Re: [IMP-users] Question about conditional restraints

I was having a look at the ambiguity wiki page (http://salilab.org/imp/wiki/Ambiguity). It states that certain edges can be explicitly disallowed, but I was able to find a method to do it in the ConnectivityRestraint doc page. It it possible to disallow certain edges or is it a functionality not yet implemented?

On Feb 1, 2011, at 7:25 PM, Daniel Russel wrote:

Check out the ConnectivityRestraint. It is very general, so not the easiest thing to use though. There is an example at <http://salilab.org/imp/nightly/doc/html/core_examples.html> (for some reason the links from classes to the examples using them are broken at the moment).

There is also a wiki page talking about the various options: <http://salilab.org/imp/wiki/Ambiguity>

On Feb 1, 2011, at 9:18 AM, Davide Bau wrote:

Hi everyone,

I need to implement a conditional restraint to account for multiple copies of the same particles in my data set, ie to account for interaction ambiguity. Are conditional restraints implemented in IMP?

Thanks!
Davide

--
Davide Baù
Structural Genomics Unit
Bioinformatics & Genomics Department, Prince Felipe Research Center
Avda. Autopista del Saler 16, 46012 Valencia, Spain
Tel: +34 96 328 96 80 (ext. 1004) Fax: +34 96 328 97 01
email: " target="_blank"> web: http://bioinfo.cipf.es/dbau/

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