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IMP Reference Guide
2.6.1
The Integrative Modeling Platform
IMP Manual
Reference Guide
Modules
Classes
Examples
doc
examples
core
custom_hierarchy.py
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## \example core/custom_hierarchy.py
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# This example shows how to create and use a custom hierarchy of particles.
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4
import
IMP
5
import
IMP.core
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import
sys
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IMP.setup_from_argv
(sys.argv,
"custom hierarchy"
)
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def
custom_hierarchy(parent_particle, children_particles):
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tr =
IMP.core.HierarchyTraits
(
"my hierarchy"
)
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pd =
IMP.core.Hierarchy.setup_particle
(parent_particle, tr)
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for
p
in
children_particles:
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cd =
IMP.core.Hierarchy.setup_particle
(p, tr)
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pd.add_child(cd)
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pd.show()
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m =
IMP.Model
()
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p1 =
IMP.Particle
(m)
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p2 =
IMP.Particle
(m)
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p3 =
IMP.Particle
(m)
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custom_hierarchy(p1, (p2, p3))
IMP::setup_from_argv
Strings setup_from_argv(const Strings &argv, std::string description, std::string positional_description, int num_positional)
IMP::Model
Class for storing model, its restraints, constraints, and particles.
Definition:
Model.h:72
IMP::core::Hierarchy::setup_particle
static Hierarchy setup_particle(Model *m, ParticleIndex pi, DecoratorTraits tr=get_default_decorator_traits())
Definition:
core/Hierarchy.h:98
IMP::core::HierarchyTraits
Define the type for a type of hierarchy.
Definition:
core/Hierarchy.h:47
IMP::core
Basic functionality that is expected to be used by a wide variety of IMP users.
custom_hierarchy
Definition:
custom_hierarchy.py:1
IMP::Particle
Class to handle individual model particles.
Definition:
Particle.h:37