add_residue(CHARMMResidueTopology *obj) (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
add_residues(const CHARMMResidueTopologies &objs) (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
apply_default_patches(const CHARMMParameters *ff) | IMP::atom::CHARMMSegmentTopology | |
CHARMMSegmentTopology(std::string name="CHARMM segment topology %1%") (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
clear_caches() | IMP::Object | virtual |
clear_residues() (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
do_destroy() | IMP::Object | protectedvirtual |
erase_residue(unsigned int i) (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
get_check_level() const (defined in IMP::Object) | IMP::Object | |
get_has_residues() (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
get_log_level() const (defined in IMP::Object) | IMP::Object | |
get_name() const (defined in IMP::Object) | IMP::Object | |
get_number_of_residues() const (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
get_residue(unsigned int i) const (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
get_residues() const (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
get_type_name() const override (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | virtual |
get_version_info() const override | IMP::atom::CHARMMSegmentTopology | virtual |
NonCopyable() (defined in IMP::NonCopyable) | IMP::NonCopyable | protected |
Object(std::string name) | IMP::Object | protected |
remove_residue(CHARMMResidueTopology *d) (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
remove_residues(const CHARMMResidueTopologies &d) (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
reserve_residues(unsigned int sz) (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
residues | IMP::atom::CHARMMSegmentTopology | |
set_check_level(CheckLevel l) | IMP::Object | |
set_log_level(LogLevel l) | IMP::Object | |
set_name(std::string name) (defined in IMP::Object) | IMP::Object | |
set_residues(const CHARMMResidueTopologies &ps) (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
set_residues_order(const CHARMMResidueTopologies &objs) (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | |
set_was_used(bool tf) const | IMP::Object | |
show(std::ostream &out=std::cout) const (defined in IMP::Object) | IMP::Object | |
~CHARMMSegmentTopology() (defined in IMP::atom::CHARMMSegmentTopology) | IMP::atom::CHARMMSegmentTopology | virtual |
~Object() (defined in IMP::Object) | IMP::Object | virtual |