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IMP Reference Guide
2.8.0
The Integrative Modeling Platform
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Classes for attaching metadata to PMI objects. More...
Classes for attaching metadata to PMI objects.
Classes | |
| class | Citation |
| A publication that describes the modeling. More... | |
| class | ComparativeModelDataset |
| A 3D structure determined by comparative modeling. More... | |
| class | CXMSDataset |
| Processed crosslinks from a CX-MS experiment. More... | |
| class | DatabaseLocation |
| A dataset stored in an official database (PDB, EMDB, PRIDE, etc.) More... | |
| class | Dataset |
| A set of input data, for example, a crystal structure or EM map. More... | |
| class | EM2DClassDataset |
| 2DEM class average More... | |
| class | EMDBLocation |
| Something stored in the EMDB database. More... | |
| class | EMDensityDataset |
| A 3D electron microscopy dataset. More... | |
| class | EMMicrographsDataset |
| Raw 2D electron micrographs. More... | |
| class | FileLocation |
| An individual file or directory. More... | |
| class | Location |
| Identifies the location where a resource can be found. More... | |
| class | MassIVELocation |
| Something stored in the MassIVE database. More... | |
| class | MassSpecDataset |
| Raw mass spectrometry files such as peaklists. More... | |
| class | Metadata |
| Base class for all metadata. More... | |
| class | PDBDataset |
| An experimentally-determined 3D structure as a set of a coordinates, usually in a PDB file. More... | |
| class | PDBLocation |
| Something stored in the PDB database. More... | |
| class | PythonScript |
| A Python script used as part of the modeling. More... | |
| class | Repository |
| A repository containing modeling files. More... | |
| class | RootMetadata |
| Metadata that only makes sense for the top-level PMI object. More... | |
| class | Software |
| Software (other than IMP) used as part of the modeling protocol. More... | |