IMP Reference Guide
2.20.2
The Integrative Modeling Platform
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This is the complete list of members for IMP::multifit::FFTFitting, including all inherited members.
asmb_norm_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
best_fits_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
best_trans_per_rot_log_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
cen_trans_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
clear_caches() | IMP::Object | virtual |
copy_density_data(em::DensityMap *dmap, double *data_array) (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
copy_mol_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
corr_mode_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
crop_margin(em::DensityMap *in_map) (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
detect_top_fits(const internal::RotScoresVec &rot_scores, bool cluster_fits, double max_translation, double max_clustering_trans, double max_clustering_rotation) | IMP::multifit::FFTFitting | protected |
do_destroy() | IMP::Object | protectedvirtual |
do_global_fitting(em::DensityMap *dmap, double density_threshold, atom::Hierarchy mol2fit, double angle_sampling_interval_rad, int num_fits_to_report, double max_clustering_translation, double max_clustering_angle, bool cluster_fits=true, int num_angle_per_voxel=1, const std::string &angles_filename="") | IMP::multifit::FFTFitting | |
do_local_fitting(em::DensityMap *dmap, double density_threshold, atom::Hierarchy mol2fit, double angle_sampling_interval_rad, double max_angle_sampling_rad, double max_translation, int num_fits_to_report, bool cluster_fits, int num_angle_per_voxel, double max_clustering_translation, double max_clustering_rotation, const std::string &angles_filename="") | IMP::multifit::FFTFitting | |
fft_scores_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fft_scores_flipped_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
FFTFitting() (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | |
fftw_grid_hi_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_grid_lo_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_nvox_c2r_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_nvox_r2c_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_pad_factor_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_plan_forward_hi_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_plan_forward_lo_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_plan_reverse_hi_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_r_grid_mol_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_scale_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_translational_search(const multifit::internal::EulerAngles &rot, int i) (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fftw_zero_padding_extent_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
filtered_kernel_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
filtered_kernel_ext_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
fits_hash_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
gauss_kernel_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
gauss_kernel_ext_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
gauss_kernel_nvox_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
get_check_level() const (defined in IMP::Object) | IMP::Object | |
get_log_level() const (defined in IMP::Object) | IMP::Object | |
get_name() const (defined in IMP::Object) | IMP::Object | |
get_type_name() const override (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | virtual |
get_unwrapped_index(int wx, int wy, int wz, int &ix, int &iy, int &iz) (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
get_version_info() const override | IMP::multifit::FFTFitting | virtual |
high_mol_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
inside_num_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
inside_num_flipped_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
kernel_filter_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
kernel_filter_ext_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
low_cutoff_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
low_map_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
low_map_data_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
map_cen_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
margin_ignored_in_conv_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
NonCopyable() (defined in IMP::NonCopyable) | IMP::NonCopyable | protected |
num_angle_per_voxel_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
num_fits_reported_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
nvox_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
nx_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
nx_half_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
ny_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
ny_half_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
nz_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
nz_half_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
Object(std::string name) | IMP::Object | protected |
orig_cen_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
orig_mol_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
orig_mol_copy_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
orig_rb_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
origx_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
origy_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
origz_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
pad_resolution_map() (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
prepare_kernels() (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
prepare_lowres_map(em::DensityMap *dmap) (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
prepare_poslist(em::DensityMap *dmap) (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
prepare_poslist_flipped(em::DensityMap *dmap) (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
prepare_probe(atom::Hierarchy mol2fit) (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
resolution_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
reversed_fftw_data_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
rots_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
sampled_map_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
sampled_map_data_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
sampled_norm_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
set_check_level(CheckLevel l) | IMP::Object | |
set_log_level(LogLevel l) | IMP::Object | |
set_name(std::string name) (defined in IMP::Object) | IMP::Object | |
set_was_used(bool tf) const | IMP::Object | |
show(std::ostream &out=std::cout) const (defined in IMP::Object) | IMP::Object | |
spacing_ (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | protected |
~FFTFitting() (defined in IMP::multifit::FFTFitting) | IMP::multifit::FFTFitting | virtual |
~Object() (defined in IMP::Object) | IMP::Object | virtual |