IMP Reference Guide
2.6.1
The Integrative Modeling Platform
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This class creates a restraint between consecutive TempResidue objects OR an entire PMI MOlecule object. More...
Inherits object.
This class creates a restraint between consecutive TempResidue objects OR an entire PMI MOlecule object.
Definition at line 20 of file stereochemistry.py.
Public Member Functions | |
def | __init__ |
def | get_num_restraints |
Returns number of connectivity restraints. More... | |
def IMP.pmi.restraints.stereochemistry.ConnectivityRestraint.__init__ | ( | self, | |
objects, | |||
scale = 1.0 , |
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disorderedlength = False , |
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upperharmonic = True , |
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resolution = 1 |
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) |
objects | - a list of hierarchies, PMI TempResidues OR a single Molecule |
scale | - Riccardo knows what this is |
disorderedlength | - This flag uses either disordered length calculated for random coil peptides (True) or zero surface-to-surface distance between beads (False) as optimal distance for the sequence connectivity restraint. |
upperharmonic | - This flag uses either harmonic (False) or upperharmonic (True) in the intra-pair connectivity restraint. resolution The resolution to connect things at - only used if you pass PMI objects |
Definition at line 32 of file stereochemistry.py.
def IMP.pmi.restraints.stereochemistry.ConnectivityRestraint.get_num_restraints | ( | self | ) |
Returns number of connectivity restraints.
Definition at line 152 of file stereochemistry.py.