coarse_molecule.h File Reference

coarsen molecule by clustering More...

#include <IMP/atom/Hierarchy.h>
#include <IMP/em/DensityMap.h>
#include <IMP/multifit/multifit_config.h>

Include dependency graph for coarse_molecule.h:

This graph shows which files directly or indirectly include this file:

Go to the source code of this file.

Namespaces
	IMP
	Base functionality and abstract base classes for representation, scoring and sampling.
	IMP::multifit
	Fitting atomic structures into a cryo-electron microscopy density map.

Functions
atom::Hierarchy	IMP::multifit::create_coarse_molecule_from_density (em::DensityMap *dmap, float dens_threshold, int num_beads, Model *mdl, float bead_radius)
	Coarsen a density map based on voxels clustering. More...
atom::Hierarchy	IMP::multifit::create_coarse_molecule_from_molecule (const atom::Hierarchy &mh, int num_beads, Model *mdl, float bead_radius, bool add_conn_restraint=false)
	Coarsen a molecule based on atom clustering. More...
atom::Hierarchies	IMP::multifit::create_coarse_molecules_from_molecules (const atom::Hierarchies &mhs, int frag_len, Model *mdl, float bead_radius, bool add_conn_restraint=false)
	Coarsen molecules based on atom clustering. More...

Detailed Description

coarsen molecule by clustering

Copyright 2007-2015 IMP Inventors. All rights reserved.

Definition in file coarse_molecule.h.