domino_particle_states.h

Go to the documentation of this file.

/**
 *  \file IMP/em2d/domino_particle_states.h
 *  \brief Particles states for a rigid body that is going to be
 *projected
 *
 *  Copyright 2007-2018 IMP Inventors. All rights reserved.
 *
 */

#ifndef IMPEM2D_DOMINO_PARTICLE_STATES_H
#define IMPEM2D_DOMINO_PARTICLE_STATES_H

#include "IMP/em2d/Image.h"
#include "IMP/domino/domino_macros.h"
#include "IMP/domino/particle_states.h"
#include "IMP/core/rigid_bodies.h"
#include "IMP/algebra/Vector3D.h"
#include "IMP/algebra/Rotation3D.h"
#include "IMP/Pointer.h"
#include "IMP/base_types.h"
#include "IMP/Particle.h"

IMPEM2D_BEGIN_NAMESPACE

/** States that a set of Particles can have according to their positions
    and orientations in a grid. The orientations also determine the orientation
    of the projections of the particles.
*/
class IMPEM2DEXPORT GridStates : public domino::ParticleStates {

 protected:
  algebra::Vector3Ds positions_;
  algebra::Rotation3Ds orientations_;
  unsigned int number_of_states_;

 public:
  /**
    \param[in] positions Set of positions that the set of particles
               can have in the grid (points of the grid).
    \param[in] orientations Orientations of the particles in in the grid
    \param[in] name
    Note: The number of states considered is positions * orientations, as
          each position can have all orientations.
    \
  */
  GridStates(const algebra::Vector3Ds &positions,
             const algebra::Rotation3Ds &orientations,
             const String &name = "GridStates")
      : domino::ParticleStates(name),
        positions_(positions),
        orientations_(orientations) {
    number_of_states_ = positions_.size() * orientations_.size();
  };

  //! Returns the position corresponding to the state i
  algebra::Vector3D get_position(unsigned int i) const;

  //! Returns the orientation corresponding to the state i
  algebra::Rotation3D get_orientation(unsigned int i) const;

  virtual unsigned int get_number_of_particle_states() const IMP_OVERRIDE;
  virtual void load_particle_state(unsigned int, Particle *) const
      IMP_OVERRIDE;

  IMP_OBJECT_METHODS(GridStates);
};
IMP_OBJECTS(GridStates, GridStatesList);

/** States that a set of Particles can have according to their positions
    and orientations in a grid. The orientations also determine the orientation
    of the projections of the particles.
*/
class IMPEM2DEXPORT ProjectionStates : public GridStates {

 protected:
  Images projections_;

 public:
  /**
    \param[in] positions Set of positions that the set of particles
               can have in the grid (points of the grid).
    \param[in] orientations Orientations of the particles in in the grid
    \param[in] projections of the particles in the given orientations.
               There must be correspondence between the orientations and the
               projections.
    \param[in] name
    \note The number of states considered is positions * orientations, as
          each position can have all orientations.
    \
  */
  ProjectionStates(const algebra::Vector3Ds &positions,
                   const algebra::Rotation3Ds &orientations,
                   const Images &projections,
                   const String &name = "ProjectionStates")
      : GridStates(positions, orientations, name), projections_(projections) {
    number_of_states_ = positions_.size() * orientations_.size();
  };

  //! Returns the projection corresponding to the state i;
  Image *get_projection(unsigned int i) const;

  virtual unsigned int get_number_of_particle_states() const IMP_OVERRIDE;
  virtual void load_particle_state(unsigned int, Particle *) const
      IMP_OVERRIDE;

  IMP_OBJECT_METHODS(ProjectionStates);
};
IMP_OBJECTS(ProjectionStates, ProjectionStatesList);

IMPEM2D_END_NAMESPACE

#endif /* IMPEM2D_DOMINO_PARTICLE_STATES_H */