FitRestraintBayesEM3D.h File Reference

Calculate the Bayesian score and derivative based on fit to an EM density map. This restraint differs from em::FitRestraint because it does not use a cross_correlation_coefficient as score but a Bayesian similarity measure. More...

#include <IMP/Model.h>
#include <IMP/Refiner.h>
#include <IMP/Restraint.h>
#include <IMP/atom/Atom.h>
#include <IMP/atom/Hierarchy.h>
#include <IMP/atom/Mass.h>
#include <IMP/core/XYZR.h>
#include <IMP/em/em_config.h>
#include <boost/unordered_map.hpp>
#include "BayesEM3D.h"
#include "DensityMap.h"
#include "SampledDensityMap.h"

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Classes
class	IMP::em::FitRestraintBayesEM3D
	Calculate score based on fit to EM map. More...

Namespaces
	IMP
	Base functionality and abstract base classes for representation, scoring and sampling.
	IMP::em
	Basic utilities for handling cryo-electron microscopy 3D density maps.

Detailed Description

Calculate the Bayesian score and derivative based on fit to an EM density map. This restraint differs from em::FitRestraint because it does not use a cross_correlation_coefficient as score but a Bayesian similarity measure.

Copyright 2007-2020 IMP Inventors. All rights reserved.

Definition in file FitRestraintBayesEM3D.h.