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IMP Reference Guide
2.6.2
The Integrative Modeling Platform
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A base class for clustering results where each item is in one cluster. More...
#include <IMP/statistics/PartitionalClustering.h>
Inheritance diagram for IMP::statistics::PartitionalClustering:A base class for clustering results where each item is in one cluster.
Data items are represented by an index. In a partitional clustering each item can only be contained on one cluster. The indexes used refer to the index used in the Metric or Embedding used to generate the clustering.
Definition at line 25 of file PartitionalClustering.h.
Public Member Functions | |
| PartitionalClustering (std::string name) | |
| virtual const Ints & | get_cluster (unsigned int cluster_index) const =0 |
| Return the list of indexes in the ith cluster. More... | |
| virtual int | get_cluster_representative (unsigned int cluster_index) const =0 |
| Return the index of an item that "typifies" the ith cluster. More... | |
| virtual unsigned int | get_number_of_clusters () const =0 |
| Public Member Functions inherited from IMP::Object | |
| virtual void | clear_caches () |
| CheckLevel | get_check_level () const |
| LogLevel | get_log_level () const |
| virtual VersionInfo | get_version_info () const |
| Get information about the module and version of the object. More... | |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
| virtual std::string | get_type_name () const |
Additional Inherited Members | |
| Protected Member Functions inherited from IMP::Object | |
| Object (std::string name) | |
| Construct an object with the given name. More... | |
| virtual void | do_destroy () |
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pure virtual |
Return the list of indexes in the ith cluster.
Implemented in IMP::statistics::PartitionalClusteringWithCenter.
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pure virtual |
Return the index of an item that "typifies" the ith cluster.
Implemented in IMP::statistics::PartitionalClusteringWithCenter.
