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IMP Reference Guide  2.5.0
The Integrative Modeling Platform
coarse_molecule.h File Reference

coarsen molecule by clustering More...

#include <IMP/atom/Hierarchy.h>
#include <IMP/em/DensityMap.h>
#include <IMP/multifit/multifit_config.h>
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Namespaces

 IMP
 Base functionality and abstract base classes for representation, scoring and sampling.
 
 IMP::multifit
 Fitting atomic structures into a cryo-electron microscopy density map.
 

Functions

atom::Hierarchy IMP::multifit::create_coarse_molecule_from_density (em::DensityMap *dmap, float dens_threshold, int num_beads, Model *mdl, float bead_radius)
 Coarsen a density map based on voxels clustering. More...
 
atom::Hierarchy IMP::multifit::create_coarse_molecule_from_molecule (const atom::Hierarchy &mh, int num_beads, Model *mdl, float bead_radius, bool add_conn_restraint=false)
 Coarsen a molecule based on atom clustering. More...
 
atom::Hierarchies IMP::multifit::create_coarse_molecules_from_molecules (const atom::Hierarchies &mhs, int frag_len, Model *mdl, float bead_radius, bool add_conn_restraint=false)
 Coarsen molecules based on atom clustering. More...
 

Detailed Description

coarsen molecule by clustering

Copyright 2007-2015 IMP Inventors. All rights reserved.

Definition in file coarse_molecule.h.