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IMP Reference Guide
2.8.0
The Integrative Modeling Platform
IMP Manual
Reference Guide
Modules
Classes
Examples
include
IMP
display
version 2.8.0
PymolWriter.h
Go to the documentation of this file.
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/**
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* \file IMP/display/PymolWriter.h
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* \brief Write a CGO file with the geometry.
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*
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* Copyright 2007-2017 IMP Inventors. All rights reserved.
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*/
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#ifndef IMPDISPLAY_PYMOL_WRITER_H
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#define IMPDISPLAY_PYMOL_WRITER_H
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#include <IMP/display/display_config.h>
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#include "
writer_macros.h
"
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#include <
IMP/PairContainer.h
>
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#include <
IMP/SingletonContainer.h
>
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#include <
IMP/display/Writer.h
>
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IMPDISPLAY_BEGIN_NAMESPACE
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//! Write a CGO file with the geometry
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/** The CGO file format is a simple format for displaying geometry in Pymol.
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The CGO writer supports points, spheres, cylinders, and segments.
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The file name should end in ".pym".
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The geometry is assembled into objects in pymol based on the passed
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names. For example, all geometry named "box" becomes one pymol object.
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If many files are loaded into Python defining the same objects, they
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become sequential frames in a movie. The frame numbers are determined
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sequentially from the file load order (so they can form a subset of
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the generated files).
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This writer will write many frames to the same file.
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*/
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class
IMPDISPLAYEXPORT
PymolWriter
:
public
TextWriter
{
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std::string lastname_;
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int
last_frame_;
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enum
Type {
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NONE
= 0,
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LINES,
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TRIANGLES,
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OTHER
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};
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Type open_type_;
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friend
class
CGOAnimationWriter;
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void
setup(std::string name, Type type,
bool
opendata =
true
);
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void
cleanup(std::string name,
bool
close =
true
);
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bool
handle_sphere(
SphereGeometry
*g,
Color
color, std::string name);
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bool
handle_cylinder(
CylinderGeometry
*g,
Color
color, std::string name);
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bool
handle_point(
PointGeometry
*g,
Color
color, std::string name);
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bool
handle_segment(
SegmentGeometry
*g,
Color
color, std::string name);
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bool
handle_polygon(
PolygonGeometry
*g,
Color
color, std::string name);
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bool
handle_triangle(
TriangleGeometry
*g,
Color
color, std::string name);
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bool
handle_label(
LabelGeometry
*g,
Color
color, std::string name);
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bool
handle_surface(
SurfaceMeshGeometry
*g,
Color
color, std::string name);
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void
do_set_frame
();
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public
:
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IMP_TEXT_WRITER
(
PymolWriter
);
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};
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IMPDISPLAY_END_NAMESPACE
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#endif
/* IMPDISPLAY_PYMOL_WRITER_H */
IMP::display::Color
Represent an RGB color.
Definition:
Color.h:24
SingletonContainer.h
A container for Singletons.
IMP::display::SegmentGeometry
Display a segment.
Definition:
primitive_geometries.h:47
IMP::display::SurfaceMeshGeometry
Display a surface mesh.
Definition:
primitive_geometries.h:87
IMP::display::PointGeometry
Display a point.
Definition:
primitive_geometries.h:43
IMP::display::TriangleGeometry
Display a triangle.
Definition:
primitive_geometries.h:56
writer_macros.h
macros for display classes
PairContainer.h
A container for Pairs.
IMP::display::SphereGeometry
Display a sphere.
Definition:
primitive_geometries.h:32
IMP::display::TextWriter::do_set_frame
virtual void do_set_frame()
in case you want to take action on a new frame
Writer.h
Base class for writing geometry to a file.
IMP::NONE
Definition:
enums.h:57
IMP::display::TextWriter
Definition:
Writer.h:92
IMP::display::CylinderGeometry
Display a cylinder.
Definition:
primitive_geometries.h:36
IMP::display::PolygonGeometry
Definition:
primitive_geometries.h:52
IMP::display::PymolWriter
Write a CGO file with the geometry.
Definition:
PymolWriter.h:34
IMP_TEXT_WRITER
#define IMP_TEXT_WRITER(Name)
Define information for an TextWriter object.
Definition:
writer_macros.h:18
IMP::display::LabelGeometry
A text label for a ball in space.
Definition:
primitive_geometries.h:71