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IMP Reference Guide
2.6.1
The Integrative Modeling Platform
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Store a ParticleIndexQuads. More...
#include <IMP/container/DynamicListQuadContainer.h>
Inheritance diagram for IMP::container::DynamicListQuadContainer:Store a ParticleIndexQuads.
In contrast to ListQuadContainer, this list is designed to act as the output of a ScoreState or another container. The key difference is that it uses the passed Container to define the list of all possible contents of the container.
Definition at line 27 of file DynamicListQuadContainer.h.
Public Member Functions | |
| DynamicListQuadContainer (Container *scope, std::string name="ListQuadContainer %1%") | |
| virtual std::string | get_type_name () const |
| virtual ::IMP::VersionInfo | get_version_info () const |
| Get information about the module and version of the object. More... | |
| Public Member Functions inherited from IMP::QuadContainer | |
| void | apply (const QuadModifier *sm) const |
| Apply a SingletonModifier to the contents. More... | |
| void | apply_generic (const QuadModifier *m) const |
| Just use apply() in the base class. More... | |
| const ParticleIndexQuads & | get_contents () const |
| virtual ParticleIndexQuads | get_indexes () const =0 |
| ParticleQuad | get_particle_quad (unsigned int i) const |
| ParticleQuadsTemp | get_particle_quads () const |
| virtual ParticleIndexQuads | get_range_indexes () const =0 |
| Public Member Functions inherited from IMP::Container | |
| ModelObjectsTemp | do_get_outputs () const |
| containers don't have outputs More... | |
| virtual ParticleIndexes | get_all_possible_indexes () const =0 |
| Get contained particles. More... | |
| std::size_t | get_contents_hash () const |
| virtual bool | get_is_decomposable () const |
| Public Member Functions inherited from IMP::ModelObject | |
| ModelObject (Model *m, std::string name) | |
| bool | get_has_dependencies () const |
| Return whether this object has dependencies computed. More... | |
| bool | get_has_required_score_states () const |
| Return whether score states are computed. More... | |
| ModelObjectsTemp | get_inputs () const |
| ModelObjectsTemps | get_interactions () const |
| Get the interacting sets induced by this ModelObject. More... | |
| Model * | get_model () const |
| ModelObjectsTemp | get_outputs () const |
| const ScoreStatesTemp & | get_required_score_states () const |
| Get the score states that are ancestors of this in the dependency graph. More... | |
| void | set_has_dependencies (bool tf) |
| Either invalidate the dependencies or ensure they are correct. More... | |
| void | set_has_required_score_states (bool tf) |
| Compute the required score states. More... | |
| Public Member Functions inherited from IMP::Object | |
| virtual void | clear_caches () |
| CheckLevel | get_check_level () const |
| LogLevel | get_log_level () const |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Methods to control the contained objects | |
This container stores a list of Quad objects. To manipulate the list use these methods. | |
| void | add (const ParticleIndexQuad &vt) |
| Add a single const ParticleIndexQuad& to the container. More... | |
| void | add (const ParticleIndexQuads &c) |
| Add ParticleIndexQuads to the container. More... | |
| void | set (ParticleIndexQuads cp) |
| Set the contents of the container to the given ParticleIndexQuads. More... | |
| void | clear () |
| Clear the contents of the container. More... | |
| void | add_particle_quad (const ParticleQuad &vt) |
| void | add_particle_quads (const ParticleQuadsTemp &c) |
| void | set_particle_quads (ParticleQuadsTemp c) |
| void | clear_particle_quads () |
Additional Inherited Members | |
| Public Types inherited from IMP::QuadContainer | |
| typedef ParticleIndexQuad | ContainedIndexType |
| typedef ParticleIndexQuads | ContainedIndexTypes |
| typedef ParticleQuad | ContainedType |
| typedef ParticleQuadsTemp | ContainedTypes |
| typedef QuadModifier | Modifier |
| typedef const ParticleIndexQuad & | PassContainedIndexType |
| Protected Member Functions inherited from IMP::QuadContainer | |
| QuadContainer (Model *m, std::string name="QuadContainer %1%") | |
| virtual void | do_apply (const QuadModifier *sm) const =0 |
| virtual bool | do_get_provides_access () const |
| Protected Member Functions inherited from IMP::Container | |
| Container (Model *m, std::string name="Container %1%") | |
| virtual std::size_t | do_get_contents_hash () const =0 |
| Protected Member Functions inherited from IMP::ModelObject | |
| virtual ModelObjectsTemp | do_get_inputs () const =0 |
| virtual ModelObjectsTemps | do_get_interactions () const |
| virtual void | handle_set_has_required_score_states (bool) |
| Protected Member Functions inherited from IMP::Object | |
| Object (std::string name) | |
| Construct an object with the given name. More... | |
| virtual void | do_destroy () |
| IMP::container::DynamicListQuadContainer::DynamicListQuadContainer | ( | Container * | scope, |
| std::string | name = "ListQuadContainer %1%" |
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| ) |
Constructs the dynamic list
| scope | a container with a list of all possible particles that are allowed to be dynamically added or removed in this container |
| name | the name of this container |
| void IMP::container::DynamicListQuadContainer::add | ( | const ParticleIndexQuad & | vt | ) |
Add a single const ParticleIndexQuad& to the container.
| void IMP::container::DynamicListQuadContainer::add | ( | const ParticleIndexQuads & | c | ) |
Add ParticleIndexQuads to the container.
| void IMP::container::DynamicListQuadContainer::add_particle_quad | ( | const ParticleQuad & | vt | ) |
| void IMP::container::DynamicListQuadContainer::add_particle_quads | ( | const ParticleQuadsTemp & | c | ) |
| void IMP::container::DynamicListQuadContainer::clear | ( | ) |
Clear the contents of the container.
| void IMP::container::DynamicListQuadContainer::clear_particle_quads | ( | ) |
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virtual |
Get information about the module and version of the object.
Reimplemented from IMP::Object.
Definition at line 90 of file DynamicListQuadContainer.h.
| void IMP::container::DynamicListQuadContainer::set | ( | ParticleIndexQuads | cp | ) |
Set the contents of the container to the given ParticleIndexQuads.
| void IMP::container::DynamicListQuadContainer::set_particle_quads | ( | ParticleQuadsTemp | c | ) |