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kernel/TripletModifier.h
Go to the documentation of this file.
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/**
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* \file IMP/kernel/TripletModifier.h
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* \brief A Modifier on kernel::ParticleTripletsTemp
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*
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* WARNING This file was generated from TripletModifier.h
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* in /tmp/nightly-build-29065/imp-2.3.1/tools/build/container_templates/kernel
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* by tools/build/make_containers.py.
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*
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* Copyright 2007-2014 IMP Inventors. All rights reserved.
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*/
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#ifndef IMPKERNEL_TRIPLET_MODIFIER_H
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#define IMPKERNEL_TRIPLET_MODIFIER_H
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#include <IMP/kernel/kernel_config.h>
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#include "
DerivativeAccumulator.h
"
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#include "
base_types.h
"
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#include "
ParticleTuple.h
"
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#include "internal/container_helpers.h"
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#include "
model_object_helpers.h
"
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IMPKERNEL_BEGIN_NAMESPACE
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//! A base class for modifiers of kernel::ParticleTripletsTemp
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/** The primary function of such a class is to change
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the passed particles.
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\see IMP::TripletFunctor
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Implementors should see IMP_TRIPLET_MODIFIER(). Also see
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TripletDerivativeModifier.
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*/
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class
IMPKERNELEXPORT
TripletModifier
:
public
ParticleInputs
,
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public
ParticleOutputs
,
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public
base::Object
{
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public
:
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typedef
kernel::ParticleTriplet
Argument
;
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typedef
kernel::ParticleIndexTriplet
IndexArgument
;
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TripletModifier
(std::string name =
"TripletModifier %1%"
);
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/** \deprecated_at{2.1} use the index version instead*/
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IMPKERNEL_DEPRECATED_METHOD_DECL(2.1)
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virtual
void
apply(
const
kernel::ParticleTriplet
& vt)
const
;
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/** Apply the function to a single value*/
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virtual
void
apply_index(
kernel::Model
*m,
const
kernel::ParticleIndexTriplet
& v)
const
;
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/** Apply the function to a collection of kernel::ParticleTripletsTemp */
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/** If bounds are passed, only apply to ones between the upper and
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lower bounds.*/
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virtual
void
apply_indexes
(
kernel::Model
*m,
const
kernel::ParticleIndexTriplets
&o,
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unsigned
int
lower_bound,
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unsigned
int
upper_bound)
const
{
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for
(
unsigned
int
i = lower_bound; i < upper_bound; ++i) {
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apply_index(m, o[i]);
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}
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}
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};
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IMPKERNEL_END_NAMESPACE
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#endif
/* IMPKERNEL_TRIPLET_MODIFIER_H */
DerivativeAccumulator.h
Class for adding derivatives from restraints to the model.
IMP::kernel::TripletModifier
A base class for modifiers of kernel::ParticleTripletsTemp.
Definition:
kernel/TripletModifier.h:33
base_types.h
Basic types used by IMP.
IMP::TripletModifier
IMP::kernel::TripletModifier TripletModifier
Definition:
kernel/doxygen.h:242
IMP::base::Vector< ParticleIndexTriplet >
model_object_helpers.h
Single variable function.
IMP::base::Array
A class to store an fixed array of same-typed values.
Definition:
Array.h:33
IMP::kernel::ParticleOutputs
Definition:
kernel/model_object_helpers.h:41
IMP::kernel::ParticleInputs
Definition:
kernel/model_object_helpers.h:18
IMP::base::Object
Common base class for heavy weight IMP objects.
Definition:
Object.h:106
ParticleTuple.h
Classes to handle individual model particles.
IMP::kernel::TripletModifier::apply_indexes
virtual void apply_indexes(kernel::Model *m, const kernel::ParticleIndexTriplets &o, unsigned int lower_bound, unsigned int upper_bound) const
Definition:
kernel/TripletModifier.h:51
IMP::kernel::Model
Class for storing model, its restraints, constraints, and particles.
Definition:
kernel/Model.h:73