Subject: Re: [IMP-users] How to represent a protein-protein interaction network in IMP
From: Daniel Russel <>
Date: Fri, 1 Nov 2013 10:18:43 -0700
Reply-to: Help and discussion for users of IMP <>

Can you provide a bit more information about what you want to do with the network? Are you looking to find a structure? Or produce a graph of the network at the end?

The connectivity restraints may be something you want to look at core::ConnectivityRestraint and core::MSConnectivityRestraint and atom::create_connectivity_restraint().

On Thu, Oct 31, 2013 at 10:13 PM, Hongzhu Cui <" target="_blank">> wrote:

Hi, all,Â

Recently, I have a project with IMP. Basically, we need to represent a protein-protein interaction network in IMP, and then we add some restraints to see how we could optimize this network. But I stuck on this problem, and I did not find any similar example in the Manual documentation.

Thanks & Regards,
Hongzhu

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