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IMP Reference Guide  2.6.1
The Integrative Modeling Platform
IMP.pmi.io.crosslink.ResiduePairListParser Class Reference

A class to handle different styles of site pairs parsers. More...

Inherits _CrossLinkDataBaseStandardKeys.

Detailed Description

A class to handle different styles of site pairs parsers.

Implemented styles: MSSTUDIO: [Y3-S756;Y3-K759;K4-S756;K4-K759] for crosslinks [Y3-;K4-] for dead-ends QUANTITATION: sp|P33298|PRS6B_YEAST:280:x:sp|P33298|PRS6B_YEAST:337

Note
This class is only available in Python.

Definition at line 269 of file crosslink.py.

Public Member Functions

def get_list
 This function returns a list of cross-linked residues and the corresponding list of cross-linked chains. More...
 

Member Function Documentation

def IMP.pmi.io.crosslink.ResiduePairListParser.get_list (   self,
  input_string 
)

This function returns a list of cross-linked residues and the corresponding list of cross-linked chains.

The latter list can be empty, if the style doesn't have the corresponding information.

Definition at line 295 of file crosslink.py.


The documentation for this class was generated from the following file: