Argument typedef (defined in IMP::PairScore) | IMP::PairScore | |
clear_caches() | IMP::Object | virtual |
create_current_decomposition(Model *m, const ParticleIndexPair &vt) const | IMP::PairScore | |
DistancePairScore(const DistanceScore &t0, std::string name="FunctorDistancePairScore %1%") (defined in IMP::score_functor::DistancePairScore< score_functor::LoopStatistical >) | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | |
DistancePairScore() (defined in IMP::score_functor::DistancePairScore< score_functor::LoopStatistical >) | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | |
DistanceScore typedef (defined in IMP::score_functor::DistancePairScore< score_functor::LoopStatistical >) | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | |
do_create_current_decomposition(Model *m, const ParticleIndexPair &vt) const | IMP::PairScore | protectedvirtual |
do_destroy() | IMP::Object | protectedvirtual |
do_get_inputs(Model *m, const ParticleIndexes &pis) const override | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | virtual |
evaluate_if_good_index(Model *m, const ParticleIndexPair &vt, DerivativeAccumulator *da, double max) const | IMP::PairScore | virtual |
evaluate_if_good_indexes(Model *m, const ParticleIndexPairs &p, DerivativeAccumulator *da, double max, unsigned int lower_bound, unsigned int upper_bound) const override | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | virtual |
evaluate_index(Model *m, const ParticleIndexPair &pip, DerivativeAccumulator *da) const override | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | virtual |
evaluate_indexes(Model *m, const ParticleIndexPairs &p, DerivativeAccumulator *da, unsigned int lower_bound, unsigned int upper_bound) const overridefinal | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | virtual |
evaluate_indexes_delta(Model *m, const ParticleIndexPairs &p, DerivativeAccumulator *da, const std::vector< unsigned > &indexes, std::vector< double > &score) const overridefinal | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | virtual |
evaluate_indexes_scores(Model *m, const ParticleIndexPairs &p, DerivativeAccumulator *da, unsigned int lower_bound, unsigned int upper_bound, std::vector< double > &score) const overridefinal | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | virtual |
get_check_level() const (defined in IMP::Object) | IMP::Object | |
get_inputs(Model *m, const ParticleIndexes &pis) const | IMP::ParticleInputs | |
get_log_level() const (defined in IMP::Object) | IMP::Object | |
get_name() const (defined in IMP::Object) | IMP::Object | |
get_score_functor() | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | |
get_type_name() const override (defined in IMP::score_functor::DistancePairScore< score_functor::LoopStatistical >) | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | virtual |
get_version_info() const override | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | virtual |
IndexArgument typedef (defined in IMP::PairScore) | IMP::PairScore | |
LoopStatisticalPairScore(double threshold=std::numeric_limits< double >::max()) (defined in IMP::atom::LoopStatisticalPairScore) | IMP::atom::LoopStatisticalPairScore | |
LoopStatisticalPairScore(double threshold, TextInput data_file) (defined in IMP::atom::LoopStatisticalPairScore) | IMP::atom::LoopStatisticalPairScore | |
Modifier typedef (defined in IMP::PairScore) | IMP::PairScore | |
NonCopyable() (defined in IMP::NonCopyable) | IMP::NonCopyable | protected |
Object(std::string name) | IMP::Object | protected |
PairScore(std::string name="PairScore %1%") (defined in IMP::PairScore) | IMP::PairScore | |
PassArgument typedef (defined in IMP::PairScore) | IMP::PairScore | |
PassIndexArgument typedef (defined in IMP::PairScore) | IMP::PairScore | |
set_check_level(CheckLevel l) | IMP::Object | |
set_log_level(LogLevel l) | IMP::Object | |
set_name(std::string name) (defined in IMP::Object) | IMP::Object | |
set_was_used(bool tf) const | IMP::Object | |
show(std::ostream &out=std::cout) const (defined in IMP::Object) | IMP::Object | |
~DistancePairScore() (defined in IMP::score_functor::DistancePairScore< score_functor::LoopStatistical >) | IMP::score_functor::DistancePairScore< score_functor::LoopStatistical > | virtual |
~Object() (defined in IMP::Object) | IMP::Object | virtual |
~ParticleInputs() (defined in IMP::ParticleInputs) | IMP::ParticleInputs | protectedvirtual |